sp|Q9LIC2|TMN7_ARATH ----> Transmembrane 9 superfamily member 7
Intron 1 GTTGGGCTTC ... TGAATTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 19.24 | 747 | 44 | 178 |
| A2 | 15.22 | 774 | 38 | 139 |
| A3 | 13.56 | 835 | 42 | 131 |
| A4 | 17.02 | 697 | 35 | 143 |
| A5 | 15.28 | 316 | 9 | 57 |
| A6 | 16.05 | 1208 | 50 | 231 |
| A7 | 16.99 | 1524 | 77 | 312 |
| A8 | 16.67 | 730 | 47 | 146 |
| A9 | 15.62 | 1405 | 47 | 260 |
| A10 | 13.3 | 1271 | 71 | 195 |
>TRINITY_DN44051_c0_g2_i1 from sample A6 / Example spliced isoformTAGCGCTTCCCTTCCTGCCTTAGCCTTGAGCAGTGCTATTTGTTTAAATATCTTTTGTATAAAAGTCTTAGAAAAGGACACCAGGAAGGACGTGACGGGGATGAAATGCGTACATTAGTTAAATGGGCAAGAAGCTCACAACGAAAACGATGGGGTCTTTTGTGATCCATGGCGTACAATCCCATTCGTCTTAGGCTTAT
TATGTATGGGAAGAGAAACCCTGAATTCATTTAAACTGTTTCGAACATCGTTTCATCGGAAGTCATCGGTAAACGAGTCGTGGTTGCAGGATTCGATCTGGTGGATCCATAGATCCAATCAGATCTAAAAATGGCGCTCACTGGACTCATGCAGATCCTCGTATGGACCTCGGTGCTTCTTCTGCTCTTCTTCAAGGCCA
ACTGCTTTTATCTTCCAGGCGTCGCACCCCAAGATTTCAGTAAGGGGGATGTGCTACAAGTGAAAGTGAACAAGTTGACTTCCATAAAGACTCAGCTTCCTTATGATTACTATTCTCTGCAATACTGCCATCCGAGTAAGATTGTTGACACCTCTGAAAACCTTGGAGAAGTTCTTCGAGGTGATCGCATTGAAAACTCT
CCTTATGTGTTTGAAATGAGAGAAAGTAAGCTGTGCAATGTTGTTTGTAAGAGGAAGTTTGATGCAAAGGCAGCAAAGGACTTTAAGGAGAAGATTGATGATGAATATCTTGTCAATATGATTCTGGATAATTTACCTGTAGCAGTAGCCAGACAGAGGGCTGAAGGAAGTCCTACTACTTATGAGCATGGCTTCCGGGT
TGGGTTCAAAGCAAGCTACACAGGGAGTTCCGAAGAAGTATATTTCATCCACAATCATTTATCTTTTGATGTGATGTATCATAAGGATCTTGAAACTGATTCAGCACGCATAGTTGGATTTGAAGTTACACCATACAGTGTGAAGCATGAGTATGAACAGCCGTGGGATAAAGACAAACCCCATTTGACAACCTGTGATC
CAAATACCAAGCGCACAGTTTCAAATTCTGAGACTCCCCAAGAAGTTGTGGAAGACAAAGAAATCATATTCACTTATGATGTTACATTCCGGGATAGCCCTGTGAAATGGGCATCTCGTTGGGATACCTACCTTCTTATGACAGATGATCAGATCCATTGGTTCTCTATCATAAACTCATTGATGATTGTTTTGTTTCTT
TCTGGAATGGTTGCAATGATCATGATGCGAACATTGTACCGAGATATCTCAAAATACAACCAATTAGAAACACAGGATGAAGCTCAGGAGGAAACAGGATGGAAGTTAGTCCATGGAGATGTGTTCAGGGCTCCAACAAATGCAAGCTTACTCTGTGTCTATGTGGGAACTGGAGTACAATTTTTTGCGATGACACTAGT
GACAATGATATTTGCTATCCTTGGTTTCCTTTCTCCCTCGAACCGTGGAGGTTTGATGACAGCTATGCTGCTTTTATGGGTGTTTATGGGTTTGTTTGCGGGGTATGCCTCATCACGTCTATATAAGATGTTCAAGGGCACAGAATGGAGAAAGAACACGCTCAAGACAGCATTCTTGTTTCCAGGCATTGCGTTTTGCA
TTTTTTTCATTCTCAATGCACTGATATGGGGTGAGAAATCATCTGGTGCTGTTCCTTTTGGGACTATGTTTGCTTTGGTCCTTTTATGGTTTGGAATTTCTGTGCCATTGGTCTTTGTGGGCAGTTACTTTGGCTACAAGAAACCTGCAATTGAGGATCCAGTGAAAACCAATAAAATCCCCAGGCAGATTCCAGAACAA
GCTTGGTATATGCGGCCCATTTTCTCAATACTAATTGGAGGCATTTTGCCGTTTGGCGCTGTGTTCATTGAACTGTTCTTCATCTTAACTTCAATATGGCTGCATCAGTTCTACTATATCTTTGGGTTCCTGTTCATTGTCTTTGTGATCCTCATTGTTACATGTGCAGAGATCACTATTGTTCTGTGCTACTTCCAATT
GTGCAGTGAAGATTACAACTGGTGGTGGAGAGCTTATTTGACTGCAGGCTCCTCAGCATTTTACTTGTTTCTCTATGCTACATTCTATTTCTTCACCAAGTTGGAGATGACAAAGCTTGTTTCTGGAATTTTGTATTTTGGCTACATGACCATCATTTCATACTCATTTTTTGTTTTGACCGGTACAATAGGTTTCTATG
CCTGCCTCTGGTTTGTGCGGACAATATACTCATCAGTGAAGATTGACTGAGGTTCTGCATGCGGTGGCCATTTTTCAGAGGGGCCCTTTAAGTTATGCTTTAGGGGAATAGTGCTTGCTCATTTTATGTAGTTTAGAGTTTTTTGGGTAACATTACTGGAGACTTACCACTATCAATGTGCTGGTGTGGGAATTAACAGT
GAAGATGTATGCTGGTGTATGTTTCTTCTTAGATTTAATCTCCTGCTACATTTTCTTGTTGAAATATGGAAACTCAATTCCCATTGTAATCAATTCAATGCTATTTTTTATGCACTTGAGGCCAAAACCATTGAGATATTTATTGATTTTCAAGTTCCTTCAACAATTGGATAGAGTATGCATCATTCTGAGTAGGATAG
GATGTATTTTATCTAAACAGTTTTTATTTTCTAGTTTGGTGAATGCTAAGGTTTTGTTCAATAAACAGTTCCTGTTGTTGCGAAGGGTTTGTACAATAGACAGTTGTCATTGTTCACATTACTGTGGCTGGCATTAAGA
>TRINITY_DN44051_c0_g2_i3 from sample A6 / Example unspliced isoform:GGTTCAAAGCAAGCTACACAGGGGTAAGTGGTGAATATTATTCTCATGCAAGGGCCAAGGACAAACAGAAACCTATGTCTGAGATTGGTAACGGTAGTTTGATTTCCTGTCTTTGGAAATTAATGAATTAGTTTTCTCATGCAAGGAGCACATACGAGTATTTGCACCTTTGAATTTAGACATGAATCTGATTTGAAATC
TGTTTACTGTCTTGGTACAGAGTTCCGAAGAAGTATATTTCATCCACAATCATTTATCTTTTGATGTGATGTATCATAAGGATCTTGAAACTGATTCAGCACGCATAGTTGGATTTGAAGTTACACCATACAGgttgggcttcctagggaatgctatctacttgatattaaaactctaactattcctctttaaaatgcca
tggaaaagaaagctatcggtctgcttccttttacttcttcctctcctgcctctaaattatattgataattttcttttatccagctgcttacatttggaaataaaattggtaaggaaatgcatttgttacactcaactcatcttgaactgttaagagtttgaacatgcaattatgacttttgtcttatttcaattgaatag
cacaatgccacttgaaccgtgtctttaatggtgttacttttagtttttttttatctttatgaagttcaaaccctgaagattgtctttcttcttgattttattccgaagttaattctctttgaatgttgaattgcagTGTGAAGCATGAGTATGAACAGCCGTGGGATAAAGACAAACCCCATTTGACAACCTGTGATCCA
AATACCAAGCGCACAGTTTCAAATTCTGAGACTCCCCAAGAAGTTGTGGAAGACAAAGAAATCATATTCACTTATGATGTTACATTCCGGGATAGCCCTGTGAAATGGGCATCTCGTTGGGATACCTACCTTCTTATGACAGATGATCAGATCCATTGGTTCTCTATCATAAACTCATTGATGATTGTTTTGTTTCTTTC
TGGAATGGTTGCAATGATCATGATGCGAACATTGTACCGAGATATCTCAAAATACAACCAATTAGAAACACAGGATGAAGCTCAGGAGGAAACAGGATGGAAGTTAGTCCATGGAGATGTGTTCAGGGCTCCAACAAATGCAAGCTTACTCTGTGTCTATGTGGGAACTGGAGTACAATTTTTTGCGATGACACTAGTGA
CAATGATATTTGCTATCCTTGGTTTCCTTTCTCCCTCGAACCGTGGAGGTTTGATGACAGCTATGCTGCTTTTATGGGTGTTTATGGGTTTGTTTGCGGGGTATGCCTCATCACGTCTATATAAGATGTTCAAGGGCACAGAATGGAGAAAGAACACGCTCAAGACAGCATTCTTGTTTCCAGGCATTGCGTTTTGCATT
TTTTTCATTCTCAATGCACTGATATGGGGTGAGAAATCATCTGGTGCTGTTCCTTTTGGGACTATGTTTGCTTTGGTCCTTTTATGGTTTGGAATTTCTGTGCCATTGGTCTTTGTGGGCAGTTACTTTGGCTACAAGAAACCTGCAATTGAGGATCCAGTGAAAACCAATAAAATCCCCAGGCAGATTCCAGAACAAGC
TTGGTATATGCGGCCCATTTTCTCAATACTAATTGGAGGCATTTTGCCGTTTGGCGCTGTGTTCATTGAACTGTTCTTCATCTTAACTTCAATATGGCTGCATCAGTTCTACTATATCTTTGGGTTCCTGTTCATTGTCTTTGTGATCCTCATTGTTACATGTGCAGAGATCACTATTGTTCTGTGCTACTTCCAATTGT
GCAGTGAAGATTACAACTGGTGGTGGAGAGCTTATTTGACTGCAGGCTCCTCAGCATTTTACTTGTTTCTCTATGCTACATTCTATTTCTTCACCAAGTTGGAGATGACAAAGCTTGTTTCTGGAATTTTGTATTTTGGCTACATGACCATCATTTCATACTCATTTTTTGTTTTGACCGGTACAATAGGTTTCTATGCC
TGCCTCTGGTTTGTGCGGACAATATACTCATCAGTGAAGATTGACTGAGGTTCTGCATGCGGTGGCCATTTTTCAGAGGGGCCCTTTAAGTTATGCTTTAGGGGAATAGTGCTTGCTCATTTTATGTAGTTTAGAGTTTTTTGGGTAACATTACTGGAGACTTACCACTATCAATGTGCTGGTGTGGGAATTAACAGTGA
AGATGTATGCTGGTGTATGTTTCTTCTTAGATTTAATCTCCTGCTACATTTTCTTGTTGAAATATGGAAACTCAATTCCCATTGTAATCAATTCAATGCTATTTTTTATGCACTTGAGGCCAAAACCATTGAGATATTTATTGATTTTCAAGTTCCTTCAACAATTGGATAGAGTATGCATCATTCTGAGTAGGATAGGA
TGTATTTTATCTAAACAGTTTTTATTTTCTAGTTTGGTGAATGCTAAGGTTTTGTTCAATAAACAGTTCCTGTTGTTGCGAAGGGTTTGTACAATAGACAGTTGTCATTGTTCACATTACTGTGGCTGGCATTAAGA
Intron 2 GTAATATAAT ... ATCAGAGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 78.55 | 339.6 | 125 | 1109.6 |
| A2 | 77.61 | 316.4 | 130 | 970 |
| A3 | 76.99 | 399.6 | 155 | 1178.1 |
| A4 | 77.5 | 297.9 | 93 | 907.3 |
| A5 | 76.14 | 186.3 | 85 | 521.1 |
| A6 | 78.87 | 343.9 | 230 | 1147 |
| A7 | 78.03 | 730 | 362 | 2311.4 |
| A8 | 76.89 | 294.3 | 108 | 860.4 |
| A9 | 78.02 | 691.4 | 477 | 2184.1 |
| A10 | 78.11 | 710 | 453 | 2249.9 |
>TRINITY_DN107386_c0_g1_i6 from sample A4 / Example spliced isoformGGTGCTTGCTATACGGTTGGGTGGGGTGGGTTCCCGGTCACGAAAAAAAAATATATATACTTAGAATTTGACCTTAGAGAGACGTTGCTCACCAAAATTAGATATATAATAAATATTTGAGAAAGGTCCAGCACACCTATCACACAGCAGGTCGTGAATCACAAGTTAAAGAAATACAGGTGCCGGACGTGAAGGGACTA
TCAACCGGGTTTAAATTGCCACGAGACAGATCTCCATCAGCCAGAAGCAGTGATGGTGTCCATGGGGTTCCTGCAAGCCCTTTTATGGCCCTTGCTGCTTCTTCACCTTCTGCTGGCTTCCCCAGTAAATTCGTTTTATCTTCCAGGGGTCGCTCCTCAGGACTTTTCCAAGGGTGATGAGCTGCAAGTGAAAGCAAACA
AGTTAACCTCCACCAAGACACAACTGCCTTATGATTTCTATTATTTGGAATACTGCAAGCCAACTGAAATTGTCAACAGTGCTGAAAATCTGGGGGAAGTTCTTCGTGGTGACCGCATTGAAAACTCTCCATATGTTTTTCAAATGAGAGAAAACAAGCTGTGCAACTACGTTTGCACTAAGAAACTGGACTCAAAGTCT
GCAAAGAAGTTCAAGGATAAAATAGATGATGAATATCATGTGAACATGATACTGGATAATCTTCCTCTCGTTATAGCCAAGAAAAGGGCAGATGGAAGCCAAGCTACCTCCTATGAACATGGTTTCCGGGTGGGGTTCAAAGCTAGTTATGCAGGGAGTTCAGAAGAGAGATATTTTATCCACAATCATCTAGCTTTCAC
TGTAAAGTATCATAGGGACACTGAGACTGATACTGCACGCATTGTTGGTTTTGAAGTCGTACCTTTCAGTGTGAAGCATGAATATGAACAGCCTTGGGATCCTGAGAAGCCACAGTTAACAACCTGCAATGCAAATACAAAACGTTATGTTTCGGTTGTTGATGCTCCCCAGGAAGTGGAGGAAGGTAAAGAGGTCATCT
TCACGTATGATGTTAACTTCGAGGAAAGTCCTGTGAAATGGGCATCCCGATGGGATACATACCTTCTGATGACAGATGACCAGATACACTGGTTCTCTATCATTAATTCACTGATGATTGTTCTCTTCCTTTCTGGTATGGTGGCAATGATCATGATGAGAACTTTGTATAGGGATATCTCTAAATACAACCAGTTGGAG
ACACAAGATGAAGCCCAAGAAGAAACAGGATGGAAATTGGTCCATGGAGATGTGTTCAGGCCTCCTACTCATTCTAGCTTGCTGTGTGTGTATGTGGGAACTGGTGTTCAGTTTTTTGGAATGACACTTGTGACAATGATATTTGCTTTGCTTGGTTTCCTTTCTCCTTCCAACCGTGGTGGCTTGATGACAGCTATGGT
TCTACTGTGGGTGTTCATGGGTTTGTTCGCTGGCTACTCTTCTGCTCGGCTATATAAGATGTTCAAGGGTTCAGAATGGAAGAAAAACACACTAAAGACTGCTTTCATGTTTCCTGGAATTGTTTTCTGCATTTTCTTTGTATTGAATGCATTGATATGGGGCGAGAAATCATCTGGTGCTGTACCTTTTGGGACTATGT
TTGCTTTGGTCTTTTTATGGTTTGGAATTTCTGTACCCTTGGTTTTTGTTGGCAGCTATTTCGGCTACAAGAAACCTGCAATTGAAGATCCAGTGAAAACAAACAAAATTCCCAGGCAAATTCCAGAACAGGCTTGGTACATGCAACCCGTTTTCTCCGTACTCATTGGTGGCATATTGCCGTTTGGAGCTGTTTTCATT
GAGCTGTTTTTCATCCTGACTTCTATATGGCTGAATCAGTTCTACTACATCTTTGGGTTCTTGTTTATAGTCTTTGTTATCCTGCTCGTCACTTGTGCAGAGATCACCATTGTTCTCTGCTACTTCCAGCTATGCAGTGAAGACTATCACTGGTGGTGGAGAGCATATCTGACTTCAGGCTCTTCGGCACTCTACTTGTT
TCTATACGCAATATTTTACTTCTTCACGAAACTTGAGATTACTAAACTTGTTTCTGGCATTTTGTACTTCGGCTACATGACGATCATTTCTTATGCTTTCTTTGTATTGACGGGTACTATCGGCTTCTATGCATGCTTCTGGTTTGTCCGAAAAATTTACTCATCGGTGAAGATTGACTAAAGCTGCCTGGCATGTCTAG
TTTTTTCGCAAAATTACAAAGGGTTATATGGTTAATGGCAAGGAAGCAGAGAATAGCAGAGAATACTTACGTGTACAAGTTACTCGTTATTCGGAACTGCCAGGTCGCATGCAAAGAAAAGCCGACTTGTAGAAAAGTAAGAGCTATGTGGTGAATGCTACTTCTTGATGCCTTTATGATGAAGGCTACCAATTTGCTAA
AGCCACTATGGAAATTTCTGTTAGTTTGCTTTGTATTTAGAAAATTGTGTTAGTATTAACATTTATTTCTTTGATTCTCAGATTCAACATTATTTTGATCAAAAGTGATCCAGCTAGTGTTTTGTTTTTAGGAATGGCAGAAAATGCAAACACCGCAGCTTTTTGAGTCTGAATATTTGCATTTCTTTTCTTCACCGCAA
AGTAATTGGTTGTAATCGTTTCTTTGTAGTTTTGGGGTATTGGGTGGGTGATCCATTCTGTCAAAGTATTATGCAAAATACTCACATGATTGATTTGAGGCTTTGGATAGCCACATAACTTTAGGTGACTTACAATATTCTGCAAGTATCTGAGAAGGTATCTGAGAAGGCAACATGTTTTATGCCATTAGTTTGGAACC
ATATTAGTGGAGTTTTTGGTTATTTAATTCATTTCAGACAAGAATGTAGATTAAAAATCAGCTATTTGTAGTTTCCCCTCTAGGTTTGAATTTTGACATTCTTCTGGACAGTGTTGTCGTATATTAGTTACCATGGTGAGAATCTACTTTCCCATGGGGATAAACTGAGCAATTTCTGCAGATACAGGAATAAGTTGCCT
CGCAGGCCAACTGAGGGACAATCAAAAGGCTATGTGAGAGAAACAATGTTCAGTTAAGCCA
>TRINITY_DN107386_c0_g1_i2 from sample A4 / Example unspliced isoform:TTAAATCAATGCAAAATGAAGCAAAACCTTTAAAAACAAAATTTCAACGTACATAGAACTTGGATCACGATAAACGAAATTGGATGTCCTTTTTTTTCATAGTAGAATCGTTGGCGTGTGCCTGGAGGCGAAGGCACCGTGAGATCACGAAACGTGGGATTCGATCCGAGGTGGGGACGACCACAACCGGCCGCTCCAGC
CACCCCACCTACAGCAGGACCTCAACGAAATCGAATGCCTACATATAAACTATAATCTAATCGGTACACGTTTTACTTACCCTTTAAAAATATATATACTTAAAATTTATGCTTGCTATACGGTGGGGGTGACTATCCGGTCAACTGTGCTTGCTATACGGTGGTGCTTGCTATACGGTTGGGTGGGGTGGGTTCCCGGT
CACGAAAAAAAAATATATATACTTAGAATTTGACCTTAGAGAGACGTTGCTCACCAAAATTAGATATATAATAAATATTTGAGAAAGGTCCAGCACACCTATCACACAGCAGGTCGTGAATCACAAGTTAAAGAAATACAGGTGCCGGACGTGAAGGGACTATCAACCGGGTTTAAATTGCCACGgtaatataattttcc
tcgagtacatggcttctacttcttatgttgcagcgtaaaccctttgattctcaataccaaagcatatcagagcagAGACAGATCTCCATCAGCCAGAAGCAGTGATGGTGTCCATGGGGTTCCTGCAAGCCCTTTTATGGCCCTTGCTGCTTCTTCACCTTCTGCTGGCTTCCCCAGTAAATTCGTTTTATCTTCCAGGG
GTCGCTCCTCAGGACTTTTCCAAGGGTGATGAGCTGCAAGTGAAAGCAAACAAGTTAACCTCCACCAAGACACAACTGCCTTATGATTTCTATTATTTGGAATACTGCAAGCCAACTGAAATTGTCAACAGTGCTGAAAATCTGGGGGAAGTTCTTCGTGGTGACCGCATTGAAAACTCTCCATATGTTGTGAGTATTTT
TATGGGCTACATTTGTTTTTCTTTTCCTTTCAATTTGGCACTTGTTCGTCTTGTCATATTTTTGTATGGTTCAAAATCGTTATTTGCATGTGTCAGTTTCAAATGAGAGAAAACAAGCTGTGCAACTACGTTTGCACTAAGAAACTGGACTCAAAGTCTGCAAAGAAGTTCAAGGATAAAATAGATGATGAATATCATGT
GAACATGATACTGGATAATCTTCCTCTCGTTATAGCCAAGAAAAGGGCAGATGGAAGCCAAGCTACCTCCTATGAACATGGTTTCCGGGTGGGGTTCAAAGCTAGTTATGCAGGGAGTTCAGAAGAGAGATATTTTATCCACAATCATCTAGCTTTCACTGTAAAGTATCATAGGGACACTGAGACTGATACTGCACGCA
TTGTTGGTTTTGAAGTCGTACCTTTCAGTGTGAAGCATGAATATGAACAGCCTTGGGATCCTGAGAAGCCACAGTTAACAACCTGCAATGCAAATACAAAACGTTATGTTTCGGTTGTTGATGCTCCCCAGGAAGTGGAGGAAGGTAAAGAGGTCATCTTCACGTATGATGTTAACTTCGAGGAAAGTCCTGTGAAATGG
GCATCCCGATGGGATACATACCTTCTGATGACAGATGACCAGATACACTGGTTCTCTATCATTAATTCACTGATGATTGTTCTCTTCCTTTCTGGTATGGTGGCAATGATCATGATGAGAACTTTGTATAGGGATATCTCTAAATACAACCAGTTGGAGACACAAGATGAAGCCCAAGAAGAAACAGGATGGAAATTGGT
CCATGGAGATGTGTTCAGGCCTCCTACTCATTCTAGCTTGCTGTGTGTGTATGTGGGAACTGGTGTTCAGTTTTTTGGAATGACACTTGTGACAATGATATTTGCTTTGCTTGGTTTCCTTTCTCCTTCCAACCGTGGTGGCTTGATGACAGCTATGGTTCTACTGTGGGTGTTCATGGGTTTGTTCGCTGGCTACTCTT
CTGCTCGGCTATATAAGATGTTCAAGGGTTCAGAATGGAAGAAAAACACACTAAAGACTGCTTTCATGTTTCCTGGAATTGTTTTCTGCATTTTCTTTGTATTGAATGCATTGATATGGGGCGAGAAATCATCTGGTGCTGTACCTTTTGGGACTATGTTTGCTTTGGTCTTTTTATGGTTTGGAATTTCTGTACCCTTG
GTTTTTGTTGGCAGCTATTTCGGCTACAAGAAACCTGCAATTGAAGATCCAGTGAAAACAAACAAAATTCCCAGGCAAATTCCAGAACAGGCTTGGTACATGCAACCCGTTTTCTCCGTACTCATTGGTGGCATATTGCCGTTTGGAGCTGTTTTCATTGAGCTGTTTTTCATCCTGACTTCTATATGGCTGAATCAGTT
CTACTACATCTTTGGGTTCTTGTTTATAGTCTTTGTTATCCTGCTCGTCACTTGTGCAGAGATCACCATTGTTCTCTGCTACTTCCAGCTATGCAGTGAAGACTATCACTGGTGGTGGAGAGCATATCTGACTTCAGGCTCTTCGGCACTCTACTTGTTTCTATACGCAATATTTTACTTCTTCACGAAACTTGAGATTA
CTAAACTTGTTTCTGGCATTTTGTACTTCGGCTACATGACGATCATTTCTTATGCTTTCTTTGTATTGACGGGTACTATCGGCTTCTATGCATGCTTCTGGTTTGTCCGAAAAATTTACTCATCGGTGAAGATTGACTAAAGCTGCCTGGCATGTCTAGTTTTTTCGCAAAATTACAAAGGGTTATATGGTTAATGGCAA
GGAAGCAGAGAATAGCAGAGAATACTTACGTGTACAAGTTACTCGTTATTCGGAACTGCCAGGTCGCATGCAAAGAAAAGCCGACTTGTAGAAAAGTAAGAGCTATGTGGTGAATGCTACTTCTTGATGCCTTTATGATGAAGGCTACCAATTTGCTAAAGCCACTATGGAAATTTCTGTTAGTTTGCTTTGTATTTAGA
AAATTGTGTTAGTATTAACATTTATTTCTTTGATTCTCAGATTCAACATTATTTTGATCAAAAGTGATCCAGCTAGTGTTTTGTTTTTAGGAATGGCAGAAAATGCAAACACCGCAGCTTTTTGAGTCTGAATATTTGCATTTCTTTTCTTCACCGCAAAGTAATTGGTTGTAATCGTTTCTTTGTAGTTTTGGGGTATT
GGGTGGGTGATCCATTCTGTCAAAGTATTATGCAAAATACTCACATGATTGATTTGAGGCTTTGGATAGCCACATAACTTTAGGTGACTTACAATATTCTGCAAGTATCTGAGAAGGTATCTGAGAAGGCAACATGTTTTATGCCATTAGTTTGGAACCATATTAGTGGAGTTTTTGGTTATTTAATTCATTTCAGACAA
GAATGTAGATTAAAAATCAGCTATTTGTAGTTTCCCCTCTAGGTTTGAATTTTGACATTCTTCTGGACAGTGTTGTCGTATATTAGTTACCATGGTGAGAATCTACTTTCCCATGGGGATAAACTGAGCAATTTCTGCAGATACAGGAATAAGTTGCCTCGCAGGCCAACTGAGGGACAATCAAAAGGCTATGTGAGAGA
AACAATGTTCAGTTAAGCCA
Intron 3 GTTACTATTA ... GTATCACAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 21.57 | 20 | 5 | 6 |
| A2 | 44.93 | 19 | 5 | 26 |
| A3 | 20 | 30 | 10 | 5 |
| A4 | 28 | 18 | 6 | 8 |
| A5 | 27.59 | 21 | 13 | 3 |
| A6 | 22.04 | 156.5 | 40.5 | 48 |
| A7 | 25.35 | 81 | 28 | 27 |
| A8 | 28.59 | 103 | 50.5 | 32 |
| A9 | 25.69 | 107 | 39 | 35 |
| A10 | 26.03 | 54 | 19 | 19 |
>TRINITY_DN41856_c0_g2_i3 from sample A8 / Example spliced isoformCACGTTCTTTACCAAGGTGGGTTTTGTTCGAATTCGAACTTGTAATCACGATCACAAGTCCATTGCTCGTTAATCTGACCGTATGAAGGCTTCATCGAAGCCGACTTCATTTGCGCAGAAGAGAACCGATGATAGATCGCCCGACTGTGTTTAATTACCTCAGCAAGACTGTAATTTTGTGGTTTCCCTAGAATTTCAGA
AATTCCATGAAAACCCCCGTCATTCCCAAGCGAGGTAAACTTGGGGTTTTATTCAATGGAGGCGTTCAAAATCTATAGGAATCTCTTGAGGGCAGTGCAGACACACATTGATAATGCCAATAAAACACACTTCCGAGAATATATCATGGCGGAGTTCAGAAAGAATAAAGATCCTGAGGACTCTGCCTTTGTTCAACAGA
AGCTGCAGCTTGCACATAATTATGCTCTACAGCTTAGTAGTATTCACCATCATAAGGATCTCCTATTATCTTACAATATTGCCATAGATCGGGAAGCAGAAAAGAAGTTGACACTGGAAAGATCAGCTGCAAGTGTTGGACTTAAACTTCCAAAACCTTATGATGATTAATATCACAAAGCCTCATGTAGATGCATGCTC
ATAAAACTTTGATCTACAGGGAGATGAGCTTTGAATGGTGGATGGAATTCATGGATACCTTTTAAATATGCTGACATGAAACAATTAATGCAGAATAGAGATATGGTTGCTTTGAAACCATATCAAATGTGCATATATGTTTAGATTGTTCTCTTGCACTGTAATCCACATGCTGTAGCCATGACAAGCTTGTCTATGTC
CTTTTATTTACTAGTTTGTTTAGAGGAAAGAACCCATCAATTTTTATGGACCAAAGGTCACAGACATTATATTCTACATCACCAAATAATGAAAATCACACATCTCATCCATCTGTTATTCCTTATTCCCAACTTATAGATGAGTCTTCTTACATCCTCCCCACTCAACTATTTTACACTAAAGTTTCTGCTACTTTCAA
ACCTCATTAATGCCTTCCCAAAAGGGGCTAGCTTGCAGGCTATACACTGTCAGGTGTGAATTTGTTGAATCACTTGAAGCTATTGTTTGAATTCAATTTTCATTTTCAGTCCAATGAAAATAAGGAAACTGCAAATTTCATTGAGTAGATTATTGCAGAAGGCTTCCTCTTCAACCTAAACCGTATGACCTCGTCCTTAC
ACCAAAGTGTCGTATTTTTTTATCTGTTTTTTGAATTTTCTGAAGATAAATATTGAAGTACTAGTAAACATTTC
>TRINITY_DN41856_c0_g2_i9 from sample A8 / Example unspliced isoform:CACGTTCTTTACCAAGGTGGGTTTTGTTCGAATTCGAACTTGTAATCACGATCACAAGTCCATTGCTCGTTAATCTGACCGTATGAAGGCTTCATCGAAGCCGACTTCATTTGCGCAGAAGAGAACCGATGATAGATCGCCCGACTGTGTTTAATTACCTCAGCAAGACTGTAATTTTGTGGTTTCCCTAGAATTTCAGA
AATTCCATGAAAACCCCCGTCATTCCCAAGCGAGgttactattatgtgtagttacaactttgggtggtttctcaaaatgtgaaaatagaaacttagtcgaaactagttcctaaaattgtgaagctatagacattcccgaggaaaaggtcaaatactgagtggagcttgttacactgagaatttaaatacttgctatacac
aatgactagaatatggagaagttgaaacaggacaagctgctagcaaccaaagattgcaggattctacaaggtatcacaagGTAAACTTGGGGTTTTATTCAATGGAGGCGTTCAAAATCTATAGGAATCTCTTGAGGGCAGTGCAGACACACATTGATAATGCCAATAAAACACACTTCCGAGAATATATCATGGCGGAG
TTCAGAAAGAATAAAGATCCTGAGGACTCTGCCTTTGTTCAACAGAAGCTGCAGCTTGCACATAATTATGCTCTACAGCTTAGTAGTATTCACCATCATAAGGATCTCCTATTATCTTACAATATTGCCATAGATCGGGAAGCAGAAAAGAAGTTGACACTGGAAAGATCAGCTGCAAGTGTTGGACTTAAACTTCCAAA
ACCTTATGATGATTAATATCACAAAGCCTCATGTAGATGCATGCTCATAAAACTTTGATCTACAGGGAGATGAGCTTTGAATGGTGGATGGAATTCATGGATACCTTTTAAATATGCTGACATGAAACAATTAATGCAGAATAGAGATATGGTTGCTTTGAAACCATATCAAATGTGCATATATGTTTAGATTGTTCTCT
TGCACTGTAATCCACATGCTGTAGCCATGACAAGCTTGTCTATGTCCTTTTATTTACTAGTTTGTTTAGAGGAAAGAACCCATCAATTTTTATGGACCAAAGGTCACAGACATTATATTCTACATCACCAAATAATGAAAATCACACATCTCATCCATCTGTTATTCCTTATTCCCAACTTATAGATGAGTCTTCTTACA
TCCTCCCCACTCAACTATTTTACACTAAAGTTTCTGCTACTTTCAAACCTCATTAATGCCTTCCCAAAAGGGGCTAGCTTGCAGGCTATACACTGTCAGGTGTGAATTTGTTGAATCACTTGAAGCTATTGTTTGAATTCAATTTTCATTTTCAGTCCAATGAAAATAAGGAAACTGCAAATTTCATTGAGTAGATTATT
GCAGAAGGCTTCCTCTTCAACCTAAACCGTATGACCTCGTCCTTACACCAAAGTGTCGTATTTTTTTATCTGTTTTTTGAATTTTCTGAAGATAAATATTGAAGTACTAGTAAACATTTC
Intron 4 GTATTGCCCA ... TATCTTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 24.16 | 1568 | 520 | 479 |
| A2 | 23.64 | 1138 | 343.5 | 361 |
| A3 | 23.91 | 1214 | 385 | 378 |
| A4 | 24.48 | 1244 | 409.5 | 397 |
| A5 | 22.84 | 581 | 186 | 158 |
| A6 | 24.69 | 1783 | 554 | 615 |
| A7 | 23.99 | 3006 | 882.5 | 1015 |
| A8 | 24.25 | 1721 | 499 | 603 |
| A9 | 24.01 | 2690 | 796 | 904 |
| A10 | 24.34 | 2555 | 809.5 | 834 |
>TRINITY_DN107386_c0_g1_i6 from sample A4 / Example spliced isoformGGTGCTTGCTATACGGTTGGGTGGGGTGGGTTCCCGGTCACGAAAAAAAAATATATATACTTAGAATTTGACCTTAGAGAGACGTTGCTCACCAAAATTAGATATATAATAAATATTTGAGAAAGGTCCAGCACACCTATCACACAGCAGGTCGTGAATCACAAGTTAAAGAAATACAGGTGCCGGACGTGAAGGGACTA
TCAACCGGGTTTAAATTGCCACGAGACAGATCTCCATCAGCCAGAAGCAGTGATGGTGTCCATGGGGTTCCTGCAAGCCCTTTTATGGCCCTTGCTGCTTCTTCACCTTCTGCTGGCTTCCCCAGTAAATTCGTTTTATCTTCCAGGGGTCGCTCCTCAGGACTTTTCCAAGGGTGATGAGCTGCAAGTGAAAGCAAACA
AGTTAACCTCCACCAAGACACAACTGCCTTATGATTTCTATTATTTGGAATACTGCAAGCCAACTGAAATTGTCAACAGTGCTGAAAATCTGGGGGAAGTTCTTCGTGGTGACCGCATTGAAAACTCTCCATATGTTTTTCAAATGAGAGAAAACAAGCTGTGCAACTACGTTTGCACTAAGAAACTGGACTCAAAGTCT
GCAAAGAAGTTCAAGGATAAAATAGATGATGAATATCATGTGAACATGATACTGGATAATCTTCCTCTCGTTATAGCCAAGAAAAGGGCAGATGGAAGCCAAGCTACCTCCTATGAACATGGTTTCCGGGTGGGGTTCAAAGCTAGTTATGCAGGGAGTTCAGAAGAGAGATATTTTATCCACAATCATCTAGCTTTCAC
TGTAAAGTATCATAGGGACACTGAGACTGATACTGCACGCATTGTTGGTTTTGAAGTCGTACCTTTCAGTGTGAAGCATGAATATGAACAGCCTTGGGATCCTGAGAAGCCACAGTTAACAACCTGCAATGCAAATACAAAACGTTATGTTTCGGTTGTTGATGCTCCCCAGGAAGTGGAGGAAGGTAAAGAGGTCATCT
TCACGTATGATGTTAACTTCGAGGAAAGTCCTGTGAAATGGGCATCCCGATGGGATACATACCTTCTGATGACAGATGACCAGATACACTGGTTCTCTATCATTAATTCACTGATGATTGTTCTCTTCCTTTCTGGTATGGTGGCAATGATCATGATGAGAACTTTGTATAGGGATATCTCTAAATACAACCAGTTGGAG
ACACAAGATGAAGCCCAAGAAGAAACAGGATGGAAATTGGTCCATGGAGATGTGTTCAGGCCTCCTACTCATTCTAGCTTGCTGTGTGTGTATGTGGGAACTGGTGTTCAGTTTTTTGGAATGACACTTGTGACAATGATATTTGCTTTGCTTGGTTTCCTTTCTCCTTCCAACCGTGGTGGCTTGATGACAGCTATGGT
TCTACTGTGGGTGTTCATGGGTTTGTTCGCTGGCTACTCTTCTGCTCGGCTATATAAGATGTTCAAGGGTTCAGAATGGAAGAAAAACACACTAAAGACTGCTTTCATGTTTCCTGGAATTGTTTTCTGCATTTTCTTTGTATTGAATGCATTGATATGGGGCGAGAAATCATCTGGTGCTGTACCTTTTGGGACTATGT
TTGCTTTGGTCTTTTTATGGTTTGGAATTTCTGTACCCTTGGTTTTTGTTGGCAGCTATTTCGGCTACAAGAAACCTGCAATTGAAGATCCAGTGAAAACAAACAAAATTCCCAGGCAAATTCCAGAACAGGCTTGGTACATGCAACCCGTTTTCTCCGTACTCATTGGTGGCATATTGCCGTTTGGAGCTGTTTTCATT
GAGCTGTTTTTCATCCTGACTTCTATATGGCTGAATCAGTTCTACTACATCTTTGGGTTCTTGTTTATAGTCTTTGTTATCCTGCTCGTCACTTGTGCAGAGATCACCATTGTTCTCTGCTACTTCCAGCTATGCAGTGAAGACTATCACTGGTGGTGGAGAGCATATCTGACTTCAGGCTCTTCGGCACTCTACTTGTT
TCTATACGCAATATTTTACTTCTTCACGAAACTTGAGATTACTAAACTTGTTTCTGGCATTTTGTACTTCGGCTACATGACGATCATTTCTTATGCTTTCTTTGTATTGACGGGTACTATCGGCTTCTATGCATGCTTCTGGTTTGTCCGAAAAATTTACTCATCGGTGAAGATTGACTAAAGCTGCCTGGCATGTCTAG
TTTTTTCGCAAAATTACAAAGGGTTATATGGTTAATGGCAAGGAAGCAGAGAATAGCAGAGAATACTTACGTGTACAAGTTACTCGTTATTCGGAACTGCCAGGTCGCATGCAAAGAAAAGCCGACTTGTAGAAAAGTAAGAGCTATGTGGTGAATGCTACTTCTTGATGCCTTTATGATGAAGGCTACCAATTTGCTAA
AGCCACTATGGAAATTTCTGTTAGTTTGCTTTGTATTTAGAAAATTGTGTTAGTATTAACATTTATTTCTTTGATTCTCAGATTCAACATTATTTTGATCAAAAGTGATCCAGCTAGTGTTTTGTTTTTAGGAATGGCAGAAAATGCAAACACCGCAGCTTTTTGAGTCTGAATATTTGCATTTCTTTTCTTCACCGCAA
AGTAATTGGTTGTAATCGTTTCTTTGTAGTTTTGGGGTATTGGGTGGGTGATCCATTCTGTCAAAGTATTATGCAAAATACTCACATGATTGATTTGAGGCTTTGGATAGCCACATAACTTTAGGTGACTTACAATATTCTGCAAGTATCTGAGAAGGTATCTGAGAAGGCAACATGTTTTATGCCATTAGTTTGGAACC
ATATTAGTGGAGTTTTTGGTTATTTAATTCATTTCAGACAAGAATGTAGATTAAAAATCAGCTATTTGTAGTTTCCCCTCTAGGTTTGAATTTTGACATTCTTCTGGACAGTGTTGTCGTATATTAGTTACCATGGTGAGAATCTACTTTCCCATGGGGATAAACTGAGCAATTTCTGCAGATACAGGAATAAGTTGCCT
CGCAGGCCAACTGAGGGACAATCAAAAGGCTATGTGAGAGAAACAATGTTCAGTTAAGCCA
>TRINITY_DN107386_c0_g1_i9 from sample A4 / Example unspliced isoform:TTAAATCAATGCAAAATGAAGCAAAACCTTTAAAAACAAAATTTCAACGTACATAGAACTTGGATCACGATAAACGAAATTGGATGTCCTTTTTTTTCATAGTAGAATCGTTGGCGTGTGCCTGGAGGCGAAGGCACCGTGAGATCACGAAACGTGGGATTCGATCCGAGGTGGGGACGACCACAACCGGCCGCTCCAGC
CACCCCACCTACAGCAGGACCTCAACGAAATCGAATGCCTACATATAAACTATAATCTAATCGGTACACGTTTTACTTACCCTTTAAAAATATATATACTTAAAATTTATGCTTGCTATACGGTGGGGGTGACTATCCGGTCAACTGTGCTTGCTATACGGTGGTGCTTGCTATACGGTTGGGTGGGGTGGGTTCCCGGT
CACGAAAAAAAAATATATATACTTAGAATTTGACCTTAGAGAGACGTTGCTCACCAAAATTAGATATATAATAAATATTTGAGAAAGGTCCAGCACACCTATCACACAGCAGGTCGTGAATCACAAGTTAAAGAAATACAGGTGCCGGACGTGAAGGGACTATCAACCGGGTTTAAATTGCCACGGTAATATAATTTTCC
TCGAGTACATGGCTTCTACTTCTTATGTTGCAGCGTAAACCCTTTGATTCTCAATACCAAAGCATATCAGAGCAGAGACAGATCTCCATCAGCCAGAAGCAGTGATGGTGTCCATGGGGTTCCTGCAAGCCCTTTTATGGCCCTTGCTGCTTCTTCACCTTCTGCTGGCTTCCCCAGTAAATTCGTTTTATCTTCCAGGG
GTCGCTCCTCAGGACTTTTCCAAGGGTGATGAGCTGCAAGTGAAAGCAAACAAGTTAACCTCCACCAAGACACAACTGCCTTATGATTTCTATTATTTGGAATACTGCAAGCCAACTGAAATTGTCAACAGTGCTGAAAATCTGGGGGAAGTTCTTCGTGGTGACCGCATTGAAAACTCTCCATATGTTTTTCAAATGAG
AGAAAACAAGCTGTGCAACTACGTTTGCACTAAGAAACTGGACTCAAAGTCTGCAAAGAAGTTCAAGGATAAAATAGATGATGAATATCATGTGAACATGATACTGGATAATCTTCCTCTCGTTATAGCCAAGAAAAGGGCAGATGGAAGCCAAGCTACCTCCTATGAACATGGTTTCCGGGTGGGGTTCAAAGCTAGTT
ATGCAGGGAGTTCAGAAGAGAGATATTTTATCCACAATCATCTAGCTTTCACTGTAAAGTATCATAGGGACACTGAGACTGATACTGCACGCATTGTTGGTTTTGAAGTCGTACCTTTCAGTGTGAAGCATGAATATGAACAGCCTTGGGATCCTGAGAAGCCACAGTTAACAACCTGCAATGCAAATACAAAACGTTAT
GTTTCGGTTGTTGATGCTCCCCAGGAAGTGGAGGAAGGTAAAGAGGTCATCTTCACGTATGATGTTAACTTCGAGgtattgcccaaatgttttgtaatggtttaattgatatttctgtttttgttctactgtagagaaatgcttgtaggtttttttccaatgaacatcgtgcttgcatatttatagtcagctaatatggt
ggtatcttgcagGAAAGTCCTGTGAAATGGGCATCCCGATGGGATACATACCTTCTGATGACAGATGACCAGATACACTGGTTCTCTATCATTAATTCACTGATGATTGTTCTCTTCCTTTCTGGTATGGTGGCAATGATCATGATGAGAACTTTGTATAGGGATATCTCTAAATACAACCAGTTGGAGACACAAGATGA
AGCCCAAGAAGAAACAGGATGGAAATTGGTCCATGGAGATGTGTTCAGGCCTCCTACTCATTCTAGCTTGCTGTGTGTGTATGTGGGAACTGGTGTTCAGTTTTTTGGAATGACACTTGTGACAATGATATTTGCTTTGCTTGGTTTCCTTTCTCCTTCCAACCGTGGTGGCTTGATGACAGCTATGGTTCTACTGTGGG
TGTTCATGGGTTTGTTCGCTGGCTACTCTTCTGCTCGGCTATATAAGATGTTCAAGGGTTCAGAATGGAAGAAAAACACACTAAAGACTGCTTTCATGTTTCCTGGAATTGTTTTCTGCATTTTCTTTGTATTGAATGCATTGATATGGGGCGAGAAATCATCTGGTGCTGTACCTTTTGGGACTATGTTTGCTTTGGTC
TTTTTATGGTTTGGAATTTCTGTACCCTTGGTTTTTGTTGGCAGCTATTTCGGCTACAAGAAACCTGCAATTGAAGATCCAGTGAAAACAAACAAAATTCCCAGGCAAATTCCAGAACAGGCTTGGTACATGCAACCCGTTTTCTCCGTACTCATTGGTGGCATATTGCCGTTTGGAGCTGTTTTCATTGAGCTGTTTTT
CATCCTGACTTCTATATGGCTGAATCAGTTCTACTACATCTTTGGGTTCTTGTTTATAGTCTTTGTTATCCTGCTCGTCACTTGTGCAGAGATCACCATTGTTCTCTGCTACTTCCAGCTATGCAGTGAAGACTATCACTGGTGGTGGAGAGCATATCTGACTTCAGGCTCTTCGGCACTCTACTTGTTTCTATACGCAA
TATTTTACTTCTTCACGAAACTTGAGATTACTAAACTTGTTTCTGGCATTTTGTACTTCGGCTACATGACGATCATTTCTTATGCTTTCTTTGTATTGACGGGTACTATCGGCTTCTATGCATGCTTCTGGTTTGTCCGAAAAATTTACTCATCGGTGAAGATTGACTAAAGCTGCCTGGCATGTCTAGTTTTTTCGCAA
AATTACAAAGGGTTATATGGTTAATGGCAAGGAAGCAGAGAATAGCAGAGAATACTTACGTGTACAAGTTACTCGTTATTCGGAACTGCCAGGTCGCATGCAAAGAAAAGCCGACTTGTAGAAAAGTAAGAGCCATGTGGTGAATACTACTTCTTGATGTCTTTATGATGAAGGCTACCAATTTGCTAAAGCCACTATGG
AAATTTCTGTTAGTTTGCTTTGTATTTAGAAAATTGTGTTAGTATTAACATTTATTTCTTTGATTCTCAGATTCAACATTATTTTGATCAAAAGTGATCCAGCTAGTGTTTTGTTTTTAGGAATGGCAGAAAATGCAAACACCGCAGCTTTTTGAGTCTGAATATTTGCATTTCTTTTCTTCACCGCAAAGTAATTGGTT
GTAATCGTTTCTTTGTAGTTTTGGGGTATTGGGTGGGTGATCCATTCTGTCAAAGTATTATGCAAAATACTCACATGATTGATTTGAGGCTTTGGATAGCCACATAACTTTAGGTGACTTACAATATTCTGCAAGTATCTGAGAAGGTATCTGAGAAGGCAACATGTTTTATGCCATTAGTTTGGAACCATATTAGTGGA
GTTTTTGGTTATTTAATTCATTTCAGACAAGAATGTAGATTAAAAATCAGCTATTTGTAGTTTCCCCTCTAGGTTTGAATTTTGACATTCTTCTGGACAGTGTTGTCGTATATTAGTTACCATGGTGAGAATCTACTTTCCCATGGGGATAAACTGAGCAATTTCTGCAGATACAGGAATAAGTTGCCTCGCAGGCCAAC
TGAGGGACAATCAAAAGGCTATGTGAGAGAAACAATGTTCAGTTAAGCCA
Intron 5 GTACGTATCC ... CGCACCACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 70.97 | 9 | 0 | 22 |
| A2 | 66.67 | 14 | 0 | 28 |
| A3 | 64.44 | 16 | 1 | 29 |
| A4 | 57.69 | 11 | 0 | 15 |
| A5 | 68.57 | 11 | 0 | 24 |
| A6 | 68.66 | 68 | 5 | 149 |
| A7 | 59.8 | 41 | 3 | 61 |
| A8 | 63.3 | 46 | 7 | 79.3 |
| A9 | 62.46 | 41.7 | 2 | 69.3 |
| A10 | 71.43 | 26 | 2 | 65 |
>TRINITY_DN41856_c0_g2_i3 from sample A8 / Example spliced isoformCACGTTCTTTACCAAGGTGGGTTTTGTTCGAATTCGAACTTGTAATCACGATCACAAGTCCATTGCTCGTTAATCTGACCGTATGAAGGCTTCATCGAAGCCGACTTCATTTGCGCAGAAGAGAACCGATGATAGATCGCCCGACTGTGTTTAATTACCTCAGCAAGACTGTAATTTTGTGGTTTCCCTAGAATTTCAGA
AATTCCATGAAAACCCCCGTCATTCCCAAGCGAGGTAAACTTGGGGTTTTATTCAATGGAGGCGTTCAAAATCTATAGGAATCTCTTGAGGGCAGTGCAGACACACATTGATAATGCCAATAAAACACACTTCCGAGAATATATCATGGCGGAGTTCAGAAAGAATAAAGATCCTGAGGACTCTGCCTTTGTTCAACAGA
AGCTGCAGCTTGCACATAATTATGCTCTACAGCTTAGTAGTATTCACCATCATAAGGATCTCCTATTATCTTACAATATTGCCATAGATCGGGAAGCAGAAAAGAAGTTGACACTGGAAAGATCAGCTGCAAGTGTTGGACTTAAACTTCCAAAACCTTATGATGATTAATATCACAAAGCCTCATGTAGATGCATGCTC
ATAAAACTTTGATCTACAGGGAGATGAGCTTTGAATGGTGGATGGAATTCATGGATACCTTTTAAATATGCTGACATGAAACAATTAATGCAGAATAGAGATATGGTTGCTTTGAAACCATATCAAATGTGCATATATGTTTAGATTGTTCTCTTGCACTGTAATCCACATGCTGTAGCCATGACAAGCTTGTCTATGTC
CTTTTATTTACTAGTTTGTTTAGAGGAAAGAACCCATCAATTTTTATGGACCAAAGGTCACAGACATTATATTCTACATCACCAAATAATGAAAATCACACATCTCATCCATCTGTTATTCCTTATTCCCAACTTATAGATGAGTCTTCTTACATCCTCCCCACTCAACTATTTTACACTAAAGTTTCTGCTACTTTCAA
ACCTCATTAATGCCTTCCCAAAAGGGGCTAGCTTGCAGGCTATACACTGTCAGGTGTGAATTTGTTGAATCACTTGAAGCTATTGTTTGAATTCAATTTTCATTTTCAGTCCAATGAAAATAAGGAAACTGCAAATTTCATTGAGTAGATTATTGCAGAAGGCTTCCTCTTCAACCTAAACCGTATGACCTCGTCCTTAC
ACCAAAGTGTCGTATTTTTTTATCTGTTTTTTGAATTTTCTGAAGATAAATATTGAAGTACTAGTAAACATTTC
>TRINITY_DN41856_c0_g2_i12 from sample A8 / Example unspliced isoform:CACGTTCTTTACCAAGGTGGGTTTTGTTCGAATTCGAACTTGTAATCACGATCACAAGTCCATTGCTCGTTAATCTGACCGTATGAAGGCTTCATCGAAGCCGACTTCATTTGCgtacgtatcccatttctcattgagttcatcccagctatttttaactcggggttcgtgcagattcaccttaataatgattgcagaga
taaatttcatagccgcttagaattttattttcgcaccacagGCAGAAGAGAACCGATGATAGATCGCCCGACTGTGTTTAATTACCTCAGCAAGACTGTAATTTTGTGGTTTCCCTAGAATTTCAGAAATTCCATGAAAACCCCCGTCATTCCCAAGCGAGGTAAACTTGGGGTTTTATTCAATGGAGGCGTTCAAAATC
TATAGGAATCTCTTGAGGGCAGTGCAGACACACATTGATAATGCCAATAAAACACACTTCCGAGAATATATCATGGCGGAGTTCAGAAAGAATAAAGATCCTGAGGACTCTGCCTTTGTTCAACAGAAGCTGCAGCTTGCACATAATTATGCTCTACAGCTTAGTAGTATTCACCATCATAAGGATCTCCTATTATCTTA
CAATATTGCCATAGATCGGGAAGCAGAAAAGAAGTTGACACTGGAAAGATCAGCTGCAAGTGTTGGACTTAAACTTCCAAAACCTTATGATGATTAATATCACAAAGCCTCATGTAGATGCATGCTCATAAAACTTTGATCTACAGGGAGATGAGCTTTGAATGGTGGATGGAATTCATGGATACCTTTTAAATATGCTG
ACATGAAACAATTAATGCAGAATAGAGATATGGTTGCTTTGAAACCATATCAAATGTGCATATATGTTTAGATTGTTCTCTTGCACTGTAATCCACATGCTGTAGCCATGACAAGCTTGTCTATGTCCTTTTATTTACTAGTTTGTTTAGAGGAAAGAACCCATCAATTTTTATGGACCAAAGGTCACAGACATTATATT
CTACATCACCAAATAATGAAAATCACACATCTCATCCATCTGTTATTCCTTATTCCCAACTTATAGATGAGTCTTCTTACATCCTCCCCACTCAACTATTTTACACTAAAGTTTCTGCTACTTTCAAACCTCATTAATGCCTTCCCAAAAGGGGCTAGCTTGCAGGCTATACACTGTCAGGTGTGAATTTGTTGAATCAC
TTGAAGCTATTGTTTGAATTCAATTTTCATTTTCAGTCCAATGAAAATAAGGAAACTGCAAATTTCATTGAGTAGATTATTGCAGAAGGCTTCCTCTTCAACCTAAACCGTATGACCTCGTCCTTACACCAAAGTGTCGTATTTTTTTATCTGTTTTTTGAATTTTCTGAAGATAAATATTGAAGTACTAGTAAACATTT
C
Intron 6 GTAACGGTAG ... CTTGGTACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 6.06 | 310 | 26 | 14 |
| A2 | 1.23 | 320 | 6 | 2 |
| A3 | 1.74 | 368 | 8 | 5 |
| A4 | 2.51 | 272 | 11 | 3 |
| A5 | 3.6 | 107 | 5 | 3 |
| A6 | 1.66 | 445 | 12 | 3 |
| A7 | 2.53 | 579 | 23 | 7 |
| A8 | 2.36 | 289 | 11 | 3 |
| A9 | 1.62 | 547 | 15 | 3 |
| A10 | 2.12 | 509 | 18 | 4 |
>TRINITY_DN47301_c0_g3_i3 from sample A10 / Example spliced isoformCTTCCCTTCCTGCCTTAGCCTTGAGCAGTGCTATTTGTTTAAATATCTTTTGTATAAAAGTCTTAGAAAAGGACACCAGGAAGGACGTGACGGGGATGAAATGCGTACATTAGTTAAATGGGCAAGAAGCTCACAACGAAAACGATGGGGTCTTTTGTGATCCATGGCGTACAATCCCATTCGTCTTAGGCTTATTATGT
ATGGGAAGAGAAACCCTGAATTCATTTAAACTGTTTCGAACATCGTTTCATCGGAAGTCATCGGTAAACGAGTCGTGGTTGCAGGATTCGATCTGGTGGATCCATAGATCCAATCAGATCTAAAAATGGCGCTCACTGGACTCATGCAGATCCTCGTATGGACCTCGGTGCTTCTTCTGCTCTTCTTCAAGGCCAACTGC
TTTTATCTTCCAGGCGTCGCACCCCAAGATTTCAGTAAGGGGGATGTGCTACAAGTGAAAGTGAACAAGTTGACTTCCATAAAGACTCAGCTTCCTTATGATTACTATTCTCTGCAATACTGCCATCCGAGTAAGATTGTTGACACCTCTGAAAACCTTGGAGAAGTTCTTCGAGGTGATCGCATTGAAAACTCTCCTTA
TGTGTTTGAAATGAGAGAAAGTAAGCTGTGCAATGTTGTTTGTAAGAGGAAGTTTGATGCAAAGGCAGCAAAGGACTTTAAGGAGAAGATTGATGATGAATATCTTGTCAATATGATTCTGGATAATTTACCTGTAGCAGTAGCCAGACAGAGGGCTGAAGGAAGTCCTACTACTTATGAGCATGGCTTCCGGGTTGGGT
TCAAAGCAAGCTACACAGGGGTAAGTGGTGAATATTATTCTCATGCAAGGGCCAAGGACAAACAGAAACCTATGTCTGAGATTGAGTTCCGAAGAAGTATATTTCATCCACAATCATTTATCTTTTGATGTGATGTATCATAAGGATCTTGAAACTGATTCAGCACGCATAGTTGGATTTGAAGTTACACCATACAGTGT
GAAGCATGAGTATGAACAGCCGTGGGATAAAGACAAACCCCATTTGACAACCTGTGATCCAAATACCAAGCGCACAGTTTCAAATTCTGAGACTCCCCAAGAAGTTGTGGAAGACAAAGAAATCATATTCACTTATGATGTTACATTCCGGGATAGCCCTGTGAAATGGGCATCTCGTTGGGATACCTACCTTCTTATGA
CAGATGATCAGATCCATTGGTTCTCTATCATAAACTCATTGATGATTGTTTTGTTTCTTTCTGGAATGGTTGCAATGATCATGATGCGAACATTGTACCGAGATATCTCAAAATACAACCAATTAGAAACACAGGATGAAGCTCAGGAGGAAACAGGATGGAAGTTAGTCCATGGAGATGTGTTCAGGGCTCCAACAAAT
GCAAGCTTACTCTGTGTCTATGTGGGAACTGGAGTACAATTTTTTGCAATGACACTAGTGACAATGATATTTGCTATCCTTGGTTTCCTTTCTCCCTCGAACCGTGGAGGTTTGATGACAGCTATGCTGCTTTTATGGGTGTTTATGGGTTTGTTTGCGGGGTATGCCTCATCACGTCTATATAAGATGTTCAAGGGCAC
AGAATGGAGAAAGAACACGCTCAAGACAGCATTCTTGTTTCCAGGCATTGCGTTTTGCATTTTTTTCATTCTCAATGCACTGATATGGGGTGAGAAATCATCTGGTGCTGTTCCTTTTGGGACTATGTTTGCTTTGGTCCTTTTATGGTTTGGAATTTCTGTGCCATTGGTCTTTGTGGGCAGTTACTTTGGCTACAAGA
AACCTGCAATTGAGGATCCAGTGAAAACCAATAAAATCCCCAGGCA
>TRINITY_DN47301_c0_g3_i1 from sample A10 / Example unspliced isoform:CTTCCCTTCCTGCCTTAGCCTTGAGCAGTGCTATTTGTTTAAATATCTTTTGTATAAAAGTCTTAGAAAAGGACACCAGGAAGGACGTGACGGGGATGAAATGCGTACATTAGTTAAATGGGCAAGAAGCTCACAACGAAAACGATGGGGTCTTTTGTGATCCATGGCGTACAATCCCATTCGTCTTAGGCTTATTATGT
ATGGGAAGAGAAACCCTGAATTCATTTAAACTGTTTCGAACATCGTTTCATCGGAAGTCATCGGTAAACGAGTCGTGGTTGCAGGATTCGATCTGGTGGATCCATAGATCCAATCAGATCTAAAAATGGCGCTCACTGGACTCATGCAGATCCTCGTATGGACCTCGGTGCTTCTTCTGCTCTTCTTCAAGGCCAACTGC
TTTTATCTTCCAGGCGTCGCACCCCAAGATTTCAGTAAGGGGGATGTGCTACAAGTGAAAGTGAACAAGTTGACTTCCATAAAGACTCAGCTTCCTTATGATTACTATTCTCTGCAATACTGCCATCCGAGTAAGATTGTTGACACCTCTGAAAACCTTGGAGAAGTTCTTCGAGGTGATCGCATTGAAAACTCTCCTTA
TGTGTTTGAAATGAGAGAAAGTAAGCTGTGCAATGTTGTTTGTAAGAGGAAGTTTGATGCAAAGGCAGCAAAGGACTTTAAGGAGAAGATTGATGATGAATATCTTGTCAATATGATTCTGGATAATTTACCTGTAGCAGTAGCCAGACAGAGGGCTGAAGGAAGTCCTACTACTTATGAGCATGGCTTCCGGGTTGGGT
TCAAAGCAAGCTACACAGGGGTAAGTGGTGAATATTATTCTCATGCAAGGGCCAAGGACAAACAGAAACCTATGTCTGAGATTGgtaacggtagtttgatttcctgtctttggaaattaatgaattagttttctcatgcaaggagcacatacgagtatttgcacctttgaatttagacatgaatctgatttgaaatctgt
ttactgtcttggtacagAGTTCCGAAGAAGTATATTTCA
Intron 7 GTACGTATCC ... CCCAAGCGAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 76.92 | 6 | 0 | 20 |
| A2 | 67.86 | 9 | 0 | 19 |
| A3 | 81.08 | 7 | 1 | 30 |
| A4 | 78.26 | 5 | 0 | 18 |
| A5 | 84 | 4 | 0 | 21 |
| A6 | 79.59 | 40 | 5 | 156 |
| A7 | 71.05 | 33 | 3 | 81 |
| A8 | 76.87 | 31 | 7 | 103 |
| A9 | 79.26 | 28 | 2 | 107 |
| A10 | 72.97 | 20 | 2 | 54 |
>TRINITY_DN41856_c0_g2_i8 from sample A8 / Example spliced isoformCACGTTCTTTACCAAGGTGGGTTTTGTTCGAATTCGAACTTGTAATCACGATCACAAGTCCATTGCTCGTTAATCTGACCGTATGAAGGCTTCATCGAAGCCGACTTCATTTGCGTAAACTTGGGGTTTTATTCAATGGAGGCGTTCAAAATCTATAGGAATCTCTTGAGGGCAGTGCAGACACACATTGATAATGCCAA
TAAAACACACTTCCGAGAATATATCATGGCGGAGTTCAGAAAGAATAAAGATCCTGAGGACTCTGCCTTTGTTCAACAGAAGCTGCAGCTTGCACATAATTATGCTCTACAGCTTAGTAGTATTCACCATCATAAGGATCTCCTATTATCTTACAATATTGCCATAGATCGGGAAGCAGAAAAGAAGTTGACACTGGAAA
GATCAGCTGCAAGTGTTGGACTTAAACTTCCAAAACCTTATGATGATTAATATCACAAAGCCTCATGTAGATGCATGCTCATAAAACTTTGATCTACAGGGAGATGAGCTTTGAATGGTGGATGGAATTCATGGATACCTTTTAAATATGCTGACATGAAACAATTAATGCAGAATAGAGATATGGTTGCTTTGAAACCA
TATCAAATGTGCATATATGTTTAGATTGTTCTCTTGCACTGTAATCCACATGCTGTAGCCATGACAAGCTTGTCTATGTCCTTTTATTTACTAGTTTGTTTAGAGGAAAGAACCCATCAATTTTTATGGACCAAAGGTCACAGACATTATATTCTACATCACCAAATAATGAAAATCACACATCTCATCCATCTGTTATT
CCTTATTCCCAACTTATAGATGAGTCTTCTTACATCCTCCCCACTCAACTATTTTACACTAAAGTTTCTGCTACTTTCAAACCTCATTAATGCCTTCCCAAAAGGGGCTAGCTTGCAGGCTATACACTGTCAGGTGTGAATTTGTTGAATCACTTGAAGCTATTGTTTGAATTCAATTTTCATTTTCAGTCCAATGAAAA
TAAGGAAACTGCAAATTTCATTGAGTAGATTATTGCAGAAGGCTTCCTCTTCAACCTAAACCGTATGACCTCGTCCTTACACCAAAGTGTCGTATTTTTTTATCTGTTTTTTGAATTTTCTGAAGATAAATATTGAAGTACTAGTAAACATTTC
>TRINITY_DN41856_c0_g2_i12 from sample A8 / Example unspliced isoform:CACGTTCTTTACCAAGGTGGGTTTTGTTCGAATTCGAACTTGTAATCACGATCACAAGTCCATTGCTCGTTAATCTGACCGTATGAAGGCTTCATCGAAGCCGACTTCATTTGCgtacgtatcccatttctcattgagttcatcccagctatttttaactcggggttcgtgcagattcaccttaataatgattgcagaga
taaatttcatagccgcttagaattttattttcgcaccacaggcagaagagaaccgatgatagatcgcccgactgtgtttaattacctcagcaagactgtaattttgtggtttccctagaatttcagaaattccatgaaaacccccgtcattcccaagcgagGTAAACTTGGGGTTTTATTCAATGGAGGCGTTCAAAATC
TATAGGAATCTCTTGAGGGCAGTGCAGACACACATTGATAATGCCAATAAAACACACTTCCGAGAATATATCATGGCGGAGTTCAGAAAGAATAAAGATCCTGAGGACTCTGCCTTTGTTCAACAGAAGCTGCAGCTTGCACATAATTATGCTCTACAGCTTAGTAGTATTCACCATCATAAGGATCTCCTATTATCTTA
CAATATTGCCATAGATCGGGAAGCAGAAAAGAAGTTGACACTGGAAAGATCAGCTGCAAGTGTTGGACTTAAACTTCCAAAACCTTATGATGATTAATATCACAAAGCCTCATGTAGATGCATGCTCATAAAACTTTGATCTACAGGGAGATGAGCTTTGAATGGTGGATGGAATTCATGGATACCTTTTAAATATGCTG
ACATGAAACAATTAATGCAGAATAGAGATATGGTTGCTTTGAAACCATATCAAATGTGCATATATGTTTAGATTGTTCTCTTGCACTGTAATCCACATGCTGTAGCCATGACAAGCTTGTCTATGTCCTTTTATTTACTAGTTTGTTTAGAGGAAAGAACCCATCAATTTTTATGGACCAAAGGTCACAGACATTATATT
CTACATCACCAAATAATGAAAATCACACATCTCATCCATCTGTTATTCCTTATTCCCAACTTATAGATGAGTCTTCTTACATCCTCCCCACTCAACTATTTTACACTAAAGTTTCTGCTACTTTCAAACCTCATTAATGCCTTCCCAAAAGGGGCTAGCTTGCAGGCTATACACTGTCAGGTGTGAATTTGTTGAATCAC
TTGAAGCTATTGTTTGAATTCAATTTTCATTTTCAGTCCAATGAAAATAAGGAAACTGCAAATTTCATTGAGTAGATTATTGCAGAAGGCTTCCTCTTCAACCTAAACCGTATGACCTCGTCCTTACACCAAAGTGTCGTATTTTTTTATCTGTTTTTTGAATTTTCTGAAGATAAATATTGAAGTACTAGTAAACATTT
C
Intron 8 GTAAGTTTGG ... ACTGAATCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 3.95 | 1009.1 | 54.4 | 194.7 |
| A2 | 3.42 | 868.7 | 39.3 | 176.4 |
| A3 | 3.4 | 970 | 43.4 | 204.1 |
| A4 | 3.4 | 833.1 | 36.7 | 165.3 |
| A5 | 2.7 | 552.6 | 18.4 | 122.1 |
| A6 | 3.12 | 994.3 | 39.3 | 242.1 |
| A7 | 2.95 | 1936.1 | 72.3 | 467 |
| A8 | 2.83 | 1014.6 | 36 | 227.4 |
| A9 | 2.88 | 1907.4 | 69.3 | 396.1 |
| A10 | 2.82 | 1910.6 | 67.6 | 387.1 |
>TRINITY_DN107386_c0_g1_i6 from sample A4 / Example spliced isoformGGTGCTTGCTATACGGTTGGGTGGGGTGGGTTCCCGGTCACGAAAAAAAAATATATATACTTAGAATTTGACCTTAGAGAGACGTTGCTCACCAAAATTAGATATATAATAAATATTTGAGAAAGGTCCAGCACACCTATCACACAGCAGGTCGTGAATCACAAGTTAAAGAAATACAGGTGCCGGACGTGAAGGGACTA
TCAACCGGGTTTAAATTGCCACGAGACAGATCTCCATCAGCCAGAAGCAGTGATGGTGTCCATGGGGTTCCTGCAAGCCCTTTTATGGCCCTTGCTGCTTCTTCACCTTCTGCTGGCTTCCCCAGTAAATTCGTTTTATCTTCCAGGGGTCGCTCCTCAGGACTTTTCCAAGGGTGATGAGCTGCAAGTGAAAGCAAACA
AGTTAACCTCCACCAAGACACAACTGCCTTATGATTTCTATTATTTGGAATACTGCAAGCCAACTGAAATTGTCAACAGTGCTGAAAATCTGGGGGAAGTTCTTCGTGGTGACCGCATTGAAAACTCTCCATATGTTTTTCAAATGAGAGAAAACAAGCTGTGCAACTACGTTTGCACTAAGAAACTGGACTCAAAGTCT
GCAAAGAAGTTCAAGGATAAAATAGATGATGAATATCATGTGAACATGATACTGGATAATCTTCCTCTCGTTATAGCCAAGAAAAGGGCAGATGGAAGCCAAGCTACCTCCTATGAACATGGTTTCCGGGTGGGGTTCAAAGCTAGTTATGCAGGGAGTTCAGAAGAGAGATATTTTATCCACAATCATCTAGCTTTCAC
TGTAAAGTATCATAGGGACACTGAGACTGATACTGCACGCATTGTTGGTTTTGAAGTCGTACCTTTCAGTGTGAAGCATGAATATGAACAGCCTTGGGATCCTGAGAAGCCACAGTTAACAACCTGCAATGCAAATACAAAACGTTATGTTTCGGTTGTTGATGCTCCCCAGGAAGTGGAGGAAGGTAAAGAGGTCATCT
TCACGTATGATGTTAACTTCGAGGAAAGTCCTGTGAAATGGGCATCCCGATGGGATACATACCTTCTGATGACAGATGACCAGATACACTGGTTCTCTATCATTAATTCACTGATGATTGTTCTCTTCCTTTCTGGTATGGTGGCAATGATCATGATGAGAACTTTGTATAGGGATATCTCTAAATACAACCAGTTGGAG
ACACAAGATGAAGCCCAAGAAGAAACAGGATGGAAATTGGTCCATGGAGATGTGTTCAGGCCTCCTACTCATTCTAGCTTGCTGTGTGTGTATGTGGGAACTGGTGTTCAGTTTTTTGGAATGACACTTGTGACAATGATATTTGCTTTGCTTGGTTTCCTTTCTCCTTCCAACCGTGGTGGCTTGATGACAGCTATGGT
TCTACTGTGGGTGTTCATGGGTTTGTTCGCTGGCTACTCTTCTGCTCGGCTATATAAGATGTTCAAGGGTTCAGAATGGAAGAAAAACACACTAAAGACTGCTTTCATGTTTCCTGGAATTGTTTTCTGCATTTTCTTTGTATTGAATGCATTGATATGGGGCGAGAAATCATCTGGTGCTGTACCTTTTGGGACTATGT
TTGCTTTGGTCTTTTTATGGTTTGGAATTTCTGTACCCTTGGTTTTTGTTGGCAGCTATTTCGGCTACAAGAAACCTGCAATTGAAGATCCAGTGAAAACAAACAAAATTCCCAGGCAAATTCCAGAACAGGCTTGGTACATGCAACCCGTTTTCTCCGTACTCATTGGTGGCATATTGCCGTTTGGAGCTGTTTTCATT
GAGCTGTTTTTCATCCTGACTTCTATATGGCTGAATCAGTTCTACTACATCTTTGGGTTCTTGTTTATAGTCTTTGTTATCCTGCTCGTCACTTGTGCAGAGATCACCATTGTTCTCTGCTACTTCCAGCTATGCAGTGAAGACTATCACTGGTGGTGGAGAGCATATCTGACTTCAGGCTCTTCGGCACTCTACTTGTT
TCTATACGCAATATTTTACTTCTTCACGAAACTTGAGATTACTAAACTTGTTTCTGGCATTTTGTACTTCGGCTACATGACGATCATTTCTTATGCTTTCTTTGTATTGACGGGTACTATCGGCTTCTATGCATGCTTCTGGTTTGTCCGAAAAATTTACTCATCGGTGAAGATTGACTAAAGCTGCCTGGCATGTCTAG
TTTTTTCGCAAAATTACAAAGGGTTATATGGTTAATGGCAAGGAAGCAGAGAATAGCAGAGAATACTTACGTGTACAAGTTACTCGTTATTCGGAACTGCCAGGTCGCATGCAAAGAAAAGCCGACTTGTAGAAAAGTAAGAGCTATGTGGTGAATGCTACTTCTTGATGCCTTTATGATGAAGGCTACCAATTTGCTAA
AGCCACTATGGAAATTTCTGTTAGTTTGCTTTGTATTTAGAAAATTGTGTTAGTATTAACATTTATTTCTTTGATTCTCAGATTCAACATTATTTTGATCAAAAGTGATCCAGCTAGTGTTTTGTTTTTAGGAATGGCAGAAAATGCAAACACCGCAGCTTTTTGAGTCTGAATATTTGCATTTCTTTTCTTCACCGCAA
AGTAATTGGTTGTAATCGTTTCTTTGTAGTTTTGGGGTATTGGGTGGGTGATCCATTCTGTCAAAGTATTATGCAAAATACTCACATGATTGATTTGAGGCTTTGGATAGCCACATAACTTTAGGTGACTTACAATATTCTGCAAGTATCTGAGAAGGTATCTGAGAAGGCAACATGTTTTATGCCATTAGTTTGGAACC
ATATTAGTGGAGTTTTTGGTTATTTAATTCATTTCAGACAAGAATGTAGATTAAAAATCAGCTATTTGTAGTTTCCCCTCTAGGTTTGAATTTTGACATTCTTCTGGACAGTGTTGTCGTATATTAGTTACCATGGTGAGAATCTACTTTCCCATGGGGATAAACTGAGCAATTTCTGCAGATACAGGAATAAGTTGCCT
CGCAGGCCAACTGAGGGACAATCAAAAGGCTATGTGAGAGAAACAATGTTCAGTTAAGCCA
>TRINITY_DN107386_c0_g1_i10 from sample A4 / Example unspliced isoform:ATGATGAATATCATGTGAACATgtaagtttggatggacttcaaaatagctccagagattatctttttgctctattttactcggtagcttcaaatgacttggcctttttgctagccttatttagtcctgtcattctgttggaggaatttattctgtacaatcaagattgcaaaatattagtctcaatctgcgcactcacct
gttctagctttctactgaatcagGATACTGGATAATCTTCCTCTCGTTATAGCCAAGAAAAGGGCAGATGGAAGCCAAGCTACCTCCTATGAACATGGTTTCCGGGTGGGGTTCAAAGCTAGTTATGCAGGGAGTTCAGAAGAGAGATATTTTATCCACAATCATCTAGCTTTCACTGTAAAGTATCATAGGGACACTGA
GACTGATACTGCACGCATTGTTGGTTTTGAAGTCGTACCTTTCAGTGTGAAGCATGAATATGAACAGCCTTGGGATCCTGAGAAGCCACAGTTAACAACCTGCAATGCAAATACAAAACGTTATGTTTCGGTTGTTGATGCTCCCCAGGAAGTGGAGGAAGGTAAAGAGGTCATCTTCACGTATGATGTTAACTTCGAGG
AAAGTCCTGTGAAATGGGCATCCCGATGGGATACATACCTTCTGATGACAGATGACCAGATACACTGGTTCTCTATCATTAATTCACTGATGATTGTTCTCTTCCTTTCTGGTATGGTGGCAATGATCATGATGAGAACTTTGTATAGGGATATCTCTAAATACAACCAGTTGGAGACACAAGATGAAGCCCAAGAAGAA
ACAGGATGGAAATTGGTCCATGGAGATGTGTTCAGGCCTCCTACTCATTCTAGCTTGCTGTGTGTGTATGTGGGAACTGGTGTTCAGTTTTTTGGAATGACACTTGTGACAATGATATTTGCTTTGCTTGGTTTCCTTTCTCCTTCCAACCGTGGTGGCTTGATGACAGCTATGGTTCTACTGTGGGTGTTCATGGGTTT
GTTCGCTGGCTACTCTTCTGCTCGGCTATATAAGATGTTCAAGGGTTCAGAATGGAAGAAAAACACACTAAAGACTGCTTTCATGTTTCCTGGAATTGTTTTCTGCATTTTCTTTGTATTGAATGCATTGATATGGGGCGAGAAATCATCTGGTGCTGTACCTTTTGGGACTATGTTTGCTTTGGTC
Intron 9 GTACTATTTT ... TTTCAATCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 66.98 | 35 | 82 | 60 |
| A2 | 71.21 | 19 | 61 | 33 |
| A3 | 66.52 | 37 | 104 | 43 |
| A4 | 60.47 | 34 | 76 | 28 |
| A5 | 70.53 | 14 | 34 | 33 |
| A6 | 76.8 | 273 | 974 | 833 |
| A7 | 72.72 | 187 | 554 | 443 |
| A8 | 78 | 239 | 857 | 838 |
| A9 | 75.73 | 190 | 588 | 598 |
| A10 | 70.52 | 97 | 283 | 181 |
>TRINITY_DN125985_c2_g1_i1 from sample A1 / Example spliced isoformTAAAGACGCAGCTTCCTTATGATTTTTATTCTCTGGATTACTGTAAACCAAAAACAATTGTCAACAGTGCTGAAAATCTTGGAGAAGTTCTTCGTGGAGATCGCATTGAGAACTCTCCTTATGCGTTCCATATGAGAGAGGTGAAGCTCTGTAATTATGTATGCCGGATAAAGCTCGATGCAAAGTCCGCAAAGAACTTT
AAGGAGAAAATAGATGATGAATACCGTGTTAACATGATTCTGGATAATCTACCTGTGGCTGTAGCCAGACAAAGAGCTGATGGAACCTCATATGAACATGGCTTCCGTGTTGGGTTTAAAGCAAGCTATGCAGGGAGTTCAGAAGAGAGATACTTCATACACAACCATCTGTCTTTTGAGGTTAAGTTTCACAAAGATTC
AGAGGCTGATTCTGCTCGGATTGTTGGATTTGAAGTCACACCATATAGCGTCAAGCATGAGCATGAGCAACCTTGGTCTGAGGATAATCCCCGTTTGACAACCTGCAACCCAAACACCAAGCACTACGTTTCACAAACTAATAGTCCGCAAGAAGTTGATGAGGGTAAAGATATTATATTTACCTATGATGTGGCATTCA
AGGAAAGCCCTATCAAATGGGCTTCTCGATGGGATACATATCTTCTCATGACAGATGATCAGATCCACTGGTTCTCTATTATCAACTCATTAATGATTGTTTTGTTCCTTTCTGGGATGGTGGCAATGATTATGATGAGAACCTTGTATCGGGATATCTCAAACTACAATCAACTGGAGACACAGGATGAAGCCCAAGAA
GAAACCGGATGGAAACTTGTCCATGGAGATGCATTCAGGCCCCCAAATAATGCAGGTCTGCTCTGTGTCTATGCAGGAACTGGAGTACAGTTTTTTGGGATGACACTTGTTACAATGATATTTGCCATGCTTGGGTTTCTTTCACCATCCAACCGTGGTGGACTGATGACAGCTATGGTTCTCTTGTGGGTGTTCATGGG
TTTGTTTGCTGGTTACTCTTCTGCTCGTCTGTATAAGATGTTTAAGGGCACAGAATGGAAAACAAACACACTGAAGACAGCTTTCACGTTCCCTGGAATTGTTTTTGGCATTTTCTTTGTTCTCAATGCACTGATTTGGGGTGAAAAGTCCTCTGGTGCATTACCATTTGGAACAATGTTTGCTTTGGTATTTTTATGGT
TTGGGATATCTGTGCCTTTGGTCTTTGTTGGTAGTTACTTTGGCTACAAGAAACCTGCAATTGAAGATCCTGTTAAGACAAATAAAATCCCCAGGCAGATTCCAGAGCAGGCATGGTACATGCAGCCAGTTTTCTCCGTACTCATTGGAGGCATATTGCCATTTGGTGCAGTTTTCATTGAATTATTCTTCATCTTAACG
TCGATCTGGCTACATCAATTCTATTACATTTTTGGGTTCCTGTTCATTGTCTTTGTTATCCTTATTGTTACTTGTGCAGAGATCACTATTGTCCTTTGCTACTTTCAGTTGTGTAGTGAGGACTACCACTGGTGGTGGAGAGCTTATCTAACTTCAGGCTCGTCTGCACTGTACTTATTCCTGTATGCTACATTCTACTT
CTTCACCAAGCTGGAGATCACAAAACTTGTGTCTGGTATTCTGTACTTTGGCTACATGACAATTATCTCATATGCTTTCTTTGTATTGACTGGTACAATCGGTTTCTATGCGTGCTTCTGGTTTGTACGGACCATTTATGCTTCAGTGAAGATTGACTGAAGCTACATGTAGCCAAATTTTTCTCGGGGCTCAAATTTGC
ATTTGTTGAGCAGAATCAAGTAGTAGAATGGAAGACGTGCATTCTTTTCTCTGGTATTTAGGAAACTAGAACAGGAGTTTTCATGTGCTAGCAAGAGGAGATATCTTAGAGGATATCATGAACATCACGTATCAGTTGGTTACAAGACTCTGGTGGCATACCATTTGCTATGCAAGATTTATGATATATGATATACAGAT
ATTTTTGGTATTCAGTTGCTTCCAACATAAGCTTTCAGACTTGGACAATCATGCTATGCTTTATTCACCTATGTTATAACACTTACAGAGGTGTTGTTATGGTATAGAGATATTTAATACTTTGCCAACATAGGTAGGATTCTGACATTGAATGTTGTAATGCTTTAAATATCCAAAAGATTAATATGCTTTAAAT
>TRINITY_DN125985_c2_g1_i8 from sample A1 / Example unspliced isoform:TAAAGACGCAGCTTCCTTATGATTTTTATTCTCTGGATTACTGTAAACCAAAAACAATTGTCAACAGTGCTGAAAATCTTGGAGAAGTTCTTCGTGGAGATCGCATTGAGAACTCTCCTTATGTGGTAAGTATTATGGTTTCCGTTCTTGGCTCAGTTCTTCATTGGATTGGTCCTAAGGACTCGAGTTTTCTTTTCTTT
GCGGAATTTTTTGAAGTTCCATATGAGAGAGGTGAAGCTCTGTAATTATGTATGCCGGATAAAGCTCGATGCAAAGTCCGCAAAGAACTTTAAGGAGAAAATAGATGATGAATACCGTGTTAACATGATTCTGGATAATCTACCTGTGGCTGTAGCCAGACAAAGAGCTGATGGAACCTCATATGAACATGGCTTCCGTG
TTGGGTTTAAAGCAAGCTATGCAGGGAGTTCAGAAGAGAGATACTTCATACACAACCATCTGTCTTTTGAGGTTAAGTTTCACAAAGATTCAGAGGCTGATTCTGCTCGGATTGTTGGATTTGAAGTCACACCATATAGCGTCAAGCATGAGCATGAGCAACCTTGGTCTGAGGATAATCCCCGTTTGACAACCTGCAAC
CCAAACACCAAGCACTACGTTTCACAAACTAATAGTCCGCAAGAAGTTGATGAGGGTAAAGATATTATATTTACCTATGATGTGGCATTCAAGGAAAGCCCTATCAAATGGGCTTCTCGATGGGATACATATCTTCTCATGACAGATGATCAGATCCACTGGTTCTCTATTATCAACTCATTAATGATTGTTTTGTTCCT
TTCTGGGATGGTGGCAATGATTATGATGAGAACCTTGTATCGGGATATCTCAAACTACAATCAACTGGAGACACAGGATGAAGCCCAAGAAGAAACCGGATGGAAACTTGTCCATGGAGATGCATTCAGGCCCCCAAATAATGCAGGTCTGCTCTGTGTCTATGCAGGAACTGGAGTACAGTTTTTTGGGATGACACTTG
TTACAATGATATTTGCCATGCTTGGGTTTCTTTCACCATCCAACCGTGGTGGACTGATGACAGCTATGGTTCTCTTGTGGGTGTTCATGGGTTTGTTTGCTGGTTACTCTTCTGCTCGTCTGTATAAGATGTTTAAGGGCACAGAATGGAAAACAAACACACTGAAGACAGCTTTCACGTTCCCTGGAATTGTTTTTGGC
ATTTTCTTTGTTCTCAATGCACTGATTTGGGGTGAAAAGTCCTCTGGTGCATTACCATTTGGAACAATGTTTGCTTTGGTATTTTTATGGTTTGGGATATCTGTGCCTTTGGTCTTTGTTGGTAGTTACTTTGGCTACAAGAAACCTGCAATTGAAGATCCTGTTAAGACAAATAAAATCCCCAGGCAGATTCCAGAGCA
GGCATGGTACATGCAGCCAGTTTTCTCCGTACTCATTGGAGGCATATTGCCATTTGGTGCAGTTTTCATTGAATTATTCTTCATCTTAACGTCGATCTGGCTACATCAATTCTATTACATTTTTGGGTTCCTGTTCATTGTCTTTGTTATCCTTATTGTTACTTGTGCAGAGATCACTATTGTCCTTTGCTACTTTCAGT
TGTGTAGTGAGGACTACCACTGGTGGTGGAGAGCTTATCTAACTTCAGGCTCGTCTGCACTGTACTTATTCCTGTATGCTACATTCTACTTCTTCACCAAGCTGGAGATCACAAAACTTGTGTCTGGTATTCTGTACTTTGGCTACATGACAATTATCTCATATGCTTTCTTTGTATTGACTGGTACAATCGGTTTCTAT
GCGTGCTTCTGGTTTGTACGGACCATTTATGCTTCAGTGAAGATTGACTGAAGCTACATGTAGCCAAATTTTTCTCGGGGCTCAAATTTGCATTTGTTGAGCAGAATCAAGTAGTAGAATGGAAGACGTGCATTCTTTTCTCTGGTATTTAGGAAACTAGAACAGGAGTTTTCATGTGCTAGCAAGAGGAGATATCTTAG
AGGATATCATGAACATCACGTATCAGTTGGTTACAAGgtactatttttttaaagttgcagactaccaagttattctgcattgtactcaaatgaggtagttaggacagaattttttccttgatgtactgtttgcaatgaattatggctcatacttattatggcttccatgcctttcaatcagACTCTGGTGGCATACCATT
TGCTATGCAAGATTTATGATATATGATATACAGATATTTTTGGTATTCAGTTGCTTCCAACATAAGCTTTCAGACTTGGACAATCATGCTATGCTTTATTCACCTATGTTATAACACTTACAGAGGTGTTGTTATGGTATAGAGATATTTAATACTTTGCCAACATAGGTAGGATTCTGACATTGAATGTTGTAATGCTT
TAAATATCCAAAAGATTAATATGCTTTAAAT
Intron 10 GTGAGTATTT ... CATGTGTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 17.02 | 1007 | 192 | 221 |
| A2 | 16.76 | 852 | 178 | 165 |
| A3 | 15.47 | 961.6 | 202 | 150 |
| A4 | 15.67 | 837 | 151 | 160 |
| A5 | 17.74 | 466 | 117 | 84 |
| A6 | 14.66 | 1068 | 222 | 145 |
| A7 | 14.79 | 2016.8 | 403 | 297 |
| A8 | 16.18 | 862.4 | 184 | 149 |
| A9 | 15.21 | 1842.2 | 360 | 301 |
| A10 | 15.61 | 1829.8 | 390 | 287 |
>TRINITY_DN107386_c0_g1_i6 from sample A4 / Example spliced isoformGGTGCTTGCTATACGGTTGGGTGGGGTGGGTTCCCGGTCACGAAAAAAAAATATATATACTTAGAATTTGACCTTAGAGAGACGTTGCTCACCAAAATTAGATATATAATAAATATTTGAGAAAGGTCCAGCACACCTATCACACAGCAGGTCGTGAATCACAAGTTAAAGAAATACAGGTGCCGGACGTGAAGGGACTA
TCAACCGGGTTTAAATTGCCACGAGACAGATCTCCATCAGCCAGAAGCAGTGATGGTGTCCATGGGGTTCCTGCAAGCCCTTTTATGGCCCTTGCTGCTTCTTCACCTTCTGCTGGCTTCCCCAGTAAATTCGTTTTATCTTCCAGGGGTCGCTCCTCAGGACTTTTCCAAGGGTGATGAGCTGCAAGTGAAAGCAAACA
AGTTAACCTCCACCAAGACACAACTGCCTTATGATTTCTATTATTTGGAATACTGCAAGCCAACTGAAATTGTCAACAGTGCTGAAAATCTGGGGGAAGTTCTTCGTGGTGACCGCATTGAAAACTCTCCATATGTTTTTCAAATGAGAGAAAACAAGCTGTGCAACTACGTTTGCACTAAGAAACTGGACTCAAAGTCT
GCAAAGAAGTTCAAGGATAAAATAGATGATGAATATCATGTGAACATGATACTGGATAATCTTCCTCTCGTTATAGCCAAGAAAAGGGCAGATGGAAGCCAAGCTACCTCCTATGAACATGGTTTCCGGGTGGGGTTCAAAGCTAGTTATGCAGGGAGTTCAGAAGAGAGATATTTTATCCACAATCATCTAGCTTTCAC
TGTAAAGTATCATAGGGACACTGAGACTGATACTGCACGCATTGTTGGTTTTGAAGTCGTACCTTTCAGTGTGAAGCATGAATATGAACAGCCTTGGGATCCTGAGAAGCCACAGTTAACAACCTGCAATGCAAATACAAAACGTTATGTTTCGGTTGTTGATGCTCCCCAGGAAGTGGAGGAAGGTAAAGAGGTCATCT
TCACGTATGATGTTAACTTCGAGGAAAGTCCTGTGAAATGGGCATCCCGATGGGATACATACCTTCTGATGACAGATGACCAGATACACTGGTTCTCTATCATTAATTCACTGATGATTGTTCTCTTCCTTTCTGGTATGGTGGCAATGATCATGATGAGAACTTTGTATAGGGATATCTCTAAATACAACCAGTTGGAG
ACACAAGATGAAGCCCAAGAAGAAACAGGATGGAAATTGGTCCATGGAGATGTGTTCAGGCCTCCTACTCATTCTAGCTTGCTGTGTGTGTATGTGGGAACTGGTGTTCAGTTTTTTGGAATGACACTTGTGACAATGATATTTGCTTTGCTTGGTTTCCTTTCTCCTTCCAACCGTGGTGGCTTGATGACAGCTATGGT
TCTACTGTGGGTGTTCATGGGTTTGTTCGCTGGCTACTCTTCTGCTCGGCTATATAAGATGTTCAAGGGTTCAGAATGGAAGAAAAACACACTAAAGACTGCTTTCATGTTTCCTGGAATTGTTTTCTGCATTTTCTTTGTATTGAATGCATTGATATGGGGCGAGAAATCATCTGGTGCTGTACCTTTTGGGACTATGT
TTGCTTTGGTCTTTTTATGGTTTGGAATTTCTGTACCCTTGGTTTTTGTTGGCAGCTATTTCGGCTACAAGAAACCTGCAATTGAAGATCCAGTGAAAACAAACAAAATTCCCAGGCAAATTCCAGAACAGGCTTGGTACATGCAACCCGTTTTCTCCGTACTCATTGGTGGCATATTGCCGTTTGGAGCTGTTTTCATT
GAGCTGTTTTTCATCCTGACTTCTATATGGCTGAATCAGTTCTACTACATCTTTGGGTTCTTGTTTATAGTCTTTGTTATCCTGCTCGTCACTTGTGCAGAGATCACCATTGTTCTCTGCTACTTCCAGCTATGCAGTGAAGACTATCACTGGTGGTGGAGAGCATATCTGACTTCAGGCTCTTCGGCACTCTACTTGTT
TCTATACGCAATATTTTACTTCTTCACGAAACTTGAGATTACTAAACTTGTTTCTGGCATTTTGTACTTCGGCTACATGACGATCATTTCTTATGCTTTCTTTGTATTGACGGGTACTATCGGCTTCTATGCATGCTTCTGGTTTGTCCGAAAAATTTACTCATCGGTGAAGATTGACTAAAGCTGCCTGGCATGTCTAG
TTTTTTCGCAAAATTACAAAGGGTTATATGGTTAATGGCAAGGAAGCAGAGAATAGCAGAGAATACTTACGTGTACAAGTTACTCGTTATTCGGAACTGCCAGGTCGCATGCAAAGAAAAGCCGACTTGTAGAAAAGTAAGAGCTATGTGGTGAATGCTACTTCTTGATGCCTTTATGATGAAGGCTACCAATTTGCTAA
AGCCACTATGGAAATTTCTGTTAGTTTGCTTTGTATTTAGAAAATTGTGTTAGTATTAACATTTATTTCTTTGATTCTCAGATTCAACATTATTTTGATCAAAAGTGATCCAGCTAGTGTTTTGTTTTTAGGAATGGCAGAAAATGCAAACACCGCAGCTTTTTGAGTCTGAATATTTGCATTTCTTTTCTTCACCGCAA
AGTAATTGGTTGTAATCGTTTCTTTGTAGTTTTGGGGTATTGGGTGGGTGATCCATTCTGTCAAAGTATTATGCAAAATACTCACATGATTGATTTGAGGCTTTGGATAGCCACATAACTTTAGGTGACTTACAATATTCTGCAAGTATCTGAGAAGGTATCTGAGAAGGCAACATGTTTTATGCCATTAGTTTGGAACC
ATATTAGTGGAGTTTTTGGTTATTTAATTCATTTCAGACAAGAATGTAGATTAAAAATCAGCTATTTGTAGTTTCCCCTCTAGGTTTGAATTTTGACATTCTTCTGGACAGTGTTGTCGTATATTAGTTACCATGGTGAGAATCTACTTTCCCATGGGGATAAACTGAGCAATTTCTGCAGATACAGGAATAAGTTGCCT
CGCAGGCCAACTGAGGGACAATCAAAAGGCTATGTGAGAGAAACAATGTTCAGTTAAGCCA
>TRINITY_DN107386_c0_g1_i2 from sample A4 / Example unspliced isoform:TTAAATCAATGCAAAATGAAGCAAAACCTTTAAAAACAAAATTTCAACGTACATAGAACTTGGATCACGATAAACGAAATTGGATGTCCTTTTTTTTCATAGTAGAATCGTTGGCGTGTGCCTGGAGGCGAAGGCACCGTGAGATCACGAAACGTGGGATTCGATCCGAGGTGGGGACGACCACAACCGGCCGCTCCAGC
CACCCCACCTACAGCAGGACCTCAACGAAATCGAATGCCTACATATAAACTATAATCTAATCGGTACACGTTTTACTTACCCTTTAAAAATATATATACTTAAAATTTATGCTTGCTATACGGTGGGGGTGACTATCCGGTCAACTGTGCTTGCTATACGGTGGTGCTTGCTATACGGTTGGGTGGGGTGGGTTCCCGGT
CACGAAAAAAAAATATATATACTTAGAATTTGACCTTAGAGAGACGTTGCTCACCAAAATTAGATATATAATAAATATTTGAGAAAGGTCCAGCACACCTATCACACAGCAGGTCGTGAATCACAAGTTAAAGAAATACAGGTGCCGGACGTGAAGGGACTATCAACCGGGTTTAAATTGCCACGGTAATATAATTTTCC
TCGAGTACATGGCTTCTACTTCTTATGTTGCAGCGTAAACCCTTTGATTCTCAATACCAAAGCATATCAGAGCAGAGACAGATCTCCATCAGCCAGAAGCAGTGATGGTGTCCATGGGGTTCCTGCAAGCCCTTTTATGGCCCTTGCTGCTTCTTCACCTTCTGCTGGCTTCCCCAGTAAATTCGTTTTATCTTCCAGGG
GTCGCTCCTCAGGACTTTTCCAAGGGTGATGAGCTGCAAGTGAAAGCAAACAAGTTAACCTCCACCAAGACACAACTGCCTTATGATTTCTATTATTTGGAATACTGCAAGCCAACTGAAATTGTCAACAGTGCTGAAAATCTGGGGGAAGTTCTTCGTGGTGACCGCATTGAAAACTCTCCATATGTTgtgagtatttt
tatgggctacatttgtttttcttttcctttcaatttggcacttgttcgtcttgtcatatttttgtatggttcaaaatcgttatttgcatgtgtcagTTTCAAATGAGAGAAAACAAGCTGTGCAACTACGTTTGCACTAAGAAACTGGACTCAAAGTCTGCAAAGAAGTTCAAGGATAAAATAGATGATGAATATCATGT
GAACATGATACTGGATAATCTTCCTCTCGTTATAGCCAAGAAAAGGGCAGATGGAAGCCAAGCTACCTCCTATGAACATGGTTTCCGGGTGGGGTTCAAAGCTAGTTATGCAGGGAGTTCAGAAGAGAGATATTTTATCCACAATCATCTAGCTTTCACTGTAAAGTATCATAGGGACACTGAGACTGATACTGCACGCA
TTGTTGGTTTTGAAGTCGTACCTTTCAGTGTGAAGCATGAATATGAACAGCCTTGGGATCCTGAGAAGCCACAGTTAACAACCTGCAATGCAAATACAAAACGTTATGTTTCGGTTGTTGATGCTCCCCAGGAAGTGGAGGAAGGTAAAGAGGTCATCTTCACGTATGATGTTAACTTCGAGGAAAGTCCTGTGAAATGG
GCATCCCGATGGGATACATACCTTCTGATGACAGATGACCAGATACACTGGTTCTCTATCATTAATTCACTGATGATTGTTCTCTTCCTTTCTGGTATGGTGGCAATGATCATGATGAGAACTTTGTATAGGGATATCTCTAAATACAACCAGTTGGAGACACAAGATGAAGCCCAAGAAGAAACAGGATGGAAATTGGT
CCATGGAGATGTGTTCAGGCCTCCTACTCATTCTAGCTTGCTGTGTGTGTATGTGGGAACTGGTGTTCAGTTTTTTGGAATGACACTTGTGACAATGATATTTGCTTTGCTTGGTTTCCTTTCTCCTTCCAACCGTGGTGGCTTGATGACAGCTATGGTTCTACTGTGGGTGTTCATGGGTTTGTTCGCTGGCTACTCTT
CTGCTCGGCTATATAAGATGTTCAAGGGTTCAGAATGGAAGAAAAACACACTAAAGACTGCTTTCATGTTTCCTGGAATTGTTTTCTGCATTTTCTTTGTATTGAATGCATTGATATGGGGCGAGAAATCATCTGGTGCTGTACCTTTTGGGACTATGTTTGCTTTGGTCTTTTTATGGTTTGGAATTTCTGTACCCTTG
GTTTTTGTTGGCAGCTATTTCGGCTACAAGAAACCTGCAATTGAAGATCCAGTGAAAACAAACAAAATTCCCAGGCAAATTCCAGAACAGGCTTGGTACATGCAACCCGTTTTCTCCGTACTCATTGGTGGCATATTGCCGTTTGGAGCTGTTTTCATTGAGCTGTTTTTCATCCTGACTTCTATATGGCTGAATCAGTT
CTACTACATCTTTGGGTTCTTGTTTATAGTCTTTGTTATCCTGCTCGTCACTTGTGCAGAGATCACCATTGTTCTCTGCTACTTCCAGCTATGCAGTGAAGACTATCACTGGTGGTGGAGAGCATATCTGACTTCAGGCTCTTCGGCACTCTACTTGTTTCTATACGCAATATTTTACTTCTTCACGAAACTTGAGATTA
CTAAACTTGTTTCTGGCATTTTGTACTTCGGCTACATGACGATCATTTCTTATGCTTTCTTTGTATTGACGGGTACTATCGGCTTCTATGCATGCTTCTGGTTTGTCCGAAAAATTTACTCATCGGTGAAGATTGACTAAAGCTGCCTGGCATGTCTAGTTTTTTCGCAAAATTACAAAGGGTTATATGGTTAATGGCAA
GGAAGCAGAGAATAGCAGAGAATACTTACGTGTACAAGTTACTCGTTATTCGGAACTGCCAGGTCGCATGCAAAGAAAAGCCGACTTGTAGAAAAGTAAGAGCTATGTGGTGAATGCTACTTCTTGATGCCTTTATGATGAAGGCTACCAATTTGCTAAAGCCACTATGGAAATTTCTGTTAGTTTGCTTTGTATTTAGA
AAATTGTGTTAGTATTAACATTTATTTCTTTGATTCTCAGATTCAACATTATTTTGATCAAAAGTGATCCAGCTAGTGTTTTGTTTTTAGGAATGGCAGAAAATGCAAACACCGCAGCTTTTTGAGTCTGAATATTTGCATTTCTTTTCTTCACCGCAAAGTAATTGGTTGTAATCGTTTCTTTGTAGTTTTGGGGTATT
GGGTGGGTGATCCATTCTGTCAAAGTATTATGCAAAATACTCACATGATTGATTTGAGGCTTTGGATAGCCACATAACTTTAGGTGACTTACAATATTCTGCAAGTATCTGAGAAGGTATCTGAGAAGGCAACATGTTTTATGCCATTAGTTTGGAACCATATTAGTGGAGTTTTTGGTTATTTAATTCATTTCAGACAA
GAATGTAGATTAAAAATCAGCTATTTGTAGTTTCCCCTCTAGGTTTGAATTTTGACATTCTTCTGGACAGTGTTGTCGTATATTAGTTACCATGGTGAGAATCTACTTTCCCATGGGGATAAACTGAGCAATTTCTGCAGATACAGGAATAAGTTGCCTCGCAGGCCAACTGAGGGACAATCAAAAGGCTATGTGAGAGA
AACAATGTTCAGTTAAGCCA
Intron 11 GTATAAAAGT ... TCTGCGGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 32.5 | 27 | 4 | 13 |
| A2 | 22.22 | 28 | 2 | 8 |
| A3 | 25 | 21 | 5 | 7 |
| A4 | 32.5 | 27 | 3 | 13 |
| A5 | 27.78 | 13 | 1 | 5 |
| A6 | 4.55 | 21 | 0 | 1 |
| A7 | 16.33 | 41 | 3 | 8 |
| A8 | 37.04 | 17 | 1 | 10 |
| A9 | 8.7 | 63 | 1 | 6 |
| A10 | 18.18 | 54 | 3 | 12 |
>TRINITY_DN125985_c2_g1_i8 from sample A1 / Example spliced isoformTAAAGACGCAGCTTCCTTATGATTTTTATTCTCTGGATTACTGTAAACCAAAAACAATTGTCAACAGTGCTGAAAATCTTGGAGAAGTTCTTCGTGGAGATCGCATTGAGAACTCTCCTTATGTGGTAAGTATTATGGTTTCCGTTCTTGGCTCAGTTCTTCATTGGATTGGTCCTAAGGACTCGAGTTTTCTTTTCTTT
GCGGAATTTTTTGAAGTTCCATATGAGAGAGGTGAAGCTCTGTAATTATGTATGCCGGATAAAGCTCGATGCAAAGTCCGCAAAGAACTTTAAGGAGAAAATAGATGATGAATACCGTGTTAACATGATTCTGGATAATCTACCTGTGGCTGTAGCCAGACAAAGAGCTGATGGAACCTCATATGAACATGGCTTCCGTG
TTGGGTTTAAAGCAAGCTATGCAGGGAGTTCAGAAGAGAGATACTTCATACACAACCATCTGTCTTTTGAGGTTAAGTTTCACAAAGATTCAGAGGCTGATTCTGCTCGGATTGTTGGATTTGAAGTCACACCATATAGCGTCAAGCATGAGCATGAGCAACCTTGGTCTGAGGATAATCCCCGTTTGACAACCTGCAAC
CCAAACACCAAGCACTACGTTTCACAAACTAATAGTCCGCAAGAAGTTGATGAGGGTAAAGATATTATATTTACCTATGATGTGGCATTCAAGGAAAGCCCTATCAAATGGGCTTCTCGATGGGATACATATCTTCTCATGACAGATGATCAGATCCACTGGTTCTCTATTATCAACTCATTAATGATTGTTTTGTTCCT
TTCTGGGATGGTGGCAATGATTATGATGAGAACCTTGTATCGGGATATCTCAAACTACAATCAACTGGAGACACAGGATGAAGCCCAAGAAGAAACCGGATGGAAACTTGTCCATGGAGATGCATTCAGGCCCCCAAATAATGCAGGTCTGCTCTGTGTCTATGCAGGAACTGGAGTACAGTTTTTTGGGATGACACTTG
TTACAATGATATTTGCCATGCTTGGGTTTCTTTCACCATCCAACCGTGGTGGACTGATGACAGCTATGGTTCTCTTGTGGGTGTTCATGGGTTTGTTTGCTGGTTACTCTTCTGCTCGTCTGTATAAGATGTTTAAGGGCACAGAATGGAAAACAAACACACTGAAGACAGCTTTCACGTTCCCTGGAATTGTTTTTGGC
ATTTTCTTTGTTCTCAATGCACTGATTTGGGGTGAAAAGTCCTCTGGTGCATTACCATTTGGAACAATGTTTGCTTTGGTATTTTTATGGTTTGGGATATCTGTGCCTTTGGTCTTTGTTGGTAGTTACTTTGGCTACAAGAAACCTGCAATTGAAGATCCTGTTAAGACAAATAAAATCCCCAGGCAGATTCCAGAGCA
GGCATGGTACATGCAGCCAGTTTTCTCCGTACTCATTGGAGGCATATTGCCATTTGGTGCAGTTTTCATTGAATTATTCTTCATCTTAACGTCGATCTGGCTACATCAATTCTATTACATTTTTGGGTTCCTGTTCATTGTCTTTGTTATCCTTATTGTTACTTGTGCAGAGATCACTATTGTCCTTTGCTACTTTCAGT
TGTGTAGTGAGGACTACCACTGGTGGTGGAGAGCTTATCTAACTTCAGGCTCGTCTGCACTGTACTTATTCCTGTATGCTACATTCTACTTCTTCACCAAGCTGGAGATCACAAAACTTGTGTCTGGTATTCTGTACTTTGGCTACATGACAATTATCTCATATGCTTTCTTTGTATTGACTGGTACAATCGGTTTCTAT
GCGTGCTTCTGGTTTGTACGGACCATTTATGCTTCAGTGAAGATTGACTGAAGCTACATGTAGCCAAATTTTTCTCGGGGCTCAAATTTGCATTTGTTGAGCAGAATCAAGTAGTAGAATGGAAGACGTGCATTCTTTTCTCTGGTATTTAGGAAACTAGAACAGGAGTTTTCATGTGCTAGCAAGAGGAGATATCTTAG
AGGATATCATGAACATCACGTATCAGTTGGTTACAAGGTACTATTTTTTTAAAGTTGCAGACTACCAAGTTATTCTGCATTGTACTCAAATGAGGTAGTTAGGACAGAATTTTTTCCTTGATGTACTGTTTGCAATGAATTATGGCTCATACTTATTATGGCTTCCATGCCTTTCAATCAGACTCTGGTGGCATACCATT
TGCTATGCAAGATTTATGATATATGATATACAGATATTTTTGGTATTCAGTTGCTTCCAACATAAGCTTTCAGACTTGGACAATCATGCTATGCTTTATTCACCTATGTTATAACACTTACAGAGGTGTTGTTATGGTATAGAGATATTTAATACTTTGCCAACATAGGTAGGATTCTGACATTGAATGTTGTAATGCTT
TAAATATCCAAAAGATTAATATGCTTTAAAT
>TRINITY_DN125985_c2_g1_i4 from sample A1 / Example unspliced isoform:TAAAGACGCAGCTTCCTTATGATTTTTATTCTCTGGATTACTGTAAACCAAAAACAATTGTCAACAGTGCTGAAAATCTTGGAGAAGTTCTTCGTGGAGATCGCATTGAGAACTCTCCTTATGTGGTAAGTATTATGGTTTCCGTTCTTGGCTCAGTTCTTCATTGGATTGGTCCTAAGGACTCGAGTTTTCTTTTCTTT
GCGGAATTTTTTGAAGgtataaaagtgtgcacgcagaagaaagtatggctagagctttagggtctgtgtagcattgtgtgatggattgttgacatcttgtcagaattggcattatgcgtacttgttagcaagtcgctggaactaccagcctaaacaactttttgtgaccaattatttaaccggtttcttctgcggcagTT
CCATATGAGAGAGGTGAAGCTCTGTAATTATGTATGCCGGATAAAGCTCGATGCAAAGTCCGCAAAGAACTTTAAGGAGAAAATAGATGATGAATACCGTGTTAACATGTAAGTTTTTTTCAGCTGTGAATTCCACTTTGCTTTGTGCCTATATCTTTTCTCCCAGGTGAATTCCTGAGGACTTTTTTCTCGGAAGTTCA
TTATTTATGTTTTAGTCTATGAGAAGACATATTTCTAGTATATATCTTGTTTCATATTTGGGATACACGTCCTCCTATGAAGATCACTTATCTAATTTTGATGGAAATAGGATTCTGGATAATCTACCTGTGGCTGTAGCCAGACAAAGAGCTGATGGAACCTCATATGAACATGGCTTCCGTGTTGGGTTTAAAGCAAG
CTATGCAGGGAGTTCAGAAGAGAGATACTTCATACACAACCATCTGTCTTTTGAGGTTAAGTTTCACAAAGATTCAGAGGCTGATTCTGCTCGGATTGTTGGATTTGAAGTCACACCATATAGCGTCAAGCATGAGCATGAGCAACCTTGGTCTGAGGATAATCCCCGTTTGACAACCTGCAACCCAAACACCAAGCACT
ACGTTTCACAAACTAATAGTCCGCAAGAAGTTGATGAGGGTAAAGATATTATATTTACCTATGATGTGGCATTCAAGGAAAGCCCTATCAAATGGGCTTCTCGATGGGATACATATCTTCTCATGACAGATGATCAGATCCACTGGTTCTCTATTATCAACTCATTAATGATTGTTTTGTTCCTTTCTGGGATGGTGGCA
ATGATTATGATGAGAACCTTGTATCGGGATATCTCAAACTACAATCAACTGGAGACACAGGATGAAGCCCAAGAAGAAACCGGATGGAAACTTGTCCATGGAGATGCATTCAGGCCCCCAAATAATGCAGGTCTGCTCTGTGTCTATGCAGGAACTGGAGTACAGTTTTTTGGGATGACACTTGTTACAATGATATTTGC
CATGCTTGGGTTTCTTTCACCATCCAACCGTGGTGGACTGATGACAGCTATGGTTCTCTTGTGGGTGTTCATGGGTTTGTTTGCTGGTTACTCTTCTGCTCGTCTGTATAAGATGTTTAAGGGCACAGAATGGAAAACAAACACACTGAAGACAGCTTTCACGTTCCCTGGAATTGTTTTTGGCATTTTCTTTGTTCTCA
ATGCACTGATTTGGGGTGAAAAGTCCTCTGGTGCATTACCATTTGGAACAATGTTTGCTTTGGTATTTTTATGGTTTGGGATATCTGTGCCTTTGGTCTTTGTTGGTAGTTACTTTGGCTACAAGAAACCTGCAATTGAAGATCCTGTTAAGACAAATAAAATCCCCAGGCAGATTCCAGAGCAGGCATGGTACATGCAG
CCAGTTTTCTCCGTACTCATTGGAGGCATATTGCCATTTGGTGCAGTTTTCATTGAATTATTCTTCATCTTAACGTCGATCTGGCTACATCAATTCTATTACATTTTTGGGTTCCTGTTCATTGTCTTTGTTATCCTTATTGTTACTTGTGCAGAGATCACTATTGTCCTTTGCTACTTTCAGTTGTGTAGTGAGGACTA
CCACTGGTGGTGGAGAGCTTATCTAACTTCAGGCTCGTCTGCACTGTACTTATTCCTGTATGCTACATTCTACTTCTTCACCAAGCTGGAGATCACAAAACTTGTGTCTGGTATTCTGTACTTTGGCTACATGACAATTATCTCATATGCTTTCTTTGTATTGACTGGTACAATCGGTTTCTATGCGTGCTTCTGGTTTG
TACGGACCATTTATGCTTCAGTGAAGATTGACTGAAGCTACATGTAGCCAAATTTTTCTCGGGGCTCAAATTTGCATTTGTTGAGCAGAATCAAGTAGTAGAATGGAAGACGTGCATTCTTTTCTCTGGTATTTAGGAAACTAGAACAGGAGTTTTCATGTGCTAGCAAGAGGAGATATCTTAGAGGATATCATGAACAT
CACGTATCAGTTGGTTACAAGGTACTATTTTTTTAAAGTTGCAGACTACCAAGTTATTCTGCATTGTACTCAAATGAGGTAGTTAGGACAGAATTTTTTCCTTGATGTACTGTTTGCAATGAATTATGGCTCATACTTATTATGGCTTCCATGCCTTTCAATCAGACTCTGGTGGCATACCATTTGCTATGCAAGATTTA
TGATATATGATATACAGATATTTTTGGTATTCAGTTGCTTCCAACATAAGCTTTCAGACTTGGACAATCATGCTATGCTTTATTCACCTATGTTATAACACTTACAGAGGTGTTGTTATGGTATAGAGATATTTAATACTTTGCCAACATAGGTAGGATTCTGACATTGAATGTTGTAATGCTTTAAATATCCAAAAGAT
TAATATGCTTTAAAT
Intron 12 GTAAGTGGTG ... CTTGGTACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 6.86 | 751.9 | 60.7 | 111.3 |
| A2 | 6.12 | 750.8 | 53.3 | 94.9 |
| A3 | 5.24 | 836.1 | 50 | 111.2 |
| A4 | 7.38 | 695.2 | 61.7 | 72.9 |
| A5 | 9.5 | 327 | 38.3 | 31.4 |
| A6 | 7.33 | 1033.9 | 91.3 | 128.1 |
| A7 | 7.1 | 1426 | 119.7 | 164.3 |
| A8 | 7.2 | 671.6 | 57 | 83 |
| A9 | 5.88 | 1239.9 | 84.3 | 147.6 |
| A10 | 5.88 | 1219 | 84 | 147.9 |
>TRINITY_DN118780_c0_g4_i4 from sample A2 / Example spliced isoformAAATTGGCGAAAAAATGTGTCAATATGATATATTCTGCTTTTAATTATTTGTTATTTATTATTTACATTGTAACCTTGTTGCAAGATACTCTTGCATGGGTATTTAAGTTTTATTTGATTGGTGCTCATTTACTTGTGGCTTTCCCACTGGTAGGCACTTTTGGGTGTCTATTCTATATCAATAAATTATACGACAGGGT
TAATTTACATGATGATGGTTTAATGGAAGCAGGATTCTGGATAATTTACCTGTAGCAGTAGCCAGACAGAGGGCTGAAGGAAGTCCTACTACTTATGAGCATGGCTTCCGGGTTGGGTTCAAAGCAAGCTACACAGGGAGTTCCGAAGAAGTATATTTCATCCACAATCATTTATCTTTTGATGTGATGTATCATAAGGA
TCTTGAAACTGATTCAGCACGCATAGTTGGATTTGAAGTTACACCATACAGTGTGAAGCATGAGTATGAACAGCCGTGGGATAAAGACAAACCCCATTTGACAACCTGTGATCCAAATACCAAGCGCACAGTTTCAAATTCTGAGACTCCCCAAGAAGTTGTGGAAGACAAAGAAATCATATTCACTTATGATGTTACAT
TCCGGGATAGCCCTGTGAAATGGGCATCTCGTTGGGATACCTACCTTCTTATGACAGATGATCAGATCCATTGGTTCTCTATCATAAACTCATTGATGATTGTTTTGTTTCTTTCTGGAATGGTTGCAATGATCATGATGCGAACATTGTACCGAGATATCTCAAAATACAACCAATTAGAAACACAGGATGAAGCTCAG
GAGGAAACAGGATGGAAGTTAGTCCATGGAGATGTGTTCAGGGCTCCAACAAATGCAAGCTTACTCTGTGTCTATGTGGGAACTGGAGTACAATTTTTTGCGATGACACTAGTGACAATGATATTTGCTATCCTTGGTTTCCTTTCTCCCTCGAACCGTGGAGGTTTGATGACAGCTATGCTGCTTTTATGGGTGTTTAT
GGGTTTGTTTGCGGGGTATGCCTCATCACGTCTATATAAGATGTTCAAGGGCACAGAATGGAGAAAGAACACGCTCAAGACAGCATTCTTGTTTCCAGGCATTGCGTTTTGCATTTTTTTCATTCTCAATGCACTGATATGGGGTGAGAAATCATCTGGTGCTGTTCCTTTTGGGACTATGTTTGCTTTGGTCCTTTTAT
GGTTTGGAATTTCTGTGCCATTGGTCTTTGTGGGCAGTTACTTTGGCTACAAGAAACCTGCAATTGAGGATCCAGTGAAAACCAATAAAATCCCCAGGCAGATTCCAGAACAAGCTTGGTATATGCGGCCCATTTTCTCAATACTAATTGGAGGCATTTTGCCGTTTGGCGCTGTGTTCATTGAACTGTTCTTCATCTTA
ACTTCAATATGGCTGCATCAGTTCTACTATATCTTTGGGTTCCTGTTCATTGTCTTTGTGATCCTCATTGTTACATGTGCAGAGATCACTATTGTTCTGTGCTACTTCCAATTGTGCAGTGAAGATTACAACTGGTGGTGGAGAGCTTATTTGACTGCAGGCTCCTCAGCATTTTACTTGTTTCTCTATGCTACATTCTA
TTTCTTCACCAAGTTGGAGATGACAAAGCTTGTTTCTGGAATTTTGTATTTTGGCTACATGACCATCATTTCATACTCATTTTTTGTTTTGACCGGTACAATAGGTTTCTATGCCTGCCTCTGGTTTGTGCGGACAATATACTCATCAGTGAAGATTGACTGAGGTTCTGCATGCGGTGGCCATTTTTCAGAGGGGCCCT
TTAAGTTATGCTTTAGGGGAATAGTGCTTGCTCATTTTATGTAGTTTAGAGTTTTTTGGGTAACATTACTGGAGACTTACCACTATCAATGTGCTGGTGTGGGAATTAACAGTGAAGATGTATGCTGGTGTATGTTCTTAGATTTAATCTCCTGCTACATTTTCTTGTTGAAATATGGAAACTCAATTCCCATTGTAATC
AATTCAATGCTATTTTTTATGCACTTGAGGCCAAAACCATTGAGATATTTATTGATTTTCAAGTTCCTTCAACAATTGGATAGAGTATGCATCATTCTGAGTAGGATAGGATGTATTTTATCTAAACAGTTTTTATTTTCTAGTTTGGTGAATGCTAAGGTTTTGTTCAATAAACAGTTCCTGTTGTTGCGAAGGGTTTG
TACAATAGACAGTTGTCATTGTTCACATTACTGTGGCTGGCATTAAGAATAATTGCTTTGTACATCTTAAAAATACTGGTCTTTGATGAATTTTAGTAGAATACATGCATTTTTGTAAGTGAACATTGCTCTCACGGTTTATACATTTCGCTTAGAATGATCCCTAGTGTTAGGGATCATTCTTTACCGTTTAGACTGTA
GTTCCCAACTGTATGTAAACATAGGACACTTTGAGAACACACTTCACTGCATAGAAAGCAATGCTCCA
>TRINITY_DN118780_c0_g4_i3 from sample A2 / Example unspliced isoform:GGTTCAAAGCAAGCTACACAGGGgtaagtggtgaatattattctcatgcaagggccaaggacaaacagaaacctatgtctgagattggtaacggtagtttgatttcctgtctttggaaattaatgaattagttttctcatgcaaggagcacatacgagtatttgcacctttgaatttagacatgaatctgatttgaaatc
tgtttactgtcttggtacagAGTTCCGAAGAAG
Intron 13 GTGAGTTAGG ... TTTCTTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 21.99 | 454 | 128 | 4 |
| A2 | 18.93 | 424 | 99 | 9 |
| A3 | 20.7 | 360 | 94 | 13 |
| A4 | 20.96 | 430 | 114 | 10 |
| A5 | 22.14 | 211 | 60 | 8 |
| A6 | 18.94 | 398 | 93 | 3 |
| A7 | 19.11 | 563 | 133 | 0 |
| A8 | 16.33 | 246 | 48 | 3 |
| A9 | 20.9 | 473 | 125 | 6 |
| A10 | 15.44 | 493 | 90 | 3 |
>TRINITY_DN107386_c0_g1_i1 from sample A4 / Example spliced isoformCTTCCTGCCTTAGCCTTGAGCAGTGCTATTTGTTTAAATATCTTTTGTATAAAAGTCTTAGAAAAGGACACCAGGAAGGACGTGACGGGGATGAAATGCGTACATTAGTTAAATGGGCAAGAAGCTCACAACGAAAACGATGGGGTCTTTTGTGATCCATGGCGTACAATCCCATTCGTCTTAGGCTTATTATGTATGGG
AAGAGAAACCCTGAATTCATTTAAACTGTTTCGAACATCGTTTCATCGGAAGTCATCGGTAAACGAGTCGTGGTTGCAGGATTCGATCTGGTGGATCCATAGATCCAATCAGATCTAAAAATGGCGCTCACTGGACTCATGCAGATCCTCGTATGGACCTCGGTGCTTCTTCTGCTCTTCTTCAAGGCCAACTGCTTTTA
TCTTCCAGGCGTCGCACCCCAAGATTTCAGTAAGGGGGATGTGCTACAAGTGAAAGTGAACAAGTTGACTTCCATAAAGACTCAGCTTCCTTATGATTACTATTCTCTGCAATACTGCCATCCGAGTAAGATTGTTGACACCTCTGAAAACCTTGGAGAAGTTCTTCGAGGTGATCGCATTGAAAACTCTCCTTATGTGT
TTGAAATGAGAGAAAGTAAGCTGTGCAATGTTGTTTGTAAGAGGAAGTTTGATGCAAAGGCAGCAAAGGACTTTAAGGAGAAGATTGATGATGAATATCTTGTCAATATGATTCTGGATAATTTACCTGTAGCAGTAGCCAGACAGAGGGCTGAAGGAAGTCCTACTACTTATGAGCATGGCTTCCGGGTTGGGTTCAAA
GCAAGCTACACAGGGAGTTCCGAAGAAGTATATTTCATCCACAATCATTTATCTTTTGATGTGATGTATCATAAGGATCTTGAAACTGATTCAGCACGCATAGTTGGATTTGAAGTTACACCATACAGTGTGAAGCATGAGTATGAACAGCCGTGGGATAAAGACAAACCCCATTTGACAACCTGTGATCCAAATACCAA
GCGCACAGTTTCAAATTCTGAGACTCCCCAAGAAGTTGTGGAAGACAAAGAAATCATATTCACTTATGATGTTACATTCCGGGATAGCCCTGTGAAATGGGCATCTCGTTGGGATACCTACCTTCTTATGACAGATGATCAGATCCATTGGTTCTCTATCATAAACTCATTGATGATTGTTTTGTTTCTTTCTGGAATGG
TTGCAATGATCATGATGCGAACATTGTACCGAGATATCTCAAAATACAACCAATTAGAAACACAGGATGAAGCTCAGGAGGAAACAGGATGGAAGTTAGTCCATGGAGATGTGTTCAGGGCTCCAACAAATGCAAGCTTACTCTGTGTCTATGTGGGAACTGGAGTACAATTTTTTGCGATGACACTAGTGACAATGATA
TTTGCTATCCTTGGTTTCCTTTCTCCCTCGAACCGTGGAGGTTTGATGACAGCTATGCTGCTTTTATGGGTGTTTATGGGTTTGTTTGCGGGGTATGCCTCATCACGTCTATATAAGATGTTCAAGGGCACAGAATGGAGAAAGAACACGCTCAAGACAGCATTCTTGTTTCCAGGCATTGCGTTTTGCATTTTTTTCAT
TCTCAATGCACTGATATGGGGTGAGAAATCATCTGGTGCTGTTCCTTTTGGGACTATGTTTGCTTTGGTCCTTTTATGGTTTGGAATTTCTGTGCCATTGGTCTTTGTGGGCAGTTACTTTGGCTACAAGAAACCTGCAATTGAGGATCCAGTGAAAACCAATAAAATCCCCAGGCAGATTCCAGAACAAGCTTGGTATA
TGCGGCCCATTTTCTCAATACTAATTGGAGGCATTTTGCCGTTTGGCGCTGTGTTCATTGAACTGTTCTTCATCTTAACTTCAATATGGCTGCATCAGTTCTACTATATCTTTGGGTTCCTGTTCATTGTCTTTGTGATCCTCATTGTTACATGTGCAGAGATCACTATTGTTCTGTGCTACTTCCAATTGTGCAGTGAA
GATTACAACTGGTGGTGGAGAGCTTATTTGACTGCAGGCTCCTCAGCATTTTACTTGTTTCTCTATGCTACATTCTATTTCTTCACCAAGTTGGAGATGACAAAGCTTGTTTCTGGAATTTTGTATTTTGGCTACATGACCATCATTTCATACTCATTTTTTGTTTTGACCGGTACAATAGGTTTCTATGCCTGCCTCTG
GTTTGTGCGGACAATATACTCATCAGTGAAGATTGACTGAGGTTCTGCATGCGGTGGCCATTTTTCAGAGGGGCCCTTTAAGTTATGCTTTAGGGGAATAGTGCTTGCTCATTTTATGTAGTTTAGAGTTTTTTGGGTAACATTACTGGAGACTTACCACTATCAATGTGCTGGTGTGGGAATTAACAGTGAAGATGTAT
GCTGGTGTATGTTTCTTCTTAGATTTAATCTCCTGCTACATTTTCTTGTTGAAATATGGAAACTCAATTCCCATTGTAATCAATTCAATGCTATTTTTTATGCACTTGAGGCCAAAACCATTGAGATATTTATTGATTTTCAAGTTCCTTCAACAATTGGATAGAGTATGCATCATTCTGAGTAGGATAGGATGTATTTT
ATCTAAACAGTTTTTATTTTCTAGTTTGGTG
>TRINITY_DN107386_c0_g1_i8 from sample A4 / Example unspliced isoform:CTTCCTGCCTTAGCCTTGAGCAGTGCTATTTGTTTAAATATCTTTTGTATAAAAGTCTTAGAAAAGGACACCAGGAAGGACGTGACGGGGATGAAATGCGTACATTAGTTAAATGGGCAAGAAGCTCACAACGAAAACGATGGGGTCTTTTGTGATCCATGGCGTACAATCCCATTCGTCTTAGGCTTATTATGTATGGG
AAGAGAAACCCTGAATTCATTTAAACTGTTTCGAACATCGTTTCATCGGAAGTCATCGGTAAACGAGTCGTGGTTGCAGGATTCGATCTGGTGGATCCATAGATCCAATCAGATCTAAAAATGGCGCTCACTGGACTCATGCAGATCCTCGTATGGACCTCGGTGCTTCTTCTGCTCTTCTTCAAGGCCAACTGCTTTTA
TCTTCCAGGCGTCGCACCCCAAGATTTCAGTAAGGGGGATGTGCTACAAGTGAAAGTGAACAAGTTGACTTCCATAAAGACTCAGCTTCCTTATGATTACTATTCTCTGCAATACTGCCATCCGAGTAAGATTGTTGACACCTCTGAAAACCTTGGAGAAGTTCTTCGAGGTGATCGCATTGAAAACTCTCCTTATGTGg
tgagttaggcatttctcattgtggttggtttggctattaaggtgattatggcactagccttgctatttttgtaatgagaaatacataagattctaacaggggtcctttcttgcagTTTGAAATGAGAGAAAGTAAGCTGTGCAATGTTGTTTGTAAGAGGAAGTTTGATGCAAAGGCAGCAAAGGACTTTAAGGAGAAGA
TTGATGATGAATATCTTGTCAATATGTGAGTGGCTTTGTCGTGTATCTGTGAATGTCAATGTCCTGAAGGAGAAAATTGGCGAAAAAATGTGTCAATATGATATATTCTGCTTTTAATTATTTGTTATTTATTATTTACATTGTAACCTTGTTGCAAGATACTCTTGCATGGGTATTTAAGTTTTATTTGATTGGTGCTC
ATTTACTTGTGGCTTTCCCACTGGTAGGCACTTTTGGGTGTCTATTCTATATCAATAAATTATACGACAGGGTTAATTTACATGATGATGGTTTAATGGAAGCAGGATTCTGGATAATTTACCTGTAGCAGTAGCCAGACAGAGGGCTGAAGGAAGTCCTACTACTTATGAGCATGGCTTCCGGGTTGGGTTCAAAGCAA
GCTACACAGGGGTAAGTGGTGAATATTATTCTCATGCAAGGGCCAAGGACAAACAGAAACCTATGTCTGAGATTGGTAACGGTAGTTTGATTTCCTGTCTTTGGAAATTAATGAATTAGTTTTCTCATGCAAGGAGCACATACGAGTATTTGCACCTTTGAATTTAGACATGAATCTGATTTGAAATCTGTTTACTGTCT
TGGTACAGAGTTCCGAAGAAGTATATTTCA
Intron 14 GTAAGTTTTT ... ATGGAAATAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 18.18 | 126 | 16 | 28 |
| A2 | 17.22 | 91.3 | 0 | 19 |
| A3 | 21.68 | 112 | 0 | 31 |
| A4 | 23.15 | 83 | 2 | 25 |
| A5 | 21.14 | 59.7 | 2 | 16 |
| A6 | 22.34 | 146 | 2 | 42 |
| A7 | 22.59 | 219.3 | 5 | 64 |
| A8 | 24.47 | 71 | 2 | 23 |
| A9 | 14.46 | 213 | 7 | 36 |
| A10 | 12.41 | 190.7 | 9 | 27 |
>TRINITY_DN125985_c2_g1_i1 from sample A1 / Example spliced isoformTAAAGACGCAGCTTCCTTATGATTTTTATTCTCTGGATTACTGTAAACCAAAAACAATTGTCAACAGTGCTGAAAATCTTGGAGAAGTTCTTCGTGGAGATCGCATTGAGAACTCTCCTTATGCGTTCCATATGAGAGAGGTGAAGCTCTGTAATTATGTATGCCGGATAAAGCTCGATGCAAAGTCCGCAAAGAACTTT
AAGGAGAAAATAGATGATGAATACCGTGTTAACATGATTCTGGATAATCTACCTGTGGCTGTAGCCAGACAAAGAGCTGATGGAACCTCATATGAACATGGCTTCCGTGTTGGGTTTAAAGCAAGCTATGCAGGGAGTTCAGAAGAGAGATACTTCATACACAACCATCTGTCTTTTGAGGTTAAGTTTCACAAAGATTC
AGAGGCTGATTCTGCTCGGATTGTTGGATTTGAAGTCACACCATATAGCGTCAAGCATGAGCATGAGCAACCTTGGTCTGAGGATAATCCCCGTTTGACAACCTGCAACCCAAACACCAAGCACTACGTTTCACAAACTAATAGTCCGCAAGAAGTTGATGAGGGTAAAGATATTATATTTACCTATGATGTGGCATTCA
AGGAAAGCCCTATCAAATGGGCTTCTCGATGGGATACATATCTTCTCATGACAGATGATCAGATCCACTGGTTCTCTATTATCAACTCATTAATGATTGTTTTGTTCCTTTCTGGGATGGTGGCAATGATTATGATGAGAACCTTGTATCGGGATATCTCAAACTACAATCAACTGGAGACACAGGATGAAGCCCAAGAA
GAAACCGGATGGAAACTTGTCCATGGAGATGCATTCAGGCCCCCAAATAATGCAGGTCTGCTCTGTGTCTATGCAGGAACTGGAGTACAGTTTTTTGGGATGACACTTGTTACAATGATATTTGCCATGCTTGGGTTTCTTTCACCATCCAACCGTGGTGGACTGATGACAGCTATGGTTCTCTTGTGGGTGTTCATGGG
TTTGTTTGCTGGTTACTCTTCTGCTCGTCTGTATAAGATGTTTAAGGGCACAGAATGGAAAACAAACACACTGAAGACAGCTTTCACGTTCCCTGGAATTGTTTTTGGCATTTTCTTTGTTCTCAATGCACTGATTTGGGGTGAAAAGTCCTCTGGTGCATTACCATTTGGAACAATGTTTGCTTTGGTATTTTTATGGT
TTGGGATATCTGTGCCTTTGGTCTTTGTTGGTAGTTACTTTGGCTACAAGAAACCTGCAATTGAAGATCCTGTTAAGACAAATAAAATCCCCAGGCAGATTCCAGAGCAGGCATGGTACATGCAGCCAGTTTTCTCCGTACTCATTGGAGGCATATTGCCATTTGGTGCAGTTTTCATTGAATTATTCTTCATCTTAACG
TCGATCTGGCTACATCAATTCTATTACATTTTTGGGTTCCTGTTCATTGTCTTTGTTATCCTTATTGTTACTTGTGCAGAGATCACTATTGTCCTTTGCTACTTTCAGTTGTGTAGTGAGGACTACCACTGGTGGTGGAGAGCTTATCTAACTTCAGGCTCGTCTGCACTGTACTTATTCCTGTATGCTACATTCTACTT
CTTCACCAAGCTGGAGATCACAAAACTTGTGTCTGGTATTCTGTACTTTGGCTACATGACAATTATCTCATATGCTTTCTTTGTATTGACTGGTACAATCGGTTTCTATGCGTGCTTCTGGTTTGTACGGACCATTTATGCTTCAGTGAAGATTGACTGAAGCTACATGTAGCCAAATTTTTCTCGGGGCTCAAATTTGC
ATTTGTTGAGCAGAATCAAGTAGTAGAATGGAAGACGTGCATTCTTTTCTCTGGTATTTAGGAAACTAGAACAGGAGTTTTCATGTGCTAGCAAGAGGAGATATCTTAGAGGATATCATGAACATCACGTATCAGTTGGTTACAAGACTCTGGTGGCATACCATTTGCTATGCAAGATTTATGATATATGATATACAGAT
ATTTTTGGTATTCAGTTGCTTCCAACATAAGCTTTCAGACTTGGACAATCATGCTATGCTTTATTCACCTATGTTATAACACTTACAGAGGTGTTGTTATGGTATAGAGATATTTAATACTTTGCCAACATAGGTAGGATTCTGACATTGAATGTTGTAATGCTTTAAATATCCAAAAGATTAATATGCTTTAAAT
>TRINITY_DN125985_c2_g1_i4 from sample A1 / Example unspliced isoform:TAAAGACGCAGCTTCCTTATGATTTTTATTCTCTGGATTACTGTAAACCAAAAACAATTGTCAACAGTGCTGAAAATCTTGGAGAAGTTCTTCGTGGAGATCGCATTGAGAACTCTCCTTATGTGGTAAGTATTATGGTTTCCGTTCTTGGCTCAGTTCTTCATTGGATTGGTCCTAAGGACTCGAGTTTTCTTTTCTTT
GCGGAATTTTTTGAAGGTATAAAAGTGTGCACGCAGAAGAAAGTATGGCTAGAGCTTTAGGGTCTGTGTAGCATTGTGTGATGGATTGTTGACATCTTGTCAGAATTGGCATTATGCGTACTTGTTAGCAAGTCGCTGGAACTACCAGCCTAAACAACTTTTTGTGACCAATTATTTAACCGGTTTCTTCTGCGGCAGTT
CCATATGAGAGAGGTGAAGCTCTGTAATTATGTATGCCGGATAAAGCTCGATGCAAAGTCCGCAAAGAACTTTAAGGAGAAAATAGATGATGAATACCGTGTTAACATgtaagtttttttcagctgtgaattccactttgctttgtgcctatatcttttctcccaggtgaattcctgaggacttttttctcggaagttca
ttatttatgttttagtctatgagaagacatatttctagtatatatcttgtttcatatttgggatacacgtcctcctatgaagatcacttatctaattttgatggaaatagGATTCTGGATAATCTACCTGTGGCTGTAGCCAGACAAAGAGCTGATGGAACCTCATATGAACATGGCTTCCGTGTTGGGTTTAAAGCAAG
CTATGCAGGGAGTTCAGAAGAGAGATACTTCATACACAACCATCTGTCTTTTGAGGTTAAGTTTCACAAAGATTCAGAGGCTGATTCTGCTCGGATTGTTGGATTTGAAGTCACACCATATAGCGTCAAGCATGAGCATGAGCAACCTTGGTCTGAGGATAATCCCCGTTTGACAACCTGCAACCCAAACACCAAGCACT
ACGTTTCACAAACTAATAGTCCGCAAGAAGTTGATGAGGGTAAAGATATTATATTTACCTATGATGTGGCATTCAAGGAAAGCCCTATCAAATGGGCTTCTCGATGGGATACATATCTTCTCATGACAGATGATCAGATCCACTGGTTCTCTATTATCAACTCATTAATGATTGTTTTGTTCCTTTCTGGGATGGTGGCA
ATGATTATGATGAGAACCTTGTATCGGGATATCTCAAACTACAATCAACTGGAGACACAGGATGAAGCCCAAGAAGAAACCGGATGGAAACTTGTCCATGGAGATGCATTCAGGCCCCCAAATAATGCAGGTCTGCTCTGTGTCTATGCAGGAACTGGAGTACAGTTTTTTGGGATGACACTTGTTACAATGATATTTGC
CATGCTTGGGTTTCTTTCACCATCCAACCGTGGTGGACTGATGACAGCTATGGTTCTCTTGTGGGTGTTCATGGGTTTGTTTGCTGGTTACTCTTCTGCTCGTCTGTATAAGATGTTTAAGGGCACAGAATGGAAAACAAACACACTGAAGACAGCTTTCACGTTCCCTGGAATTGTTTTTGGCATTTTCTTTGTTCTCA
ATGCACTGATTTGGGGTGAAAAGTCCTCTGGTGCATTACCATTTGGAACAATGTTTGCTTTGGTATTTTTATGGTTTGGGATATCTGTGCCTTTGGTCTTTGTTGGTAGTTACTTTGGCTACAAGAAACCTGCAATTGAAGATCCTGTTAAGACAAATAAAATCCCCAGGCAGATTCCAGAGCAGGCATGGTACATGCAG
CCAGTTTTCTCCGTACTCATTGGAGGCATATTGCCATTTGGTGCAGTTTTCATTGAATTATTCTTCATCTTAACGTCGATCTGGCTACATCAATTCTATTACATTTTTGGGTTCCTGTTCATTGTCTTTGTTATCCTTATTGTTACTTGTGCAGAGATCACTATTGTCCTTTGCTACTTTCAGTTGTGTAGTGAGGACTA
CCACTGGTGGTGGAGAGCTTATCTAACTTCAGGCTCGTCTGCACTGTACTTATTCCTGTATGCTACATTCTACTTCTTCACCAAGCTGGAGATCACAAAACTTGTGTCTGGTATTCTGTACTTTGGCTACATGACAATTATCTCATATGCTTTCTTTGTATTGACTGGTACAATCGGTTTCTATGCGTGCTTCTGGTTTG
TACGGACCATTTATGCTTCAGTGAAGATTGACTGAAGCTACATGTAGCCAAATTTTTCTCGGGGCTCAAATTTGCATTTGTTGAGCAGAATCAAGTAGTAGAATGGAAGACGTGCATTCTTTTCTCTGGTATTTAGGAAACTAGAACAGGAGTTTTCATGTGCTAGCAAGAGGAGATATCTTAGAGGATATCATGAACAT
CACGTATCAGTTGGTTACAAGGTACTATTTTTTTAAAGTTGCAGACTACCAAGTTATTCTGCATTGTACTCAAATGAGGTAGTTAGGACAGAATTTTTTCCTTGATGTACTGTTTGCAATGAATTATGGCTCATACTTATTATGGCTTCCATGCCTTTCAATCAGACTCTGGTGGCATACCATTTGCTATGCAAGATTTA
TGATATATGATATACAGATATTTTTGGTATTCAGTTGCTTCCAACATAAGCTTTCAGACTTGGACAATCATGCTATGCTTTATTCACCTATGTTATAACACTTACAGAGGTGTTGTTATGGTATAGAGATATTTAATACTTTGCCAACATAGGTAGGATTCTGACATTGAATGTTGTAATGCTTTAAATATCCAAAAGAT
TAATATGCTTTAAAT
Intron 15 GTGAGTGGCT ... ATGGAAGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 18.6 | 402 | 98 | 19 |
| A2 | 19.38 | 371 | 93.5 | 14 |
| A3 | 17.48 | 347 | 77 | 9 |
| A4 | 16.87 | 470 | 100 | 9 |
| A5 | 16.77 | 188 | 39.3 | 9 |
| A6 | 10.77 | 524 | 65.5 | 33 |
| A7 | 12.88 | 682 | 105.5 | 39 |
| A8 | 12.85 | 309 | 47.5 | 8 |
| A9 | 11.3 | 535 | 70.3 | 13 |
| A10 | 12.55 | 534 | 80 | 22 |
>TRINITY_DN111105_c0_g3_i3 from sample A3 / Example spliced isoformTATCAAATTATTACCAATGGCCTTAGCGCTTCCCTTCCTGCCTTAGCCTTGAGCAGTGCTATTTGTTTAAATATCTTTTGTATAAAAGTCTTAGAAAAGGACACCAGGAAGGACGTGACGGGGATGAAATGCGTACATTAGTTAAATGGGCAAGAAGCTCACAACGAAAACGATGGGGTCTTTTGTGATCCATGGCGTAC
AATCCCATTCGTCTTAGGCTTATTATGTATGGGAAGAGAAACCCTGAATTCATTTAAACTGTTTCGAACATCGTTTCATCGGAAGTCATCGGTAAACGAGTCGTGGTTGCAGGATTCGATCTGGTGGATCCATAGATCCAATCAGATCTAAAAATGGCGCTCACTGGACTCATGCAGATCCTCGTATGGACCTCGGTGCT
TCTTCTGCTCTTCTTCAAGGCCAACTGCTTTTATCTTCCAGGCGTCGCACCCCAAGATTTCAGTAAGGGGGATGTGCTACAAGTGAAAGTGAACAAGTTGACTTCCATAAAGACTCAGCTTCCTTATGATTACTATTCTCTGCAATACTGCCATCCGAGTAAGATTGTTGACACCTCTGAAAACCTTGGAGAAGTTCTTC
GAGGTGATCGCATTGAAAACTCTCCTTATGTGTTTGAAATGAGAGAAAGTAAGCTGTGCAATGTTGTTTGTAAGAGGAAGTTTGATGCAAAGGCAGCAAAGGACTTTAAGGAGAAGATTGATGATGAATATCTTGTCAATATGATTCTGGATAATTTACCTGTAGCAGTAGCCAGACAGAGGGCTGAAGGAAGTCCTACT
ACTTATGAGCATGGCTTCCGGGTTGGGTTCAAAGCAAGCTACACAGGGAGTTCCGAAGAAGTATATTTCATCCACAATCATTTATCTTTTGATGTGATGTATCATAAGGATCTTGAAACTGATTCAGCACGCATAGTTGGATTTGAAGTTACACCATACAGTGTGAAGCATGAGTATGAACAGCCGTGGGATAAAGACAA
ACCCCATTTGACAACCTGTGATCCAAATACCAAGCGCACAGTTTCAAATTCTGAGACTCCCCAAGAAGTTGTGGAAGACAAAGAAATCATATTCACTTATGATGTTACATTCCGGGATAGCCCTGTGAAATGGGCATCTCGTTGGGATACCTACCTTCTTATGACAGATGATCAGATCCATTGGTTCTCTATCATAAACT
CATTGATGATTGTTTTGTTTCTTTCTGGAATGGTTGCAATGATCATGATGCGAACATTGTACCGAGATATCTCAAAATACAACCAATTAGAAACACAGGATGAAGCTCAGGAGGAAACAGGATGGAAGTTAGTCCATGGAGATGTGTTCAGGGCTCCAACAAATGCAAGCTTACTCTGTGTCTATGTGGGAACTGGAGTA
CAATTTTTTGCAATGACACTAGTGACAATGATATTTGCTATCCTTGGTTTCCTTTCTCCCTCGAACCGTGGAGGTTTGATGACAGCTATGCTGCTTTTATGGGTGTTTATGGGTTTGTTTGCGGGGTATGCCTCATCACGTCTATATAAGATGTTCAAGGGCACAGAATGGAGAAAGAACACGCTCAAGACAGCATTCTT
GTTTCCAGGCATTGCGTTTTGCATTTTTTTCATTCTCAATGCACTGATATGGGGTGAGAAATCATCTGGTGCTGTTCCTTTTGGGACTATGTTTGCTTTGGTCCTTTTATGGTTTGGAATTTCTGTGCCATTGGTCTTTGTGGGCAGTTACTTTGGCTACAAGAAACCTGCAATTGAGGATCCAGTGAAAACCAATAAAA
TCCCCAGGCAGATTCCAGAACAAGCTTGGTATATGCGGCCCATTTTCTCAATACTAATTGGAGGCATTTTGCCGTTTGGCGCTGTGTTCATTGAACTGTTCTTCATCTTAACTTCAATATGGCTGCATCAGTTCTACTATATCTTTGGGTTCCTGTTCATTGTCTTTGTGATCCTCATTGTTACATGTGCAGAGATCACT
ATTGTTCTGTGCTACTTCCAATTGTGCAGTGAAGATTACAACTGGTGGTGGAGAGCTTATTTGACTGCAGGCTCCTCAGCATTTTACTTGTTTCTCTATGCTACATTCTATTTCTTCACCAAGTTGGAGATGACAAAGCTTGTTTCTGGAATTTTGTATTTTGGCTACATGACCATCATTTCATACTCATTTTTTGTTTT
GACCGGTACAATAGGTTTCTATGCCTGCCTCTGGTTTGTGCGGACAATATACTCATCAGTGAAGATTGACTGAGGTTCTGCATGCGGTGGCCATTTTTCAGAGGGGCCCTTTAAGTTATGCTTTAGGGGAATAGTGCTTGCTCATTTTATGTAGTTTAGAGTTTTTTGGGTAACATTACTGGAGACTTACCACTATCAAT
GTGCTGGTGTGGGAATTAACAGTGAAGATGTATGCTGGTGTATGTTTCTTCTTAGATTTAATCTCCTGCTACATTTTCTTGTTGAAATATGGAAACTCAATTCCCATTGTAATCAATTCAATGCTATTTTTTATGCACTTGAGGCCAAAACCATTGAGATATTTATTGATTTTCAAGTTCCTTCAACAATTGGATAGAGT
ATGCATCATTCTGAGTAGGATAGGATGTATTTTATCTAAACAGTTTTTATTTTCTAGTTTG
>TRINITY_DN111105_c0_g3_i4 from sample A3 / Example unspliced isoform:TATCAAATTATTACCAATGGCCTTAGCGCTTCCCTTCCTGCCTTAGCCTTGAGCAGTGCTATTTGTTTAAATATCTTTTGTATAAAAGTCTTAGAAAAGGACACCAGGAAGGACGTGACGGGGATGAAATGCGTACATTAGTTAAATGGGCAAGAAGCTCACAACGAAAACGATGGGGTCTTTTGTGATCCATGGCGTAC
AATCCCATTCGTCTTAGGCTTATTATGTATGGGAAGAGAAACCCTGAATTCATTTAAACTGTTTCGAACATCGTTTCATCGGAAGTCATCGGTAAACGAGTCGTGGTTGCAGGATTCGATCTGGTGGATCCATAGATCCAATCAGATCTAAAAATGGCGCTCACTGGACTCATGCAGATCCTCGTATGGACCTCGGTGCT
TCTTCTGCTCTTCTTCAAGGCCAACTGCTTTTATCTTCCAGGCGTCGCACCCCAAGATTTCAGTAAGGGGGATGTGCTACAAGTGAAAGTGAACAAGTTGACTTCCATAAAGACTCAGCTTCCTTATGATTACTATTCTCTGCAATACTGCCATCCGAGTAAGATTGTTGACACCTCTGAAAACCTTGGAGAAGTTCTTC
GAGGTGATCGCATTGAAAACTCTCCTTATGTGTTTGAAATGAGAGAAAGTAAGCTGTGCAATGTTGTTTGTAAGAGGAAGTTTGATGCAAAGGCAGCAAAGGACTTTAAGGAGAAGATTGATGATGAATATCTTGTCAATATgtgagtggctttgtcgtgtatctgtgaatgtcaatgtcctgaaggagaaaattggcga
aaaaatgtgtcaatatgatatattctgcttttaattatttgttatttattatttacattgtaaccttgttgcaagatactcttgcatgggtatttaagttttatttgattggtgctcatttacttgtggctttcccactggtaggcacttttgggtgtctattctatatcaataaattatacgacagggttaatttacat
gatgatggtttaatggaagcagGATTCTGGATAATTTACCTGTAGCAGTAGCCAGACAGAGGGCTGAAGGAAGTCCTACTACTTATGAGCATGGCTTCCGGGTTGGGTTCAAAGCAAGCTACACAGGGGTAAGTGGTGAATATTATTCTCATGCAAGGGCCAAGGACAAACAGAAACCTATGTCTGAGATTGGTAACGGT
AGTTTGATTTCCTGTCTTTGGAAATTAATGAATTAGTTTTCTCATGCAAGGAGCACATACGAGTATTTGCACCTTTGAATTTAGACATGAATCTGATTTGAAATCTGTTTACTGTCTTGGTACAGAGTTCCGAAGAAGTATATTTCATCCACAATCATTTATCTTTTGATGTGATGTATCATAAGGATCTTGAAACTGAT
TCAGCACGCATAGTTGGATTTGAAGTTACACCATACAGTGTGAAGCATGAGTATGAACAGCCGTGGGATAAAGACAAACCCCATTTGACAACCTGTGATCCAAATACCAAGCGCACAGTTTCAAATTCTGAGACTCCCCAAGAAGTTGTGGAAGACAAAGAAATCATATTCACTTATGATGTTACATTCCGGGATAGCCC
TGTGAAATGGGCATCTCGTTGGGATACCTACCTTCTTATGACAGATGATCAGATCCATTGGTTCTCTATCATAAACTCATTGATGATTGTTTTGTTTCTTTCTGGAATGGTTGCAATGATCATGATGCGAACATTGTACCGAGATATCTCAAAATACAACCAATTAGAAACACAGGATGAAGCTCAGGAGGAAACAGGAT
GGAAGTTAGTCCATGGAGATGTGTTCAGGGCTCCAACAAATGCAAGCTTACTCTGTGTCTATGTGGGAACTGGAGTACAATTTTTTGCAATGACACTAGTGACAATGATATTTGCTATCCTTGGTTTCCTTTCTCCCTCGAACCGTGGAGGTTTGATGACAGCTATGCTGCTTTTATGGGTGTTTATGGGTTTGTTTGCG
GGGTATGCCTCATCACGTCTATATAAGATGTTCAAGGGCACAGAATGGAGAAAGAACACGCTCAAGACAGCATTCTTGTTTCCAGGCATTGCGTTTTGCATTTTTTTCATTCTCAATGCACTGATATGGGGTGAGAAATCATCTGGTGCTGTTCCTTTTGGGACTATGTTTGCTTTGGTCCTTTTATGGTTTGGAATTTC
TGTGCCATTGGTCTTTGTGGGCAGTTACTTTGGCTACAAGAAACCTGCAATTGAGGATCCAGTGAAAACCAATAAAATCCCCAGGCAGATTCCAGAACAAGCTTGGTATATGCGGCCCATTTTCTCAATACTAATTGGAGGCATTTTGCCGTTTGGCGCTGTGTTCATTGAACTGTTCTTCATCTTAACTTCAATATGGC
TGCATCAGTTCTACTATATCTTTGGGTTCCTGTTCATTGTCTTTGTGATCCTCATTGTTACATGTGCAGAGATCACTATTGTTCTGTGCTACTTCCAATTGTGCAGTGAAGATTACAACTGGTGGTGGAGAGCTTATTTGACTGCAGGCTCCTCAGCATTTTACTTGTTTCTCTATGCTACATTCTATTTCTTCACCAAG
TTGGAGATGACAAAGCTTGTTTCTGGAATTTTGTATTTTGGCTACATGACCATCATTTCATACTCATTTTTTGTTTTGACCGGTACAATAGGTTTCTATGCCTGCCTCTGGTTTGTGCGGACAATATACTCATCAGTGAAGATTGACTGAGGTTCTGCATGCGGTGGCCATTTTTCAGAGGGGCCCTTTAAGTTATGCTT
TAGGGGAATAGTGCTTGCTCATTTTATGTAGTTTAGAGTTTTTTGGGTAACATTACTGGAGACTTACCACTATCAATGTGCTGGTGTGGGAATTAACAGTGAAGATGTATGCTGGTGTATGTTTCTTCTTAGATTTAATCTCCTGCTACATTTTCTTGTTGAAATATGGAAACTCAATTCCCATTGTAATCAATTCAATG
CTATTTTTTATGCACTTGAGGCCAAAACCATTGAGATATTTATTGATTTTCAAGTTCCTTCAACAATTGGATAGAGTATGCATCATTCTGAGTAGGATAGGATGTATTTTATCTAAACAGTTTTTATTTTCTAGTTTG
Intron 16 GTACGTATCC ... GTATCACAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 50 | 6 | 0 | 6 |
| A2 | 74.29 | 9 | 0 | 26 |
| A3 | 41.67 | 7 | 1 | 5 |
| A4 | 61.54 | 5 | 0 | 8 |
| A5 | 42.86 | 4 | 0 | 3 |
| A6 | 54.55 | 40 | 5 | 48 |
| A7 | 45 | 33 | 3 | 27 |
| A8 | 50.79 | 31 | 7 | 32 |
| A9 | 55.56 | 28 | 2 | 35 |
| A10 | 48.72 | 20 | 2 | 19 |
>TRINITY_DN41856_c0_g2_i8 from sample A8 / Example spliced isoformCACGTTCTTTACCAAGGTGGGTTTTGTTCGAATTCGAACTTGTAATCACGATCACAAGTCCATTGCTCGTTAATCTGACCGTATGAAGGCTTCATCGAAGCCGACTTCATTTGCGTAAACTTGGGGTTTTATTCAATGGAGGCGTTCAAAATCTATAGGAATCTCTTGAGGGCAGTGCAGACACACATTGATAATGCCAA
TAAAACACACTTCCGAGAATATATCATGGCGGAGTTCAGAAAGAATAAAGATCCTGAGGACTCTGCCTTTGTTCAACAGAAGCTGCAGCTTGCACATAATTATGCTCTACAGCTTAGTAGTATTCACCATCATAAGGATCTCCTATTATCTTACAATATTGCCATAGATCGGGAAGCAGAAAAGAAGTTGACACTGGAAA
GATCAGCTGCAAGTGTTGGACTTAAACTTCCAAAACCTTATGATGATTAATATCACAAAGCCTCATGTAGATGCATGCTCATAAAACTTTGATCTACAGGGAGATGAGCTTTGAATGGTGGATGGAATTCATGGATACCTTTTAAATATGCTGACATGAAACAATTAATGCAGAATAGAGATATGGTTGCTTTGAAACCA
TATCAAATGTGCATATATGTTTAGATTGTTCTCTTGCACTGTAATCCACATGCTGTAGCCATGACAAGCTTGTCTATGTCCTTTTATTTACTAGTTTGTTTAGAGGAAAGAACCCATCAATTTTTATGGACCAAAGGTCACAGACATTATATTCTACATCACCAAATAATGAAAATCACACATCTCATCCATCTGTTATT
CCTTATTCCCAACTTATAGATGAGTCTTCTTACATCCTCCCCACTCAACTATTTTACACTAAAGTTTCTGCTACTTTCAAACCTCATTAATGCCTTCCCAAAAGGGGCTAGCTTGCAGGCTATACACTGTCAGGTGTGAATTTGTTGAATCACTTGAAGCTATTGTTTGAATTCAATTTTCATTTTCAGTCCAATGAAAA
TAAGGAAACTGCAAATTTCATTGAGTAGATTATTGCAGAAGGCTTCCTCTTCAACCTAAACCGTATGACCTCGTCCTTACACCAAAGTGTCGTATTTTTTTATCTGTTTTTTGAATTTTCTGAAGATAAATATTGAAGTACTAGTAAACATTTC
>TRINITY_DN41856_c0_g2_i5 from sample A8 / Example unspliced isoform:CACGTTCTTTACCAAGGTGGGTTTTGTTCGAATTCGAACTTGTAATCACGATCACAAGTCCATTGCTCGTTAATCTGACCGTATGAAGGCTTCATCGAAGCCGACTTCATTTGCgtacgtatcccatttctcattgagttcatcccagctatttttaactcggggttcgtgcagattcaccttaataatgattgcagaga
taaatttcatagccgcttagaattttattttcgcaccacaggcagaagagaaccgatgatagatcgcccgactgtgtttaattacctcagcaagactgtaattttgtggtttccctagaatttcagaaattccatgaaaacccccgtcattcccaagcgaggttactattatgtgtagttacaactttgggtggtttctc
aaaatgtgaaaatagaaacttagtcgaaactagttcctaaaattgtgaagctatagacattcccgaggaaaaggtcaaatactgagtggagcttgttacactgagaatttaaatacttgctatacacaatgactagaatatggagaagttgaaacaggacaagctgctagcaaccaaagattgcaggattctacaaggta
tcacaagGTAAACTTGGGGTTTTATTCAATGGAGGCGTTCAAAATCTATAGGAATCTCTTGAGGGCAGTGCAGACACACATTGATAATGCCAATAAAACACACTTCCGAGAATATATCATGGCGGAGTTCAGAAAGAATAAAGATCCTGAGGACTCTGCCTTTGTTCAACAGAAGCTGCAGCTTGCACATAATTATGCTC
TACAGCTTAGTAGTATTCACCATCATAAGGATCTCCTATTATCTTACAATATTGCCATAGATCGGGAAGCAGAAAAGAAGTTGACACTGGAAAGATCAGCTGCAAGTGTTGGACTTAAACTTCCAAAACCTTATGATGATTAATATCACAAAGCCTCATGTAGATGCATGCTCATAAAACTTTGATCTACAGGGAGATGA
GCTTTGAATGGTGGATGGAATTCATGGATACCTTTTAAATATGCTGACATGAAACAATTAATGCAGAATAGAGATATGGTTGCTTTGAAACCATATCAAATGTGCATATATGTTTAGATTGTTCTCTTGCACTGTAATCCACATGCTGTAGCCATGACAAGCTTGTCTATGTCCTTTTATTTACTAGTTTGTTTAGAGGA
AAGAACCCATCAATTTTTATGGACCAAAGGTCACAGACATTATATTCTACATCACCAAATAATGAAAATCACACATCTCATCCATCTGTTATTCCTTATTCCCAACTTATAGATGAGTCTTCTTACATCCTCCCCACTCAACTATTTTACACTAAAGTTTCTGCTACTTTCAAACCTCATTAATGCCTTCCCAAAAGGGG
CTAGCTTGCAGGCTATACACTGTCAGGTGTGAATTTGTTGAATCACTTGAAGCTATTGTTTGAATTCAATTTTCATTTTCAGTCCAATGAAAATAAGGAAACTGCAAATTTCATTGAGTAGATTATTGCAGAAGGCTTCCTCTTCAACCTAAACCGTATGACCTCGTCCTTACACCAAAGTGTCGTATTTTTTTATCTGT
TTTTTGAATTTTCTGAAGATAAATATTGAAGTACTAGTAAACATTTC
Intron 17 GCAGAAGAGA ... CCCAAGCGAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 70.73 | 6 | 9 | 20 |
| A2 | 64.71 | 9 | 14 | 19 |
| A3 | 76.67 | 7 | 16 | 30 |
| A4 | 74.36 | 5 | 11 | 18 |
| A5 | 80 | 4 | 11 | 21 |
| A6 | 73.77 | 40 | 68 | 157 |
| A7 | 64.89 | 33 | 41 | 81 |
| A8 | 70.62 | 31 | 46 | 103 |
| A9 | 72.68 | 28 | 42 | 107 |
| A10 | 66.67 | 20 | 26 | 54 |
>TRINITY_DN41856_c0_g2_i8 from sample A8 / Example spliced isoformCACGTTCTTTACCAAGGTGGGTTTTGTTCGAATTCGAACTTGTAATCACGATCACAAGTCCATTGCTCGTTAATCTGACCGTATGAAGGCTTCATCGAAGCCGACTTCATTTGCGTAAACTTGGGGTTTTATTCAATGGAGGCGTTCAAAATCTATAGGAATCTCTTGAGGGCAGTGCAGACACACATTGATAATGCCAA
TAAAACACACTTCCGAGAATATATCATGGCGGAGTTCAGAAAGAATAAAGATCCTGAGGACTCTGCCTTTGTTCAACAGAAGCTGCAGCTTGCACATAATTATGCTCTACAGCTTAGTAGTATTCACCATCATAAGGATCTCCTATTATCTTACAATATTGCCATAGATCGGGAAGCAGAAAAGAAGTTGACACTGGAAA
GATCAGCTGCAAGTGTTGGACTTAAACTTCCAAAACCTTATGATGATTAATATCACAAAGCCTCATGTAGATGCATGCTCATAAAACTTTGATCTACAGGGAGATGAGCTTTGAATGGTGGATGGAATTCATGGATACCTTTTAAATATGCTGACATGAAACAATTAATGCAGAATAGAGATATGGTTGCTTTGAAACCA
TATCAAATGTGCATATATGTTTAGATTGTTCTCTTGCACTGTAATCCACATGCTGTAGCCATGACAAGCTTGTCTATGTCCTTTTATTTACTAGTTTGTTTAGAGGAAAGAACCCATCAATTTTTATGGACCAAAGGTCACAGACATTATATTCTACATCACCAAATAATGAAAATCACACATCTCATCCATCTGTTATT
CCTTATTCCCAACTTATAGATGAGTCTTCTTACATCCTCCCCACTCAACTATTTTACACTAAAGTTTCTGCTACTTTCAAACCTCATTAATGCCTTCCCAAAAGGGGCTAGCTTGCAGGCTATACACTGTCAGGTGTGAATTTGTTGAATCACTTGAAGCTATTGTTTGAATTCAATTTTCATTTTCAGTCCAATGAAAA
TAAGGAAACTGCAAATTTCATTGAGTAGATTATTGCAGAAGGCTTCCTCTTCAACCTAAACCGTATGACCTCGTCCTTACACCAAAGTGTCGTATTTTTTTATCTGTTTTTTGAATTTTCTGAAGATAAATATTGAAGTACTAGTAAACATTTC
>TRINITY_DN41856_c0_g2_i3 from sample A8 / Example unspliced isoform:CACGTTCTTTACCAAGGTGGGTTTTGTTCGAATTCGAACTTGTAATCACGATCACAAGTCCATTGCTCGTTAATCTGACCGTATGAAGGCTTCATCGAAGCCGACTTCATTTGCgcagaagagaaccgatgatagatcgcccgactgtgtttaattacctcagcaagactgtaattttgtggtttccctagaatttcaga
aattccatgaaaacccccgtcattcccaagcgagGTAAACTTGGGGTTTTATTCAATGGAGGCGTTCAAAATCTATAGGAATCTCTTGAGGGCAGTGCAGACACACATTGATAATGCCAATAAAACACACTTCCGAGAATATATCATGGCGGAGTTCAGAAAGAATAAAGATCCTGAGGACTCTGCCTTTGTTCAACAGA
AGCTGCAGCTTGCACATAATTATGCTCTACAGCTTAGTAGTATTCACCATCATAAGGATCTCCTATTATCTTACAATATTGCCATAGATCGGGAAGCAGAAAAGAAGTTGACACTGGAAAGATCAGCTGCAAGTGTTGGACTTAAACTTCCAAAACCTTATGATGATTAATATCACAAAGCCTCATGTAGATGCATGCTC
ATAAAACTTTGATCTACAGGGAGATGAGCTTTGAATGGTGGATGGAATTCATGGATACCTTTTAAATATGCTGACATGAAACAATTAATGCAGAATAGAGATATGGTTGCTTTGAAACCATATCAAATGTGCATATATGTTTAGATTGTTCTCTTGCACTGTAATCCACATGCTGTAGCCATGACAAGCTTGTCTATGTC
CTTTTATTTACTAGTTTGTTTAGAGGAAAGAACCCATCAATTTTTATGGACCAAAGGTCACAGACATTATATTCTACATCACCAAATAATGAAAATCACACATCTCATCCATCTGTTATTCCTTATTCCCAACTTATAGATGAGTCTTCTTACATCCTCCCCACTCAACTATTTTACACTAAAGTTTCTGCTACTTTCAA
ACCTCATTAATGCCTTCCCAAAAGGGGCTAGCTTGCAGGCTATACACTGTCAGGTGTGAATTTGTTGAATCACTTGAAGCTATTGTTTGAATTCAATTTTCATTTTCAGTCCAATGAAAATAAGGAAACTGCAAATTTCATTGAGTAGATTATTGCAGAAGGCTTCCTCTTCAACCTAAACCGTATGACCTCGTCCTTAC
ACCAAAGTGTCGTATTTTTTTATCTGTTTTTTGAATTTTCTGAAGATAAATATTGAAGTACTAGTAAACATTTC
Intron 18 GCAGAAGAGA ... GTATCACAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 55.56 | 6 | 9 | 6 |
| A2 | 68.97 | 9 | 14 | 26 |
| A3 | 60 | 7 | 16 | 5 |
| A4 | 65.52 | 5 | 11 | 8 |
| A5 | 63.64 | 4 | 11 | 3 |
| A6 | 59.18 | 40 | 68 | 48 |
| A7 | 50.75 | 33 | 41 | 27 |
| A8 | 55.71 | 31 | 46 | 32 |
| A9 | 57.58 | 28 | 41 | 35 |
| A10 | 52.94 | 20 | 26 | 19 |
>TRINITY_DN41856_c0_g2_i8 from sample A8 / Example spliced isoformCACGTTCTTTACCAAGGTGGGTTTTGTTCGAATTCGAACTTGTAATCACGATCACAAGTCCATTGCTCGTTAATCTGACCGTATGAAGGCTTCATCGAAGCCGACTTCATTTGCGTAAACTTGGGGTTTTATTCAATGGAGGCGTTCAAAATCTATAGGAATCTCTTGAGGGCAGTGCAGACACACATTGATAATGCCAA
TAAAACACACTTCCGAGAATATATCATGGCGGAGTTCAGAAAGAATAAAGATCCTGAGGACTCTGCCTTTGTTCAACAGAAGCTGCAGCTTGCACATAATTATGCTCTACAGCTTAGTAGTATTCACCATCATAAGGATCTCCTATTATCTTACAATATTGCCATAGATCGGGAAGCAGAAAAGAAGTTGACACTGGAAA
GATCAGCTGCAAGTGTTGGACTTAAACTTCCAAAACCTTATGATGATTAATATCACAAAGCCTCATGTAGATGCATGCTCATAAAACTTTGATCTACAGGGAGATGAGCTTTGAATGGTGGATGGAATTCATGGATACCTTTTAAATATGCTGACATGAAACAATTAATGCAGAATAGAGATATGGTTGCTTTGAAACCA
TATCAAATGTGCATATATGTTTAGATTGTTCTCTTGCACTGTAATCCACATGCTGTAGCCATGACAAGCTTGTCTATGTCCTTTTATTTACTAGTTTGTTTAGAGGAAAGAACCCATCAATTTTTATGGACCAAAGGTCACAGACATTATATTCTACATCACCAAATAATGAAAATCACACATCTCATCCATCTGTTATT
CCTTATTCCCAACTTATAGATGAGTCTTCTTACATCCTCCCCACTCAACTATTTTACACTAAAGTTTCTGCTACTTTCAAACCTCATTAATGCCTTCCCAAAAGGGGCTAGCTTGCAGGCTATACACTGTCAGGTGTGAATTTGTTGAATCACTTGAAGCTATTGTTTGAATTCAATTTTCATTTTCAGTCCAATGAAAA
TAAGGAAACTGCAAATTTCATTGAGTAGATTATTGCAGAAGGCTTCCTCTTCAACCTAAACCGTATGACCTCGTCCTTACACCAAAGTGTCGTATTTTTTTATCTGTTTTTTGAATTTTCTGAAGATAAATATTGAAGTACTAGTAAACATTTC
>TRINITY_DN41856_c0_g2_i9 from sample A8 / Example unspliced isoform:CACGTTCTTTACCAAGGTGGGTTTTGTTCGAATTCGAACTTGTAATCACGATCACAAGTCCATTGCTCGTTAATCTGACCGTATGAAGGCTTCATCGAAGCCGACTTCATTTGCgcagaagagaaccgatgatagatcgcccgactgtgtttaattacctcagcaagactgtaattttgtggtttccctagaatttcaga
aattccatgaaaacccccgtcattcccaagcgaggttactattatgtgtagttacaactttgggtggtttctcaaaatgtgaaaatagaaacttagtcgaaactagttcctaaaattgtgaagctatagacattcccgaggaaaaggtcaaatactgagtggagcttgttacactgagaatttaaatacttgctatacac
aatgactagaatatggagaagttgaaacaggacaagctgctagcaaccaaagattgcaggattctacaaggtatcacaagGTAAACTTGGGGTTTTATTCAATGGAGGCGTTCAAAATCTATAGGAATCTCTTGAGGGCAGTGCAGACACACATTGATAATGCCAATAAAACACACTTCCGAGAATATATCATGGCGGAG
TTCAGAAAGAATAAAGATCCTGAGGACTCTGCCTTTGTTCAACAGAAGCTGCAGCTTGCACATAATTATGCTCTACAGCTTAGTAGTATTCACCATCATAAGGATCTCCTATTATCTTACAATATTGCCATAGATCGGGAAGCAGAAAAGAAGTTGACACTGGAAAGATCAGCTGCAAGTGTTGGACTTAAACTTCCAAA
ACCTTATGATGATTAATATCACAAAGCCTCATGTAGATGCATGCTCATAAAACTTTGATCTACAGGGAGATGAGCTTTGAATGGTGGATGGAATTCATGGATACCTTTTAAATATGCTGACATGAAACAATTAATGCAGAATAGAGATATGGTTGCTTTGAAACCATATCAAATGTGCATATATGTTTAGATTGTTCTCT
TGCACTGTAATCCACATGCTGTAGCCATGACAAGCTTGTCTATGTCCTTTTATTTACTAGTTTGTTTAGAGGAAAGAACCCATCAATTTTTATGGACCAAAGGTCACAGACATTATATTCTACATCACCAAATAATGAAAATCACACATCTCATCCATCTGTTATTCCTTATTCCCAACTTATAGATGAGTCTTCTTACA
TCCTCCCCACTCAACTATTTTACACTAAAGTTTCTGCTACTTTCAAACCTCATTAATGCCTTCCCAAAAGGGGCTAGCTTGCAGGCTATACACTGTCAGGTGTGAATTTGTTGAATCACTTGAAGCTATTGTTTGAATTCAATTTTCATTTTCAGTCCAATGAAAATAAGGAAACTGCAAATTTCATTGAGTAGATTATT
GCAGAAGGCTTCCTCTTCAACCTAAACCGTATGACCTCGTCCTTACACCAAAGTGTCGTATTTTTTTATCTGTTTTTTGAATTTTCTGAAGATAAATATTGAAGTACTAGTAAACATTTC