sp|F4IHJ0|SFH8_ARATH ----> Phosphatidylinositol/phosphatidylcholine transfer protein SFH8
Intron 1 GTAGGTCTAA ... TTTGACTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 13.6 | 197 | 31 | 1 |
| A2 | 15.28 | 122 | 22 | 0 |
| A3 | 11.98 | 147 | 20 | 0 |
| A4 | 13.91 | 130 | 21 | 0 |
| A5 | 20.29 | 55 | 14 | 1 |
| A6 | 15.56 | 76 | 14 | 0 |
| A7 | 16.45 | 254 | 50 | 0 |
| A8 | 13.29 | 137 | 21 | 0 |
| A9 | 14.11 | 207 | 34 | 0 |
| A10 | 13.4 | 252 | 39 | 0 |
>TRINITY_DN120869_c0_g2_i6 from sample A3 / Example spliced isoformTTCAATTTTGTTTGACAAGCATCATTTTGTGTCTTGATAGAGTTCTTGGTTGACTTGATTCATGTTCAGGTTTTGAGGGATCTTCTGCTCAGGATGAAAGGAGAGAGAGGAAATCTGATGTGGAGAATTCTGAAGATGAGCGGAGAAGAACCAAAATTGGAGCTCTTAAAAAGAAAGCCATCAATGCCTCCACGAAATTT
CGGCATTCCTTAAAGAAAAGAACTCCTAGGAGGAAGGTTATTTCCATTAAGGATGTACGAGATGCCGAGGAACAAGCGGCTGTTGATAACTTTCGACAAGCACTTATTGCAGAAGACCTGCTGCCTCCCAGACATGATGATTATCATATGATGTTAAGATTCTTGAAAGCAAGGAAATTTGACATTGAGAAAACAAAGCA
CATGTGGGCTGAGATGCTTCGTTGGAGAAAGGAGTATGGTGCTGATACTATTTTGGAGGATTTTGACTTCAAAGAGCTACCTGAAGTCCTCAAGTACTATCCACAAGGTCATCATGGAGTAGACAAGGATGGAAGACCAGTTTATATAGAGAGGCTTGGCATGGTTGATCCGATTAAACTCTTGCAGGTTACAACTATTG
AGAGATACCTGAAGTATCACGTTCAGGAATTTGAGAAGACTCTGAATATTAAGTTCCCTGCCTGTTCAATCGCAGCAAAAAAACACATAGATTCAGCCACCACAATTTTGGATGTACAGGGTGTGGGTTTAAAGAATTTCAGTAAGTCTGCAAGAGAACTTATATTACGTATACAGAAAATTGACGGGGACAACTATCCC
GAGACATTGTGTCAGATGTTCATCATCAATGCTGGTCCTGGTTTTAGATTGCTGTGGAACACCATAAAAGGTTTCCTTGATCCTAAGACAACTGCCAAGATACATGTTCTTGGAAATAAGTATCAAGGCAAGCTCTTAGAAGTCATTGATGCAAGCGAATTGCCCGAATTTTTGGGTGGTAACTGTGTATGTGCTGAAGG
AGGGTGCCTTGCATCTGACAAAGGGCCATGGAAGGATCCGGAGATAATGAAGTTGGTGCATGGTGAAGCTCGATTCGCAAGGCAAATTGTGACTGTAACTGTTGATGGGAAGACAATTTCGCATGGTAAACCACATTACACAAAGGCAAAGGGCGGCGATACATCTACTGCTGAGTCAGGGTCAGACATAGATGATGTTG
TCTCTCCTAAAGTACACAGGGGTCCAGGGCTTGCTCGGTTAACTCCTGTTCATGAGGAAGGCAAGGTAGCTTGGCAAGCAAATTCCTCTGATGGATTTTTGGAGTATGAATCTGTTCCTATGGTTGACAAGGCTGTGGATAGTGGTTGGAAACGAAAGGGTCATGGAGAAAATTTGCCGGTATCTAAAGATATCTTTCTA
CCTGCGGATGATCTTAAAAAACCCCAGGGGGTCATTGCGCAGATTACGGCATTTTTTATGGTCTTCATTATGAGCATACTTGCTGTATTCAATTTTGTTACAGATGGCGTAAAAAAGAAAGTGTCAAGTGGAAATATGAATGCAGAGCTGAAGTCCAAGACCATAGCAAATAATTATGGCACTGAGCCTAAGGAGGAATC
TCAGCATCCTATGCCTACATGTGAGTTCTCTGCGAAAGATGTTCTTCCATCTGTATTAAAGCGTCTTCAGGAGTTGGAAGATAAGGTCAACGAGGTCAGTGCAAAGCCTCCTCAAATGCCAGAAGAAAAGGAGGAAATGCTGAATGCTGCTACAAGTCGGATACATGCTTTAGAAACTGAGCTGGAAGCAACAAAGAAGG
CATTGAAGGAAGCGCTTGGTAAACAGGAGGAGCTTATTGAAATGATGGAGCAAATGAAGGAAGCTCAATTTCGTAAAAGGAGATTTTGTTGGTGAAGCAGATTCTCTGAACCACAGTAGCTGGTGGAAATAGTATCTGGTGTTTGATTTAAATGGCTTCTGCCCTTGTTTTACTGCTCAGAATATTTTTCCAGCTTGATG
ATTTCTAAGTCACTATATTGACTTGAGAAGAGCAAGCTGTGATTGGACTTTGGAATGTATGTGCGAGGTTTTTGGAATGTTTCTAAGTTAAAAATGGTTATTCTTTGGGGAGTGTATGCTCTGCACGAGATTTGACATGTTGGCGAGGACAAATTGTGGAGGTTCCTAATATAATAGTATGGTGTATGTTACTATGTGTT
TCCGCTTTTTCTTTTGGTGATGGTATTTAGTGAATGTAGACTTTGAGCACTGGGAATTGACGTTGTTAATTGAGTTATGCTTATTTTCAAGTCTATCTTGATTTGAATTTTGCATAGAAAGTATATGGGTAACTGTTTCTCTTGGAACTGCCTTGTTTACTTCATAGAGAAGGGCAATGGGTTAAAACTGTCAAATTGTA
GGGATCGGGG
>TRINITY_DN120869_c0_g2_i5 from sample A3 / Example unspliced isoform:ATTCTTTTTGTTAAATAAAGAAGATGAAGATGAACTAATGAGGCGTTTTTGGGGGTAAAATGGCGGGTCGAGCGGGCCGGCTGGCAAATGCGTAGCCCTGCTGGCAAGTCTAGACGCTCACGTCTTTGGCTTTCGTGCCCTACAAAGTTGACACGCGGCCAGCAAAAGTAAAGCCAGGGAGGCAAGCCACAGGTAAAGGG
AGGCAAAGGGAAGATTAGTGTTTTGCTCTGCTATGTGTATTTGCATCCAGGGCCCCAAGGATTTGTGCTAAACAAGGTAAACTCTCAACGTGTTGTTGACGCGACCATCTGCTAATATTGAAGGCTTTCGTTTTGCCGCGTAGTTGTCCCCTACTTGGCTAATAATTTCTCTAAAATTTCGAAAATGTCGGGCCCTCTGG
ACAGATTTGCGAGGCCGTGTTTTGAGGGATCTTCTGCTCAGGATGAAAGGAGAGAGAGGAAATCTGATGTGGAGAATTCTGAAGATGAGCGGAGAAGAACCAAAATTGGAGCTCTTAAAAAGAAAGCCATCAATGCCTCCACGAAATTTCGGCATTCCTTAAAGAAAAGAACTCCTAGGAGGAAGGTTATTTCCATTAAG
GATGTACGAGATGCCGAGGAACAAGCGGCTGTTGATAACTTTCGACAAGCACTTATTGCAGAAGACCTGCTGCCTCCCAGACATGATGATTATCATATGATGTTAAGGATTTTGACTTCAAAGAGCTACCTGAAGTCCTCAAGTACTATCCACAAGGTCATCATGGAGTAGACAAGGATGGAAGACCAGTTTATATAGAG
AGGCTTGGCATGGTTGATCCGATTAAACTCTTGCAGGTTACAACTATTGAGAGATACCTGAAGTATCACGTTCAGGAATTTGAGAAGACTCTGAATATTAAGTTCCCTGCCTGTTCAATCGCAGCAAAAAAACACATAGATTCAGCCACCACAATTTTGGATGTACAGGGTGTGgtaggtctaatattctatcattttct
gacttcggtttatatggctgtttttggggtgagcatattgattcaattcatcaacgatctagctattctggctttgctctaatgtggaaacagtctctggcatgctacctattggcaaaactgcaccccacttatgaatttgagcttctagtctaatattgacttctgctttgtggctgcttatatatattggcctaata
ttttcttttgactcagGGTTTAAAGAATTTCAGTAAGT
Intron 2 GTGACCTTGA ... GAATTAACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 44.83 | 32 | 26 | 15 |
| A2 | 64.29 | 15 | 27 | 7 |
| A3 | 54.72 | 24 | 29 | 14 |
| A4 | 47.37 | 20 | 18 | 7 |
| A5 | 50 | 6 | 6 | 1 |
| A6 | 62.5 | 6 | 10 | 5 |
| A7 | 52.7 | 35 | 39 | 1 |
| A8 | 45.45 | 18 | 15 | 3 |
| A9 | 44.68 | 26 | 21 | 2 |
| A10 | 43.86 | 32 | 25 | 0 |
>TRINITY_DN133130_c0_g1_i6 from sample A1 / Example spliced isoformGATACGCGCCGGGCCAATCATGGTAGTTATTCTTTTTATTAAATAAAGAAGATGGAGATGAACTAATGAGGCGTTTTTGGGGTAAAATGGCGGGTCGAGCGGGCCGGCTGGCAAATGCGTAGCCCTGCTGGCAAGTCTAGACGCTCACGTCTTTGGCTTTCGTGCCCTACAAAGTTGACACGCGGCCAGCAAAAGTAAAG
CCAGGGAGGCAAGTCACAGGTAAAGAGAGGCAAAGGGAAGATTAGTGTTTTGCTCTGCTATGTGTATTTGCATCCAGGGCCCCAAGGATTTGTGCTAAACAAGGTAAACTCTCAACGTGTTGTTGACGCGACCATCTGTTAATATAGAAGGCTTTCGTTTTGCCGCGTAGTTGTCCCCTACTTGGCTAATAATTTCTCTA
AAATTTCGAAAATGTCGGGCCCTCTGGACAGATTTGCGAGGCCGTGTTTTGAGGGATCTTCTGCTCAGGATGAAAGGAGAGAGAGGAAATCTGATGTGGAGAATTCTGAAGATGAGCGGAGAAGAACCAAAATTGGAGCTCTTAAAAAGAAAGCCATCAATGCCTCCACGAAATTTCGGCATTCCTTAAAGAAAAGAACT
CCTAGGAGGAAGGTTATTTCCATTAAGGATGTACGAGATGCCGAGGAACAAGCGGCTGTTGATAACTTTCGACAAGCACTTATTGCAGAAGACCTGCTGCCTCCCACACATGATGATTATCATATGATGTTAAGGGCATGTTCTGGTGTTGGAAAGCAAATCAACAAGCTTTTAGTATAATCATTTTCAAAGATGCGAGA
AAGATTCTTGAAAGCAAGGAAATTTGACATTGAGAAAACAAAGCACATGTGGGCTGAGATGCTTCGTTGGAGAAAGGAGTATGGTGCTGATACTATTTTGGAGGTAGGTAATTATTGTAATATAGATGTACACCTAATTGATGTATGTTGTATTAGCAGCAGATCTCCAACATTTTTCTCTTGCATTTGATGCTTTTATC
ACGAGCATTTCTTAATATATTTTATATGCATCATTTTTTCATTGTACTGTCATTGTTGTCTTCAAGGTTGCCCTTCTTTTTCATTTTTCAATAGTAATTTGTTGAGCACATTTGGCTATTTAGTATTAAGCATCACTGATTGCTAGTACTACAATTGCATACGAGTGTGTCTAAAGATCTCCATGTATGCTTTATCCCTT
TATATGGGTTAGGAATTTGAAAGAGGCTTTTCCATGTGTACTGTCTTGTTTCTCCAATTATTTGTTTTCTGCTTAATTGGCTTCTTGTGTTGCAAAATTGAATTGCATTGTAATTGTTAATTAAAATATCATTATCCTCTATATATCTTTTGTTTCTCTTTTATATATTTTGCTGTAAATTTGCACAAACTTTTCTTATA
TTGCAC
>TRINITY_DN133130_c0_g1_i13 from sample A1 / Example unspliced isoform:GATACGCGCCGGGCCAATCATGGTAGTTATTCTTTTTATTAAATAAAGAAGATGGAGATGAACTAATGAGGCGTTTTTGGGGTAAAATGGCGGGTCGAGCGGGCCGGCTGGCAAATGCGTAGCCCTGCTGGCAAGTCTAGACGCTCACGTCTTTGGCTTTCGTGCCCTACAAAGTTGACACGCGGCCAGCAAAAGTAAAG
CCAGGGAGGCAAGTCACAGGTAAAGAGAGGCAAAGGGAAGATTAGTGTTTTGCTCTGCTATGTGTATTTGCATCCAGGGCCCCAAGGATTTGTGCTAAACAAGGTAAACTCTCAACGTGTTGTTGACGCGACCATCTGTTAATATAGAAGGCTTTCGTTTTGCCGCGTAGTTGTCCCCTACTTGGCTAATAATTTCTCTA
AAATTTCGAAAATGTCGGGCCCTCTGGACAGATTTGCGAGGCCGTGTTTTGAGGGATCTTCTGCTCAGGATGAAAGGAGAGAGAGGAAATCTGATGTGGAGAATTCTGAAGATGAGCGGAGAAGAACCAAAATTGGAGCTCTTAAAAAGAAAGCCATCAATGCCTCCACGAAATTTCGGCATTCCTTAAAGAAAAGAACT
CCTAGGAGGAAGGTTATTTCCATTAAGGATGTACGAGATGCCGAGGAACAAGCGGCTGTTGATAACTTTCGACAAGCACTTATTGCAGAAGACCTGCTGCCTCCCACACATGATGATTATCATATGATGTTAAGgtgaccttgatgttttctgttttttcctggatgatgtacataaatacatgtaaataagctgcttgg
ttgattcgtttttctttctcatgggtgaaataacttttgtctggtccattttagttattgtcttcgttataagactttctttcatgtattgtaagggataaaatggccctatccaagccgccacattattagtgacaagtttaacagtgtccccacaaatcagaaacacataatagtaggagatgggtttctagaaatag
gaatggccagggtccaccatgggtacaactcctggggtagatatctaacaaaacgttgtttggtttgttgccatacaccaagcatcctcttaacaaaatattctagatattatttcatcttgggctggcagaagcactgttgcaatttagccaatgactttcccacttcaaagtgaccaacttgtatagcaaccttttta
tgaggtggtattgtttttctcctctgtttgtcatgtagtgaacttagtaaattgatggtgtggataaagtcctcatcgacatagtatgtaaccctaatgtacaacttcagtcaaccttgcctctataagggtactttattctattattgttacttgagactggaatctgctactgtattctgtctctatgctatgatatc
tgctttgtcatattgttatcaataaaagtaagaatttgctatatattttcttgttttatggcaggagaatatgaaaatgcctcaataaagaatttgtacccttggcttttcctttgactcatctagtgagtcctaagggcttctactaagcaagaatgggttaccttgtatgaaaggcaatggtatcatatgatgacttt
ttgtgaagtattgggttttgaattaacagGGCATGTTCTGGTGTTGGAAAGCAAATCAACAAGCTTTTAGTATAATCATTTTCAAAGATGCGAGAAAGGTTCTTAACTTTTACCTCCCTAGATTCTTGTGTATTAATTCCTAAGTGTCCATTTCGGGAGAGTTCTTTGATAGTCCAGAAATGATACAAGCATAAAAATTG
GCATAATAATTCACCTGCTCATTTTCTATTTATTCTTTACGAATGTTGCCTCGATCACCATTTGGAAACCCACCAAACATTTTCTGAATCTGCTGATAGAGGTAATCTACTCCTCCCCAAGTACTTGTAATTGCAGAATGAAGTGAACTCTTTTGGCAAGACTACCGCCTGAGATAGGATGTCTTTTGTTGCCAAGCCTT
TTCCATATTTTTGTCCAACAGCTTAAGCTAGGGGCATTTCATCAGCCC
Intron 3 GTATGTGAGA ... GTTAGTACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 14.37 | 140 | 30 | 17 |
| A2 | 15.5 | 109 | 17 | 23 |
| A3 | 15.27 | 147 | 17 | 36 |
| A4 | 13.26 | 121 | 8 | 29 |
| A5 | 14.29 | 69 | 8 | 15 |
| A6 | 13.11 | 106 | 15 | 17 |
| A7 | 11.65 | 292 | 27 | 50 |
| A8 | 14.69 | 151 | 19 | 33 |
| A9 | 12.28 | 225 | 28 | 35 |
| A10 | 12.65 | 221 | 20 | 44 |
>TRINITY_DN120869_c0_g2_i10 from sample A3 / Example spliced isoformTTGCTATATATTTTCTTGTTTTATGGCAGGAGAATATGAAAATGCCTCAATAAAGAATTTGTACCCTTGGCTTTTCCTTTGACTCATCTAGTGAGTCCTAAGGGCTTCTACTAAGCAAGAATGGGTTACCTTGTATGAAAGGCAATGGTATCATATGATGACTTTTTGTGAAGTATTGGGTTTTGAATTAACAGGGCATG
TTCTGGTGTTGGAAAGCAAATCAACAAGCTTTTAGTATAATCATTTTCAAAGATGCGAGAAAGGTTCTTAACTTTTACCTCCCTAGATTCTTGTGTATTAATTCCTAAGTGTCCATTTCGGGAGAGTTCTTTGATAGTCCAGAAATGATACAAGCATAAAAATTGGCATAATAATTCACCTGCTCATTTTCTATTTATTC
TTTACGAATGTTGCCTCGATCACCATTTGGAAACCCACCAAACATTTTCTGAATCTGCTGATAGAGGTAATCTACTCCTCCCCAAGTACTTGTAATTGCAGAATGAAGTGAACTCTTTTGGCAAGACTACCGCCTGAGATAGGATGTCTTTTGTTGCCAAGCCTTTTCCATATTTTTGTCCAACAGCTTAAGCTAGGGGC
ATTTCATCAGCCATTTTAAACAAAATTTCATCAGTCACTTTAAACAAAATTTCATCATTGTAGGCCTCTCATCACCTAATGAGACTGAGAGCATATTTAGATGAAAATTATGTTAAGCAATGCTGATGCATGATGCAGATTCTTGAAAGCAAGGAAATTTGACATTGAGAAAACAAAGCACATGTGGGCTGAGATGCTTC
GTTGGAGAAAGGAGTATGGTGCTGATACTATTTTGGAGGATTTTGACTTCAAAGAGCTACCTGAAGTCCTCAAGTACTATCCACAAGGTCATCATGGAGTAGACAAGGATGGAAGACCAGTTTATATAGAGAGGCTTGGCATGGTTGATCCGATTAAACTCTTGCAGGTTACAACTATTGAGAGATACCTGAAGTATCAC
GTTCAGGAATTTGAGAAGACTCTGAATATTAAGTTCCCTGCCTGTTCAATCGCAGCAAAAAAACACATAGATTCAGCCACCACAATTTTGGATGTACAGGGTGTGGGTTTAAAGAATTTCAGTAAGTCTGCAAGAGAACTTATATTACGTATACAGAAAATTGACGGGGACAACTATCCCGAGACATTGTGTCAGATGTT
CATCATCAATGCTGGTCCTGGTTTTAGATTGCTGTGGAACACCATAAAAGGTTTCCTTGATCCTAAGACAACTGCCAAGATACATGTTCTTGGAAATAAGTATCAAGGCAAGCTCTTAGAAGTCATTGATGCAAGCGAATTGCCCGAATTTTTGGGTGGTAACTGTGTATGTGCTGAAGGAGGGTGCCTTGCATCTGACA
AAGGGCCATGGAAGGATCCGGAGATAATGAAGTTGGTGCATGGTGAAGC
>TRINITY_DN120869_c0_g2_i3 from sample A3 / Example unspliced isoform:ATTCTTTTTGTTAAATAAAGAAGATGAAGATGAACTAATGAGGCGTTTTTGGGGGTAAAATGGCGGGTCGAGCGGGCCGGCTGGCAAATGCGTAGCCCTGCTGGCAAGTCTAGACGCTCACGTCTTTGGCTTTCGTGCCCTACAAAGTTGACACGCGGCCAGCAAAAGTAAAGCCAGGGAGGCAAGCCACAGGTAAAGGG
AGGCAAAGGGAAGATTAGTGTTTTTGCTCTGCTGTATGTATTTGCATCCAGGGCCCCAATGGTTTGTGCTAAACAAGGTAAACTTTCAGCGTTTTGTTGACGCGACCATCTGTTAATATAGAAGGCTTTCGTTTTGCCGCGTAGTTGTCCCCTACTTGGCTAATAATTTCTCCAGAAATTGTACAATGTCGGGCCCTCTG
GACAGATTTGCGAGGCCGTGTTTTGAGGGATCTTCTGCTCAGGATGAAAGGAGAGAGAGGAAATCTGATGTGGAGAATTCTGAAGATGAGCGGAGAAGAACCAAAATTGGAGCTCTTAAAAAGAAAGCCATCAATGCCTCCACGAAATTTCGGCATTCCTTAAAGAAAAGAACTCCTAGGAGGAAGGTTATTTCCATTAA
GGATGTACGAGATGCCGAGGAACAAGCGGCTGTTGATAACTTTCGACAAGCACTTATTGCAGAAGACCTGCTGCCTCCCAGACATGATGATTATCATATGATGTTAAGATTCTTGAAAGCAAGGAAATTTGACATTGAGAAAACAAAGCACATGTGGGCTGAGATGCTTCGTTGGAGAAAGGAGTATGGTGCTGATACTA
TTTTGGAGGATTTTGACTTCAAAGAGCTACCTGAAGTCCTCAAGTACTATCCACAAGGTCATCATGGAGTAGACAAGGATGGAAGACCAGTTTATATAGAGAGGCTTGGCATGGTTGATCCGATTAAACTCTTGCAGGTTACAACTATTGAGAGATACCTGAAGTATCACGTTCAGGAATTTGAGAAGACTCTGAATATT
AAGTTCCCTGCCTGTTCAATCGCAGCAAAAAAACACATAGATTCAGCCACCACAATTTTGGATGTACAGGGTGTGGGTTTAAAGAATTTCAGTAAGTCTGCAAGAGAACTTATATTACGTATACAGAAAATTGACGGGGACAACTATCCCGAGACATTGTGTCAGATGTTCATCATCAATGCTGGTCCTGGTTTTAGATT
GCTGTGGAACACCATAAAAGGTTTCCTTGATCCTAAGACAACTGCCAAGATACATgtatgtgagaataactttctggtacatcagatgtcttgtagatgtcttatatcttctccttgttcagtgggccaagaagttaatcattatattgcatttgaaaaatgtttcttgttagtacagGTTCTTGGAAATAAGTATCATA
GCAAGCTCTTAGAAGTCATTGATGCAAGCGAATTGCCCGAATTTTTGGGTGGTAACTGTTTATGTGCTGAAGAAGGAGGGTGCCTTGCATCTGACAAAGGGCCATGGAAGGATCCGGAGATAATGAAGTTGGTGCATGGTGAAGCCCGATTTGCAAGGCAAATTGTGACTGTAACTGTTGATGGGAAGACAATTTCGCAT
GGTAAACCACATTACACGAAGGCAAAGGGCGGTGATACATCTACTGCAGAGTCAGGGTCAGACATAGATGATGTTGTCTCTCCTAAAGTACACAGGGGTCCAGGGCTTGCTCGGTTAACTCCTGTTCATGAGGAAGGCAAGGTTGCTTGGCAAGCAAATTCGTCTGATGGGTTTTTGGAGTATGAATCTGTTCCTATGGT
TGACAAGGCTGTGGATAGTGGTTGGAAACGAAAGGGTCATGGAGAAAATTTGCCGGTATCTAAAGATATCTTTCTACCCGTGGATGATCTTAACAAACCCCAGGGGGTCATTGTGCAGATTACAGCATTTTTTATGGTCTTCATTATGAGCATACTTGCTGTATTCAATTTTGTTACAGATGGCATAAAAGAGAAAGTGT
CAAGTGGAAATATGAATGCAGAGCTGAAGTCCAAGACTATAGCATATAATTACGGCACTGAGCCTAAGGAGGAATCTCAGCATCCTATGCCTACGTGTGAGTTCACTGAGAAAGATGTTCTTCCATCTGTACTAAAGCGTCTTCAGGAGTTGGAAGATAAGGTCAACGAGTTCAGTGCAAAGGCTCCTCAAATGCCAGAA
GAAAAGGAGGAAATGCTAAATGCTGCTACAAGCCGGATACATGCTTTAGAAACTGATCTGGAAGCAACAAAGAAGGTATTGAAGGAATCACTTGGTAAACAGGAGGAGCTTATTGAAATGATGGAGCAAATGAAGGAAGCTCAATTTCGTAAAAGGAGATTTTGTTGGTGAAGCAGATTCTCTGAACCACAGTAGCTGGT
GGAAATAGTATCTGGTGTTTGATTTAAATGGCTTCTGCCCTTGGTTTACTGCTTAGAATATTTTTCCAGCTTGATGATTTCTAAGTCACTATATTGACTTGAGAAGAGCAAGCTGCGATTGGACTTTGCAATGTGTGTGCGAGGTTTTTGGAATGTTTCTAAGTTATAAATGGTTATTCTTTGGGGACTGTATGCTCTAC
ACGAGATTTGACAAGTTTACGAGGACAAATTGTGGAGGTTCCTAAAATAATAGTATGGTGTATGTTTAGTATGTCAGCTCTCGATGAATTAAAACAAGCGGACCCAATCAAGCTGAAAATCCTCGTCATTGAACAGGACAGAGATCAGAGTGAGGACGTCATTAAACAGGTAACGAAGGCGGATCAGGAGCTCCTCAACG
ATTTTTGGTATCAACCACTTGAACTGGTTGCATGGTCCGATGCATTACAAAAAGAATCAGTGTTGATAATGATAGATAGATTGAACCAAAGCTGCTCGGTGTCAAAATCCAGTTCTAGAAATTAAAGGATGACTGAATGGCCAAGATCAAATATTTACAAGCTTAGTTGAAGAAATTCCACGAAGGAACTGATTAAGTTT
GTTTTAGTTTATTTTATCTTTTGTATATTATGTTGTAAGAAACAGAGTTATTATTTTTTGTTAGTTACTAAATTTAGTTGTCGACTGGCTCGAAGCTATATAAGCAATTTTTTATGAAGCCCAAGGGGGGTGGTGAAAGACAAAGTTCGATGTAGCCTTTGGAAGCAATTTTTAATACTATAATGTTGCAG
Intron 4 GTACTTTGTG ... ATTGCTGTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 16.52 | 187 | 37 | 37 |
| A2 | 15.19 | 148 | 27 | 26 |
| A3 | 15.74 | 174 | 33 | 32 |
| A4 | 9.94 | 145 | 13 | 19 |
| A5 | 12.15 | 47 | 4 | 9 |
| A6 | 10.93 | 110 | 8 | 19 |
| A7 | 15.13 | 272 | 52 | 45 |
| A8 | 16.77 | 139 | 26 | 30 |
| A9 | 14.23 | 226 | 31 | 44 |
| A10 | 12.85 | 234 | 36 | 33 |
>TRINITY_DN133130_c0_g1_i7 from sample A1 / Example spliced isoformGATACGCGCCGGGCCAATCATGGTAGTTATTCTTTTTATTAAATAAAGAAGATGGAGATGAACTAATGAGGCGTTTTTGGGGTAAAATGGCGGGTCGAGCGGGCCGGCTGGCAAATGCGTAGCCCTGCTGGCAAGTCTAGACGCTCACGTCTTTGGCTTTCGTGCCCTACAAAGTTGACACGCGGCCACCATATCTCCTT
GTTTAAATTAAAGCGCTCGCTGACCCCAATACCGCCGGTTTATCATACTACGGTTTCGCCTTTACCGGTTCCTATCATATCCTCCCCAGCTAAACAAAATGACAACACCATCGGCTTGACAAGCCACAGGTAAAGGGAGGCAAAGGGAAGATTAGTGTTTTTGCTCTGCTGTATGTATTTGCATCCAGGGCCCCAATGGT
TTGTGCTAAACAAGGTAAACTTTCAGCGTTTTGTTGACGCGACCATCTGTTAATATAGAAGGCTTTCGTTTTGCCGCGTAGTTGTCCCCTACTTGGCTAATAATTTCTCCAGAAATTGTACAATGTCGGGCCCTCTGGACAGATTTGCGAGGCCGTGTTTTGAGGGATCTTCTGCTCAGGATGAAAGGAGAGAGAGGAAA
TCTGATGTGGAGAATTCTGAAGATGAGCGGAGAAGAACCAAAATTGGAGCTCTTAAAAAGAAAGCCATCAATGCCTCCACGAAATTTCGGCATTCCTTAAAGAAAAGAACTCCTAGGAGGAAGGTTATTTCCATTAAGGATGTACGAGATGCCGAGGAACAAGCGGCTGTTGATAACTTTCGACAAGCACTTATTGCAGA
AGACCTGCTGCCTCCCACACATGATGATTATCATATGATGTTAAGATTCTTGAAAGCAAGGAAATTTGACATTGAGAAAACAAAGCACATGTGGGCTGAGATGCTTCGTTGGAGAAAGGAGTACGGTGCTGATACTATTGAGGAGGATTTTGACTTCAAAGAGCTACCTGAAGTCCTCAAGTACTATCCACAAGGTCATC
ATGGAGTAGACAAGGATGGAAGACCAGTTTATATAGAGAGGCTTGGCATGGTTGATCCAATTAAACTCATGCAGGTTACAACTATTGAGAGATATCTCAAGTATCACGTGCAGGAATTTGAGAAGACTTTGAATGTTAAGTTCCCTGCCTGTTCCATCGCAGCAAAAAAACACATAGACTCCGCCACCACAATTTTGGAT
GTACAGGGCGTGGGTCTAAAGAATTTCAGTAAGTCTGCAAGAGAACTTATATTACGTATACAGAAAATTGATGGGGACAACTATCCCGAGACATTGTGTCAGATGTTCATCATCAATGCTGGTCCTGGTTTTAGATTGCTGTGGAACTCCATAAAAGGTTTTCTTGATCCTAAGACAACCGCCAAGATACATGTTCTTGG
AAATAAGTATCATAGCAAGCTCTTAGAAGTCATTGATGCAAGCGAATTGCCCGAATTTTTGGGTGGTAACTGTTTATGTGCTGAAGAAGGAGGGTGCCTTGCATCTGACAAAGGACCATGGAAGGATCCGGAGATAATGAAGTTGGTGCATGGTGAAGCCCGATTTGCAAGGCAAATTGTGACTGTAACTGTTGATGGGA
AGACAATTTCGCATGGTAAACCACATTACACGAAGGCAAAGGGCGGTGATACATCTACTGCAGAGTCAGGGTCAGACATAGATGATGTTGTCTCTCCTAAAGTTCACAGGGGTCCAGGGCTTGCTCGGTTAACTCCTGTTCATGAGGAAGGCAAGGTTGCTTGGCAAGCAAATTCGTCTGATGGGTTTTTGGAGTATGAA
TCTGTTCCTATGGTTGACAAGGCTGTCGATAGTGGTTGGAAACGAAAGGGTCATGGAGAAAATTTGCCGGTATCTAAAGATATCTTTCTACCCGTGGATGATCTTAACAAACCCCAGGGGGTCATTGTGCAGATTACAGCATTTTTTATGGTCTTCATTATGAGCATACTTGCTGTATTCAATTTTGTTACAGATGGCAT
AAAAGAGAAAGTGTCAAGTGGAAATATGAATGCAGAGCTGAAGTCCAAGACTATAGCATATAATTACGGCACTGAGCCTAAGGAGGAATCTCAGCATCCTATGCCTACGTGTGAGTTCACTGAGAAAGATGTTCTTCCATCTGTACTAAAGCGTCTTCAGGAGTTGGAAGATAAGGTCAACGAGTTCAGTGCAAAGGCTC
CTCAAATGCCAGAAGAAAAGGAGGAAATGCTAAATGCTGCTACAAGCCGGATACATGCTTTAGAAACTGATCTGGAAGCAACAAAGAAGGTATTGAAGGAATCACTTGGTAAACAGGAGGAGCTTATTGAAATGATGGAGCAAATGAAGGAAGCTCAATTTCGTAAAAGGAGATTTTTTTGGTGAAGCAGATTCTCTGAA
CCACAGTAGCTGGTGGAAATAATATCTGGTGTTTGATTTAAATGGCTTCTGCCCTTG
>TRINITY_DN133130_c0_g1_i12 from sample A1 / Example unspliced isoform:GATACGCGCCGGGCCAATCATGGTAGTTATTCTTTTTATTAAATAAAGAAGATGGAGATGAACTAATGAGGCGTTTTTGGGGTAAAATGGCGGGTCGAGCGGGCCGGCTGGCAAATGCGTAGCCCTGCTGGCAAGTCTAGACGCTCACGTCTTTGGCTTTCGTGCCCTACAAAGTTGACACGCGGCCACCATATCTCCTT
GTTTAAATTAAAGCGCTCGCTGACCCCAATACCGCCGGTTTATCATACTACGGTTTCGCCTTTACCGGTTCCTATCATATCCTCCCCAGCTAAACAAAATGACAACACCATCGGCTTGACAAGCCACAGGTAAAGGGAGGCAAAGGGAAGATTAGTGTTTTTGCTCTGCTGTATGTATTTGCATCCAGGGCCCCAATGGT
TTGTGCTAAACAAGGTAAACTTTCAGCGTTTTGTTGACGCGACCATCTGTTAATATAGAAGGCTTTCGTTTTGCCGCGTAGTTGTCCCCTACTTGGCTAATAATTTCTCCAGAAATTGTACAATGTCGGGCCCTCTGGACAGATTTGCGAGGCCGTGTTTTGAGGGATCTTCTGCTCAGGATGAAAGGAGAGAGAGGAAA
TCTGATGTGGAGAATTCTGAAGATGAGCGGAGAAGAACCAAAATTGGAGCTCTTAAAAAGAAAGCCATCAATGCCTCCACGAAATTTCGGCATTCCTTAAAGAAAAGAACTCCTAGGAGGAAGGTTATTTCCATTAAGGATGTACGAGATGCCGAGGAACAAGCGGCTGTTGATAACTTTCGACAAGCACTTATTGCAGA
AGACCTGCTGCCTCCCACACATGATGATTATCATATGATGTTAAGATTCTTGAAAGCAAGGAAATTTGACATTGAGAAAACAAAGCACATGTGGGCTGAGATGCTTCGTTGGAGAAAGGAGTATGGTGCTGATACTATTTTGGAGGATTTTGACTTCAAAGAGCTACCTGAAGTCCTCAAGTACTATCCACAAGGTCATC
ATGGAGTAGACAAGGATGGAAGACCAGTTTATATAGAGAGGCTTGGCATGGTTGATCCAATTAAACTCATGCAGGTTACAACTATTGAGAGATATCTCAAGTATCACGTGCAGGAATTTGAGAAGACTTTGAATGTTAAGTTCCCTGCCTGTTCCATCGCAGCAAAAAAACACATAGACTCCGCCACCACAATTTTGGAT
GTACAGGGCGTGGGTCTAAAGAATTTCAGTAAGTCTGCAAGAGAACTTATATTACGTATACAGAAAATTGATGGGGACAACTATCCCGAGgtactttgtgatattttaatgtgtagtaattcatgtcaatggttcatgaaaggcatagtgaaaaattactgcaagcaatgatacatccatggttagttttcagtttgtaa
tgtgcatcttatggtgtgtatgattttttttgttatatgtattacttaacacaatatgcaatgcaaattgctgtagACATTGTGTCAGATGTTCATCATCAATGCTGGTCCTGGTTTTAGATTGCTGTGGAACTCCATAAAAGGTTTTCTTGATCCTAAGACAACCGCCAAGATACATGTTCTTGGAAATAAGTATCATA
GCAAGCTCTTAGAAGTCATTGATGCAAGCGAATTGCCCGAATTTTTGGGTGGTAACTGTTTATGTGCTGAAGAAGGAGGGTGCCTTGCATCTGACAAAGGACCATGGAAGGATCCGGAGATAATGAAGTTGGTGCATGGTGAAGCCCGATTTGCAAGGCAAATTGTGACTGTAACTGTTGATGGGAAGACAATTTCGCAT
GGTAAACCACATTACACGAAGGCAAAGGGCGGTGATACATCTACTGCAGAGTCAGGGTCAGACATAGATGATGTTGTCTCTCCTAAAGTTCACAGGGGTCCAGGGCTTGCTCGGTTAACTCCTGTTCATGAGGAAGGCAAGGTTGCTTGGCAAGCAAATTCGTCTGATGGGTTTTTGGAGTATGAATCTGTTCCTATGGT
TGACAAGGCTGTCGATAGTGGTTGGAAACGAAAGGGTCATGGAGAAAATTTGCCGGTATCTAAAGATATCTTTCTACCTGCGGATGATCTTAAAAAACCCCAGGGGGTCATTGCGCAGATTACGGCATTTTTTATGGTCTTCATTATGAGCATACTTGCTGTATTCAATTTTGTTACAGATGGCGTAAAAAAGAAAGTGT
CAAGTGGAAATATGAATGCAGAGCTGAAGTCCAAGACCATAGCAAATAATTATGGCACTGAGCCTAAGGAGGAATCTCAGCATCCTATGCCTACATGTGAGTTCTCTGCGAAAGATGTTCTTCCATCTGTATTAAAGCGTCTTCAGGAGTTGGAAGATAAGGTCAACGAGGTCAGTGCAAAGCCTCCTCAAATGCCAGAA
GAAAAGGAGGAAATGCTGAATGCTGCTACAAGTCGGATACATGCTTTAGAAACTGAGCTGGAAGCAACAAAGAAGGCATTGAAGGAAGCGCTTGGTAAACAGGAGGAGCTTATTGAAATGATGGAGCAAATGAAGGAAGCTCAATTTCGTAAAAGGAGATTTTTTTGGTGAAGCAGATTCTCTGAACCACAGTAGCTGGT
GGAAATAATATCTGGTGTTTGATTTAAATGGCTTCTGCCCTTGTTTTACTGCTCAGAATATTTTTCCAGCTTGATGATTTCTAAGTCACTATATTGACTTGAGAAGAGCAAGCTGTGATTGGACTTTGGAATGTATGTGCGAGGTTTTTGGAATGTTTCTAAGTTAAAAATGGTTATTCTTTGGGGAGTGTATGCTCTGC
ACGAGATTTGACATGTTGGCGAGGACAAATTGTGGAGGTTCCTAATATAATAGTATGGTGTATGTTACTATGTGTTTCCGCTTTTTCTTTTGGTGATGGTATTTAGTGAATGTAGACTTTGAGCACTGGGAATTGACGTTGTTAATTGAGTTATGCTTATTTTCAAGTCTATCTTGATTTGAATTTTGCATAGAAAGTAT
ATGGGTAACTGTTTCTCTTGGAACTGCCTTGTTTACTTCATAGAGAAGGGCAATGGGTTAAAACTGTCAAATTGTAGGGATCGGGAAATTGTGTCCTAGAGCATGTTTGGCTTTACTTTTGTTCACTGTTTTGTGATATATAGTATAATTCCTTTCATTATAAGCTTGAATGTTGTATGTTATAGTTCCTGTACACTTTC
ATATTGAAGTTTGATAATAGTTGGGTACTATGATTGGTTCCTTTTATTTTTCATGTCGGAAGAAACTTTTTGTTCTTTATGTGCAATTCAGGGGAAAAACATCACTAATTGCTACAAATCCTTTTATATTTGTTGTCATCTGTGTTTCAAGC
Intron 5 GTACTTTGTG ... ATTGCTGTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 17.87 | 170 | 37 | 14 |
| A2 | 17.5 | 132 | 28 | 7 |
| A3 | 18.48 | 150 | 34 | 17 |
| A4 | 9.09 | 130 | 13 | 4 |
| A5 | 9.3 | 39 | 4 | 0 |
| A6 | 7.92 | 93 | 8 | 0 |
| A7 | 17.93 | 238 | 52 | 2 |
| A8 | 18.06 | 118 | 26 | 5 |
| A9 | 13.78 | 194 | 31 | 4 |
| A10 | 15.38 | 209 | 38 | 0 |
>TRINITY_DN120869_c0_g2_i8 from sample A3 / Example spliced isoformATTCTTTTTGTTAAATAAAGAAGATGAAGATGAACTAATGAGGCGTTTTTGGGGGTAAAATGGCGGGTCGAGCGGGCCGGCTGGCAAATGCGTAGCCCTGCTGGCAAGTCTAGACGCTCACGTCTTTGGCTTTCGTGCCCTACAAAGTTGACACGCGGCCAGCAAAAGTAAAGCCAGGGAGGCAAGCCACAGGTAAAGGG
AGGCAAAGGGAAGATTAGTGTTTTGCTCTGCTATGTGTATTTGCATCCAGGGCCCCAAGGATTTGTGCTAAACAAGGTAAACTCTCAACGTGTTGTTGACGCGACCATCTGCTAATATTGAAGGCTTTCGTTTTGCCGCGTAGTTGTCCCCTACTTGGCTAATAATTTCTCTAAAATTTCGAAAATGTCGGGCCCTCTGG
ACAGATTTGCGAGGCCGTGTTTTGAGGGATCTTCTGCTCAGGATGAAAGGAGAGAGAGGAAATCTGATGTGGAGAATTCTGAAGATGAGCGGAGAAGAACCAAAATTGGAGCTCTTAAAAAGAAAGCCATCAATGCCTCCACGAAATTTCGGCATTCCTTAAAGAAAAGAACTCCTAGGAGGAAGGTTATTTCCATTAAG
GATGTACGAGATGCCGAGGAACAAGCGGCTGTTGATAACTTTCGACAAGCACTTATTGCAGAAGACCTGCTGCCTCCCAGACATGATGATTATCATATGATGTTAAGATTCTTGAAAGCAAGGAAATTTGACATTGAGAAAACCAAGCACATGTGGGCTGAGATGCTTCGTTGGAGAAAGGAGTACGGTGCTGATACTAT
TGAGGAGGATTTTGACTTCAAAGAGCTACCTGAAGTCCTCAAGTACTATCCACAAGGTCATCATGGAGTAGACAAGGATGGAAGACCAGTTTATATAGAGAGGCTTGGCATGGTTGATCCAATTAAACTCATGCAGGTTACAACTATTGAGAGATATCTCAAGTATCACGTGCAGGAATTTGAGAAGACTTTGAATGTTA
AGTTCCCTGCCTGTTCCATCGCAGCAAAAAAACACATAGACTCCGCCACCACAATTTTGGATGTACAGGGCGTGGGTTTAAAGAATTTCAGTAAGTCTGCAAGAGAACTTATATTACGTATACAGAAAATTGATGGGGACAACTATCCCGAGACATTGTGTCAGATGTTCATCATCAATGCTGGTCCTGGTTTTAGATTG
CTGTGGAACACCATAAAAGGTTTCCTTGATCCTAAGACAACTGCCAAGATACATGT
>TRINITY_DN120869_c0_g2_i4 from sample A3 / Example unspliced isoform:ATTCTTTTTGTTAAATAAAGAAGATGAAGATGAACTAATGAGGCGTTTTTGGGGGTAAAATGGCGGGTCGAGCGGGCCGGCTGGCAAATGCGTAGCCCTGCTGGCAAGTCTAGACGCTCACGTCTTTGGCTTTCGTGCCCTACAAAGTTGACACGCGGCCAGCAAAAGTAAAGCCAGGGAGGCAAGCCACAGGTAAAGGG
AGGCAAAGGGAAGATTAGTGTTTTGCTCTGCTATGTGTATTTGCATCCAGGGCCCCAAGGATTTGTGCTAAACAAGGTAAACTCTCAACGTGTTGTTGACGCGACCATCTGCTAATATTGAAGGCTTTCGTTTTGCCGCGTAGTTGTCCCCTACTTGGCTAATAATTTCTCTAAAATTTCGAAAATGTCGGGCCCTCTGG
ACAGATTTGCGAGGCCGTGTTTTGAGGGATCTTCTGCTCAGGATGAAAGGAGAGAGAGGAAATCTGATGTGGAGAATTCTGAAGATGAGCGGAGAAGAACCAAAATTGGAGCTCTTAAAAAGAAAGCCATCAATGCCTCCACGAAATTTCGGCATTCCTTAAAGAAAAGAACTCCTAGGAGGAAGGTTATTTCCATTAAG
GATGTACGAGATGCCGAGGAACAAGCGGCTGTTGATAACTTTCGACAAGCACTTATTGCAGAAGACCTGCTGCCTCCCAGACATGATGATTATCATATGATGTTAAGATTCTTGAAAGCAAGGAAATTTGACATTGAGAAAACCAAGCACATGTGGGCTGAGATGCTTCGTTGGAGAAAGGAGTACGGTGCTGATACTAT
TGAGGAGGATTTTGACTTCAAAGAGCTACCTGAAGTCCTCAAGTACTATCCACAAGGTCATCATGGAGTAGACAAGGATGGAAGACCAGTTTATATAGAGAGGCTTGGCATGGTTGATCCAATTAAACTCATGCAGGTTACAACTATTGAGAGATATCTCAAGTATCACGTGCAGGAATTTGAGAAGACTTTGAATGTTA
AGTTCCCTGCCTGTTCCATCGCAGCAAAAAAACACATAGACTCCGCCACCACAATTTTGGATGTACAGGGCGTGGGTTTAAAGAATTTCAGTAAGTCTGCAAGAGAACTTATATTACGTATACAGAAAATTGATGGGGACAACTATCCCGAGgtactttgtgatattttaatgtgtagcaattcatgtcaatggttcatg
aaaggcatagtgaaaaattactgcaagcaatgatatatccatggttagtcttcagtttgtaatgtgcatcatatgttgtgtatgaattttttgttatatgtattacttaacacaatatgcaatgcaaattgctgtagACATTGTGTCAGATGTTCATCATCAATGCTGGTCCTGGTTTTAGATTGCTGTGGAACACCATA
AAAGGTTTCCTTGATCCTAAGACAACTGCCAAGATACATGTATGTGAGAATAACTTTCTGGTACATCAGATGTCTTGTAGATGTCTTATATCTTCTCCTTGTTCAGTGGGCCAAGAAGTTAATCATTATATTGCATTTGAAAAATGTTTCTTGTTAGTACAGGTTCTTGGAAATAAGTATCAAGGCAAGCTCTTAGAAGT
CATTGATGCAAGCGAATTGCCCGAATTTTTGGGTGGTAACTGTGTATGTGCTGAAGGAGGGTGCCTTGCATCTGACAAAGGGCCATGGAAGGATCCGGAGATAATGAAGTTGGTGCATGGTGAAGC
Intron 6 GTTCTTAACT ... CATGATGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 55.25 | 32.5 | 10 | 40 |
| A2 | 47.2 | 24 | 4.5 | 21.5 |
| A3 | 54.42 | 31 | 18.5 | 37 |
| A4 | 39.81 | 32.5 | 11 | 21.5 |
| A5 | 52.06 | 17.5 | 12.5 | 19 |
| A6 | 54.69 | 14.5 | 4 | 17.5 |
| A7 | 50 | 57 | 0 | 57 |
| A8 | 48.81 | 33 | 2 | 31.5 |
| A9 | 47.74 | 52.5 | 0.5 | 48 |
| A10 | 48.81 | 41.5 | 3.5 | 39.5 |
>TRINITY_DN122494_c0_g1_i6 from sample A2 / Example spliced isoformCTGTCTTTATGCTATGATATCTTCTTTGTCATATTGTTATCAATAAAAGTAAGAATTTTGTATATATTTTCTTGTTTTATGGCAGGAGAATATGAAAATGCCTCAATAAAGAATTTGTACCCTTGGCTTTTCCTTTGACTCATCTAGTGAGTCCTAAGGGCTTCTACTAAGCAAGAATGGGTTACCTTGTATGAAAGGCA
ATGGTATCATATGATGACTTTTTGTGAAGTATTGGGTTTTGAATTAACAGGGCATGTTCTGGTGTTGGAAAGCAAATCAACAAGCTTTTAGTATAATCATTTTCAAAGATGCGAGAAAGATTCTTGAAAGCAAGGAAATTTGACATTGAGAAAACAAAGCACATGTGGGCTGAGATGCTTCGTTGGAGAAAGGAGTATGG
TGCTGATACTATTTTGGAGGATTTTGACTTCAAAGAGCTACCTGAAGTCCTCAAGTACTATCCACAAGGTCATCATGGAGTAGACAAGGATGGAAGACCAGTTTATATAGAGAGGCTTGGCATGGTTGATCCGATTAAACTCTTGCAGGTTACAACTATTGAGAGATACCTGAAGTATCACGTTCAGGAATTTGAGAAGA
CTCTGAATATTAAGTTCCCTGCCTGTTCAATCGCAGCAAAAAAACACATAGATTCAGCCACCACAATTTTGGATGTACAGGGTGTGGGTTTAAAGAATTTCAGTAAGTCTGCAAGAGAACTTATATTACGTATACAGAAAATTGACGGGGACAACTATCCCGAGACGTTGTGTCAGATGTTCATCATCAATGCTGGTCCT
GGTTTTAGATTGCTGTGGAACACCATAAAAGGTTTCCTTGATCCTAAGACAACTGCCAAGATACATGTTCTTGGAAATAAGTATCAAGGCAAGCTCTTAGAAGTCATTGATGCAAGCGAATTGCCCGAATTTTTGGGTGGTAACTGTGTATGTGCTGAAGGAGGGTGCCTTGCATCTGACAAAGGGCCATGGAAGGATCC
GGAGATAATGAAGTTGGTGCATGGTGAAGCTCGATTCGCAAGGCAAATTGTGACTGTAACTGTTGATGGGAAGACAATTTCGCATGGTAAACCACATTACACAAAGGCAAAGGGCGGCGATACATCTACTGCTGAGTCAGGGTCAGACATAGATGATGTTGTCTCTCCTAAAGTACACAGGGGTCCAGGGCTTGCTCGGT
TAACTCCTGTTCATGAGGAAGGCAAGGTAGCTTGGCAAGCAAATTCCTCTGATGGATTTTTGGAGTATGAATCTGTTCCTATGGTTGACAAGGCTGTGGATAGTGGTTGGAAACGAAAGGGTCATGGAGAAAATTTGCCGGTATCTAAAGATATCTTTCTACCTGCGGATGATCTTAAAAAACCCCAGGGGGTCATTGCG
CAGATTACGGCATTTTTTATGGTCTTCATTATGAGCATACTTGCTGTATTCAATTTTGTTACAGATGGCGTAAAAAAGAAAGTGTCAAGTGGAAATATGAATGCAGAGCTGAAGTCCAAGACCATAGCAAATAATTATGGCACTGAGCCTAAGGAGGAATCTCAGCATCCTATGCCTACATGTGAGTTCTCTGCGAAAGA
TGTTCTTCCATCTGTATTAAAGCGTCTTCAGGAGTTGGAAGATAAGGTCAACGAGGTCAGTGCAAAGCCTCCTCAAATGCCAGAAGAAAAGGAGGAAATGCTGAATGCTGCTACAAGTCGGATACATGCTTTAGAAACTGAGCTGGAAGCAACAAAGAAGGCATTGAAGGAAGCGCTTGGTAAACAGGAGGAGCTTATTG
AAATGATGGAGCAAATGAAGGAAGCTCAATTTCGTAAAAGGAGATTTTGTTGGTGAAGCAGATTCTCTGAACCACAGTAGCTGGTGGAAATAGTATCTGGTGTTTGATTTAAATGGCTTCTGCCCTTG
>TRINITY_DN122494_c0_g1_i10 from sample A2 / Example unspliced isoform:CTGTCTTTATGCTATGATATCTTCTTTGTCATATTGTTATCAATAAAAGTAAGAATTTTGTATATATTTTCTTGTTTTATGGCAGGAGAATATGAAAATGCCTCAATAAAGAATTTGTACCCTTGGCTTTTCCTTTGACTCATCTAGTGAGTCCTAAGGGCTTCTACTAAGCAAGAATGGGTTACCTTGTATGAAAGGCA
ATGGTATCATATGATGACTTTTTGTGAAGTATTGGGTTTTGAATTAACAGGGCATGTTCTGGTGTTGGAAAGCAAATCAACAAGCTTTTAGTATAATCATTTTCAAAGATGCGAGAAAGgttcttaacttttacctccctagattcttgtgtattaattccttaagtgtccatttcgggagagttctttgatagtccaga
aatgatacaagcataaaaattggcataataattcacctgctcattttctatttattctttacgaatgttgcctcgatcaccatttggaaacccaccaaacattttctgaatctgctgatagaggtaatctactcctccccaagtacttgtaattgcagaatgaagtgaactcttttggcaagactaccgcctgagatagg
atgtcttttgttgccaagccttttccatatttttgtccaacagcttaagctaggggcatttcatcagccattttaaacaaaatttcatcagtcactttaaacaaaatttcatcattgtaggcctctcatcacctaatgagactgagagcatatttagatgaaaattatgttaagcaatgctgatgcatgatgcagATTCT
TGAAAGCAAGGAAATTTGACATTGAGAAAACAAAGCACATGTGGGCTGAGATGCTTCGTTGGAGAAAGGAGTATGGTGCTGATACTATTTTGGAGGATTTTGACTTCAAAGAGCTACCTGAAGTCCTCAAGTACTATCCACAAGGTCATCATGGAGTAGACAAGGATGGAAGACCAGTTTATATAGAGAGGCTTGGCATG
GTTGATCCGATTAAACTCTTGCAGGTTACAACTATTGAGAGATACCTGAAGTATCACGTTCAGGAATTTGAGAAGACTCTGAATATTAAGTTCCCTGCCTGTTCAATCGCAGCAAAAAAACACATAGATTCAGCCACCACAATTTTGGATGTACAGGGTGTGGGTTTAAAGAATTTCAGTAAGTCTGCAAGAGAACTTAT
ATTACGTATACAGAAAATTGACGGGGACAACTATCCCGAGACGTTGTGTCAGATGTTCATCATCAATGCTGGTCCTGGTTTTAGATTGCTGTGGAACACCATAAAAGGTTTCCTTGATCCTAAGACAACTGCCAAGATACATGTTCTTGGAAATAAGTATCAAGGCAAGCTCTTAGAAGTCATTGATGCAAGCGAATTGC
CCGAATTTTTGGGTGGTAACTGTGTATGTGCTGAAGGAGGGTGCCTTGCATCTGACAAAGGGCCATGGAAGGATCCGGAGATAATGAAGTTGGTGCATGGTGAAGCTCGATTCGCAAGGCAAATTGTGACTGTAACTGTTGATGGGAAGACAATTTCGCATGGTAAACCACATTACACAAAGGCAAAGGGCGGCGATACA
TCTACTGCTGAGTCAGGGTCAGACATAGATGATGTTGTCTCTCCTAAAGTACACAGGGGTCCAGGGCTTGCTCGGTTAACTCCTGTTCATGAGGAAGGCAAGGTAGCTTGGCAAGCAAATTCCTCTGATGGATTTTTGGAGTATGAATCTGTTCCTATGGTTGACAAGGCTGTGGATAGTGGTTGGAAACGAAAGGGTCA
TGGAGAAAATTTGCCGGTATCTAAAGATATCTTTCTACCTGCGGATGATCTTAAAAAACCCCAGGGGGTCATTGCGCAGATTACGGCATTTTTTATGGTCTTCATTATGAGCATACTTGCTGTATTCAATTTTGTTACAGATGGCGTAAAAAAGAAAGTGTCAAGTGGAAATATGAATGCAGAGCTGAAGTCCAAGACCA
TAGCAAATAATTATGGCACTGAGCCTAAGGAGGAATCTCAGCATCCTATGCCTACATGTGAGTTCTCTGCGAAAGATGTTCTTCCATCTGTATTAAAGCGTCTTCAGGAGTTGGAAGATAAGGTCAACGAGGTCAGTGCAAAGCCTCCTCAAATGCCAGAAGAAAAGGAGGAAATGCTGAATGCTGCTACAAGTCGGATA
CATGCTTTAGAAACTGAGCTGGAAGCAACAAAGAAGGCATTGAAGGAAGCGCTTGGTAAACAGGAGGAGCTTATTGAAATGATGGAGCAAATGAAGGAAGCTCAATTTCGTAAAAGGAGATTTTGTTGGTGAAGCAGATTCTCTGAACCACAGTAGCTGGTGGAAATAGTATCTGGTGTTTGATTTAAATGGCTTCTGCC
CTTG