sp|Q8W4Y5|ASCL_SOLLC ----> ASC1-like protein
Intron 1 GTAAGGTTTT ... TGGTTGGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 14.29 | 48 | 7 | 9 |
| A2 | 19.15 | 19 | 4 | 5 |
| A3 | 10 | 27 | 4 | 2 |
| A4 | 17.78 | 39.3 | 8 | 9 |
| A5 | 18.52 | 11 | 1 | 4 |
| A6 | 14.59 | 79 | 7 | 20 |
| A7 | 15.32 | 94 | 14 | 20 |
| A8 | 14.83 | 74.7 | 11 | 15 |
| A9 | 10.03 | 116.7 | 12 | 14 |
| A10 | 17.02 | 109.7 | 20 | 25 |
>TRINITY_DN40420_c0_g2_i1 from sample A8 / Example spliced isoformGCAAATTCCCCTGCCTTGGATACAGATGGTGCTGGACCAGTGAGACCATGCACATCCTCTCATTTAATGACTGGAAGATCTGCTTCCACAAGGCCATAGAATTGTACTGGCTTTCAGTGTGGATCAGCCAACCAGACCTCGTTTAGCATCAGACTTCTAAGTTCTATTACTAGATTCTTCTCAGCGAACTTCTAGGAGAA
CTTCTATTAACTGTTTTCAGTTTCCTCCTTGGATCACCCAGGCAGGCCCTGTTAGCCCTGGGTACTCCCCTAATGACAGTGCCAGAGTCTAGGAAGGTGGCTTGTCCTGGGCTCTACAAAAGGCTCGCAGGAAGATGTACGAGCAGATCACAAGAAACGCCATACAAAGTTTAAAGAGTCTGCTTGGAAGTGTTTGTATT
ACTTTTCAGCAGAATCACTGGCACTGGCAGTCACTTACAATGAGCCATGGTTCACAAATACACACAGCTTTTGGGTTGGACCGGGTGACCAGATGTGGCCAGATCAAAAAGTGAAGACAAAGTTAAAGCTACTGTACATGTATGCAGCAGGGTTCTATACATACAGTATTTTTGCTTTGATTTTTTGGGAGACCAGGCGA
TTGGATTTTGGAGTGACCATGTCTCATCATGTAGCAACTGTGATTCTCATTTTAGCATCATATTTGCTAAGGTTTTCACGAGTTGGCTCTATTGTTCTAGCCATACATGATGCAAGTGATGTGCTTTTGGAAATCAGCAAGATGTTTAAATACAGCGGGTCTACCGTGATACCTAGCATTGCGTTTATCCTTTTTGCGAT
TTCATGGGTTGTGCTTCGTCTTATATACTTTCCCTTCTGGATTATTTGGAGCACAAGTTATGAAGTTCTTCTTACTTTGGATACAGACAAGCACAAGATAGAAGGTCCTATTTACTACTATATCTTCAACTCACTCCTCATATGCTTGCTTGTCCTTCACATTTACTGGTGGGTTTTGATATACCGCATGGTTGTTCGAC
AAATCAAGGAAAAAGGAAAAATTAGTGAAGATCTTAGATCAGATTCTGAATCCGAGGACAAGGAAGATTGAGATTGTCTAAACAAGCATCATTTCGAGTGTCAGGATGAGAGTCCTATTCTCCAGATGAGGGCCATGATCACTCATTTGTGCACTCAAATGTACAGTTAAATGTGGAACATTTGAACTTCTTTTGTATGA
ATCACCTTATCCAAGAATTATATTAAGGAGATGCAAGGTAGTTCTCTGCTGCTATATTTGGATGAGTAATGTTGGAGCTTTTCTTAGATTGAAACATTTTTGTTGGAAAACAACATATTTATTGTCACGGTCTATTGCCCTGAAGGATGGGTGTGCCGCTGCTACAGTTGTATTTCATAATTTATCAGCAGCCTGAATGC
CCTTCAGCAAAGTCCTGTTCATCAAAGTCCCGTTTTATTATAGTTCTCTATATTTTACTATCGTGTTTAACATTCCTAGCAGCCTATCTTGATTATGCTTGTTTATTTATTGAAGGTGATATTTGAACTTCTTTTGTATGAAT
>TRINITY_DN40420_c0_g2_i9 from sample A8 / Example unspliced isoform:GTTTAGAAAAGCCAAGTTAAAGTTGGAGGTACAGAGTACGAATCTGGGTGCCTGGGTTTGGCAGATTTCGCCATTGGTGAGCCAGCGTATATGCAGAGCTATATATTGCACAGCTAATGGCAATGACAAGGGCATTTCAGTGGCCAGATTGGGAATATGAAGAATATCCTTCGAAGGAAGATGTTCCGATGGCGCTCTTA
TTTGCTCTGCTTTTCCCCATTCTCAGGTTGTTGCTGGACAGGCTTATTCTGGAGAGTCTAGGAAGGTGGCTTGTCCTGGGCTCTACAAAAGGCTCGCAGGAAGATGTACGAGCAGATCACAAGAAACGCCATACAAAGTTTAAAGAGTCTGCTTGGAAGTGTTTGTATTACTTTTCAGCAGAATCACTGGCACTGGCAGT
CACTTACAATGAGCCATGGTTCACAAATACACACAGCTTTTGGGTTGGCCCAGGTGACCAGATGTGGCCAGATCAAAAAGTGAAgtaaggttttccgtgtttaatattggttgtgttatatgtaaaagatcattttagatgctctcgttattgtaaagaaactaatttctattaggagaataactgacatgggattggtg
ttgcacttgaccttattgttattctgcaatgaaatggttggcagGACAAAGTTAAAGCTACTGTACATGTATGCAGCAGGGTTCTATACATACAGTATTTTTGCTTTGATTTTTTGGGAGACCAGGCGATTGGATTTTGGAGTGACCATGTCTCATCATGTAGCAACTGTGATTCTCATTTTAGCATCATATTTGCTAAG
GTTTTCACGAGTTGGCTCTATTGTTCTAGCCATACATGATGCAAGTGATGTGCTTTTGGAAATCAGCAAGATGTTTAAATACAGCGGGTCTACCGTGATACCTAGCATTGCGTTTATCCTTTTTGCGATTTCATGGGTTGTGCTTCGTCTTATATACTTTCCCTTCTGGATTATTTGGAGCACAAGTTATGAAGTTCTTC
TTACTTTGGATACAGACAAGCACAAGATAGAAGGTCCTATTTACTACTATATCTTCAACTCACTCCTCATATGCTTGCTTGTCCTTCACATTTACTGGTGGGTTTTGATATACCGCATGGTTGTTCGACAAATCAAGGAAAAAGGAAAAATTAGTGAAGATCTTAGATCAGATTCTGAATCCGAGGACAAGGAAGATTGA
GATTGTCTAAACAAGCATCATTTCGAGTGTCAGGATGAGAGTCCTATTCTCCAGATGAGGGCCATGATCACTCATTTGTGCACTCAAATGTACAGTTAAATGTGGAACATTTGAACTTCTTTTGTATGAATCACCTTATCCAAGAATTATATTAAGGAGATGCAAGGTAGTTCTCTGCTGCTATATTTGGATGAGTAATG
TTGGAGCTTTTCTTAGATTGAAACATTTTTGTTGGAAAACAACATATTTATTGTCACGGTCTATTGCCCTGAAGGATGGGTGTGCCGCTGCTACAGTTGTATTTCATAATTTATCAGCAGCCTGAATGCCCTTCAGCAAAGTCCTGTTCATCAAAGTCCCGTTTTATTATAGTTCTCTATATTTTACTATCGTGTTTAAC
ATTCCTAGCAGCCTATCTTGATTATGCTTGTTTATTTATTGAAGGTGATATTTGAACTTCTTTTGTATGAAT
Intron 2 GTTCCGGGCT ... TCTGTCGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 66.67 | 2 | 4 | 0 |
| A2 | 25 | 9 | 3 | 0 |
| A3 | 41.67 | 7 | 5 | 0 |
| A4 | 57.14 | 6 | 8 | 2 |
| A5 | 50 | 1 | 1 | 0 |
| A6 | 41.67 | 7 | 5 | 0 |
| A7 | 48.65 | 19 | 18 | 0 |
| A8 | 47.83 | 12 | 11 | 0 |
| A9 | 47.06 | 9 | 8 | 0 |
| A10 | 40 | 6 | 4 | 0 |
>TRINITY_DN99083_c13_g2_i6 from sample A4 / Example spliced isoformGTACATGTATGCAGCAGGGTTCTGAGTTTAGAAAAGCCAAGTTAAAGTTGGAGGTACAGAGTACGAATCTGGGTGCCTGGGTTTGGCAGATTTCGCCATTGGTGAGCCAGCGTATATGCAGAGCTATATATTGCACAGCTAATGGCAATGACAAGGGCATTTCAGTGGCCAGATTGGGAATATGAAGAATATCCTTCGAA
GGAAGATGTTCCGATGGCGCTCTTATTTGCTCTGCTTTTCCCCATTCTCAGGTTGTTGCTGGACAGGCTTATTCTGGAGTTTGATTATGAACATTTGTTTTACAACCTTTGCTTGCGTGCAAGCATGTGTCCACG
>TRINITY_DN99083_c13_g2_i5 from sample A4 / Example unspliced isoform:GTACATGTATGCAGCAGGGTTCTGAGTTTAGAAAAGCCAAGTTAAAGTTGGAGGTACAGAGTACGAATCTGGGTGCCTGGGTTTGGCAGATTTCGCCATTGGTGAGCCAGCGTATATGCAGAGCTATATATTGCACAGCTAATGGCAATGACAAGGGCATTTCAGTGGCCAGATTGGGAATATGAAGAATATCCTTCGAA
GGAAGATGTTCCGATGGCGCTCTTATTTGCTCTGCTTTTCCCCATTCTCAGGTTGTTGCTGGACAGGCTTATTCTGGAGgttccgggctacttaattcagttcagtttgcttcatcttttttccccatcgtaagtgatgcttcatcattaccaaagaagaattagcaaccatacactgtcccagattcagtcactcagat
cacttagtaaaaagtatgttctgtcgcagTTTGATTATGAACATTTGTTTTACAACCTTTGCTTGCGTGCAAGCATGTGTCCACG
Intron 3 GCATGATGTT ... GAGCTTTGAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 64.71 | 6 | 11 | 1 |
| A2 | 50 | 6 | 6 | 0 |
| A3 | 57.89 | 8 | 11 | 0 |
| A4 | 57.89 | 8 | 11 | 1 |
| A5 | 80 | 1 | 4 | 0 |
| A6 | 54.17 | 22 | 26 | 3 |
| A7 | 51.92 | 25 | 27 | 5 |
| A8 | 57.81 | 27 | 37 | 8 |
| A9 | 55.1 | 22 | 27 | 3 |
| A10 | 53.19 | 22 | 25 | 1 |
>TRINITY_DN42189_c0_g3_i1 from sample A9 / Example spliced isoformGTTTAGAAAAGCCAAGTTAAAGTTGGAGGTACAGAGTACGAATCTGGGTGCCTGGGTTTGGCAGATTTCGCCATTGGTGAGCCAGCGTATATGCAGAGCTATATATTGCACAGCTAATGGCAATGACAAGGGCATTTCAGTGGCCAGATTGGGAATATGAAGAATATCCTTCGAAGGAAGATGTTCCGATGGCGTTCTTA
TTTGCTCTGCTTTTCCCCATTCTCAGGTTGTTGCTGGACAGGCTTATTCTGGAGAGTCTAGGAAGGTGGCTTGTCCTGGGCTCTACAAAAGGCTCGCAGGAAGATGTACGAGCAGATCACAAGAAACGCCATACAAAGTTTAAAGAGTCTGCTTGGAAGTGTTTGTATTACTTTTCAGCAGAATCACTGGCACTGGCAGT
CACTTACAATGAGCCATGGTTCACAAATACACACAGCTTTTGGGTTGGACCGGGTGACCAGATGTGGCCAGATCAAAAAGTGAAGACAAAGTTAAAGCTACTGTACATGTATGCAGCAGGGTTCTATACATACAGTATTTTTGCTTTGATTTTTTGGGAGACCAGGCGATTGGATTTTGGAGTGACCATGTCTCATCATG
TAGCAACTGTGATTCTCATTTTAGCATCATATTTGCTAAGGTTTTCACGAGTTGGCTCTATTGTTCTAGCCATACATGATGCAAGTGATGTGCTTTTGGAAATCAGCAAGATGTTTAAATACAGCGGGTCTACCGTGATACCTAGCATTGCGTTTATCCTTTTTGCGATTTCATGGGTTGTGCTTCGTCTTATATACTTT
CCCTTCTGGATTATTTGGAGCACAAGGGCATATTATATTTCATTGGCACTTCAAAATGAAGCTGGTGGGATGATCAAAGGAGAAACAAATCTCATGAATGCTGCAATTGGAAGCTGTAGCTTTACTTGACTAGCCAAAAGTCACTGCATGGTGCTTATGGCACATTCTTTGGATGATAATAACGTCTAGCCCTTAGTAGT
AGGAATTGTAACATTACATATGTTCGATTGATCCTCTAAATTTTATGAAGTTATATTGTCCAATTGCATGCATTCCTATAAAATTGTATGCCAGGATAGAGGCCAGAACACAGTCTTTGTTCATAACATGCTGGTTTTCATAATGGCAATCCTCTAGGGAATCAAAGCAAATACCATGAATAGAAAACTGTTGGAAGAAG
TGACCTGAACAGTGAAGACCAGAAGACTATCTATCAATTAGACATTAGAAATAAACCATTTATCTATCACTGGATTCGCTACCTATTCCAATTCGTTGTTTATTATAAAGGTTTTACATATACAA
>TRINITY_DN42189_c0_g3_i6 from sample A9 / Example unspliced isoform:GTTTAGAAAAGCCAAGTTAAAGTTGGAGGTACAGAGTACGAATCTGGGTGCCTGGGTTTGGCAGATTTCGCCATTGGTGAGCCAGCGTATATGCAGAGCTATATATTGCACAGCTAATGGCAATGACAAGGGCATTTCAGTGGCCAGATTGGGAATATGAAGAATATCCTTCGAAGGAAGATGTTCCGATGGCGTTCTTA
TTTGCTCTGCTTTTCCCCATTCTCAGGTTGTTGCTGGACAGGCTTATTCTGGAGAGTCTAGGAAGGTGGCTTGTCCTGGGCTCTACAAAAGGCTCGCAGGAAGATGTACGAGCAGATCACAAGAAACGCCATACAAAGTTTAAAGAGTCTGCTTGGAAGTGTTTGTATTACTTTTCAGCAGAATCACTGGCACTGGCAGT
CACTTACAATGAGCCATGGTTCACAAATACACACAGCTTTTGGGTTGGACCGGGTGACCAGATGTGGCCAGATCAAAAAGTGAAGACAAAGTTAAAGCTACTGTACATGTATGCAGCAGGGTTCTATACATACAGTATTTTTGCTTTGATTTTTTGGGAGACCAGGCGATTGGATTTTGGAGTGACCATGTCTCATCATG
TAGCAACTGTGATTCTCATTTTAGCATCATATTTGCTAAGGTTTTCACGAGTTGGCTCTATTGTTCTAGCCATACATGATGCAAGTGATGTGCTTTTGGAAATCAGCAAGATGTTTAAATACAGCGGGTCTACCGTGATACCTAGCATTGCGTTTATCCTTTTTGCGATTTCATGGGTTGTGCTTCGTCTTATATACTTT
CCCTTCTGGATTATTTGGAGCACAAGgcatgatgtttcttccgattgctgagctttgagGGCATATTATATTTCATTGGCACTTCAAAATGAAGCTGGTGGGATGATCAAAGGAGAAACAAATCTCATGAATGCTGCAATTGGAAGCTGTAGCTTTACTTGACTAGCCAAAAGTCACTGCATGGTGCTTATGGCACATTC
TTTGGATGATAATAACGTCTAGCCCTTAGTAGTAGGAATTGTAACATTACATATGTTCGATTGATCCTCTAAATTTTATGAAGTTATATTGTCCAATTGCATGCATTCCTATAAAATTGTATGCCAGGATAGAGGCCAGAACACAGTCTTTGTTCATAACATGCTGGTTTTCATAATGGCAATCCTCTAGGGAATCAAAG
CAAATACCATGAATAGAAAACTGTTGGAAGAAGTGACCTGAACAGTGAAGACCAGAAGACTATCTATCAATTAGACATTAGAAATAAACCATTTATCTATCACTGGATTCGCTACCTATTCCAATTCGTTGTTTATTATAAAGGTTTTACATATACAA
Intron 4 GTAAAATCCA ... TTTGCCAAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 48.39 | 48 | 32 | 58 |
| A2 | 44.44 | 40 | 12 | 52 |
| A3 | 52.2 | 38 | 24 | 59 |
| A4 | 43.7 | 38 | 21 | 38 |
| A5 | 52.94 | 24 | 10 | 44 |
| A6 | 48.62 | 93 | 66 | 110 |
| A7 | 45.89 | 112 | 75 | 115 |
| A8 | 40.36 | 99 | 48 | 86 |
| A9 | 43.1 | 136 | 86 | 120 |
| A10 | 40.91 | 104 | 52 | 92 |
>TRINITY_DN105804_c0_g1_i9 from sample A2 / Example spliced isoformGAGAGGGTGAGGTGGTTGATACATAGCTCTTTGATTGGAATTCCGATTTTCAGTTGATCAGTAATCTACCTAATTCCACCATATTCTTGGATTCAATCTAAGAGTATATTCCGATCCTTGCAGCCCATGGATCTTAGGTCACTTCTACACCAAAGAACCAAATCGAACCCTTCTTCACATGGCCGTCTGATTCCCACCCT
TCAAATCTTTGACCTTCCATGTATGACATCTCAAACTGCCATTCTCTTCGGTCCAAATTTCCCATATCGTTTTATTGAATAGTTTAGAAAGTACTAGACACACTGCCCAACACAGAATCCCTTTATAAGAGGAAGAAAAAGATTAAGGTTCATGCCAGTTTTACTCAACACAGGATGAGCTGGATAGACTGGGAGAGCGA
GGCGTATCCCTCCAATGAAGACCTTCTTATGGTCCCTGGCTTTGCTCTCTTCTTCCCCGTAGTGCGATTCTTTCTCGACAGATTTATATTCGAGCGATTAGCAAGAAGATTTGTGGCAGGCTCTGTAAAAGGGGCATCTCAGGATCAGCAAGATGAATGCAACAAACGACACATTAAGTTCAAGGAGTCTGCATGGAAAT
GTATATATTATTTATCAGCAGAGATTATAGCGCTAGCAGTGACATACAATGAGCCATGGTTCACAAATACAGGAAATTTTTGGGTTGGACCAGGGAACCAGGTCTGGCCAGATCAGAAAGTGAAGACAAAATTAAAGGCATTGTACATGTACACGGCAGGATTCTATACATATGGTATTTTTGCGTTGATTTTCTGGGAA
ACAAGGCGGAGAGACTTTGGAGTGAGCATGGCTCATCATGTGGCAACTGTTACTCTGATTATATTGTCATACTTGCTAAGGTTCGCAAGAGTGGGATCCATTGTTTTGGCGCTCCATGATGCAAGTGATGTGTTCTTAGAAATTGGCAAAATGTTCAAATACAATGGTTCTAACATTGTCCCGAGTATTTCTTTTATCCT
TTTTGTCATTTCTTGGATCGTGCTTCGGCTTATTTATTATCCTTTATGGATCCTTTGGAGCACAAGTTATGAAGTTCTTCATACTTTGGACAAAAAGAAGCATCAGAAAGAAGGACCCATATACTACTACGTCTTCAATTCACTACTTTACTGTTTGCTAGTCATCCACATTTATTGGTGGGTTTTAATGTATCGAATGC
TTGTTAAGCAGATCAAGGCAAGAGGCAAGCTTGGGGAAGACGTTAGATCAGATTCTGAAGGTGAGGATGACAAACAAGATTGAAAGAGGAGAAGCATGACTTAATTGGACAAGAATGGACAGTTGAAGATGGAAGACGTGCAAGTGCAACTTTTTTGGGAAAGCGTTGCTGTTCCTTTGGATGAGAACCCAAGCCATTTG
AAAGTGCAGTTAAAACATAATTTGATGCTGCCAAAATTACCAGTGTCTGAAAGTCAATAATGCTTAGGCTGCATTATTTATTGGATGACTATCAATTGTTCTATCCATATACAGATCAGACGAGGAACACAACCATGGTTTTTTTACTTGGATGTGAACTGTATGATTCTTTGTTGCAGAAGTTGATTTACATATGAGAC
ATTGCAACTGTATAGTTGCAACTTTATTTTTTATTCATTTATGGCTCTGCATGTCAATGCCCAAATGGGATTTCTCCTACCCAGTTCTCTAGTTCTTAATTTTTTACTTAAGTGTCATAATCTTCTGTTTAGTATTCAGTCTGCC
>TRINITY_DN105804_c0_g1_i8 from sample A2 / Example unspliced isoform:GAGAGGGTGAGGTGGTTGATACATAGCTCTTTGATTGGAATTCCGATTTTCAGTTGATCAGTAATCTACCTAATTCCACCATATTCTTGGATTCAATCTAAGAGTATATTCCGATCCTTGCAGCCCATGGATCTTAGGTCACTTCTACACCAAAGAACCAAATCGAACCCTTCTTCACATGGCCGTCTGATTCCCACCCT
TCAAATCTTTGACCTTCCATGTATGACATCTCAAACTGCCATTCTCTTCGGTCCAAATTTCCCATATCGTTTTATTGAATAGTTTAGAAAGTACTAGACACACTGCCCAACACAGAATCCCTTTATAAGAGGAAGAAAAAGATTAAGgtaaaatccattggatctgatccgcttcgtttgctcagttttatgctcagcac
cattctgtagattttgccaaagGTTCATGCCAGTTTTACTCAACACAGGATGAGCTGGATAGACTGGGAGAGCGAGGCGTATCCCTCCAATGAAGACCTTCTTATGGTCCCTGGCTTTGCTCTCTTCTTCCCCGTAGTGCGATTCTTTCTCGACAGATTTATATTCGAGCGATTAGCAAGAAGATTTGTGGCAGGCTCTG
TAAAAGGGGCATCTCAGGATCAGCAAGATGAATGCAACAAACGACACATTAAGTTCAAGGAGTCTGCATGGAAATGTATATATTATTTATCAGCAGAGATTATAGCGCTAGCAGTGACATACAATGAGCCATGGTTCACAAATACAGGAAATTTTTGGGTTGGACCAGGGAACCAGGTCTGGCCAGATCAGAAAGTGAAG
ACAAAATTAAAGGCATTGTACATGTACACGGCAGGATTCTATACATATGGTATTTTTGCGTTGATTTTCTGGGAAACAAGGCGGAGAGACTTTGGAGTGAGCATGGCTCATCATGTGGCAACTGTTACTCTGATTATATTGTCATACTTGCTAAGGTTCGCAAGAGTGGGATCCATTGTTTTGGCGCTCCATGATGCAAG
TGATGTGTTCTTAGAAATTGGCAAAATGTTCAAATACAATGGTTCTAACATTGTCCCGAGTATTTCTTTTATCCTTTTTGTCATTTCTTGGATCGTGCTTCGGCTTATTTATTATCCTTTATGGATCCTTTGGAGCACAAGTTATGAAGTTCTTCATACTTTGGACAAAAAGAAGCATCAGAAAGAAGGACCCATATACT
ACTACGTCTTCAATTCACTACTTTACTGTTTGCTAGTCATCCACATTTATTGGTGGGTTTTAATGTATCGAATGCTTGTTAAGCAGATCAAGGCAAGAGGCAAGCTTGGGGAAGACGTTAGATCAGATTCTGAAGGTGAGGATGACAAACAAGATTGAAAGAGGAGAAGCATGACTTAATTGGACAAGAATGGACAGTTG
AAGATGGAAGACGTGCAAGTGCAACTTTTTTGGGAAAGCGTTGCTGTTCCTTTGGATGAGAACCCAAGCCATTTGAAAGTGCAGTTAAAACATAATTTGATGCTGCCAAAATTACCAGTGTCTGAAAGTCAATAATGCTTAGGCTGCATTATTTATTGGATGACTATCAATTGTTCTATCCATATACAGATCAGACGAGG
AACACAACCATGGTTTTTTTACTTGGATGTGAACTGTATGATTCTTTGTTGCAGAAGTTGATTTACATATGAGACATTGCAACTGTATAGTTGCAACTTTATTTTTTATTCATTTATGGCTCTGCATGTCAATGCCCAAATGGGATTTCTCCTACCCAGTTCTCTAGTTCTTAATTTTTTACTTAAGTGTCATAATCTTC
TGTTTAGTATTCAGTCTGCC
Intron 5 GTTTTCACGA ... GGAGCACAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 71.43 | 12 | 20 | 40 |
| A2 | 70.97 | 9 | 16 | 28 |
| A3 | 80.25 | 8 | 27 | 38 |
| A4 | 80.95 | 4 | 14 | 20 |
| A5 | 83.33 | 1 | 3 | 7 |
| A6 | 78.04 | 28 | 100 | 99 |
| A7 | 74.85 | 42 | 140 | 110 |
| A8 | 68.56 | 58 | 108 | 145 |
| A9 | 72.59 | 37 | 106 | 90 |
| A10 | 82.8 | 16 | 76 | 78 |
>TRINITY_DN115410_c1_g2_i1 from sample A1 / Example spliced isoformCCGCATTGCAAGACTTTTGTTAGAGTTTAGAAAAGCCAAGTTAAAGTTGGAGGTACAGAGTACGAATCTGGGTGCCTGGGTTTGGCAGATTTCGCCATTGGTGAGCCAGCGTATATGCAGAGCTATATATTGCACAGCTAATGGCAATGACAAGGGCATTTCAGTGGCCAGATTGGGAATATGAAGAATATCCTTCGAAG
GAAGATGTTCCGATGGCGCTCTTATTTGCTCTGCTTTTCCCCATTCTCAGGTTGTTGCTGGACAGGCTTATTCTGGAGAGTCTAGGAAGGTGGCTTGTCCTGGGCTCTACAAAAGGCTCGCAGGAAGATGTACGAGCAGATCACAAGAAACGCCATACAAAGTTTAAAGAGTCTGCTTGGAAGTGTTTGTATTACTTTTC
AGCAGAATCACTGGCACTGGCAGTCACTTACAATGAGCCATGGTTCACAAATACACACAGCTTTTGGGTTGGACCGGGTGACCAGATGTGGCCAGATCAAAAAGTGAAGACAAAGTTAAAGCTACTGTACATGTATGCAGCAGGGTTCTATACATACAGTATTTTTGCTTTGATTTTTTGGGAGACCAGGCGATTGGATT
TTGGAGTGACCATGTCTCATCATGTAGCAACTGTGATTCTCATTTTAGCATCATATTTGCTAAGTTATGAAGTTCTTCTTACTTTGGATACAGACAAGCACAAGATAGAAGGTCCTATTTACTACTATATCTTCAATTCACTCCTCATATGCTTGCTTGTTCTTCACATTTACTGGTGGGTTTTGATATACCGCATGGTT
GTCCGACAAATCAAGGAAAAAGGAAAAATTAGTGAAGATCTTAGATCAGATTCTGAATCCGAGGACAAGGAAGATTGAGATTGTCTAAACAAGCATCATTTCGAGTGTCAGGATGAGAGTCCTATTCTCCAGATGAGGGCCATGATCACTCATTTGTGCACTCAAATGTACAGTTAAATGTGGAACATTTGAACTTCTTT
TGTATGAATCACCTTATCCAAGAATTATATTAAGGAGATGCAAGGTAGTTCTCTGCTGCTATATTTGGATGAGTAATGTTGGAGCTTTTCTTAGATTGAAACATTTTTGTTGGAAAACAACATATTTATTGTCACGGTCTATTGCCCTGAAGGATGGGTGTGCCGCTGCTACAGTTGTATTTCATAATTTATCAGCAGCC
TGAATGCCCTTCAGCAAAGTCCTGTTCATCAAAGTCCCGTTTTATTATAGTTCTCTATATTTTACTATCGTGTTTAACATTCCTAGCAGCCTATCTTGATTATGCTTGTTTATTTATTGAAGGTGATATTTGAACTTCTTTTGTATGAAT
>TRINITY_DN115410_c1_g2_i3 from sample A1 / Example unspliced isoform:ATTGGCACCTTCACAGTGATTCAGGCGACAGCAGATACTTCTTCTCCCTCGTCTACCTTTACATCTATACCTAATGATGAGTAGTTCTTCTTTTGTTATTTACTTGTACTTTTTTACTCACTGGTATCCTTATTCTTTTAGTTTTCAGGAGTAGCCTTGGCATTCCCATAGTACATTGTTACTAGTCGTACTTTGAGTAC
CATTGACCTACTTTGGTCATTCATGGACATTGATAAAAATTTCTTATCTTATTTGGAGTGGAATGACCAAGTGGTCACTTTATCTGTTGTGAGAAAATATTTCTTTGACCAAAGTTATTTTTAATGCAGTCAAAACTAGCATTTATTCAGTTATGAAACAATATGCACAAGCTTGAAGTTTTTCTCATATATCAAGGTTT
GCAGAGTCTAGGAAGGTGGCTTGTCCTGGGCTCTACAAAAGGCTCGCAGGAAGATGTACGAGCAGATCACAAGAAACGCCATACAAAGTTTAAAGAGTCTGCTTGGAAGTGTTTGTATTACTTTTCAGCAGAATCACTGGCACTGGCAGTCACTTACAATGAGCCATGGTTCACAAATACACACAGCTTTTGGGTTGGAC
CGGGTGACCAGATGTGGCCAGATCAAAAAGTGAAGACAAAGTTAAAGCTACTGTACATGTATGCAGCAGGGTTCTATACATACAGTATTTTTGCTTTGATTTTTTGGGAGACCAGGCGATTGGATTTTGGAGTGACCATGTCTCATCATGTAGCAACTGTGATTCTCATTTTAGCATCATATTTGCTAAGgttttcacga
gttggctctattgttctagccatacatgatgcaagtgatgtgcttttggaaatcagcaagatgtttaaatacagcgggtctaccgtgatacctagcattgcgtttatcctttttgcgatttcatgggttgtgcttcgtcttatatactttcccttctggattatttggagcacaagTTATGAAGTTCTTCTTACTTTGGA
TACAGACAAGCACAAGATAGAAGGTCCTATTTACTACTATATCTTCAATTCACTCCTCATATGCTTGCTTGTTCTTCACATTTACTGGTGGGTTTTGATATACCGCATGGTTGTCCGACAAATCAAGGAAAAAGGAAAAATTAGTGAAGATCTTAGATCAGATTCTGAATCCGAGGACAAGGAAGATTGAGATTGTCTAA
ACAAGCATCATTTCGAGTGTCAGGATGAGAGTCCTATTCTCCAGATGAGGGCCATGATCACTCATTTGTGCACTCAAATGTACAGTTAAATGTGGAACATTTGAACTTCTTTTGTATGAATCACCTTATCCAAGAATTATATTAAGGAGATGCAAGGTAGTTCTCTGCTGCTATATTTGGATGAGTAATGTTGGAGCTTT
TCTTAGATTGAAACATTTTTGTTGGAAAACAACATATTTATTGTCACGGTCTATTGCCCTGAAGGATGGGTGTGCCGCTGCTACAGTTGTATTTCATAATTTATCAGCAGCCTGAATGCCCTTCAGCAAAGTCCTGTTCATCAAAGTCCCGTTTTATTATAGTTCTCTATATTTTACTATCGTGTTTAACATTCCTAGCA
GCCTATCTTGATTATGCTTGTTTATTTATTGAAGGTGATATTTGAACTTCTTTTGTATGAAT