NA ----> NA

Intron 1 GTATGTACGA ... TGTTGTGTAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	55.62	219	311	238
A2	46.58	172	203	97
A3	49.63	172	200	139
A4	48.08	149	170	106
A5	43.93	127	115	84
A6	27.5	485	254	114
A7	36.77	907	755	300
A8	33.97	1044	790	284
A9	30.95	617	392	161
A10	33.3	654	441	212

>TRINITY_DN131414_c3_g2_i7 from sample A1 / Example spliced isoform

CAGAGTCTTTTTGAGTTTTTTTTTCTTTTCTTCTTAGATTAAGCATGGCCATGCTTTTATTTGTTTTTACTTGTCAATATGTTTGTGTTTTCTTCTGCTTTTTCATTTTTAATTGTTTAGTTTTAATGTGATTATGTTTTGTTTGTATCTTTTCGTTTATGATTTTTTGTCTTGTTTTGGATAGAAAAGATACTGCCACA
GAAAACTGAATATGAGAGCTCATGAGTGTAGGAGGAACGCTAGCAAGTGAATTTCAGCCACCGCCGAATTTGAAGATAGAATTCGCATAAACATCCACACATAGATTTTGGATTTGTTAAGTTAGGCTTAGATTTTGTTATAATTTATATTTTGGAATTGCGGTCG

>TRINITY_DN131414_c3_g2_i3 from sample A1 / Example unspliced isoform:

CAGAGTCTTTTTGAGTTTTTTTTTCTTTTCTTCTTAGATTAAGCATGGCCATGCTTTTATTTGTTTTTACTTGTCAATATGTTTGTGTTTTCTTCTGCTTTTTCATTTTTAATTGTTTAGTTTTAATGTGATTATGTTTTGTTTGTATCTTTTCGTTTATGATTTTTTGTCTTGTTTTGGATAGAAAAGATACTGCCACA
GAAAACTGAATATGAGAGCTCATGAGgtatgtacgattttaatttcttaacaacactgtgctttatccatggaatacattatagggttttgagtaatattttctgctttgttgtgtagTGTAGGAGGAACGCTAGCAAGTGAATTTCAGCCACCGCCGAATTTGAAGATAGAATTCGCATAAACATCCACACATAGATTT
TGGATTTGTTAAGTTAGGCTTAGATTTTGTTATAATTTATATTTTGGAATTGCGGTCG