NA ----> NA
Intron 1 GTATTAATCT ... TGTTGGCCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 69.41 | 26 | 63 | 55 |
| A2 | 65.85 | 21 | 46 | 35 |
| A3 | 65.13 | 34 | 61 | 66 |
| A4 | 64.1 | 21 | 32 | 43 |
| A5 | 81.82 | 5 | 22 | 23 |
| A6 | 64.73 | 103 | 195 | 183 |
| A7 | 64.06 | 147 | 254 | 270 |
| A8 | 64.04 | 180 | 313 | 328 |
| A9 | 68.07 | 152 | 316 | 332 |
| A10 | 68.78 | 111 | 253 | 236 |
>TRINITY_DN107664_c0_g1_i1 from sample A2 / Example spliced isoformGTTTAACGCGCGCAAGCGTGGAGTCTTTTGCTCAATGATTTGAATATAAGAGACTGGGCAATTAAGAATCTTTTTGTATTTTGTTGTCTAAATATCCCCGGTTTATCCATGTTACTGCACAATTAAAATTTTCTTTGCACACAATTCCTTGCAGTTTGCAGTGATGGAGAACGCTGGTTCAATGGACTTGGAGATTTTCA
AAAACCCCTTTGATATTCCACGAGACGAGCTTATCAGGAAACTTATATACTTACCTGTTCGAGTGGCAACGGCATTAGAGAATCGTTGTGCACAGGCTACAGGGCAAAGGATGAGGAAGATGAAAACACCACTAATTAGTATTCTGGAATCTCGCATAGCAAGCATACAAAAGGAATTGCAAGAATCAGCGCCAACCAAA
AAGGCAGAAGAGTCAGACTACAATAGGCGGTCAATGGGAATTTTGGCTGGCTCCTGTTGCCAAGGAAATAATGATTGTGTAGATGAAGTGTGCGTGGAAGGTGAAATTGGACCCATATCACACCAAGAAAGACATAAACGGCACCTGGAGTCTCCTGTAGGGGGATTGGCAGCGGAAGAACTAAAAGAGAGGAGTGATGG
TGTCACTGATGGAAGTAACAAAAGGAAGAGAGTTGAAGAGAAATTTAGAGAGAATCATTGTAAAAGTACTTTATCTGAAGATAATTCTTCACCTAGAGTAACCCCTCCAGTTACAAGGATGGAAACTAAGAAGCAAACAGATTTTTTCATATCAACAATACGGGTTCTACGCAATGTAAAATCAAATCAATCAAAGGAGC
TCTTTGATATATTGTCTTCCCCCAATCTCCCTGTGAAGAAGGCACATCTTGTGGAGCAACTAATTTGGATGGCACAAGAGTACAACAAGAAAACATTGGCTGAAGAGTTAATGAAATACCAGTAGATGGGTGTGCCTCAAGCTCATATCTGAACTGCTGCTATCAGAGTCAAGCAGCTGTCATAGGAGCACCGTAAATTC
ATTGGTAATCTCAGTATATTGGCCAAGATCAACTATCACTAACAGGGCTGCTTGCTCATCCAGTTGAGGTGACTGTTGGTTGCTCGTTAACAAGTTTAGAAGTCGGAAATATATTTAAAACCATCTGATTTGCATGGAATATTTTGTTTATTCATCGGAACATCAGTGGAAGTAGCTGTCAAAATATTGGAATCTTCTGA
GGATTGATGATGTTTTCTAGTGGGAGATCTCCTAGTGTAGTTTTTAACCGGTCTTTGTAAAACATACACATTTATCTTCAAATTGGTGCTGAAAATTTAAGGTGTTAAATTCATCAATTGACATGGTGCCATGGGACTAATTCTGCTCATGTTGACTTTCAATTAATGGACATACAACCAGAGGACTTTCATTTAGGATT
GTTGAATCCATTTTCTGACATGAAAGCAGGCTTCAGTTATGGTCTGATTAAAAACGTCGAGTCAATTTAGTTTAGGATGTTTTATTAGCAC
>TRINITY_DN107664_c0_g1_i2 from sample A2 / Example unspliced isoform:GTTTAACGCGCGCAAGCGTGGAGTCTTTTGCTCAATGATTTGAATATAAGAGACTGGGCAATTAAGAATCTTTTTGTATTTTGTTGTCTAAATATCCCCGGTTTATCCATGTTACTGCACAATTAAAATTTTCTTTGCACACAATTCCTTGCAGTTTGCAGTGATGGAGAACGCTGGTTCAATGGACTTGGAGATTTTCA
AAAACCCCTTTGATATTCCACGAGACGAGCTTATCAGGAAACTTATATACTTACCTGTTCGAGTGGCAACGGCATTAGAGAATCGTTGTGCACAGGCTACAGGGCAAAGGATGAGGAAGATGAAAACACCACTAATTAGTATTCTGGAATCTCGCATAGCAAGCATACAAAAGGAATTGCAAGAATCAGCGCCAACCAAA
AAGGCAGAAGAGTCAGACTACAATAGGCGGTCAATGGGAATTTTGGCTGGCTCCTGTTGCCAAGGAAATAATGATTGTGTAGATGAAGTGTGCGTGGAAGGTGAAATTGGACCCATATCACACCAAGAAAGACATAAACGGCACCTGGAGTCTCCTGTAGGGGGATTGGCAGCGGAAGAACTAAAAGAGAGGAGTGATGG
TGTCACTGATGGAAGTAACAAAAGGAAGAGAGTTGAAGAGAAATTTAGAGAGAATCATTGTAAAAGTACTTTATCTGAAGATAATTCTTCACCTAGAGTAACCCCTCCAGTTACAAGGATGGAAACTAAGAAGCAAACAGATTTTTTCATATCAACAATACGGGTTCTACGCAATGTAAAATCAAATCAATCAAAGGAGC
TCTTTGATATATTGTCTTCCCCCAATCTCCCTGTGAAGAAGGCACATCTTGTGGAGCAACTAATTTGGATGGCACAAGAGTACAACAAGAAAACATTGGCTGAAGAGTTAATGAAATACCAGTAGATGGGTGTGCCTCAAGCTCATATCTGAACTGCTGCTATCAGAGgtattaatcttaatataatggtctgccgtcca
taaattccgtcaggctgcattgtcatgcaactgagctaaaggttgattgctgtgatatgacattctgctgtttctttctaatgttttctgttggccagTCAAGCAGCTGTCATAGGAGCACCGTAAATTCATTGGTAATCTCAGTATATTGGCCAAGATCAACTATCACTAACAGGGCTGCTTGCTCATCCAGTTGAGGT
GACTGTTGGTTGCTCGTTAACAAGTTTAGAAGTCGGAAATATATTTAAAACCATCTGATTTGCATGGAATATTTTGTTTATTCATCGGAACATCAGTGGAAGTAGCTGTCAAAATATTGGAATCTTCTGAGGATTGATGATGTTTTCTAGTGGGAGATCTCCTAGTGTAGTTTTTAACCGGTCTTTGTAAAACATACACA
TTTATCTTCAAATTGGTGCTGAAAATTTAAGGTGTTAAATTCATCAATTGACATGGTGCCATGGGACTAATTCTGCTCATGTTGACTTTCAATTAATGGACATACAACCAGAGGACTTTCATTTAGGATTGTTGAATCCATTTTCTGACATGAAAGCAGGCTTCAGTTATGGTCTGATTAAAAACGTCGAGTCAATTTAG
TTTAGGATGTTTTATTAGCAC