sp|F4IP06|SWC2_ARATH ----> SWR1 complex subunit 2
Intron 1 GTTTGAGCCA ... CATATTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 54.29 | 8 | 7 | 12 |
| A2 | 52.63 | 9 | 6 | 14 |
| A3 | 30.43 | 16 | 3 | 11 |
| A4 | 38.46 | 4 | 2 | 3 |
| A5 | 30 | 7 | 4 | 2 |
| A6 | 83.33 | 1 | 6 | 4 |
| A7 | 42.86 | 16 | 3 | 21 |
| A8 | 45 | 11 | 5 | 13 |
| A9 | 32.2 | 20 | 4 | 15 |
| A10 | 20 | 8 | 1 | 3 |
>TRINITY_DN42385_c0_g1_i4 from sample A7 / Example spliced isoformCGGAAATTTACGAAAAAGTTCCATGGCTTCCAGCTATCGAAGGCATTAGGAAATTAAATGAAATACAGCATCTGAAGGAGACAGAAATTAAGCAAACTCAATACAAATCTAGCAAGTGTTCAAACTTCGGTGGGCTCTAGACGATTATGAGAAGAAGTTGGAAGTCGATGCAAAAAACGACTCACACAGACGGACCGACT
CTTCACTAGCAGTTCCTCGCGCCCGCGACTGTGTAAATAAAGCTTAAAGCAATTTGCCAGGGCTTCGAAAGACACAGCATGCCCACCATCTTTGCAAAATATCTTCCAGCTGGGTCTTACAAATTACCCTATTTTACTGCCCCTGCCCGGTCAATTGAAGTTGTGTTGAAGGAGGAGGAGAGGAGGATAAGCGCAATGGC
TACCATGAACGATCCGCCAGTTATTATTGATCGCACCACTCGCGCCACCCGTGGAAAAAGGATGTCAAAGCTGCTAGATGACGAGCTAGAAAATGATGAACAATTCTGGGGTCAGGATGCCTTCAGAGAGGAAGAAAATGATATTGAATATCAAGAGGAAGGGGACGTGGCTGATGAGTTTGACAGTGACTTTGATGATG
AAGATGAACCTGAACCAGATGAAGAGGTAGCAGATGATGAGGACAGAAGGCCTGTGAAGAAGAGAAAGTTGATTCAAGGAAAGATACTTTTCAAGAAAAAAATCAAAAGGAAGGGGTTTGCCTCTTTAAAGACTGTTCCTGAAACTGTAGAAGGTTCTACCCCTGAATCAAAACCATCCCAGTCCAAACATCAGGAGACT
GCCGGTGATCCAGAAGGTGAAAGGACAGTAAGAAAGTCTACAAGAACAGCAGTTATTGTGCGCCAAGCAGAGCGAGATGCTCTTCGTGCAGCCTTACAATCTTCAATAAAGCCTGTAAAAAGGAAAAGAGAAGGAGAGGAACGGCGGATGACTCAAGAGGAAATGCTTTTAGAAGCTGCACAGACAGAGATCATGAACCT
ACGACATTTGGAAAAAATGCTGGCACGCGAGGAGGAAGTTAAGAAAAAGGCCATTGTCCATAAATCTGTGTACGCAGGCCCACTTATATGTTTTTACTCTAGAGATGGAAAGAATACTCTGGAGTTTACTAAGGTAGCGGCATTTCCATCAGATTTGTTTTCAAAATCTGTTCCCTATCCAGAGCAACCTCTATGTGTTG
TAACGGGGCAACCTGCCAAGTATTGTGACCCAAATACAGGATTGCCATATGCAACAAAGGAGGCTTTCAAAATCATTCGAGAAAGGTTTTCAGAAGCAAACAAACGCAGAGACCGCATCCATATGCAAGACATGGGCCCACTGTTTACTGCAATATCAGGACAAGGATTTGCCAAGAAAGGGAAAAGGTCAAATTCTGGG
AGGGCGAAGTCATCCTCATGTCAACAGAAGGTGGATGATCTGCAGTTAGAGTCAGGGGAACGACTCTTGCCTTCATGTGTGGATAGAAACGAGTCAAGCATTGCTGCTTCTGATGTTAAAAATGATTTACAGGTGAATGTTATATCACACTTGTCTAGATTGCCTACATCGTCAACATTGCCGCAACCAAATTGTGCTGA
GTCATCCCTGGGTGATGATCTTTCTTCAGATGCCAAAATGTTTACTAAAGAAAGATCTATAGCAACACCACAGGCTGGAGGATCAAACCCATCATCTAGTGTTGTACCAGTGCCAGGGCCAGAGACAAGACAGGAAGGTTCTTTGGAAGATTTAGATTTGGGTTTAAGTCTTGGTACCAATTCTTCAAAGGAGCCAATGA
CATCAATTTTCAAGAATCTCAAGCTATAGAATCTTATGATGATAAGAGTGTGCTATCACTTTGTTGACTTGAGTTTATCTGGCAATTTGTCCTCACTCTGATTTCTTGACAGGAGTAGGATGTTGATTACTTTCAGAGTTGTGGGGGAAAAACATGCTGTCTAGAATGCCATTTCCAGTGTCAAAAGAAGATAGAGTAGA
TGATGAAGTGACTAGAGAGCTCCATTCGTTCTTATTTATACCAGTCAAAATTGTTGAAACAGAGCAGAACTTTACATGTGGACCATAATCAACTTGTGTTCCCCGAGTAATTGGCCATAGTTGTTGATAACAAATGCCACCGGGTAGATATAGTCTATGGAATTGGTTAATGAGATTATAAATTATAATTAGTGGCATAT
CTCATGATCCTTTAAATTACATCTTTTTGTACTTGTAATGTTCATATTATCCATCTACAAATTATCCAATTCTATTATTCAAAGGAAGAGAAATCAACTACATGTCATTTTGAGTTGGCAAAGAAGATTGAATCAACAATATTTAAGATGCCATGTGAAATCAGTCATTAAATACAAGTTGGCTGTAGCATTAAATTGTT
GATGGTGTTAAAAATGTTCTTGGGTTGGTGTGATCCTAGCCACAAATGACTAATCTTTTGTTTTGGTTCATTTGGCTTCATTTGGGAAACAACGAATAATAATTACAATGGGTCAACATGAGATAGCCATATGTAAGTAACCGTGGAGAGCACATTGGATCTTTTGGTAAAAAGTAGGCACATTTGGTCAACATGAGATA
GCCATATGCAAGTAACCGTGGAGAGCACATTGGGCCTTAGTGAAAAACAGGCACATTTCTGGTTCTCCTTAAATTAGAATATGCATTTGGATTTATTAAAAGATTCTGGTTAGCGAG
>TRINITY_DN42385_c0_g1_i2 from sample A7 / Example unspliced isoform:CGGAAATTTACGAAAAAGTTCCATGGCTTCCAGCTATCGAAGGCATTAGGAAATTAAATGAAATACAGCATCTGAAGGAGACAGAAATTAAGCAAACTCAATACAAATCTAGCAAGTGTTCAAACTTCGGTGGGCTCTAGACGATTATGAGAAGAAGTTGGAAGTCGATGCAAAAAACGACTCACACAGACGGACCGACT
CTTCACTAGCAGTTCCTCGCGCCCGCGACTGTGTAAATAAAGCTTAAAGCAATTTGCCAGGGCTTCGAAAGACACAGCATGCCCACCATCTTTGCAAAATATCTTCCAGCTGGGTCTTACAAATTACCCTATTTTACTGCCCCTGCCCGGgtttgagccactttagggttctaatgcaattacgaacattgttctgttct
tgtcaataatgcgttgtgccgtttaatattttaaagattcataacaaatgaatactactaactctgtgttcatttacatatttcagTCAATTGAAGTTGTGTTGAAGGAGGAGGAGAGGAGGATAAGCGCAATGGCTACCATGAACGATCCGCCAGTTATTATTGATCGCACCACTCGCGCCACCCGTGGAAAAAGGATG
TCAAAGCTGCTAGATGACGAGCTAGAAAATGATGAACAATTCTGGGGTCAGGATGCCTTCAGAGAGGAAGAAAATGATATTGAATATCAAGAGGAAGGGGACGTGGCTGATGAGTTTGACAGTGACTTTGATGATGAAGATGAACCTGAACCAGATGAAGAGGTAGCAGATGATGAGGACAGAAGGCCTGTGAAGAAGAG
AAAGTTGATTCAAGGAAAGATACTTTTCAAGAAAAAAATCAAAAGGAAGGGGTTTGCCTCTTTAAAGACTGTTCCTGAAACTGTAGAAGGTTCTACCCCTGAATCAAAACCATCCCAGTCCAAACATCAGGAGACTGCCGGTGATCCAGAAGGTGAAAGGACAGTAAGAAAGTCTACAAGAACAGCAGTTATTGTGCGCC
AAGCAGAGCGAGATGCTCTTCGTGCAGCCTTACAATCTTCAATAAAGCCTGTAAAAAGGAAAAGAGAAGGAGAGGAACGGCGGATGACTCAAGAGGAAATGCTTTTAGAAGCTGCACAGACAGAGATCATGAACCTACGACATTTGGAAAAAATGCTGGCACGCGAGGAGGAAGTTAAGAAAAAGGCCATTGTCCATAAA
TCTGTGTACGCAGGCCCACTTATATGTTTTTACTCTAGAGATGGAAAGAATACTCTGGAGTTTACTAAGGTAGCGGCATTTCCATCAGATTTGTTTTCAAAATCTGTTCCCTATCCAGAGCAACCTCTATGTGTTGTAACGGGGCAACCTGCCAAGTATTGTGACCCAAATACAGGATTGCCATATGCAACAAAGGAGGC
TTTCAAAATCATTCGAGAAAGGTTTTCAGAAGCAAACAAACGCAGAGACCGCATCCATATGCAAGACATGGGCCCACTGTTTACTGCAATATCAGGACAAGGATTTGCCAAGAAAGGGAAAAGGTCAAATTCTGGGAGGGCGAAGTCATCCTCATGTCAACAGAAGGTGGATGATCTGCAGTTAGAGTCAGGGGAACGAC
TCTTGCCTTCATGTGTGGATAGAAACGAGTCAAGCATTGCTGCTTCTGATGTTAAAAATGATTTACAGGTGAATGTTATATCACACTTGTCTAGATTGCCTACATCGTCAACATTGCCGCAACCAAATTGTGCTGAGTCATCCCTGGGTGATGATCTTTCTTCAGATGCCAAAATGTTTACTAAAGAAAGATCTATAGCA
ACACCACAGGCTGGAGGATCAAACCCATCATCTAGTGTTGTACCAGTGCCAGGGCCAGAGACAAGACAGGAAGGTTCTTTGGAAGATTTAGATTTGGGTTTAAGTCTTGGTACCAATTCTTCAAAGGAGCCAATGACATCAATTTTCAAGAATCTCAAGCTATAGAATCTTATGATGATAAGAGTGTGCTATCACTTTGT
TGACTTGAGTTTATCTGGCAATTTGTCCTCACTCTGATTTCTTGACAGGAGTAGGATGTTGATTACTTTCAGAGTTGTGGGGGAAAAACATGCTGTCTAGAATGCCATTTCCAGTGTCAAAAGAAGATAGAGTAGATGATGAAGTGACTAGAGAGCTCCATTCGTTCTTATTTATACCAGTCAAAATTGTTGAAACAGAG
CAGAACTTTACATGTGGACCATAATCAACTTGTGTTCCCCGAGTAATTGGCCATAGTTGTTGATAACAAATGCCACCGGGTAGATATAGTCTATGGAATTGGTTAATGAGATTATAAATTATAATTAGTGGCATATCTCATGATCCTTTAAATTACATCTTTTTGTACTTGTAATGTTCATATTATCCATCTACAAATTA
TCCAATTCTATTATTCAAAGGAAGAGAAATCAACTACATGTCATTTTGAGTTGGCAAAGAAGATTGAATCAACAATATTTAAGATGCCATGTGAAATCAGTCATTAAATACAAGTTGGCTGTAGCATTAAATTGTTGATGGTGTTAAAAATGTTCTTGGGTTGGTGTGATCCTAGCCACAAATGACTAATCTTTTGTTTT
GGTTCATTTGGCTTCATTTGGGAAACAACGAATAATAATTACAATGGGTCAACATGAGATAGCCATATGTAAGTAACCGTGGAGAGCACATTGGATCTTTTGGTAAAAAGTAGGCACATTTGGTCAACATGAGATAGCCATATGCAAGTAACCGTGGAGAGCACATTGGGCCTTAGTGAAAAACAGGCACATTTCTGGTT
CTCCTTAAATTAGAATATGCATTTGGATTTATTAAAAGATTCTGGTTAGCGAG
Intron 2 GTATATTTAA ... GGGCTTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 48 | 13 | 12 | 5 |
| A2 | 34.38 | 21 | 11 | 1 |
| A3 | 39.62 | 32 | 21 | 0 |
| A4 | 24 | 19 | 6 | 4 |
| A5 | 31.25 | 11 | 5 | 0 |
| A6 | 0 | 3 | 0 | 2 |
| A7 | 41.38 | 17 | 12 | 0 |
| A8 | 29.73 | 26 | 11 | 2 |
| A9 | 37.25 | 32 | 19 | 2 |
| A10 | 36.17 | 30 | 17 | 0 |
>TRINITY_DN122326_c11_g2_i11 from sample A1 / Example spliced isoformTACAAATCTAGCAAGTGTTCAAACTTCGGTGGGCTCTAGACGATTATGAGAAGAAGTTGGAAGTCGATGCAAAAAACGACTCACACAGACGGACCGACTCTTCACTAGCAGTTCCTCGCGCCCGCGACTGTGTAAATAAAGCTTAAAGCAATTTGCCAGGGCTTCGAAAGACACAGCATGCCCACCATCTTTGCAAAATA
TCTTCCAGCTGGGTCTTACAAATTACCCTATTTTACTGCCCCTGCCCGGGTTTGAGCCACTTTAGGGTTCTAATGCAATTACGAACATTGTTCTGTTCTTGTCAATAATGCGTTGTGCCGTTTAATATTTTAAAGATTCATAACAAATGAATACTACTAACTCTGTGTTCATTTACATATTTCAGTCAATTGAAGTTGTG
TTGAAGGAGGAGGAGAGGAGGATAAGCGCAATGGCTACCATGAACGATCCGCCAGTTATTATTGATCGCACCACTCGCGCCACCCGTGGAAAAAGGATGTCAAAGCTGCTAGATGACGAGCTAGAAAATGATGAACAATTCTGGGGTCAGGATGCCTTCAGAGAGGAAGAAAATGATATTGAATATCAAGAGGAAGGGGA
CGTGGCTGATGAGTTTGACAGTGACTTTGATGATGAAGATGAACCTGAACCAGATGAAGAGGTAGCAGATGATGAGGACAGAAGGCCTGTGAAGAAGAGAAAGTTGATTCAAGGAAAGATACTTTTCAAGAAAAAAATCAAAAGGAAGGGGTTTGCCTCTTTAAAGACTGTTCCTGAAACTGTAGAAGGTTCTACCCCTG
AATCAAAACCATCCCAGTCCAAACATCAGGAGACTGCCGGTGATCCAGAAGGTGAAAGGACAGTAAGAAAGTCTACAAGAACAGCAGTTATTGTGCGCCAAGCAGAGCGAGATGCTCTTCGTGCAGCCTTACAATCTTCAATAAAGCCTGTAAAAAGGAAAAGAGAAGGAGAGGAACGGCGGATGACTCAAGAGGAAATG
CTTTTAGAAGCTGCACAGACAGAGATCATGAACCTACGACATTTGGAAAAAATGCTGGCACGCGAGGAGGAAGTTAAGAAAAAGGCCATTGTCCATAAATCTGTGTACGCAGGCCCACTTATATGTTTTTACTCTAGAGATGGAAAGAATACTCTGGAGTTTACTAAGGTAGCGGCATTTCCATCAGATTTGTTTTCAAA
ATCTGTTCCCTATCCAGAGCAACCTCTATGTGTTGTAACGGGGCAACCTGCCAAGTATTGTGACCCAAATACAGGATTGCCATATGCAACAAAGGAGGCTTTCAAAATCATTCGAGAAAGGTTTTCAGAAGCAAACAAACGCAGAGACCGCATCCATATGCAAGACATGGGCCCACTGTTTACTGCAATATCAGGACAAG
GATTTGCCAAGAAAGGGAAAAGGTCAAATTCTGGGAGGGCGAAGTCATCCTCATGTCAACAGAAGGTGGATGATCTGCAGTTAGAGTCAGGGGAACGACTCTTGCCTTCATGTGTGGATAGAAACGAGTCAAGCATTGCTGCTTCTGATGTTAAAAATGATTTACAGGTGAATGTTATATCACACTTGTCTAGATTGCCT
ACATCGTCAACATTGCCGCAACCAAATTGTGCTGAGTCATCCCTGGGTGATGATCTTTCTTCAGATGCCAAAATGTTTACTAAAGAAAGATCTATAGCAACACCACAGGCTGGAGGATCAAACCCATCATCTAGTGTTGTACCAGTGCCAGGGCCAGAGACAAGACAGGAAGGTTCTTTGGAAGATTTAGATTTGGGTTT
AAGTCTTGGTACCAATTCTTCAAAGGAGCCAATGACATCAATTTTCAAGAATCTCAAGCTATAGAATCTTATGATGATAAGAGTGTGCTATCACTTTGTTGACTTGAGTTTATCTGGCAATTTGTCCTCACTCTGATTTCTTGACAGGAGTAGGATGTTGATTACTTTCAGAGTTGTGGGGGAAAAACATGCTGTCTAGA
ATGCCATTTCCAGTGTCAAAAGAAGATAGAGTAGATGATGAAGTGATTAGAGAGCTCCATTCGTTCTTATTTATACCAGTCAAAATTGTTGAAACAGAGCAGAACTTTACATGTGGACCATAATCAACTTGTGTTCCCCGAGTAATTGGCCATAGTTGTTGATAACAAATGCCACCGGGTAGATATAGTCTATGGAATTG
GTTAATGAGATTATAAATTATAATTAGTGGCATATCTCATGATCCTTTAAATTACATCTTTTTGTACTTGTAATGTTCATATTATCCATCTACAAATTATCCAATTCTATTATTCAAAGGAAGAGAAATCAACTACATGTCATTTTGAGTTGGCAAAGAAGATTGAATCAACAATATTTAAGATGCCATGTGAAATCAGT
CATTAAATACAAGTTGGCTGTAGCATTAAATTGTTGATGGTGTTAAAAATGTTCTTGGGTTGGTGTGATCCTAGCCACAAATGACTAATCTTTTGTTTTGGTTCATTTGGCTTCATTTGGGAAACAACGAATAATAATTACAATGGGTCAACATGAGATAGCCATA
>TRINITY_DN122326_c11_g2_i5 from sample A1 / Example unspliced isoform:TACAAATCTAGCAAGTGTTCAAACTTCGGTGGGCTCTAGACGATTATGAGAAGAAGTTGGAAGTCGATGCAAAAAACGACTCACACAGACGGACCGACTCTTCACTAGCAGTTCCTCGCGCCCGCGACTGTGTAAATAAAGCTTAAAGCAATTTGCCAGgtatatttaactgcataattttgttagaatttctctacatt
tctctgagaaaataatgccctgcggagtggctataaatagcgagaacttctgggctttcagGGCTTCGAAAGACACAGCATGCCCACCATCTTTGCAAAATATCTTCCAGCTGGGTCTTACAAATTACCCTATTTTACTGCCCCTGCCCGGGTTTGAGCCACTTTAGGGTTCTAATGCAATTACGAACATTGTTCTGTTC
TTGTCAATAATGCGTTGTGCCGTTTAATATTTTAAAGATTCATAACAAATGAATACTACTAACTCTGTGTTCATTTACATATTTCAGTCAATTGAAGTTGTGTTGAAGGAGGAGGAGAGGAGGATAAGCGCAATGGCTACCATGAACGATCCGCCAGTTATTATTGATCGCACCACTCGCGCCACCCGTGGAAAAAGGAT
GTCAAAGCTGCTAGATGACGAGCTAGAAAATGATGAACAATTCTGGGGTCAGGATGCCTTCAGAGAGGAAGAAAATGATATTGAATATCAAGAGGAAGGGGACGTGGCTGATGAGTTTGACAGTGACTTTGATGATGAAGATGAACCTGAACCAGATGAAGAGGTAGCAGATGATGAGGACAGAAGGCCTGTGAAGAAGA
GAAAGTTGATTCAAGGAAAGATACTTTTCAAGAAAAAAATCAAAAGGAAGGGGTTTGCCTCTTTAAAGACTGTTCCTGAAACTGTAGAAGGTTCTACCCCTGAATCAAAACCATCCCAGTCCAAACATCAGGAGACTGCCGGTGATCCAGAAGGTGAAAGGACAGTAAGAAAGTCTACAAGAACAGCAGTTATTGTGCGC
CAAGCAGAGCGAGATGCTCTTCGTGCAGCCTTACAATCTTCAATAAAGCCTGTAAAAAGGAAAAGAGAAGGAGAGGAACGGCGGATGACTCAAGAGGAAATGCTTTTAGAAGCTGCACAGACAGAGATCATGAACCTACGACATTTGGAAAAAATGCTGGCACGCGAGGAGGAAGTTAAGAAAAAGGCCATTGTCCATAA
ATCTGTGTACGCAGGCCCACTTATATGTTTTTACTCTAGAGATGGAAAGAATACTCTGGAGTTTACTAAGGTAGCGGCATTTCCATCAGATTTGTTTTCAAAATCTGTTCCCTATCCAGAGCAACCTCTATGTGTTGTAACGGGGCAACCTGCCAAGTATTGTGACCCAAATACAGGATTGCCATATGCAACAAAGGAGG
CTTTCAAAATCATTCGAGAAAGGTTTTCAGAAGCAAACAAACGCAGAGACCGCATCCATATGCAAGACATGGGCCCACTGTTTACTGCAATATCAGGACAAGGATTTGCCAAGAAAGGGAAAAGGTCAAATTCTGGGAGGGCGAAGTCATCCTCATGTCAACAGAAGGTGGATGATCTGCAGTTAGAGTCAGGGGAACGA
CTCTTGCCTTCATGTGTGGATAGAAACGAGTCAAGCATTGCTGCTTCTGATGTTAAAAATGATTTACAGGTGAATGTTATATCACACTTGTCTAGATTGCCTACATCGTCAACATTGCCGCAACCAAATTGTGCTGAGTCATCCCTGGGTGATGATCTTTCTTCAGATGCCAAAATGTTTACTAAAGAAAGATCTATAGC
AACACCACAGGCTGGAGGATCAAACCCATCATCTAGTGTTGTACCAGTGCCAGGGCCAGAGACAAGACAGGAAGGTTCTTTGGAAGATTTAGATTTGGGTTTAAGTCTTGGTACCAATTCTTCAAAGGAGCCAATGACATCAATTTTCAAGAATCTCAAGCTATAGAATCTTATGATGATAAGAGTGTGCTATCACTTTG
TTGACTTGAGTTTATCTGGCAATTTGTCCTCACTCTGATTTCTTGACAGGAGTAGGATGTTGATTACTTTCAGAGTTGTGGGGGAAAAACATGCTGTCTAGAATGCCATTTCCAGTGTCAAAAGAAGATAGAGTAGATGATGAAGTGATTAGAGAGCTCCATTCGTTCTTATTTATACCAGTCAAAATTGTTGAAACAGA
GCAGAACTTTACATGTGGACCATAATCAACTTGTGTTCCCCGAGTAATTGGCCATAGTTGTTGATAACAAATGCCACCGGGTAGATATAGTCTATGGAATTGGTTAATGAGATTATAAATTATAATTAGTGGCATATCTCATGATCCTTTAAATTACATCTTTTTGTACTTGTAATGTTCATATTATCCATCTACAAATT
ATCCAATTCTATTATTCAAAGGAAGAGAAATCAACTACATGTCATTTTGAGTTGGCAAAGAAGATTGAATCAACAATATTTAAGATGCCATGTGAAATCAGTCATTAAATACAAGTTGGCTGTAGCATTAAATTGTTGATGGTGTTAAAAATGTTCTTGGGTTGGTGTGATCCTAGCCACAAATGACTAATCTTTTGTTT
TGGTTCATTTGGCTTCATTTGGGAAACAACGAATAATAATTACAATGGGTCAACATGAGATAGCCATA
Intron 3 GTATATTTAA ... CATATTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 20 | 48 | 12 | 12 |
| A2 | 24.27 | 39 | 11 | 14 |
| A3 | 14.81 | 92 | 21 | 11 |
| A4 | 13.04 | 30 | 6 | 3 |
| A5 | 21.21 | 13 | 5 | 2 |
| A6 | 20 | 8 | 0 | 4 |
| A7 | 18.44 | 73 | 12 | 21 |
| A8 | 21.82 | 43 | 11 | 13 |
| A9 | 19.32 | 71 | 19 | 15 |
| A10 | 11.9 | 74 | 17 | 3 |
>TRINITY_DN122326_c11_g2_i7 from sample A1 / Example spliced isoformTACAAATCTAGCAAGTGTTCAAACTTCGGTGGGCTCTAGACGATTATGAGAAGAAGTTGGAAGTCGATGCAAAAAACGACTCACACAGACGGACCGACTCTTCACTAGCAGTTCCTCGCGCCCGCGACTGTGTAAATAAAGCTTAAAGCAATTTGCCAGTCAATTGAAGTTGTGTTGAAGGAGGAGGAGAGGAGGATAAG
CGCAATGGCTACCATGAACGATCCGCCAGTTATTATTGATCGCACCACTCGCGCCACCCGTGGAAAAAGGATGTCAAAGCTGCTAGATGACGAGCTAGAAAATGATGAACAATTCTGGGGTCAGGATGCCTTCAGAGAGGAAGAAAATGATATTGAATATCAAGAGGAAGGGGACGTGGCTGATGAGTTTGACAGTGACT
TTGATGATGAAGATGAACCTGAACCAGATGAAGAGGTAGCAGATGATGAGGACAGAAGGCCTGTGAAGAAGAGAAAGTTGATTCAAGGAAAGATACTTTTCAAGAAAAAAATCAAAAGGAAGGGGTTTGCCTCTTTAAAGACTGTTCCTGAAACTGTAGAAGGTTCTACCCCTGAATCAAAACCATCCCAGTCCAAACAT
CAGGAGACTGCCGGTGATCCAGAAGGTGAAAGGACAGTAAGAAAGTCTACAAGAACAGCAGTTATTGTGCGCCAAGCAGAGCGAGATGCTCTTCGTGCAGCCTTACAATCTTCAATAAAGCCTGTAAAAAGGAAAAGAGAAGGAGAGGAACGGCGGATGACTCAAGAGGAAATGCTTTTAGAAGCTGCACAGACAGAGAT
CATGAACCTACGACATTTGGAAAAAATGCTGGCACGCGAGGAGGAAGTTAAGAAAAAGGCCATTGTCCATAAATCTGTGTACGCAGGCCCACTTATATGTTTTTACTCTAGAGATGGTTAGTATATTTGCTTGCCCAGGTTCATATTCGTAATTTAATGTATCCTGATTACCATCTGGCTCCTCTCTCTAATCCATGGTC
TGAACTTTTAGGATGCCATAGAATTCAGTGTTCTGTTACTTTGTTATGTACTATTTTGGTAATTTCTGTTCATCTTCTTTACTCGTCAGCATAGAGAATGATATATAACTTTCCAAACATATAATTATGTAAACAATTATACTAATT
>TRINITY_DN122326_c11_g2_i5 from sample A1 / Example unspliced isoform:TACAAATCTAGCAAGTGTTCAAACTTCGGTGGGCTCTAGACGATTATGAGAAGAAGTTGGAAGTCGATGCAAAAAACGACTCACACAGACGGACCGACTCTTCACTAGCAGTTCCTCGCGCCCGCGACTGTGTAAATAAAGCTTAAAGCAATTTGCCAGgtatatttaactgcataattttgttagaatttctctacatt
tctctgagaaaataatgccctgcggagtggctataaatagcgagaacttctgggctttcagggcttcgaaagacacagcatgcccaccatctttgcaaaatatcttccagctgggtcttacaaattaccctattttactgcccctgcccgggtttgagccactttagggttctaatgcaattacgaacattgttctgttc
ttgtcaataatgcgttgtgccgtttaatattttaaagattcataacaaatgaatactactaactctgtgttcatttacatatttcagTCAATTGAAGTTGTGTTGAAGGAGGAGGAGAGGAGGATAAGCGCAATGGCTACCATGAACGATCCGCCAGTTATTATTGATCGCACCACTCGCGCCACCCGTGGAAAAAGGAT
GTCAAAGCTGCTAGATGACGAGCTAGAAAATGATGAACAATTCTGGGGTCAGGATGCCTTCAGAGAGGAAGAAAATGATATTGAATATCAAGAGGAAGGGGACGTGGCTGATGAGTTTGACAGTGACTTTGATGATGAAGATGAACCTGAACCAGATGAAGAGGTAGCAGATGATGAGGACAGAAGGCCTGTGAAGAAGA
GAAAGTTGATTCAAGGAAAGATACTTTTCAAGAAAAAAATCAAAAGGAAGGGGTTTGCCTCTTTAAAGACTGTTCCTGAAACTGTAGAAGGTTCTACCCCTGAATCAAAACCATCCCAGTCCAAACATCAGGAGACTGCCGGTGATCCAGAAGGTGAAAGGACAGTAAGAAAGTCTACAAGAACAGCAGTTATTGTGCGC
CAAGCAGAGCGAGATGCTCTTCGTGCAGCCTTACAATCTTCAATAAAGCCTGTAAAAAGGAAAAGAGAAGGAGAGGAACGGCGGATGACTCAAGAGGAAATGCTTTTAGAAGCTGCACAGACAGAGATCATGAACCTACGACATTTGGAAAAAATGCTGGCACGCGAGGAGGAAGTTAAGAAAAAGGCCATTGTCCATAA
ATCTGTGTACGCAGGCCCACTTATATGTTTTTACTCTAGAGATGGAAAGAATACTCTGGAGTTTACTAAGGTAGCGGCATTTCCATCAGATTTGTTTTCAAAATCTGTTCCCTATCCAGAGCAACCTCTATGTGTTGTAACGGGGCAACCTGCCAAGTATTGTGACCCAAATACAGGATTGCCATATGCAACAAAGGAGG
CTTTCAAAATCATTCGAGAAAGGTTTTCAGAAGCAAACAAACGCAGAGACCGCATCCATATGCAAGACATGGGCCCACTGTTTACTGCAATATCAGGACAAGGATTTGCCAAGAAAGGGAAAAGGTCAAATTCTGGGAGGGCGAAGTCATCCTCATGTCAACAGAAGGTGGATGATCTGCAGTTAGAGTCAGGGGAACGA
CTCTTGCCTTCATGTGTGGATAGAAACGAGTCAAGCATTGCTGCTTCTGATGTTAAAAATGATTTACAGGTGAATGTTATATCACACTTGTCTAGATTGCCTACATCGTCAACATTGCCGCAACCAAATTGTGCTGAGTCATCCCTGGGTGATGATCTTTCTTCAGATGCCAAAATGTTTACTAAAGAAAGATCTATAGC
AACACCACAGGCTGGAGGATCAAACCCATCATCTAGTGTTGTACCAGTGCCAGGGCCAGAGACAAGACAGGAAGGTTCTTTGGAAGATTTAGATTTGGGTTTAAGTCTTGGTACCAATTCTTCAAAGGAGCCAATGACATCAATTTTCAAGAATCTCAAGCTATAGAATCTTATGATGATAAGAGTGTGCTATCACTTTG
TTGACTTGAGTTTATCTGGCAATTTGTCCTCACTCTGATTTCTTGACAGGAGTAGGATGTTGATTACTTTCAGAGTTGTGGGGGAAAAACATGCTGTCTAGAATGCCATTTCCAGTGTCAAAAGAAGATAGAGTAGATGATGAAGTGATTAGAGAGCTCCATTCGTTCTTATTTATACCAGTCAAAATTGTTGAAACAGA
GCAGAACTTTACATGTGGACCATAATCAACTTGTGTTCCCCGAGTAATTGGCCATAGTTGTTGATAACAAATGCCACCGGGTAGATATAGTCTATGGAATTGGTTAATGAGATTATAAATTATAATTAGTGGCATATCTCATGATCCTTTAAATTACATCTTTTTGTACTTGTAATGTTCATATTATCCATCTACAAATT
ATCCAATTCTATTATTCAAAGGAAGAGAAATCAACTACATGTCATTTTGAGTTGGCAAAGAAGATTGAATCAACAATATTTAAGATGCCATGTGAAATCAGTCATTAAATACAAGTTGGCTGTAGCATTAAATTGTTGATGGTGTTAAAAATGTTCTTGGGTTGGTGTGATCCTAGCCACAAATGACTAATCTTTTGTTT
TGGTTCATTTGGCTTCATTTGGGAAACAACGAATAATAATTACAATGGGTCAACATGAGATAGCCATA
Intron 4 GTTCTAATGC ... CATATTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 66.67 | 6 | 4 | 12 |
| A2 | 63.64 | 8 | 6.5 | 14 |
| A3 | 45.83 | 13 | 0 | 11 |
| A4 | 50 | 3 | 0.5 | 3 |
| A5 | 33.33 | 4 | 0 | 2 |
| A6 | 57.14 | 3 | 3.5 | 4 |
| A7 | 58.33 | 15 | 3.5 | 21 |
| A8 | 52 | 12 | 0.5 | 13 |
| A9 | 45.45 | 18 | 0.5 | 15 |
| A10 | 30 | 7 | 0 | 3 |
>TRINITY_DN110957_c0_g3_i8 from sample A2 / Example spliced isoformCAAATCTAGCAAGTGTTCAAACTTCGGTGGGCTCTAGACGATTATGAGAAGAAGTTGGAAGTCGATGCAAAAAACGACTCACACAGACGGACCGACTCTTCACTAGCAGTTCCTCGCGCCCGCGACTGTGTAAATAAAGCTTAAAGCAATTTGCCAGGGCTTCGAAAGACACAGCATGCCCACCATCTTTGCAAAATATC
TTCCAGCTGGGTCTTACAAATTACCCTATTTTACTGCCCCTGCCCGGGTTTGAGCCACTTTAGGTCAATTGAAGTTGTGTTGAAGGAGGAGGAGAGGAGGATAAGCGCAATGGCTACCATGAACGATCCGCCAGTTATTATTGATCGCACCACTCGCGCCACCCGTGGAAAAAGGATGTCAAAGCTGCTAGATGACGAGC
TAGAAAATGATGAACAATTCTGGGGTCAGGATGCCTTCAGAGAGGAAGAAAATGATATTGAATATCAAGAGGAAGGGGACGTGGCTGATGAGTTTGACAGTGACTTTGATGATGAAGATGAACCTGAACCAGATGAAGAGGTAGCAGATGATGAGGACAGAAGGCCTGTGAAGAAGAGAAAGTTGATTCAAGGAAAGATA
CTTTTCAAGAAAAAAATCAAAAGGAAGGGGTTTGCCTCTTTAAAGACTGTTCCTGAAACTGTAGAAGGTTCTACCCCTGAATCAAAACCATCCCAGTCCAAACATCAGGAGACTGCCGGTGATCCAGAAGGTGAAAGGACAGTAAGAAAGTCTACAAGAACAGCAGTTATTGTGCGCCAAGCAGAGCGAGATGCTCTTCG
TGCAGCCTTACAATCTTCAATAAAGCCTGTAAAAAGGAAAAGAGAAGGAGAGGAACGGCGGATGACTCAAGAGGAAATGCTTTTAGAAGCTGCACAGACAGAGATCATGAACCTACGACATTTGGAAAAAATGCTGGCACGCGAGGAGGAAGTTAAGAAAAAGGCCATTGTCCATAAATCTGTGTACGCAGGCCCACTTA
TATGTTTTTACTCTAGAGATGGAAAGAATACTCTGGAGTTTACTAAGGTAGCGGCATTTCCATCAGATTTGTTTTCAAAATCTGTTCCCTATCCAGAGCAACCTCTATGTGTTGTAACGGGGCAACCTGCCAAGTATTGTGACCCAAATACAGGATTGCCATATGCAACAAAGGAGGCTTTCAAAATCATTCGAGAAAGG
TTTTCAGAAGCAAACAAACGCAGAGACCGCATCCATATGCAAGACATGGGCCCACTGTTTACTGCAATATCAGGACAAGGATTTGCCAAGAAAGGGAAAAGGTCAAATTCTGGGAGGGCGAAGTCATCCTCATGTCAACAGAAGGTGGATGATCTGCAGTTAGAGTCAGGGGAACGACTCTTGCCTTCATGTGTGGATAG
AAACGAGTCAAGCATTGCTGCTTCTGATGTTAAAAATGATTTACAGGTGAATGTTATATCACACTTGTCTAGATTGCCTACATCGTCAACATTGCCGCAACCAAATTGTGCTGAGTCATCCCTGGGTGATGATCTTTCTTCAGATGCCAAAATGTTTACTAAAGAAAGATCTATAGCAACACCACAGGCTGGAGGATCAA
ACCCATCATCTAGTGTTGTACCAGTGCCAGGGCCAGAGACAAGACAGGAAGGTTCTTTGGAAGATTTAGATTTGGGTTTAAGTCTTGGTACCAATTCTTCAAAGGAGCCAATGACATCAATTTTCAAGAATCTCAAGCTATAGAATCTTATGATGATAAGAGTGTGCTATCACTTTGTTGACTTGAGTTTATCTGGCAAT
TTGTCCTCACTCTGATTTCTTGACAGGAGTAGGATGTTGAGAACTTTCAGAGTTGTGGGGGAAAAACATGCTGTCTAGAATGCCATTTCCAGTGTCAAAAGAAGATAGAGTAGATGATGAAGTGACTAGAGAGCTCCATTCGTTCTTATTTATACCAGTCAAAATTGTTGAAACAGAGCAGAACTTTACATGTGGACCAT
AATCAACTTGTGTTCCCCGAGTAATTGGCCATAGTTGTTGATAACAAATGCCACCGGGTAGATATAGTCTATGGAATTGGTTAATGAGATTATAAATTATAATTAGTGGCATATCTCATGATCCTTTAAATTACATCTTTTTGTACTTGTAATGTTCATATTATCCATCTACAAATTATCCAATTCTATTATTCAAAGGA
AGAGAAATCAACTACATGTCATTTTGAGTTGGCAAAGAAGATTGAATCAACAATATTTAAGATGCCATGTGAAATCAGTCATTAAATACAAGTTGGCTGTAGCATTAAATTGTTGATGGTGTTAAAAATGTTCTTGGGTTGGTGTGATCCTAGC
>TRINITY_DN110957_c0_g3_i3 from sample A2 / Example unspliced isoform:GTTTGAGCCACTTTAGGgttctaatgcaattacgaacattgttctgttcttgtcaataatgcgttgtgccgtttaatattttaaagattcataacaaatgaatactactaactctgtgttcatttacatatttcagTCAATTGAAGTTGTGTTGAAGGAGGAGGAGAGGAGGATAAGCGCAATGGCTACCATGAACGATC
CGCCAGTTATTATTGATCGCACCACTCGCGCCACCCGTGGAAAAAGGATGTCAAAGCTGCTAGATGACGAGCTAGAAAATGATGAACAATTCTGGGGTCAGGATGCCTTCAGAGAGGTAGAAATTTTCATGGTTTGATTAAGCTACATGTCTATTAAGTCAC