NA ----> NA
Intron 1 GTATGTTTTT ... TGTAAGATAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 100 | 0 | 20 | 15 |
| A2 | 100 | 0 | 8 | 5 |
| A3 | 77.27 | 5 | 17 | 5 |
| A4 | 60 | 2 | 3 | 4 |
| A5 | 100 | 0 | 7 | 4 |
| A6 | 82.5 | 7 | 33 | 4 |
| A7 | 84.21 | 9 | 48 | 12 |
| A8 | 82 | 9 | 41 | 5 |
| A9 | 79.31 | 12 | 46 | 13 |
| A10 | 83.33 | 5 | 25 | 6 |
>TRINITY_DN46187_c2_g1_i4 from sample A8 / Example spliced isoformAGCTCATTAATATATTACCTTTTCTACCATATTCGTCTTCATGTCTTTGCTTATTTTTATATATATATTTTATAATATGTTGTCTAACAGTGGTATCAGAGCGAGGGTCTAAAGGCCTGGACATGAAAGGAGGAAGCCCGCTGTAACAGTGGTATCAGAGCGGGTGAAGGTAATAGAAGGTAACAGAGGACAGAGGACGA
AGAATGGAATATCTGGTAGAGGCTCACATTCCTTGAAGGTCAGTGTGGATTGTGAAGGTGCGCAGAGAAAGAAGAGATGAGGTTGAACTGTTGAAAGTGTTCAAGAAAAGAGGCCTTTCCGCTCGAGATTTGCCCAAGATCCAAGGAGCAGAGAGATAGAGACACCCATTTCAAGAATTGTGAACCAACTGATGCATAGA
AGCAGTCAAGAAAGCCGTGAAGAACCTATCATATCGAAGGTGAAATCTCACAAGCTTGTGGTCAATCCATGAGGTCCGGATGAAATGCAAATGAGAAAATCGTATTGGTGCTATGGTTTTCCATTTTTCCATGAAGGAAGTCGAGCATCAACTTTTGGTTGAAAAGCATGCAAATATGTAATATTGTTTGTTGGTATTGC
TGTGAACAATTTATTGAAGAAGACTTGATATAATTTGAGCAAATGTATGCCAGTGCACACAATGAGGAGCCAAGAGGATGGCGTTGAAGAAAAGGGGGAAGGCCGAGACCATTGCGTTGGTTTCTCCATTATGAAGGAACATTCACT
>TRINITY_DN46187_c2_g1_i1 from sample A8 / Example unspliced isoform:AGCTCATTAATATATTACCTTTTCTACCATATTCGTCTTCATGTCTTTGCTTATTTTTATATATATATTTTATAATATGTTGTCTAACAGTGGTATCAGAGCGAGGGTCTAAAGGCCTGGACATGAAAGGAGGAAGCCCGCTGTAACAGTGGTATCAGAGCGGGTGAAGGTAATAGAAGGTAACAGAGGACAGAGGACGA
AGAATGGAATATCTGGTAGAGGCTCACATTCCTTGAAGGTCAGTGTGGATTGTGAAGGTGCGCAGAGAAAGAAGAGATGAGGTTGAACTGTTGAAAGTGTTCAAGAAAAGAGGCCTTTCCGCTCGAGATTTGCCCAAGATCCAAGGAGCAGAGAGATAGAGACACCCATTTCAAGAATTGTGAACCAACTGATGCATAGA
AGCAGTCAAGAAAGCCGTGAAGAACCTATCATATCGAAGGTGAAATCTCACAAGCTTGTGGTCAATCCATGAGGTCCGGATGAAATGCAAATGAGAAAATCGTATTGGTGCTATGGTTTTCCATTTTTCCATGAAGGAAGTCGAGCATCAACTTTTGGTTGAAAAGCATGCAAATATGTAATATTGTTTGTTGGTATTGC
TGTGAACAATTTATTGAAGAAGACTTGATATAATTTGAGCAAATGTATGCCAGTGCACACAATGAGgtatgttttttaagttttgtctttaaattatgccgttgtaaagaagatatttgtggaagatgatgagagtcatagcaggagcccacctgattgagatgtagcatgataaatacccattcgcttgagttatagca
atcaaatttgcaagaacggtttttagtttgttaaaggttgctgcacgcagactctgttgaaactagtactgtacatgtttaatgtcgctgtaattaaagaaatgaagaaggcattttcttggtgatgaaagtctcaaatgatgaatagaaagatttctggtacatgaagcaatttttgccgaagtttgccatcactattg
ttaaatgatctataactcatcttttcatttatatctctgtaagatagGAGCCAAGAGGATGGCGTTGAAGAAAAGGGGGAAGGCCGAGACCATTGCGTTGGTTTCTCCATTATGAAGGAACATTCACTGTAAGTAGGAACTGCATGTGTTAATAGTACATGTATATCCTTATTATTCACAAAATATTTGAAGTGCATGCT
CAACTGGGTCCAAAACCGCTTATTAAAGAAGAAATTGATACCTGCAACTTCATCTCCTATGATTGATAGAGTGCTCCTGTCATTCTACTTGCAAGAAATGGAACCAATATGAAGTTGGTTTGTTAGTTCAAACAAAAGAAAGTACAAAGCTGTTAGAGAAACTAATTGCAACAGACATCCAGTCACTTTCATGTGGATAG
TCGCTAAAGGACTGTAGTCACTCATGACTCTGAGGGAAAGTATGCTGTATAAAAATGTTTCATTTAATATATTGGGCAGTTATGACCTCATGGGCCTTGCTTGAAAGACCTGGTGTGAAATTTATAATATGATGACATGGATCATGTAAATTGTTGGTCGTGTATGAGAGAAGGAGGTCTGTAGCAGGATTGTAGCCCAG
TCATGCTGAATTAAAATTCGTCGTTTGAAGAAGCCTGCCTATATTGCTGGTGATTGTTGGTGCTTTCAATGAGAGACACTGAGAATGTATGTGCGTGGAGAAAACCTGAAGGAAAGAAACGAATGCGCTAATAGCATGCCCAACCCAGTCGTAAAAGATGAGATCGCTACATAAAAGGAGTTAGTTAACATCAAAATTTG
CAATTCAAGTTAATTGGCAGATTGGCCAAACATTTTCTGTAGCCTCCTCCACACGAGTAGAAATGAACTATTGTTCTCTATGCGATTGATTGACCAATGCGCGAAGAAGTTTGAGCAGAACGATCAGAGGTGGAGTCTCATGATTTCAAAGATTGAAGATATTGCAACTAGATTGAATATTGCAGCTGCGTTATTGAGCA
CAGATTGAAGATATTACAGCCAGATTGAAGATTGCAACCATTGCCAGAAAAATTAAAACAAAGTTTCCAACATCCAGAAATTTACGAACAATTCAACACTTCTTTTCTGAACTTGTTCCTGTTCCGAAACTTTTTACTTGCATTCTGTGTTTTTGTAAGCTTTTTGGTACATACTTACTATTGTAAGTATCTTTATCATG
TTGAATTGATGTATGATTGTAATTGGGTGCATTATTGGTTGAACCCAACACCCTTTTGAGTTTAAATTTCTATTATTGAGTTGGATTATTGTAAAAGAGTGAAAGAAGACGTGCG