NA ----> NA

Intron 1 GTATGCCTTG ... TACATTGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	74.55	7	24	17
A2	78.95	2	5	10
A3	67.57	6	10	15
A4	65.71	6	11	12
A5	53.49	10	10	13
A6	73.91	30	85	85
A7	72.62	36	65	126
A8	75.51	30	71	114
A9	72.73	36	58	134
A10	75	25	68	82

>TRINITY_DN36756_c0_g1_i1 from sample A7 / Example spliced isoform

AGAGAAGGGGGCAGGGAGGGCCTCGGAGCGGTAACATGTGGATGATCAATGGTTTCCAAGCATTACCCTGAAGATTTTCCGTGATGGTTTATGGTTTTCAATCTGAATGCTGCTCGGCTAACAAGAACCTCCTTCTCTTTGCGGCCTAGTGATGTGGCTGTGGTTGATTTGGAATGGGTTTCTCCGGTTCCATTGATCGC
TCTGAAGGCCGAATCCTTCTTTCTGATCTTATTTTGGTTCAGGTCGACATCTATCTTCTGTTAGCCGTAATCAATGGCGGATTTGTCTTTTAAATAGGTAATCGTATCGGCATAAATTTCGTGTGTATCCCCATCCTACAGAGAGTAGGGTGATGGTGAATGCTTTTCTATCTCTTCCGGTGGCTCTGTGTTGAAATTCT
GCCGATTGGATTAGGGTTTTGAGAATCTTTATTAATATTCTTGTGAAAAATACTTTCTGTGTTCTCATTTGATATCAAACCTGTATAAATAGTATATTTTCTTTAACTCCCTTATATCTCATTTTCTTTATGCTAATTCATTGTCTAGTTTGATTGGCATACTCAGAAGAAGCATACTAAGAAGAAAATCAATGTTCAGA
TACACGGCAATTTACAATTTTATGAAATTAATACCATCTCTTCTTTCACCCGCTTGCATCTCATTTTCTTATTCCTGTGTATAATTTGATTGACATATTGGCAAGAAAATCCATATTTAGCTTTAGGGCCCTTCACACTTGTGAAGGTAC

>TRINITY_DN36756_c0_g1_i2 from sample A7 / Example unspliced isoform:

AGAGAAGGGGGCAGGGAGGGCCTCGGAGCGGTAACATGTGGATGATCAATGGTTTCCAAGCATTACCCTGAAGATTTTCCGTGATGGTTTATGGTTTTCAATCTGAATGCTGCTCGGCTAACAAGAACCTCCTTCTCTTTGCGGCCTAGTGATGTGGCTGTGGTTGATTTGGAATGGGTTTCTCCGGTTCCATTGATCGC
TCTGAAGGCCGAATCCTTCTTTCTGATCTTATTTTGGTTCAGGTCGACATCTATCTTCTGTTAGCCGTAATCAATGGCGGATTTGTCTTTTAAATAGGTAATCGTATCGGCATAAATTTCGTGTGTATCCCCATCCTACAGgtatgccttgcgtgccctcaccttttgctggttctcgtttaaatcttggcagaaattgg
ggttaaagtagaggggcttaccttttgatggttctcgtttaaatcttcgcagaaattggggttaaagtagaggggtttaatttttttaaagcttattcttaactatcctacattgcagAGAGTAGGGTGATGGTGAATGCTTTTCTATCTCTTCCGGTGGCTCTGTGTTGAAATTCTGCCGATTGGATTAGGGTTTTGAG
AATCTTTATTAATATTCTTGTGAAAAATACTTTCTGTGTTCTCATTTGATATCAAACCTGTATAAATAGTATATTTTCTTTAACTCCCTTATATCTCATTTTCTTTATGCTAATTCATTGTCTAGTTTGATTGGCATACTCAGAAGAAGCATACTAAGAAGAAAATCAATGTTCAGATACACGGCAATTTACAATTTTAT
GAAATTAATACCATCTCTTCTTTCACCCGCTTGCATCTCATTTTCTTATTCCTGTGTATAATTTGATTGACATATTGGCAAGAAAATCCATATTTAGCTTTAGGGCCCTTCACACTTGTGAAGGTAC