NA ----> NA


Intron 1 GTACCAATAT ... TGCTTTACAG

SampleRetention score (%)Exon junction reads5'ss reads3'ss reads
A160.68263439
A272.0623.74567
A364.95304157
A463.9535.349.761
A565.813.32323
A659.63239.3291354
A759.81208.3206.7339
A861.01158191.7251
A963.78165.3216310
A1063.29142.3188248



>TRINITY_DN101519_c0_g1_i5 from sample A4 / Example spliced isoform
CATTTCTTTGGGTGCCCAAATTGGCAATACCCGATAGGCTGTCATCGGTGTACAAATTTATCTCCATCGGACAGATGGTATGAAATTCATGAATCTTGTTTCCACTCACATTCCTTCTCTGGAATTTCATGGATAAAACCCATTTCCTCAATAAACAATTGATGAGGAATACTTCAAAACACCTTTAGTGGGTAGCTAGT
GGTTGGCGTCCGCTGTTGACTTGGGAAAAAGGAAATGTTATGCAAACCAATTAAGTGTGAAGGAAGAATCCATTACAGGCAGGCATCGATGTATGAATAAATCAAATGAATGAATGATTCAACGTGTTGAATGTGTGGATTCCGTGTGTTCCATTATCTCAGTTTTGATTTGTGGTACTGGTATTCCAACATTTCAGAAG
TCAGTCAATTCTGAGGTGAAAGATCATGTGTCCCTTGCGCATCATTTTGGTGTTTCTTTCGGGCTTGGTGGCTGGATACTTTGCCTGGCAAACGTTCCGGACCAAGGAAGACGAAGCCCAAAACCCACCTCAAATCGATTCAAACACAGAAGATGCAGCCTCCCACAAATTGGGACTCTTCAGAAAGGTATCTATGGAAA
AATCCTATGTATTCTTTTCAGACATCCATATCTTACTAGGACATACCCATCTGATGCCAAAAAAGTCATTCATTTCA


>TRINITY_DN101519_c0_g1_i1 from sample A4 / Example unspliced isoform:
CATTTCTTTGGGTGCCCAAATTGGCAATACCCGATAGGCTGTCATCGGTGTACAAATTTATCTCCATCGGACAGATGGTATGAAATTCATGAATCTTGTTTCCACTCACATTCCTTCTCTGGAATTTCATGGATAAAACCCATTTCCTCAATAAACAATTGATGAGGAATACTTCAAAACACCTTTAGTGGGTAGCTAGT
GGTTGGCGTCCGCTGTTGACTTGGGAAAAAGGAAATGTTATGCAAACCAATTAAGTGTGAAGGAAGAATCCATTACAGGCAGGCATCGATGTATGAATAAATCAAATGAATGAATGATTCAACGTGTTGAATGTGTGGATTCCGTGTGTTCCATTATCTCAgtaccaatatcaatccctccacggattgaccttttctga
cactgttctatatttaaggattcaggaggacatttgatctcatattgctttacagtttttgtttgtggtggtggtaatcgaacatttcattgctttacag
GTTTTGATTTGTGGTACTGGTATTCCAACATTTCAGAAGTCAGTCAATTCTGAGGTGAAAGATCATGTGTCCCTTGCGCATCATTTTGGTGTTTCTTTCG
GGCTTGGTGGCTGGATACTTTGCCTGGCAAACGTTCCGGACCAAGGAAGACGAAGCCCAAAACCCACCTCAAATCGATTCAAACACAGAAGATGCAGCCTCCCACAAATTGGGACTCTTCAGAAAGGTTCTTGCAGTAATTGTTTCAGCATTTTGGACATTTGTGGAGATGGCAAGTGGAAGATACTTGTGGCAGAACTT
GGTCAATCACAGCCACAAAACAAATAACAGTTAAATCCTCAAGGCTGTATTGGAGGAAAATGCATATTTCTTTAACTTGTTGTCTCAATGCTATTTGTCTCAGCATTGTAATGTATGTAATGTTTATTTTTTGAGCACGACAGAGTTTCTGTCTATTGTTTGGTGAGAGGTTCCATCATGTTCTGAAATCTCATGATTGA
ATGCACTTATAATAAAGCTGTCAAACTC




Intron 2 GCAGGCATCG ... TGCTTTACAG

SampleRetention score (%)Exon junction reads5'ss reads3'ss reads
A144493839
A245.23643966.7
A338.0385.64857
A44864.95960.7
A541.2930.62023
A639.79507.7318353.3
A737.99456220.4338.4
A836.91358.4168.9250.6
A939.78402.9223309.1
A1035.48417.6212.1247.1



>TRINITY_DN115936_c0_g1_i4 from sample A1 / Example spliced isoform
CCCCATTTCTTTGGGTGCCCAAATTGGCAATACCCGATAGGCTGTCATCGGTGTACAAATTTATCTCCATCGGACAGATGGTATGAAATTCATGAATCTTGTTTCCACTCACATTCCTTCTCTGGAATTTCATGGATAAAACCCATTTCCTCAATAAACAATTGATGAGGAATACTTCAAAACACCTTTAGTGGGTAGCT
AGTGGTTGGCGTCCGCTGTTGACTTGGGGAAAAGGAAATGTTATGCAAACCAATGAAGTGTGAAGGAAGAATCCATTACAGGTTTTGATTTGTGGTACTGGTATTCCAACATTTCAGAAGTCAGTCAATTCTGAGGTGAAAGATCATGTGTCCCTTGCGCATCATTTTGGTGTTTCTTTCGGGCTTGGTGGCTGGATACT
TTGCCTGGCAAACGTTCCGCACCAAGGAAGACGAAGCCCAAAACCCACCTCAAATCGATTCAAACACAGAAGATGCAGCCTCCCACAAATTGGGACTCTTCAGAAAGGTATGTATGGAAAAATCCTATGTATTCTTTTCAGACATCCATATCTTACTAGGACATACCCATCTGATGCCAAAAAAGTCATTCATTTCAGAC
ATTGATGCCTTAGTAGCACAATCCCATCTAAACCCAAGCCTGATATGCATTCCTCTGGGCT


>TRINITY_DN115936_c0_g1_i2 from sample A1 / Example unspliced isoform:
CCCCATTTCTTTGGGTGCCCAAATTGGCAATACCCGATAGGCTGTCATCGGTGTACAAATTTATCTCCATCTGACAGATGGTATGAAATTCATGAATCTTGTTTCCACTCACATTCCTTCTCTGGAATTTCATGGATAAAACCCATTTCCTCAATAAACAATTGATGAGGAATACTTCAAAACACCTTTAGTGGGTAGCT
AGTGGTTGGCGTCCGCTGTTGACTTGGGGAAAAGGAAATGTTATGCAAACCAATGAAGTGTGAAGGAAGAATCCATTACAGgcaggcatcgatgtatgaataaatcaaatgaatgaatgattcaacgagttgaatgtgtggattccgtgtgttccattatctcagtaccaatatcaatccctccacggattgaccttttc
tgacactgttctatatttaaggattcaggaggacatttgatctcatattgctttacagtttttgtttgtggtggtggtaatcgaacatttcattgctttacag
GTTTTGATTTGTGGTACTGGTATTCCAACATTTCAGAAGTCAGTCAATTCTGAGGTGAAAGATCATGTGTCCCTTGCGCATCATTTTGGTGTTTCTT
TCGGGCTTGGTGGCTGGATACTTTGCCTGGCAAACGTTCCGCACCAAGGAAGACGAAGCCCAAAACCCACCTCAAATCGATTCAAACACAGAAGATGCAGCCTCCCACAAATTGGGACTCTTCAGAAAGGTTCTTGCAGTAATTGTTTCAGCATTTTGGACATTTGTGGAGATGGCAAGTGGAAGATACTTGTGGCAGAA
CTTGGTCAATCACAGCCACAGAACAAATAACAGTTAAATCCTCAAGGCTGTATTGGAGGAAAATGCATATTTCTTTAACTTGTTGTCTCAATGCTATTTGTCTCAGCATTGTAATGTATGTAATGTTTCTTTTTTGAGCACGACAGAGTTTCTGTCTATTGTTTGGTGAGAGGTTCCATCATGTTCTGAAATCTCATGAT
TGAATGCACTTGTAATAAAGCTGTCGAACTCAGACATCATGTTGTTGATGAGAAATATAATAGTATCATG




Intron 3 GTGTGTTCCA ... TGCTTTACAG

SampleRetention score (%)Exon junction reads5'ss reads3'ss reads
A151.3735.53639
A262.01344467
A353.2243.54257
A454.84495861
A559.49162423
A652.97305333354
A749.87284226339
A854.33191203.5251
A953.56240243.5310
A1054.47194.5217.5248



>TRINITY_DN115936_c0_g1_i6 from sample A1 / Example spliced isoform
ATGAAATTCATGAATCTTGTTTCCACTCACATTCCTTCTCTGGAATTTCATGGATAAAACCCATTTCCTCAATAAACAATTGATGAGGAATACTTCAAAACACCTTTAGTGGGTAGCTAGTGGTTGGCGTCCGCTGTTGACTTGGGGAAAAGGAAATGTTATGCAAACCAATGAAGTGTGAAGGAAGAATCCATTACAGG
CAGGCATCGATGTATGAATAAATCAAATGAATGAATGATTCAACGAGTTGAATGTGTGGATTCCGTTTTGATTTGTGGTACTGGTATTCCAACATTTCAGAAGTCAGTCAATTCTGAGGTGAAAGATCATGTGTCCCTTGCGCATCATTTTGGTGTTTCTTTCGGGCTTGGTGGCTGGATACTTTGCCTGGCAAACGTTC
CGCACCAAGGAAGACGAAGCCCAAAACCCACCTCAAATCGATTCAAACACAGAAGATGCAGCCTCCCACAAATTGGGACTCTTCAGAAAGGTTCTTGCAGTAATTGTTTCAGCATTTTGGACATTTGTGGAGATGGCAAGTGGAAGATACTTGTGGCAGAACTTGGTCAATCACAGCCACAGAACAAATAACAGTTAAAT
CCTCAAGGCTGTATTGGAGGAAAATGCATATTTCTTTAACTTGTTGTCTCAATGCTATTTGTCTCAGCATTGTAATGTATGTAATGTTTCTTTTTTGAGCACGACAGAGTTTCTGTCTATTGTTTGGTGAGAGGTTCCATCATGTTCTGAAATCTCATGATTGAATGCACTTGTAATAAAGCTGTCGAACTCAGACATCA
TGTTGTTGATGAGAAATATAATAGTATCATG


>TRINITY_DN115936_c0_g1_i2 from sample A1 / Example unspliced isoform:
CCCCATTTCTTTGGGTGCCCAAATTGGCAATACCCGATAGGCTGTCATCGGTGTACAAATTTATCTCCATCTGACAGATGGTATGAAATTCATGAATCTTGTTTCCACTCACATTCCTTCTCTGGAATTTCATGGATAAAACCCATTTCCTCAATAAACAATTGATGAGGAATACTTCAAAACACCTTTAGTGGGTAGCT
AGTGGTTGGCGTCCGCTGTTGACTTGGGGAAAAGGAAATGTTATGCAAACCAATGAAGTGTGAAGGAAGAATCCATTACAGGCAGGCATCGATGTATGAATAAATCAAATGAATGAATGATTCAACGAGTTGAATGTGTGGATTCCgtgtgttccattatctcagtaccaatatcaatccctccacggattgaccttttc
tgacactgttctatatttaaggattcaggaggacatttgatctcatattgctttacagtttttgtttgtggtggtggtaatcgaacatttcattgctttacag
GTTTTGATTTGTGGTACTGGTATTCCAACATTTCAGAAGTCAGTCAATTCTGAGGTGAAAGATCATGTGTCCCTTGCGCATCATTTTGGTGTTTCTT
TCGGGCTTGGTGGCTGGATACTTTGCCTGGCAAACGTTCCGCACCAAGGAAGACGAAGCCCAAAACCCACCTCAAATCGATTCAAACACAGAAGATGCAGCCTCCCACAAATTGGGACTCTTCAGAAAGGTTCTTGCAGTAATTGTTTCAGCATTTTGGACATTTGTGGAGATGGCAAGTGGAAGATACTTGTGGCAGAA
CTTGGTCAATCACAGCCACAGAACAAATAACAGTTAAATCCTCAAGGCTGTATTGGAGGAAAATGCATATTTCTTTAACTTGTTGTCTCAATGCTATTTGTCTCAGCATTGTAATGTATGTAATGTTTCTTTTTTGAGCACGACAGAGTTTCTGTCTATTGTTTGGTGAGAGGTTCCATCATGTTCTGAAATCTCATGAT
TGAATGCACTTGTAATAAAGCTGTCGAACTCAGACATCATGTTGTTGATGAGAAATATAATAGTATCATG




Intron 4 GTATGAAATT ... TCCATTACAG

SampleRetention score (%)Exon junction reads5'ss reads3'ss reads
A164.47272049
A271.91253064
A372.27331786
A462.5392065
A569.77131430
A671.8819882506
A768.5720971456
A870.6714941359
A972.12155113401
A1075.3613687416



>TRINITY_DN115936_c0_g1_i5 from sample A1 / Example spliced isoform
CCCCATTTCTTTGGGTGCCCAAATTGGCAATACCCGATAGGCTGTCATCGGTGTACAAATTTATCTCCATCGGACAGATGGTTTTGATTTGTGGTACTGGTATTCCAACATTTCAGAAGTCAGTCAATTCTGAGGTGAAAGATCATGTGTCCCTTGCGCATCATTTTGGTGTTTCTTTCGGGCTTGGTGGCTGGATACTT
TGCCTGGCAAACGTTCCGCACCAAGGAAGACGAAGCCCAAAACCCACCTCAAATCGATTCAAACACAGAAGATGCAGCCTCCCACAAATTGGGACTCTTCAGAAAGGTTCTTGCAGTAATTGTTTCAGCATTTTGGACATTTGTGGAGATGGCAAGTGGAAGATACTTGTGGCAGAACTTGGTCAATCACAGCCACAGAA
CAAATAACAGTTAAATCCTCAAGGCTGTATTGGAGGAAAATGCATATTTCTTTAACTTGTTGTCTCAATGCTATTTGTCTCAGCATTGTAATGTATGTAATGTTTCTTTTTTGAGCACGACAGAGTTTCTGTCTATTGTTTGGTGAGAGGTTCCATCATGTTCTGAAATCTCATGATTGAATGCACTTGTAATAAAGCTG
TCGAACTCAGACATCATGTTGTTGATGAGAAATATAATAGTATCATG


>TRINITY_DN115936_c0_g1_i4 from sample A1 / Example unspliced isoform:
CCCCATTTCTTTGGGTGCCCAAATTGGCAATACCCGATAGGCTGTCATCGGTGTACAAATTTATCTCCATCGGACAGATGgtatgaaattcatgaatcttgtttccactcacattccttctctggaatttcatggataaaacccatttcctcaataaacaattgatgaggaatacttcaaaacacctttagtgggtagct
agtggttggcgtccgctgttgacttggggaaaaggaaatgttatgcaaaccaatgaagtgtgaaggaagaatccattacag
GTTTTGATTTGTGGTACTGGTATTCCAACATTTCAGAAGTCAGTCAATTCTGAGGTGAAAGATCATGTGTCCCTTGCGCATCATTTTGGTGTTTCTTTCGGGCTTGGTGGCTGGATACT
TTGCCTGGCAAACGTTCCGCACCAAGGAAGACGAAGCCCAAAACCCACCTCAAATCGATTCAAACACAGAAGATGCAGCCTCCCACAAATTGGGACTCTTCAGAAAGGTATGTATGGAAAAATCCTATGTATTCTTTTCAGACATCCATATCTTACTAGGACATACCCATCTGATGCCAAAAAAGTCATTCATTTCAGAC
ATTGATGCCTTAGTAGCACAATCCCATCTAAACCCAAGCCTGATATGCATTCCTCTGGGCT




Intron 5 GTATGAATAA ... TGCTTTACAG

SampleRetention score (%)Exon junction reads5'ss reads3'ss reads
A144.2849.13939
A248.9553.13566.8
A338.2177.63957
A452.7149.75060.8
A544.76292423
A642.39453.1313353.5
A739.37421.4208.5338.6
A838.71329.2165250.7
A940.88380.6216.9309.5
A1039.55362.8227.3247.5



>TRINITY_DN115936_c0_g1_i3 from sample A1 / Example spliced isoform
CCCCATTTCTTTGGGTGCCCAAATTGGCAATACCCGATAGGCTGTCATCGGTGTACAAATTTATCTCCATCTGACAGATGGTATGAAATTCATGAATCTTGTTTCCACTCACATTCCTTCTCTGGAATTTCATGGATAAAACCCATTTCCTCAATAAACAATTGATGAGGAATACTTCAAAACACCTTTAGTGGGTAGCT
AGTGGTTGGCGTCCGCTGTTGACTTGGGGAAAAGGAAATGTTATGCAAACCAATGAAGTGTGAAGGAAGAATCCATTACAGGCAGGCATCGATGTTTTGATTTGTGGTACTGGTATTCCAACATTTCAGAAGTCAGTCAATTCTGAGGTGAAAGATCATGTGTCCCTTGCGCATCATTTTGGTGTTTCTTTCGGGCTTGG
TGGCTGGATACTTTGCCTGGCAAACGTTCCGCACCAAGGAAGACGAAGCCCAAAACCCACCTCAAATCGATTCAAACACAGAAGATGCAGCCTCCCACAAATTGGGACTCTTCAGAAAGGTTCTTGCAGTAATTGTTTCAGCATTTTGGACATTTGTGGAGATGGCAAGTGGAAGATACTTGTGGCAGAACTTGGTCAAT
CACAGCCACAGAACAAATAACAGTTAAATCCTCAAGGCTGTATTGGAGGAAAATGCATATTTCTTTAACTTGTTGTCTCAATGCTATTTGTCTCAGCATTGTAATGTATGTAATGTTTCTTTTTTGAGCACGACAGAGTTTCTGTCTATTGTTTGGTGAGAGGTTCCATCATGTTCTGAAATCTCATGATTGAATGCACT
TGTAATAAAGCTGTCGAACTCAGACATCATGTTGTTGATGAGAAATATAATAGTATCATG


>TRINITY_DN115936_c0_g1_i2 from sample A1 / Example unspliced isoform:
CCCCATTTCTTTGGGTGCCCAAATTGGCAATACCCGATAGGCTGTCATCGGTGTACAAATTTATCTCCATCTGACAGATGGTATGAAATTCATGAATCTTGTTTCCACTCACATTCCTTCTCTGGAATTTCATGGATAAAACCCATTTCCTCAATAAACAATTGATGAGGAATACTTCAAAACACCTTTAGTGGGTAGCT
AGTGGTTGGCGTCCGCTGTTGACTTGGGGAAAAGGAAATGTTATGCAAACCAATGAAGTGTGAAGGAAGAATCCATTACAGGCAGGCATCGATgtatgaataaatcaaatgaatgaatgattcaacgagttgaatgtgtggattccgtgtgttccattatctcagtaccaatatcaatccctccacggattgaccttttc
tgacactgttctatatttaaggattcaggaggacatttgatctcatattgctttacagtttttgtttgtggtggtggtaatcgaacatttcattgctttacag
GTTTTGATTTGTGGTACTGGTATTCCAACATTTCAGAAGTCAGTCAATTCTGAGGTGAAAGATCATGTGTCCCTTGCGCATCATTTTGGTGTTTCTT
TCGGGCTTGGTGGCTGGATACTTTGCCTGGCAAACGTTCCGCACCAAGGAAGACGAAGCCCAAAACCCACCTCAAATCGATTCAAACACAGAAGATGCAGCCTCCCACAAATTGGGACTCTTCAGAAAGGTTCTTGCAGTAATTGTTTCAGCATTTTGGACATTTGTGGAGATGGCAAGTGGAAGATACTTGTGGCAGAA
CTTGGTCAATCACAGCCACAGAACAAATAACAGTTAAATCCTCAAGGCTGTATTGGAGGAAAATGCATATTTCTTTAACTTGTTGTCTCAATGCTATTTGTCTCAGCATTGTAATGTATGTAATGTTTCTTTTTTGAGCACGACAGAGTTTCTGTCTATTGTTTGGTGAGAGGTTCCATCATGTTCTGAAATCTCATGAT
TGAATGCACTTGTAATAAAGCTGTCGAACTCAGACATCATGTTGTTGATGAGAAATATAATAGTATCATG




Intron 6 GTATGAAATT ... TGCTTTACAG

SampleRetention score (%)Exon junction reads5'ss reads3'ss reads
A159.09272039
A272.83253067
A363.33331757
A461392061
A563.89131423
A664.1319882354
A761.8620970339
A862.7514939251
A966.67155113310
A1064.5813687248



>TRINITY_DN101519_c0_g1_i3 from sample A4 / Example spliced isoform
CATTTCTTTGGGTGCCCAAATTGGCAATACCCGATAGGCTGTCATCGGTGTACAAATTTATCTCCATCGGACAGATGGTTTTGATTTGTGGTACTGGTATTCCAACATTTCAGAAGTCAGTCAATTCTGAGGTGAAAGATCATGTGTCCCTTGCGCATCATTTTGGTGTTTCTTTCGGGCTTGGTGGCTGGATACTTTGC
CTGGCAAACGTTCCGGACCAAGGAAGACGAAGCCCAAAACCCACCTCAAATCGATTCAAACACAGAAGATGCAGCCTCCCACAAATTGGGACTCTTCAGAAAGGTTCTTGCAGTAATTGTTTCAGCATTTTGGACATTTGTGGAGATGGCAAGTGGAAGATACTTGTGGCAGAACTTGGTCAATCACAGCCACAAAACAA
ATAACAGTTAAATCCTCAAGGCTGTATTGGAGGAAAATGCATATTTCTTTAACTTGTTGTCTCAATGCTATTTGTCTCAGCATTGTAATGTATGTAATGTTTATTTTTTGAGCACGACAGAGTTTCTGTCTATTGTTTGGTGAGAGGTTCCATCATGTTCTGAAATCTCATGATTGAATGCACTTGTAATAAAGCTGTCG
AACTCAGACATCATGTTGTTGATGAGAAATATAATAGTATCATGTGCTATATATGTGTAAGCTTGTGTATTAGAGAGACCATGCAATCCAAAATTTCTACAGCAAAGAAAGTTGAAGGCTTGAAGCTGATTGTCCTGGTAACCCCAAATTAAACATACAGGGAATGACTTAATAGTTAGGTCAATTAATGGTCTTTTATT
CCAATTGGAGCTTATGTACCCCATGTATTTTGTTGGAATGGACTCCTGTAAATGATAAATTTCAGCC


>TRINITY_DN101519_c0_g1_i1 from sample A4 / Example unspliced isoform:
CATTTCTTTGGGTGCCCAAATTGGCAATACCCGATAGGCTGTCATCGGTGTACAAATTTATCTCCATCGGACAGATGgtatgaaattcatgaatcttgtttccactcacattccttctctggaatttcatggataaaacccatttcctcaataaacaattgatgaggaatacttcaaaacacctttagtgggtagctagt
ggttggcgtccgctgttgacttgggaaaaaggaaatgttatgcaaaccaattaagtgtgaaggaagaatccattacaggcaggcatcgatgtatgaataaatcaaatgaatgaatgattcaacgtgttgaatgtgtggattccgtgtgttccattatctcagtaccaatatcaatccctccacggattgaccttttctga
cactgttctatatttaaggattcaggaggacatttgatctcatattgctttacagtttttgtttgtggtggtggtaatcgaacatttcattgctttacag
GTTTTGATTTGTGGTACTGGTATTCCAACATTTCAGAAGTCAGTCAATTCTGAGGTGAAAGATCATGTGTCCCTTGCGCATCATTTTGGTGTTTCTTTCG
GGCTTGGTGGCTGGATACTTTGCCTGGCAAACGTTCCGGACCAAGGAAGACGAAGCCCAAAACCCACCTCAAATCGATTCAAACACAGAAGATGCAGCCTCCCACAAATTGGGACTCTTCAGAAAGGTTCTTGCAGTAATTGTTTCAGCATTTTGGACATTTGTGGAGATGGCAAGTGGAAGATACTTGTGGCAGAACTT
GGTCAATCACAGCCACAAAACAAATAACAGTTAAATCCTCAAGGCTGTATTGGAGGAAAATGCATATTTCTTTAACTTGTTGTCTCAATGCTATTTGTCTCAGCATTGTAATGTATGTAATGTTTATTTTTTGAGCACGACAGAGTTTCTGTCTATTGTTTGGTGAGAGGTTCCATCATGTTCTGAAATCTCATGATTGA
ATGCACTTATAATAAAGCTGTCAAACTC