sp|Q6ZIX2|SMT1_ORYSJ ----> Cycloartenol-C-24-methyltransferase 1
Intron 1 GTAAACTTTC ... CTACAAAGAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 88.46 | 6 | 46 | 6 |
| A2 | 86.36 | 3 | 19 | 1 |
| A3 | 96.55 | 1 | 28 | 1 |
| A4 | 90.91 | 2 | 20 | 2 |
| A5 | 100 | 0 | 14 | 0 |
| A6 | 82.93 | 7 | 34 | 4 |
| A7 | 73.13 | 18 | 49 | 4 |
| A8 | 82.76 | 10 | 48 | 7 |
| A9 | 69.57 | 14 | 32 | 7 |
| A10 | 71.43 | 10 | 25 | 12 |
>TRINITY_DN40238_c0_g1_i2 from sample A9 / Example spliced isoformCAACGGTAGGAGGAGCGATAGATCTGGCTTCGGGAGTGGGAGGCAACATTCAGAAAAGCCAAATGCGGACTGTTGTCGAAGAGTAAGCTTTTCGATCCCGCATTTGGTAATTTTGCTTATTTCCCCACTATGAGCTTGTTTTGAGACGGGCCAGGTTTTGGTAAACCAGAAAGTTCAAGAAACACAGTAAAAATGAGTGT
GAAAGATTTCAATGCACTGGATATGGTGCATTATGCGTTAGGATATACAGTGGCCATTCCTTTCTGGATTCTCACTAGCTATCTACAAAGATTTCTTGAACTTTTTGGATGGTTTCTTTTTAAAAGTTGATTCGATGAAAGAAAGGCCTACATAATATTTGGAATCCATTGGTGTTTTTGTAGTCTTTCCACATAATTTT
CGGAATCCATTGATGTTTTTGTAATCTTTCCACATAATTTTTGGAATCCACTGATACTTTCTTTGTGACAAGCAATGAAAGGATAACGATCGAACTTTAGCAGTCACAATGTATAAGCGGCTTGGTCTTTGTAGTAGCTGCGCTAGAGTTACTTTGTTTTAATAGCAGTAGGAGCATTTGCTTGCAGGTTGCACGAGTTT
TGATGGGGTCATCGCCCTGGGGTGGAGAATGAAGTTTTTGTATGAAAAATATCACATGTACTATGGTGGTGATGAAGGCGCGAGAAAATCTAACTACACGGATATGGTAAATAAATA
>TRINITY_DN40238_c0_g1_i3 from sample A9 / Example unspliced isoform:CAACGGTAGGAGGAGCGATAGATCTGGCTTCGGGAGTGGGAGGCAACATTCAGAAAAGCCAAATGCGGACTGTTGTCGAAGAGTAAGCTTTTCGATCCCGCATTTGGTAATTTTGCTTATTTCCCCACTATGAGCTTGTTTTGAGACGGGCCAGGTTTTGGTAAACCAGAAAGTTCAAGAAACACAGTAAAAATGAGTGT
GAAAGATTTCAATGCACTGGATATGGTGCATTATGCGTTAGGATATACAGTGGCCATTCCTTTCTGGATTCTCACTAGCTATCTACAAAGATTTCTTGAACTTTTTGGATGGTTTCTTTTTAAAAGTTGATTCGATGAAAGAAAGGCCTACATAATATTTGGAATCCATTGGTGTTTTTGTAGTCTTTCCACATAATTTT
CGGAATCCATTGATGTTTTTGTAATCTTTCCACATAATTTTTGGAATCCACTGATACTTTCTTTGTGACAAGCAATGAAAGGATAACGATCGAACTTTAGCAGTCACAATGTATAAGCGGCTTGGTCTTTGTAGTAGCTGCGCTAGAGTTACTTTGTTTTAATAGCAGTAGGAGCATTTGCTTGCAGGTTGCACGAGTTT
TGATGAGGTCATCGCCCTGGGGTGGAGAATGAAGTTTTTgtaaactttctacaggctctttggaatcaattgatgtttttgtaaactttgttgttttccgtgaaaagcaatggaagaataaagatcgaagtttagcagtcataatgtctaagcgtcttggattttgcagcaccgactagctacagtactctgttttaagg
gttgtggtagcatctgcttgcagattgcacatggttttgatgagggcaccaccgtggagaccaaatatgtaatgttataggatatcttgccacattggcatatccctatgttgggatttcgttcctcattaatcagttcttctcttctcctgacgtgatattgttattaggtttggtggttcagccgttacttttatcat
caacaaagaggtaaagacggtggtaacatgtcaggggtagggttacgccattacttttatcatctacaaagagGTATGAAAAATATCACATGTACTATGGTGGTGATGAAGGCGCGAGAAAATCTAACTACACGGATATGGTAAATAAATA
Intron 2 GTAAGCTTTT ... TTGCTTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 73.58 | 7 | 21 | 18 |
| A2 | 81.48 | 5 | 28 | 16 |
| A3 | 72 | 7 | 32 | 4 |
| A4 | 76.92 | 6 | 24 | 16 |
| A5 | 56 | 11 | 25 | 3 |
| A6 | 73.43 | 19 | 89 | 16 |
| A7 | 80.79 | 17 | 99 | 44 |
| A8 | 86.98 | 11 | 104 | 43 |
| A9 | 81.69 | 13 | 91 | 25 |
| A10 | 84.13 | 10 | 87 | 19 |
>TRINITY_DN46728_c2_g2_i1 from sample A7 / Example spliced isoformATGCTTGATTATATTTCAGGAATGGCAACGGTAGGAGGAGCAATAGATTTGGCTTCGGGAGTGGGAGGCAACATTCAGAAAAGCCAAATGCGGACTGTTGTCGAAGAGTTGCACGAGTTTTGATGAGGTCATCGCCCTGGGGTGGAGAATGAAGTTTTTGTAAACTTTCTACAGGCTCTTTGGAATCCATTGATGTTTTT
GTAAACTTTGTTGTTTTCCGTGAAAAGCAATGGAAGAATAAAGATCGAAGTTTAGCAGTCATAATGTCTAAGCGTCTTGGATTTTGCAGCACCGACTAGCTACAGTACTCTGTTTTAAGGGTTGTGGTAGCATCTGCTTGCAGATTGCACATGGTT
>TRINITY_DN46728_c2_g2_i6 from sample A7 / Example unspliced isoform:ATGCTTGATTATATTTCAGGAATGGCAACGGTAGGAGGAGCAATAGATTTGGCTTCGGGAGTGGGAGGCAACATTCAGAAAAGCCAAATGCGGACTGTTGTCGAAGAgtaagcttttcgatcccgcatttggtaattttgcttatttccccactatgagcttgttttgagacgggccaggttttggtaaaccagaaagtt
caagaaacacagtaaaaatgagtgtgaaagatttcaatgcactggatatggtgcattatgcgttaggatatacagtggccattcctttctggattctcactagctatctacaaagatttcttgaactttttggatggtttctttttaaaagttgattcgatgaaagaaaggcctacataatatttggaatccattggtgt
ttttgtagtctttccacataattttcggaatccattgatgtttttgtaatctttccacataatttttggaatccactgatactttctttgtgacaagcaatgaaaggataacgatcgaactttagcagtcacaatgtataagcggcttggtctttgtagtagctgcgctagagttactttgttttaatagcagtaggagc
atttgcttgcagGTTGCACGAGTTTTGATGAGGTCATCGCCCTGGGGTGGAGAATGAAGTTTTTGTAAACTTTCTACAGGCTCTTTGGAATCCATTGATGTTTTTGTAAACTTTGTTGTTTTCCGTGAAAAGCAATGGAAGAATAAAGATCGAAGTTTAGCAGTCATAATGTCTAAGCGTCTTGGATTTTGCAGCACCGA
CTAGCTACAGTACTCTGTTTTAAGGGTTGTGGTAGCATCTGCTTGCAGATTGCACATGGTTTTGATGAGGGCACCACCGTGGAGACCAAATATGTAATGTTATAGGATATCTTGCCACATTGGCATATCCCTATGTTGGGATTTCGTTCCTCATTAATCAGTTCTTCTCTTCTCCTGACGTGATATTGTTATTAGGTTTG
GTGGTTCAGCCGTTACTTTTATCACCAACAAAGAGGTAAAGACGGTGGTAACATGTCAGGGGTAGGGTTACGCCATTACTTTTATCATCTACAAAGAGGTAAAGACTGTAGTCACATGGCAGGGGTAGGGTTACGCTTGTCTTCCTACACTCTGCTTTATTGCATACATAGTCTAACTGCATACTGCTAAAAGGGTAGTT
ATCTCATCTGGTGAGAACTATTAACGCGAAGAAGTATTTCAACTACTTGTTTCCAAAGATGTTGAGATCTGTTTTAGAAGTTCCTAATCTGACAATCAAAGGCCAACCTAGCCGTGGTTAAGGAGAAGCGTTGAAATTTCCATCCACTCCTTATTTTCAGGGTATGAAAAATATCACATGTACTATGGTGGTGATGAAGG
CGCGAGAAAATCTAACTACACGGATATG