NA ----> NA

Intron 1 GTGGATGAAG ... TTAGAAAAAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	23.08	10	4	2
A2	46.67	4	4	3
A3	40	12	13	3
A4	20	4	2	0
A5	33.33	1	1	0
A6	42.03	20	20	9
A7	46.84	42	46	28
A8	49.33	57	70	41
A9	47.11	32	37	20
A10	50	28	34	22

>TRINITY_DN46478_c2_g2_i3 from sample A8 / Example spliced isoform

GGTTTGTTTGGGATCTAGAGGGATGATGGAGGACTAAAATATCCAGAAGTGGGAATCACTGGGTGGTCAGCCGCAAAGGCGGGAAAGGAGTGCAGAGCGGAAATCACTGATGCAGCAGATTTTCGGGATTGCAGGTAGATGAAGAGTAAAGTAGTCATTGAAAGTTTTTTTTGCAGGAGATGAGAAGTAGTGATTGAAAG
CATTTTGCAGGAGACCAGATTAGCAATAAAAAATGTAATTACATTTTTGTAAATGTAAATATTGTTTTTTTAATATAAACATTTGAAAACTATATTATTAATAAAAATATTAATTTTTTTTTAGGGAAGGGGCAAGTCCCCTTTCCCAAATCCTTCAAGACAGCCAGCTTTGACTAGCTATCTTTAAGGAGTGTTTTTAT
GTGTATTTTTCTTGTCAATGTTTTTATTTCAGATTTTTTAG

>TRINITY_DN46478_c2_g2_i5 from sample A8 / Example unspliced isoform:

GGTTTGTTTGGGATCTAGAGGGATGATGGAGGACTAAAATATCCAGAAGTGGGAATCACTGGGTGGTCAGCCGCAAAGGCGGGAAAGGAGTGCAGAGCGGAAATCACTGATGCAGCAGATTTTCGGGATTGCAGgtggatgaagattgcaggactaatatttgaagaagtagaaggaaaactttttgaatgagattagaa
aaagGTAGATGAAGAGTAAAGTAGTCATTGAAAGTTTTTTTTGCAGGAGATGAGAAGTAGTGATTGAAAGCATTTTGCAGGAGACCAGATTAGCAATAAAAAATGTAATTACATTTTTGTAAATGTAAATATTGTTTTTTTAATATAAACATTTGAAAACTATATTATTAATAAAAATATTAATTTTTTTTTAGGGAAGG
GGCAAGTCCCCTTTCCCAAATCCTTCAAGACAGCCAGCTTTGACTAGCTATCTTTAAGGAGTGTTTTTATGTGTATTTTTCTTGTCAATGTTTTTATTTCAGATTTTTTAG