sp|Q84XV2|GTE1_ARATH ----> Transcription factor GTE1
Intron 1 GTAATTGTCT ... TTGAGACAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 74.24 | 17 | 49 | 10 |
| A2 | 59.38 | 13 | 19 | 6 |
| A3 | 80 | 9 | 36 | 2 |
| A4 | 83.33 | 2 | 10 | 0 |
| A5 | 72.73 | 3 | 8 | 1 |
| A6 | 76.07 | 28 | 89 | 4 |
| A7 | 70.07 | 82.5 | 193 | 9 |
| A8 | 71.67 | 111.5 | 282 | 25 |
| A9 | 69.14 | 75 | 168 | 20 |
| A10 | 69.6 | 69 | 158 | 20 |
>TRINITY_DN43308_c2_g1_i5 from sample A8 / Example spliced isoformCGTTCGATGGTTTAAAAGGGGCCCTTCGCCTGGCTTTGAAAGGCGACTCGGTCGAGGCCGTTTTCTTATACCAATGGCAAAGCCGAACACCCCGAAAATAAAAATTCCTTTCACCATTCGTCGATGTATAAATAAGCACAAGACTTTCATTCACACCACTGTGGCGTTACCGCATACCATTCATTTGTAGTTGCAACACG
TCCCCTAATGGCCTATCCACCATTGCCAAATGCAAAGTCCTCCTGAAAAAATGTCTGAAATTTCAAAAAATTCAGAAATCCCAATCACCCAAGAATGGAAAAGCACAGACAACCACGGATTAAATTCAGGGCCTGACATTGTTGGGTATCTGAAGTACAAAATTACAGAAATTACCAATCAGCCAAGAAGGCCAACAATT
CACAAATCTGAAAATGGCATAGTGTCTGAGCCTCATTGTGGGAATCTGAGTGAAGAAACTGAGAAAAATGGCGGGGATTACAGACAAAATCAACATATACTTGAAAACGAATGCAGTTCAGCGAAGAATAAGCGTTTGTTTGAAGAAGGTGTTGGGGGAGGACTCGCAGAAACTCAAAAGGAGCGGTTGAAGAATTATCT
CAAAGAAAGTGTTGCAGTCATGAACTCAGAAGTGGATGAGATCACGCAACACAAATGGTGCTGGCCATTTACTCAACCTGTTGATGTTGCGGGCTTGAGTTTACGTAACTACTATGATGTAATAAAAAAGCCTATGGACCTGGGAAGCATTAGAGATCGGATGGAGGCAACAGATGGTTCAGGTTACAGTAATGCTCGTG
AAATATATGAAGATGTGAGACTTGTTTTCAGGAATGCAATGATATACAATAAACCAGGGACAGAAGTGTACATGATGGCAAAAGCTCTGTTGGAGAAGTTTGAAGAAAAGTGGAGAAGCATTTTGGAACCAAAACTTATTGAACTGGAAGCAAAAAGGGAGGAGCAGGGTTCTATAGATATTGGTGGGCAGGATTCAGAA
GTAGCTCTGCAAAAATATTCAGATGAAGTCTTTGGAAAGCTCAATAATATCGAACAACAACTGGAAGAATTTCTTGGAGCAGCAACATCCAATACCAGGGCAATGTTAGCAACTGAAAAGAAAGAACTGGTCCGCAGAATTCAGCGCCTTCCATCTAGTGGCCTTAATCGTATTGTAGAGATTATTGCGCAGAGGAATCA
TTCATATGATGTTTCAGCCGAGGAGGTTCAGGTTGATTTGGACAATGAGGATCCTGCAACATTGTGGAGATTGTACATCTATTTGCAGACAGTTAAAAATGCAAGCCATTCTGTTGACAACAGCTAGAATGCCAATTACTTGATAAATGAAAGGCACTCTGTCATGGTGTTGCCACGATGATGACCCAAGTTCAAACCTT
AGCGGGCTCTGGAGCCTTGATCATGTGCATGCGTTTGCAAATTTTGACAACCCACATGTTAAAGTAGACTTTACCACAATAATGCGAAGTGGGGGTTCATACTCAATAGCTCCCTGCAGATCAAACTAAGCATTTACCCTTACCCAAAAAAATGCAAAAGTTGCATGGTCATGACTGCTTTCTTGTCAAATTTGACAAGG
ATTTTTCTTCTTGACTAAATGCGGCAGTCTTTACGAAATTGAACAGTCACCAATGAAATGAAATGAACAATATTCATTACAATTAGACTTATATATATGTAACAATGTTGAATGTGGTAAGCCA
>TRINITY_DN43308_c2_g1_i6 from sample A8 / Example unspliced isoform:CGTTCGATGGTTTAAAAGGGGCCCTTCGCCTGGCTTTGAAAGGCGACTCGGTCGAGGCCGTTTTCTTATACCAATGGCAAAGCCGAACACCCCGAAAATAAAAATTCCTTTCACCATTCGTCGATGTATAAATAAGCACAAGACTTTCATTCACACCACTGTGGCGTTACCGCATACCATTCATTTGTAGTTGCAACACG
TCCCCTAATGGCCTATCCACCATTGCCAAATGCAAAGTCCTCCTGAAAAAATGTCTGAAATTTCAAAAAATTCAGAAATCCCAATCACCCAAGAATGGAAAAGCACAGACAACCACGGATTAAATTCAGGGCCTGACATTGTTGGGTATCTGAAGTACAAAATTACAGAAATTACCAATCAGCCAAGAAGGCCAACAATT
CACAAATCTGAAAATGGCATAGTGTCTGAGCCTCATTGTGGGAATCTGAGTGAAGAAACTGAGAAAAATGGCGGGGATTACAGACAAAATCAACATATACTTGAAAACGAATGCAGTTCAGCGAAGAATAAGCGTTTGTTTGAAGAAGGTGTTGGGGGAGGACTCGCAGAAACTCAAAAGGAGCGGTTGAAGAATTATCT
CAAAGAAAGTGTTGCAGTCATGAACTCAGAAGTGGATGAGATCACGCAACACAAATGGTGCTGGCCATTTACTCAACCTGTTGATGTTGCGGGCTTGAGTTTACGTAACTACTATGATGTAATAAAAAAGCCTATGGACCTGGGAAGCATTAGAGATCGGATGGAGGCAACAGATGGTTCAGGTTACAGTAATGCTCGTG
AAATATATGAAGATGTGAGACTTGTTTTCAGGAATGCAATGATATACAATAAACCAGGGACAGAAGTGTACATGATGGCAAAAGCTCTGTTGGAGAAGTTTGAAGAAAAGTGGAGAAGCATTTTGGAACCAAAACTTATTGAACTGGAAGCAAAAAGGGAGGAGCAGGGTTCTATAGATATTGGTGGGCAGGATTCAGAA
GTAGCTCTGCAAAAATATTCAGATGAAGTCTTTGGAAAGCTCAATAATATCGAACAACAACTGGAAGAATTTCTTGGAGCAGCAACATCCAATACCAGGGCAATGTTAGCAACTGAAAAGAAAGAACTGGTCCGCAGAATTCAGCGCCTTCCATCTAGTGGCCTTAATCGTATTGTAGAGATTATTGCGCAGAGGAATCA
TTCATATGATGTTTCAGCCGAGGAGGTTCAGGTTGATTTGGACAATGAGGATCCTGCAACATTGTGGAGATTGTACATCTATTTGCAGACAGTTAAAAATGCAAGCCATTCTGTTGACAACAGCTAGAATGCCAATTACTTGATAAATTAAAGGCACTCTGTCATGgtaattgtctggtggtgtttacgataacattttc
tatatttttactcattttttagatgtggcggttatgtcatgctaacccttctggtaatggagaatttgggatgcgaaagggactcatggaaacattgtcaaagtaaccatttaatttccaaatatgatttcttcttcaatgaggtctagtggctggttcaggagttcagccaactttcatagatttaggcgtttgtttga
gataagctcccagggcttttaatcctctgtacaaagttggctcaagagtcttcgctcttaaattgtatatatttgtgcttttcaagaataattcggaaagtgcaatttacagctgttttggtattccaagcatacaacagatgtgtataattattcatttcaacttgaatgatgacagtaggcagtagatggcatgtttt
ggttctgtaatctaagattatttccttgatttatttatttatgaatttcttttaaatatgaacaaggtgttgccacgatgatgacccaagttcaaaccttagcgggctttggagccttgatcatgtgcatgtggtgctgtggtccagtgattgagacaagGTGTTGCCACGATGATGACCCAAGTTCAAACCTTAGCGGG
CTCTGGAGCCTTGATCATGTGCATGCGTTTGCAAATTTTGACAACCCACATGTTAAAGTAGACTTTACCACAATAATGCGAAGTGGGGGTTCATACTCAATAGCTCCCTGCAGATCAAACTAAGCATTTACCCTTACCCAAAAAAATGCAAAAGTTGCATGGTCATGACTGCTTTCTTGTCAAATTTGACAAGGATTTTT
CTTCTTGACTAAATGCGGCAGTCTTTACGAAATTGAACAGTCACCAATGAAATGAAATGAACAATATTCATTACAATTAGACTTATATATATGTAACAATGTTGAATGTGGTAAGCCA
Intron 2 GTAATTGTCT ... TATGAACAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 72.06 | 19 | 49 | 9 |
| A2 | 55.88 | 15 | 19 | 7 |
| A3 | 76.6 | 11 | 36 | 2 |
| A4 | 83.33 | 2 | 10 | 0 |
| A5 | 72.73 | 3 | 8 | 2 |
| A6 | 74.79 | 30 | 89 | 2 |
| A7 | 69.18 | 86 | 193 | 9 |
| A8 | 72.49 | 107 | 282 | 6 |
| A9 | 68.85 | 76 | 168 | 12 |
| A10 | 70.85 | 65 | 158 | 2 |
>TRINITY_DN46348_c0_g2_i7 from sample A7 / Example spliced isoformGCCGTTTTCTTATACCAATGGCAAAGCCGAACACCCCGAAAATAAAAATTCCTTTCACCATTCGTCGATGTATAAATAAGCACAAGACTTTCATTCACACCACTGTGGCGTTACCGCATACCATTCATTTGTAGTTGCAACACGTCCCCTAATGGCCTATCCACCATTGCCAAATGCAAAGTCCTCCTGAAAAAATGTCT
GAAATTTCAAAAAATTCAGAAATCCCAATCACCCAAGAATGGAAAAGCACAGACAACCACGGATTAAATTCAGGGCCTGACATTGTTGGGTATCTGAAGTACAAAATTACAGAAATTACCAATCAGCCAAGAAGGCCAACAATTCACAAATCTGAAAATGGCATAGTGTCTGAGCCTCATTGTGGGAATCTGAGTGAAGA
AACTGAGAAAAATGGCGGGGATTACCGACAAAATCAACATATACTTGAAAACGAATGCAGTTCAGCGAAGAATAAGCGTTTGTTTGAAGAAGGTGTTGGGGGAGGACTCGCAGAAACTCAAAAGGAGCGGTTGAAGAATTATCTCAAAGAAAGTGTTGCAGTCATGAACTCAGAAGTGGATGAGGTGATACAGCAAGTTC
TTCAAGTGTCTCACATGCACACAAGCCTGAAAAGGAAAAGGTCAAGGGCTATTATTTCTTCAAAAAATGATGAAACAGAGAAAAGTAGTAAGAAACAAAGAATGCTATTTTTAGCTCGTTCGGAGGCTGCTCATAGAAGGAGTATGGCAGATATTTTGCGACAGTTCGGTTCTATTCTCAAACAGATCACGCAACACAAA
TGGTGCTGGCCATTTACTCAACCTGTTGATGTTGCGGGCTTGAGTTTACGTAACTACTATGATGAAGCAAAAAGGGAGGAGCAGGGTTCTATAGATATTGGTGGGCAGGATTCAGAAGTAGCTCTGCAAAAATATTCAGATGAAGTCTTTGGAAAGCTCAATAATATCGAACAACAACTGGAAGAATTTCTTGGAGCAGC
AACATCCAATACCAGGGCAATGTTAGCAACTGAAAAGAAAGAACTGGTCCGCAGAATTCAGCGCCTTCCATCTAGTGGCCTTAATCGTATTGTAGAGATTATTGCGCAGAGGAATCATTCATATGATGTTTCAGCCGAGGAGGTTCAGGTTGATTTGGACAATGAGGATCCTGCAACATTGTGGAGATTGTACATCTATT
TGCAGACAGTTAAAAATGCAAGCCATTCTGTTGACAACAGCTAGAATGCCAATTACTTGATAAATGAAAGGCACTCTGTCATGGTGTTGCCACGATGATGACCCAAGTTCAAACCTTAGCGGGCTTTGGAGCCTTGATCATGTGCATGTGGTGCTGTGGTCCAGCGATTGAGACAAGTTGTTGCCACGATGATGACCCAA
GTTCAAACCTTAGCGGGCTCTGGAGCCTTGATCATGTGCATGCGTTTGCAAATTTTGACAACCCACATGTTAAAGTAGACTTTACCACAATAATGCGAAGTGGGGGTTCATACTCAATAGCTCCCTGCAGATCAAACTAAGCATTTACCCTTACCCAAAAAAATGCAAAAGTTGCACGGTCATGACTGCTTTCTTTTCAA
ATTTGACAAGGATTTTTCTTCTTGACTAAATGCGGCAGTCTTTACGAAATTGAACAGTCACCAATGAAATGAAATGAACAATATTCATTACAATTAGACTTATATATATGTAACAATGTTGAATGTGGTAAGCCTTTTTAATTTTAAATTTACTTATTTTATGGCTGC
>TRINITY_DN46348_c0_g2_i12 from sample A7 / Example unspliced isoform:GCCGTTTTCTTATACCAATGGCAAAGCCGAACACCCCGAAAATAAAAATTCCTTTCACCATTCGTCGATGTATAAATAAGCACAAGACTTTCATTCACACCACTGTGGCGTTACCGCATACCATTCATTTGTAGTTGCAACACGTCCCCTAATGGCCTATCCACCATTGCCAAATGCAAAGTCCTCCTGAAAAAATGTCT
GAAATTTCAAAAAATTCAGAAATCCCAATCACCCAAGAATGGAAAAGCACAGACAACCACGGATTAAATTCAGGGCCTGACATTGTTGGGTATCTGAAGTACAAAATTACAGAAATTACCAATCAGCCAAGAAGGCCAACAATTCACAAATCTGAAAATGGCATAGTGTCTGAGCCTCATTGTGGGAATCTGAGTGAAGA
AACTGAGAAAAATGGCGGGGATTACCGACAAAATCAACATATACTTGAAAACGAATGCAGTTCAGCGAAGAATAAGCGTTTGTTTGAAGAAGGTGTTGGGGGAGGACTCGCAGAAACTCAAAAGGAGCGGTTGAAGAATTATCTCAAAGAAAGTGTTGCAGTCATGAACTCAGAAGTGGATGAGGTGATACAGCAAGTTC
TTCAAGTGTCTCACATGCACACAAGCCTGAAAAGGAAAAGGTCAAGGGCTATTATTTCTTCAAAAAATGATGAAACAGAGAAAAGTAGTAAGAAACAAAGAATGCTATTTTTAGCTCGTTCGGAGGCTGCTCATAGAAGGAGTATGGCAGATATTTTGCGACAGTTCGGTTCTATTCTCAAACAGATCACGCAACACAAA
TGGTGCTGGCCATTTACTCAACCTGTTGATGTTGCGGGCTTGAGTTTACGTAACTACTATGATGAAGCAAAAAGGGAGGAGCAGGGTTCTATAGATATTGGTGGGCAGGATTCAGAAGTAGCTCTGCAAAAATATTCAGATGAAGTCTTTGGAAAGCTCAATAATATCGAACAACAACTGGAAGAATTTCTTGGAGCAGC
AACATCCAATACCAGGGCAATGTTAGCAACTGAAAAGAAAGAACTGGTCCGCAGAATTCAGCGCCTTCCATCTAGTGGCCTTAATCGTATTGTAGAGATTATTGCGCAGAGGAATCATTCATATGATGTTTCAGCCGAGGAGGTTCAGGTTGATTTGGACAATGAGGATCCTGCAACATTGTGGAGATTGTACATCTATT
TGCAGACAGTTAAAAATGCAAGCCATTCTGTTGACAACAGCTAGAATGCCAATTACTTGATAAATTAAAGGCACTCTGTCATGgtaattgtctggtggtgtttacgataacattttctatatttttactcattttttagatgtggcggttatgtcatgctaacccttctggtaatggagaatttgggatgcgaaagggac
tcatggaaacattgtcaaagtaaccatttaatttccaaatatgatttcttcttcaatgaggtctagtggctggttcaggagttcagccaactttcatagatttaggcgtttgtttgagataagctcccagggcttttaatcctctgtacaaagttggctcaagagtcttcgctcttaaattgtatatatttgtgcttttc
aagaataattcggaaagtgcaatttacagctgttttggtattccaagcatacaacagatgtgtataattattcatttcaacttgaatgatgacagtaggcagtagatggcacgttttggttctgtaatctaagattatttccttgatttatttatttatgaatttcttttaaatatgaacaagGTGTTGCCACGATGATG
ACCCAAGTTCAAACCTTAGCGGGCTTTGGAGCCTTGATCATGTGCATGTGGTGCTGTGGTCCAGTGATTGAGACAAGGTGTTGCCACGATGATGACCCAAGTTCAAACCTTAGCGGGCTCTGGAGCCTTGATCATGTGCATGCGTTTGCAAATTTTGACAACCCACATGTTAAAGTAGACTTTACCACAATAATGCGAAG
TGGGGGTTCATACTCAATAGCTCCCTGCAGATCAAACTAAGCATTTACCCTTACCCAAAAAAATGCAAAAGTTGCACGGTCATGACTGCTTTCTTTTCAAATTTGACAAGGATTTTTCTTCTTGACTAAATGCGGCAGTCTTTACGAAATTGAACAGTCACCAATGAAATGAAATGAACAATATTCATTACAATTAGACT
TATATATATGTAACAATGTTGAATGTGGTAAGCCTTTTTAATTTTAAATTTACTTATTTTATGGCTGC
Intron 3 GTGATACAGC ... TCTCAAACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 79.48 | 19.3 | 72 | 43.4 |
| A2 | 71.85 | 18.2 | 45 | 24.4 |
| A3 | 69.96 | 27.3 | 62.4 | 25.4 |
| A4 | 75.63 | 13.8 | 42.2 | 17.7 |
| A5 | 62.06 | 7.6 | 12 | 12.7 |
| A6 | 79.62 | 12.5 | 47 | 13.4 |
| A7 | 78.85 | 37.9 | 139 | 72.9 |
| A8 | 76.68 | 30.6 | 99.1 | 57.7 |
| A9 | 77.95 | 36.2 | 126 | 54.9 |
| A10 | 69.65 | 49.6 | 111 | 44.3 |
>TRINITY_DN122870_c1_g1_i1 from sample A1 / Example spliced isoformTCATGAACTCAGAAGTGGATGAGATCACGCAACACAAATGGTGCTGGCCATTTACTCAACCTGTTGATGTTGCGGGCTTGAGTTTACGTAACTACTATGATGTAATAAAAAAGCCTATGGACCTGGGAAGCATTAGAGATCGGATGGAGGCAACAGATGGTTCAGGTTACAGTAATGCTCGTGAAATATATGAAGATGTG
AGACTTGTTTTCAGGAATGCAATGATATACAATAAACCAGGGACAGAAGTGTACATGATGGCAAAAGCTCTGTTGGAGAAGTTTGAAGAAAAGTGGAGAAGCATTTTGGAACCAAAACTTATTGAACTGGAAGCAAAAAGGGAGGAGCAGGGTTCTATAGATATTGGTGGGCAGGATTCAGAAGTAGCTCTGCAAAAATA
TTCAGATGAAGTCTTTGGAAAGCTCAAGAATATCGAACAACAACTGGAAGAATTTCTTGGAGCAGCAACATCCAATACCAGGGCAATGTCAGCAACTGAAAAGAAAGAACTGGTCCGCAGAATTCAGCGCCTTCCATCTAGTGGCCTTAATCGTATTGTAGAGATTATTGCGCAGAGGAATCATTCATATGATGTTTCAG
CCGAGGAGGTTCAGGTTGATTTGGACAATGAGGATCCTGCAACATTGTGGAGATTGTACATCTATTTGCAGACAGTTAAAAATGCAAGCCATTCTGTTGACAACAGCTAGAATGCCAATTACTTGATAAATTAAAGGCACTCTGTCATGGTAATTGTCTGGTGGTGTTTACGATAACATTTTCTATATTTTTACTCATTT
TTTAGATGTGGCGGTTATGTCATGCTAACCCTTCTGGTAATGGAGAATTTGGGATGCGAAAGGGACTCATGGAAACATTGTCAAAGTAACCATTTAATTTCCAAATATGATTTCTTCTTCAATGAGGTCTGGTGGCTGGTTCAGGAGTTCAGCCAACTTTCATAGATTTAGGCGTTTGTTTGAGATAAGCTCCCAGGGCT
TTTAATCCTCTGTACAAAGTTGGCTCAAGAGTCTTCGCTCTTAAATTGTATATATTTGTGCTTTTCAAGAATAATTCGGAAAGTGCAATTTACAGCTGTTTTGGTATTCTAAGCG
>TRINITY_DN122870_c1_g1_i10 from sample A1 / Example unspliced isoform:GTTTTCTTATACCAATGGCAAAGCCGAACACCCCGAAAATAAAAATTCCTTTCACCATTCGTCGATGTATAAATAAGCACAAGACTTTCATTCACACCACTGTGGCGTTACCGCATACCATTCATTTGTAGTTGCAACACGTCCCCTAATGGCCTATCCACCATTGCCAAATGCAAAGTCCTCCTGAAAAAATGTCTGAA
ATTTCAAAAAATTCAGAAATCCCAATCACCCAAGAATGGAAAAGCACAGACAACCACGGATTAAATTCAGGGCCTGACATTGTTGGGTATCTGAAGTACAAAATTACAGAAATTACCAATCAGCCAAGAAGGCCAACAATTCACAAATCTGAAAATGGCATAGTGTCTGAGCCTCATTGTGGGAATCTGAGTGAAGAAAC
TGAGAAAAATGGCGGGGATTACCGACAAAATCAACATATACTTGAAAACGAATGCAGTTCAGCGAAGAATAAGCGTTTGTTTGAAGAAGGTGTTGGGGGAGGACTCGCAGAAACTCAAAAGGAGCGGTTGAAGAATTATCTCAAGGAAAGTGTTGCAGTCATGAACTCAGAAGTGGATGAGgtgatacagcaagttcttc
aagtgtctcacatgcacacaagcctgaaaaggaaaaggtcaagggctattatttcttcaaaaaatgatgaaacagagaaaagtagtaagaaacaaagaatgctatttttagctcgttcggaggctgctcatagaaggagtatggcagatattttgcgacagttcggttctattctcaaacagATCACGCAACACAAATGG
TGCTGGCCATTTACTCAACCTGTTGATGTTGCGGGCTTGAGTTTACGTAACTACTATGATGTAATAAAAAAGCCTATGGACCTGGGAAGCATTAGAGATCGGATGGAGGCAACAGATGGTTCAGGTTACAGTAATGCTCGTGAAATATATGAAGATGTGAGACTTGTTTTCAGGAATGCAATGATATACAATAAACCAGG
GACAGAAGTGTACATGATGGCAAAAGCTCTGTTGGAGAAGTTTGAAGAAAAGTGGAGAAGCATTTTGGAACCAAAACTTATTGAACTGGAAGCAAAAAGGGAGGAGCAGGGTTCTATAGATATTGGTGGGCAGGATTCAGAAGTAGCTCTGCAAAAATATTCAGATGAAGTCTTTGGAAAGCTCAAGAATATCGAACAAC
AACTGGAAGAATTTCTTGGAGCAGCAACATCCAATACCAGGGCAATGTCAGCAACTGAAAAGAAAGAACTGGTCCGCAGAATTCAGCGCCTTCCATCTAGTGGCCTTAATCGTATTGTAGAGATTATTGCGCAGAGGAATCATTCATATGATGTTTCAGCCGAGGAGGTTCAGGTTGATTTGGACAATGAGGATCCTGCA
ACATTGTGGAGATTGTACATCTATTTGCAGACAGTTAAAAATGCAAGCCATTCTGTTGACAACAGCTAGAATGCCAATTACTTGATAAATTAAAGGCACTCTGTCATGGTAATTGTCTGGTGGTGTTTACGATAACATTTTCTATATTTTTACTCATTTTTTAGATGTGGCGGTTATGTCATGCTAACCCTTCTGGTAAT
GGAGAATTTGGGATGCGAAAGGGACTCATGGAAACATTGTCAAAGTAACCATTTAATTTCCAAATATGATTTCTTCTTCAATGAGGTCTGGTGGCTGGTTCAGGAGTTCAGCCAACTTTCATAGATTTAGGCGTTTGTTTGAGATAAGCTCCCAGGGCTTTTAATCCTCTGTACAAAGTTGGCTCAAGAGTCTTCGCTCT
TAAATTGTATATATTTGTGCTTTTCAAGAATAATTCGGAAAGTGCAATTTACAGCTGTTTTGGTATTCTAAGCG
Intron 4 GTGATACAGC ... CCAATACCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 84.34 | 13 | 72 | 68 |
| A2 | 79.01 | 17 | 45 | 83 |
| A3 | 72.94 | 23 | 62 | 62 |
| A4 | 80.95 | 10 | 40 | 45 |
| A5 | 77.78 | 5 | 12 | 23 |
| A6 | 74.09 | 25 | 47 | 96 |
| A7 | 78.01 | 53 | 139 | 237 |
| A8 | 79 | 46 | 99 | 247 |
| A9 | 82.7 | 32 | 126 | 180 |
| A10 | 77.55 | 44 | 111 | 193 |
>TRINITY_DN42841_c0_g2_i3 from sample A6 / Example spliced isoformTGAAAGGCTCGGTGACTCGGTCTAGGCCGTATTCTTAGCGATACCAATGGCAAAGCCAAACACCCCGAAAATAAAAATTCCTTTCACCATTCGTCGATGTATAAATAAGCACAAGACTTTCATTCACACCACTGTGGCGTTACCGCATACCATTCATTTGTAGTTGCAACACGTCCCCTAATGGCCTATCCACCATTGCC
AAATGCAAAGTCCTCCTGAAAAAATGTCTGAAATTTCAAAAAATTCAGAAATCCCAATCACCCAAGAATGGAAAAGCACAGACAACCACGGATTAAATTCAGGGCCTGACATTGTTGGGTATCTGAAGTACAAAATTACAGAAATTACCAATCAGCCAAGAAGGCCAACAATTCACAAATCTGAAAATGGCATAGTGTCT
GAGCCTCATTGTGGGAATCTGAGTGAAGAAACTGAGAAAAATGGCGGGGATTACCGACAAAATCAACATATACTTGAAAACGAATGCAGTTCAGCGAAGAATAAGCGTTTGTTTGAAGAAGGTGTTGGGGGAGGACTCGCAGAAACTCAAAAGGAGCGGTTGAAGAATTATCTCAAAGAAAGTGTTGCAGTCATGAACTC
AGAAGTGGATGAGGGCAATGTTAGCAACTGAAAAGAAAGAACTGGTCCGCAGAATTCAGCGCCTTCCATCTAGTGGCCTTAATCGTATTGTAGAGATTATTGCGCAGAGGAATCATTCATATGATGTTTCAGCCGAGGAGGTTCAGGTTGATTTGGACAATGAGGATCCTGCAACATTGTGGAGATTGTACATCTATTTG
CAGACAGTTAAAAATGCAAGCCATTCTGTTGACAACAGCTAGAATGCCAATTACTTGATAAATTAAAGGCACTCTGTCATGGTAATTGTCTGGTGGTGTTTACGATAACATTTTCTATATTTTTACTCATTTTTTAGATGTGGCGGTTATGTCATGCTAACCCTTCTGGTAATGGAGAATTTGGGATGCGAAAGGGACTC
ATGGAAACATTGTCAAAGTAACCATTTAATTTCCAAATATGATTTCTTCTTCAATGAGGTCTAGTGGCTGGTTCAGGAGTTCAGCCAACTTTCATAGATTTAGGCGTTTGTTTGAGATAAGCTCCCAGGGCTTTTAATCCTCTGTACAAAGTTGGCTCAAGAGTCTTCGCTCTTAAATTGTATATATTTGTGCTTTTCAA
GAATAATTCGGAAAGTGCAATTTACAGCTGTTTTGGTATTCCAAGCATACAACAGATGTGTATAATTATTCATTTCAACTTGAATGATGACAGTAGGCAGTAGATGGCACGTTTTGGTTCTGTAATCTAAGATTATTTCCTTGATTTATTTATTTATG
>TRINITY_DN42841_c0_g2_i4 from sample A6 / Example unspliced isoform:TGAAAGGCTCGGTGACTCGGTCTAGGCCGTATTCTTAGCGATACCAATGGCAAAGCCAAACACCCCGAAAATAAAAATTCCTTTCACCATTCGTCGATGTATAAATAAGCACAAGACTTTCATTCACACCACTGTGGCGTTACCGCATACCATTCATTTGTAGTTGCAACACGTCCCCTAATGGCCTATCCACCATTGCC
AAATGCAAAGTCCTCCTGAAAAAATGTCTGAAATTTCAAAAAATTCAGAAATCCCAATCACCCAAGAATGGAAAAGCACAGACAACCACGGATTAAATTCAGGGCCTGACATTGTTGGGTATCTGAAGTACAAAATTACAGAAATTACCAATCAGCCAAGAAGGCCAACAATTCACAAATCTGAAAATGGCATAGTGTCT
GAGCCTCATTGTGGGAATCTGAGTGAAGAAACTGAGAAAAATGGCGGGGATTACCGACAAAATCAACATATACTTGAAAACGAATGCAGTTCAGCGAAGAATAAGCGTTTGTTTGAAGAAGGTGTTGGGGGAGGACTCGCAGAAACTCAAAAGGAGCGGTTGAAGAATTATCTCAAAGAAAGTGTTGCAGTCATGAACTC
AGAAGTGGATGAGgtgatacagcaagttcttcaagtgtctcacatgcacacaagcctgaaaaggaaaaggtcaagggctattatttcttcaaaaaatgatgaaacagagaaaagtagtaagaaacaaagaatgctatttttagctcgttcggaggctgctcatagaaggagtatggcagatattttgcgacagttcggtt
ctattctcaaacagatcacgcaacacaaatggtgctggccatttactcaacctgttgatgttgcgggcttgagtttacgtaactactatgatgaagcaaaaagggaggagcagggttctatagatattggtgggcaggattcagaagtagctctgcaaaaatattcagatgaagtctttggaaagctcaataatatcgaa
caacaactggaagaatttcttggagcagcaacatccaataccagGGCAATGTTAGCAACTGAAAAGAAAGAACTGGTCCGCAGAATTCAGCGCCTTCCATCTAGTGGCCTTAATCGTATTGTAGAGATTATTGCGCAGAGGAATCATTCATATGATGTTTCAGCCGAGGAGGTTCAGGTTGATTTGGACAATGAGGATCC
TGCAACATTGTGGAGATTGTACATCTATTTGCAGACAGTTAAAAATGCAAGCCATTCTGTTGACAACAGCTAGAATGCCAATTACTTGATAAATTAAAGGCACTCTGTCATGGTAATTGTCTGGTGGTGTTTACGATAACATTTTCTATATTTTTACTCATTTTTTAGATGTGGCGGTTATGTCATGCTAACCCTTCTGG
TAATGGAGAATTTGGGATGCGAAAGGGACTCATGGAAACATTGTCAAAGTAACCATTTAATTTCCAAATATGATTTCTTCTTCAATGAGGTCTAGTGGCTGGTTCAGGAGTTCAGCCAACTTTCATAGATTTAGGCGTTTGTTTGAGATAAGCTCCCAGGGCTTTTAATCCTCTGTACAAAGTTGGCTCAAGAGTCTTCG
CTCTTAAATTGTATATATTTGTGCTTTTCAAGAATAATTCGGAAAGTGCAATTTACAGCTGTTTTGGTATTCCAAGCATACAACAGATGTGTATAATTATTCATTTCAACTTGAATGATGACAGTAGGCAGTAGATGGCACGTTTTGGTTCTGTAATCTAAGATTATTTCCTTGATTTATTTATTTATG
Intron 5 GTACGTGCCC ... AACATTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 23.19 | 53 | 16 | 0 |
| A2 | 17.65 | 28 | 6 | 0 |
| A3 | 23.64 | 42 | 13 | 0 |
| A4 | 21.43 | 11 | 3 | 0 |
| A5 | 29.03 | 22 | 9 | 0 |
| A6 | 18.77 | 82.3 | 19 | 0 |
| A7 | 15.06 | 169.3 | 30 | 0 |
| A8 | 13.01 | 214 | 32 | 0 |
| A9 | 13.91 | 130 | 21 | 0 |
| A10 | 20.51 | 155 | 40 | 0 |
>TRINITY_DN43308_c2_g1_i5 from sample A8 / Example spliced isoformCGTTCGATGGTTTAAAAGGGGCCCTTCGCCTGGCTTTGAAAGGCGACTCGGTCGAGGCCGTTTTCTTATACCAATGGCAAAGCCGAACACCCCGAAAATAAAAATTCCTTTCACCATTCGTCGATGTATAAATAAGCACAAGACTTTCATTCACACCACTGTGGCGTTACCGCATACCATTCATTTGTAGTTGCAACACG
TCCCCTAATGGCCTATCCACCATTGCCAAATGCAAAGTCCTCCTGAAAAAATGTCTGAAATTTCAAAAAATTCAGAAATCCCAATCACCCAAGAATGGAAAAGCACAGACAACCACGGATTAAATTCAGGGCCTGACATTGTTGGGTATCTGAAGTACAAAATTACAGAAATTACCAATCAGCCAAGAAGGCCAACAATT
CACAAATCTGAAAATGGCATAGTGTCTGAGCCTCATTGTGGGAATCTGAGTGAAGAAACTGAGAAAAATGGCGGGGATTACAGACAAAATCAACATATACTTGAAAACGAATGCAGTTCAGCGAAGAATAAGCGTTTGTTTGAAGAAGGTGTTGGGGGAGGACTCGCAGAAACTCAAAAGGAGCGGTTGAAGAATTATCT
CAAAGAAAGTGTTGCAGTCATGAACTCAGAAGTGGATGAGATCACGCAACACAAATGGTGCTGGCCATTTACTCAACCTGTTGATGTTGCGGGCTTGAGTTTACGTAACTACTATGATGTAATAAAAAAGCCTATGGACCTGGGAAGCATTAGAGATCGGATGGAGGCAACAGATGGTTCAGGTTACAGTAATGCTCGTG
AAATATATGAAGATGTGAGACTTGTTTTCAGGAATGCAATGATATACAATAAACCAGGGACAGAAGTGTACATGATGGCAAAAGCTCTGTTGGAGAAGTTTGAAGAAAAGTGGAGAAGCATTTTGGAACCAAAACTTATTGAACTGGAAGCAAAAAGGGAGGAGCAGGGTTCTATAGATATTGGTGGGCAGGATTCAGAA
GTAGCTCTGCAAAAATATTCAGATGAAGTCTTTGGAAAGCTCAATAATATCGAACAACAACTGGAAGAATTTCTTGGAGCAGCAACATCCAATACCAGGGCAATGTTAGCAACTGAAAAGAAAGAACTGGTCCGCAGAATTCAGCGCCTTCCATCTAGTGGCCTTAATCGTATTGTAGAGATTATTGCGCAGAGGAATCA
TTCATATGATGTTTCAGCCGAGGAGGTTCAGGTTGATTTGGACAATGAGGATCCTGCAACATTGTGGAGATTGTACATCTATTTGCAGACAGTTAAAAATGCAAGCCATTCTGTTGACAACAGCTAGAATGCCAATTACTTGATAAATGAAAGGCACTCTGTCATGGTGTTGCCACGATGATGACCCAAGTTCAAACCTT
AGCGGGCTCTGGAGCCTTGATCATGTGCATGCGTTTGCAAATTTTGACAACCCACATGTTAAAGTAGACTTTACCACAATAATGCGAAGTGGGGGTTCATACTCAATAGCTCCCTGCAGATCAAACTAAGCATTTACCCTTACCCAAAAAAATGCAAAAGTTGCATGGTCATGACTGCTTTCTTGTCAAATTTGACAAGG
ATTTTTCTTCTTGACTAAATGCGGCAGTCTTTACGAAATTGAACAGTCACCAATGAAATGAAATGAACAATATTCATTACAATTAGACTTATATATATGTAACAATGTTGAATGTGGTAAGCCA
>TRINITY_DN43308_c2_g1_i9 from sample A8 / Example unspliced isoform:CGTTCGATGGTTTAAAAGGGGCCCTTCGCCTGGCTTTGAAAGGCGACTCGGTCGAGGCCGTTTTCTTATACCAATGGCAAAGCCGAACACCCCGAAAATAAAAATTCCTTTCACCATTCGTCGATGTATAAATAAGCACAAGACTTTCATTCACACCACTGTGGCGTTACCGCATACCATTCATTTGTAGTTGCAACACG
TCCCCTAATGGCCTATCCACCATTGCCAAATGCAAAGTCCTCCTGAAAAAATGTCTGAAATTTCAAAAAATTCAGAAATCCCAATCACCCAAGAATGGAAAAGCACAGACAACCACGGATTAAATTCAGGGCCTGACATTGTTGGGTATCTGAAGTACAAAATTACAGAAATTACCAATCAGCCAAGAAGGCCAACAATT
CACAAATCTGAAAATGGCATAGTGTCTGAGCCTCATTGTGGGAATCTGAGTGAAGAAACTGAGAAAAATGGCGGGGATTACAGACAAAATCAACATATACTTGAAAACGAATGCAGTTCAGCGAAGAATAAGCGTTTGTTTGAAGAAGGTGTTGGGGGAGGACTCGCAGAAACTCAAAAGGAGCGGTTGAAGAATTATCT
CAAAGAAAGTGTTGCAGTCATGAACTCAGAAGTGGATGAGATCACGCAACACAAATGGTGCTGGCCATTTACTCAACCTGTTGATGTTGCGGGCTTGAGTTTACGTAACTACTATGATGTAATAAAAAAGCCTATGGACCTGGGAAGCATTAGAGATCGGATGGAGGCAACAGATGGTTCAGGTTACAGTAATGCTCGTG
AAATATATGAAGATGTGAGACTTGTTTTCAGGAATGCAATGATATACAATAAACCAGGGACAGAAGTGTACATGATGGCAAAAGCTCTGTTGGAGAAGTTTGAAGAAAAGTGGAGAAGCATTTTGGAACCAAAACTTATTGAACTGGAAGCAAAAAGGGAGGAGCAGGGTTCTATAGATATTGGTGGGCAGGATTCAGAA
GTAGCTCTGCAAAAATATTCAGATGAAGTCTTTGGAAAGCTCAATAATATCGAACAACAACTGGAAGAATTTCTTGGAGCAGCAACATCCAATACCAGGGCAATGTTAGCAACTGAAAAGAAAGAACTGGTCCGCAGAATTCAGCGCCTTCCATCTAGTGGCCTTAATCGTATTGTAGAGATTATTGCGCAGAGGAATCA
TTCATATGATGTTTCAGCCGAGGAGGTTCAGGTTGATTTGGACAATGAGgtacgtgcccacctttaaacatgaaaatgaaatatattaatctaatcaggaaacataaaacttatcaaaatatatcacaggaaagagaactttggatgtctagtttacatcgtatgataatgggcagattctatcaaattcatcagcctga
taagttgtatggatatttgttctagtaaaattgtcaaaaacacggttgcatatgtcattatctttttcctgttttaattgaactagattagacagctatcaaatattgaactttgagaacattgcagGATCCTGCAACATTGTGGAGA
Intron 6 GTATTCTTCT ... AAGGATCAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 12.59 | 36.6 | 3.6 | 7 |
| A2 | 24.61 | 30.7 | 8.8 | 11 |
| A3 | 20.31 | 33.4 | 10.1 | 7 |
| A4 | 23.4 | 12.1 | 2.3 | 5 |
| A5 | 40 | 11.6 | 5.3 | 10 |
| A6 | 28.95 | 5.1 | 3.2 | 1 |
| A7 | 34.42 | 33.8 | 23.5 | 11 |
| A8 | 23.28 | 50.8 | 12.7 | 18 |
| A9 | 21.8 | 37.7 | 14 | 7 |
| A10 | 27.36 | 50.9 | 15.3 | 23 |
>TRINITY_DN114829_c0_g1_i3 from sample A2 / Example spliced isoformGTATAAATAAGCACAAGACTTTCATTCACACCACTGTGGCGTTACCGCATACCATTCATTTGTATTTGCAACACGTCGCCTAATGGCCTCTCCACCATTGCCAAATGCAAAGTCCTGAAAAAATGTCTGAAATTTCAAAAAATTCAGAAATCCCAATCACCCAAGAATGGAAAAGCACAGACAACCACGGATTAAATTCA
GGGCCTGACATTGTTGGGTATCTGAAGTACAAAATTACAGAAATTACCAATCAGCCAAGAAGGCCAACAATTCACAAATCTGAAAATGGCATAGTGTCTGAGCCTCATTGTGGGAATCTGAGTGAAGAAACTGAGAAAAATGGCGGGGATTACCGACAAAATCAACATATACTTGAAAGCGAATGCAGTTCAGCGAAGTA
TAAGTGTTTGTTTGAAGGAGGTGTTGGGGGAGGACTCGCAGAAACTCAAAAGGAGCGGTTGAAGAATTATCTCAAGGAAAGTGTTGCAGTCATGAACTCAGAAGTGGATGAGATCACGCAACACAAATGGTGCTGGCCATTTACTCAACCTGTTGATGTTGCGGGCTTGAGTTTACGTAACTACTATGATGTAATAAAAA
AGCCTATGGACCTGGGAAGCATTAGAGATCGGATGGAGGCAACAGATGGTTCAGGTTACAGTAATGCTCGTGAAATATATGAAGATGTGAGACTTGTTTTCAGGAATGCAATGATATACAATAAACCAGGGACAGAAGTGTACATGATGGCAAAAGCTCTGTTGGAGAAGTTTGAAGAAAAGTGGAGAAGCATTTTGGAA
CCAAAACTTATTGAACTGGAAGCAAAAAGGGAGGAGCAGGGTTCTATAGATATTGGTGGGCAGGATTCAGAAGTAGCTCTGCAAAAATATTCAGATGAAGTCTTTGGAAAGCTCAATAATATCGAACAACAACTGGAAGAATTTCTTGGAGCAGCAACATCCAATACCAGGGCAATGTTAGCAACTGAAAAGAAAGAACT
GGTCCGCAGAATTCAGCGCCTTCCATCTAGTGGCCTTAATCGTATTGTAGAGATTATTGCGCAGAGGAATCATTCATATGATGTTTCAGCCGAGGAGGTTCAGGTTGATTTGGACAATGAGGATCCTGCAACATTGTGGAGATTGTACATCTATTTGCAGACAGTTAAAAATGCAAGCCATTCTGTTGACAACAGCTAGA
ATGCCAATTACTTGATAAATTAAAGGCACTCTGTCATGGTAATTGTCTGGTGGTGTTTACGATAACATTTTCTATATTTTTACTCATTTTTTAGATGTGGCGGTTATGTCATGCTAACCCTTCTGGTAATGGAGAATTTGGGATGCGAAAGGGACTCATGGAAACATTGTCAAAGTAACCATTTAATTTCCAAATATGAT
TTCTTCTTCAATGAGGTCTAGTGGCTGGTTCAGGAGTTCAGCCAACTTTCATAGATTTAGGCGTTTGTTTGAGATAAGCTCCCAGGGCTTTTAATCCTCTGTACAAAGTTGGCTCAAGAGTCTTCGCTCTTAAATTGTATATATTTGTGCTTTTCAAGAATAATTCGGAAAGTGCAATTTACAGCTGTTTTGGTATTCCA
AGCATACAACAGATGTGTATAATTATTCATTTCAACTTGAATGATGACAGTAGGCAGTAGATGGCATGTTTTGGTTCTGTAATCTAAGATTATTTCCTTGATTTATTTATTTATGGATTTCTTTTAAATATGAACAAGGTGTTGCCACGATGATGA
>TRINITY_DN114829_c0_g1_i2 from sample A2 / Example unspliced isoform:GTATAAATAAGCACAAGACTTTCATTCACACCACTGTGGCGTTACCGCATACCATTCATTTGTATTTGCAACACGTCGCCTAATGGCCTCTCCACCATTGCCAAATGCAAAGTCCTGAAAAAATGTCTGAAATTTCAAAAAATTCAGAAATCCCAATCACCCAAGAATGGAAAAGCACAGACAACCACGGATTAAATTCA
GGGCCTGACATTGTTGGGTATCTGAAGTACAAAATTACAGAAATTACCAATCAGCCAAGAAGGCCAACAATTCACAAATCTGAAAATGGCATAGTGTCTGAGCCTCATTGTGGGAATCTGAGTGAAGAAACTGAGAAAAATGGCGGGGATTACCGACAAAATCAACATATACTTGAAAGCGAATGCAGTTCAGCGAAGTA
TAAGTGTTTGTTTGAAGGAGGTGTTGGGGGAGGACTCGCAGAAACTCAAAAGGAGCGGTTGAAGAATTATCTCAAGGAAAGTGTTGCAGTCATGAACTCAGAAGTGGATGAGATCACGCAACACAAATGGTGCTGGCCATTTACTCAACCTGTTGATGTTGCGGGCTTGAGTTTACGTAACTACTATGATgtattcttct
ctttgtgcccacctcactcttccattcatatgcacaaaaagcaagaacactaacatggcatttgcagttaaggatcaagGTAATAAAAAAGCCTATGGACCTGGGAAGCATTAGAGATCGGATGGAGGCAACAGATGGTTCAGGTTACAGTAATGCTCGTGAAATATATGAAGATGTGAGACTTGTTTTCAGGAATGCAA
TGATATACAATAAACCAGGGACAGAAGTGTACATGATGGCAAAAGCTCTGTTGGAGAAGTTTGAAGAAAAGTGGAGAAGCATTTTGGAACCAAAACTTATTGAACTGGAAGCAAAAAGGGAGGAGCAGGGTTCTATAGATATTGGTGGGCAGGATTCAGAAGTAGCTCTGCAAAAATATTCAGATGAAGTCTTTGGAAAG
CTCAATAATATCGAACAACAACTGGAAGAATTTCTTGGAGCAGCAACATCCAATACCAGGGCAATGTTAGCAACTGAAAAGAAAGAACTGGTCCGCAGAATTCAGCGCCTTCCATCTAGTGGCCTTAATCGTATTGTAGAGATTATTGCGCAGAGGAATCATTCATATGATGTTTCAGCCGAGGAGGTTCAGGTTGATTT
GGACAATGAGGATCCTGCAACATTGTGGAGATTGTACATCTATTTGCAGACAGTTAAAAATGCAAGCCATTCTGTTGACAACAGCTAGAATGCCAATTACTTGATAAATTAAAGGCACTCTGTCATGGTGTTGCCACGATGATGACCCAAGTTCAAACCTTAGCGGGCTTTGGAGCCTTGATCATGTGCATGTGGTGCTG
TGGTCCAGTGATTGAGACAAGGTGTTGCCACGATGATGACCCAAGTTCAAACCTTAGCGGGCTCTGGAGCCTTGATCATGTGCATGCGTTTGCAAATTTTGACAACCCACATGTTAAAGTAGACTTTACCACAATAATGCGAA
Intron 7 GTGATACAGC ... CCAATACCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 84.34 | 13 | 72 | 68 |
| A2 | 79.01 | 17 | 45 | 83 |
| A3 | 72.94 | 23 | 62 | 62 |
| A4 | 80.95 | 10 | 40 | 45 |
| A5 | 77.78 | 5 | 12 | 23 |
| A6 | 74.09 | 25 | 47 | 96 |
| A7 | 78.01 | 53 | 139 | 237 |
| A8 | 79 | 46 | 99 | 247 |
| A9 | 82.7 | 32 | 126 | 180 |
| A10 | 77.55 | 44 | 111 | 193 |
>TRINITY_DN42841_c0_g2_i3 from sample A6 / Example spliced isoformTGAAAGGCTCGGTGACTCGGTCTAGGCCGTATTCTTAGCGATACCAATGGCAAAGCCAAACACCCCGAAAATAAAAATTCCTTTCACCATTCGTCGATGTATAAATAAGCACAAGACTTTCATTCACACCACTGTGGCGTTACCGCATACCATTCATTTGTAGTTGCAACACGTCCCCTAATGGCCTATCCACCATTGCC
AAATGCAAAGTCCTCCTGAAAAAATGTCTGAAATTTCAAAAAATTCAGAAATCCCAATCACCCAAGAATGGAAAAGCACAGACAACCACGGATTAAATTCAGGGCCTGACATTGTTGGGTATCTGAAGTACAAAATTACAGAAATTACCAATCAGCCAAGAAGGCCAACAATTCACAAATCTGAAAATGGCATAGTGTCT
GAGCCTCATTGTGGGAATCTGAGTGAAGAAACTGAGAAAAATGGCGGGGATTACCGACAAAATCAACATATACTTGAAAACGAATGCAGTTCAGCGAAGAATAAGCGTTTGTTTGAAGAAGGTGTTGGGGGAGGACTCGCAGAAACTCAAAAGGAGCGGTTGAAGAATTATCTCAAAGAAAGTGTTGCAGTCATGAACTC
AGAAGTGGATGAGGGCAATGTTAGCAACTGAAAAGAAAGAACTGGTCCGCAGAATTCAGCGCCTTCCATCTAGTGGCCTTAATCGTATTGTAGAGATTATTGCGCAGAGGAATCATTCATATGATGTTTCAGCCGAGGAGGTTCAGGTTGATTTGGACAATGAGGATCCTGCAACATTGTGGAGATTGTACATCTATTTG
CAGACAGTTAAAAATGCAAGCCATTCTGTTGACAACAGCTAGAATGCCAATTACTTGATAAATTAAAGGCACTCTGTCATGGTAATTGTCTGGTGGTGTTTACGATAACATTTTCTATATTTTTACTCATTTTTTAGATGTGGCGGTTATGTCATGCTAACCCTTCTGGTAATGGAGAATTTGGGATGCGAAAGGGACTC
ATGGAAACATTGTCAAAGTAACCATTTAATTTCCAAATATGATTTCTTCTTCAATGAGGTCTAGTGGCTGGTTCAGGAGTTCAGCCAACTTTCATAGATTTAGGCGTTTGTTTGAGATAAGCTCCCAGGGCTTTTAATCCTCTGTACAAAGTTGGCTCAAGAGTCTTCGCTCTTAAATTGTATATATTTGTGCTTTTCAA
GAATAATTCGGAAAGTGCAATTTACAGCTGTTTTGGTATTCCAAGCATACAACAGATGTGTATAATTATTCATTTCAACTTGAATGATGACAGTAGGCAGTAGATGGCACGTTTTGGTTCTGTAATCTAAGATTATTTCCTTGATTTATTTATTTATG
>TRINITY_DN42841_c0_g2_i2 from sample A6 / Example unspliced isoform:TGAAAGGCTCGGTGACTCGGTCTAGGCCGTATTCTTAGCGATACCAATGGCAAAGCCAAACACCCCGAAAATAAAAATTCCTTTCACCATTCGTCGATGTATAAATAAGCACAAGACTTTCATTCACACCACTGTGGCGTTACCGCATACCATTCATTTGTAGTTGCAACACGTCCCCTAATGGCCTATCCACCATTGCC
AAATGCAAAGTCCTCCTGAAAAAATGTCTGAAATTTCAAAAAATTCAGAAATCCCAATCACCCAAGAATGGAAAAGCACAGACAACCACGGATTAAATTCAGGGCCTGACATTGTTGGGTATCTGAAGTACAAAATTACAGAAATTACCAATCAGCCAAGAAGGCCAACAATTCACAAATCTGAAAATGGCATAGTGTCT
GAGCCTCATTGTGGGAATCTGAGTGAAGAAACTGAGAAAAATGGCGGGGATTACCGACAAAATCAACATATACTTGAAAACGAATGCAGTTCAGCGAAGAATAAGCGTTTGTTTGAAGAAGGTGTTGGGGGAGGACTCGCAGAAACTCAAAAGGAGCGGTTGAAGAATTATCTCAAAGAAAGTGTTGCAGTCATGAACTC
AGAAGTGGATGAGgtgatacagcaagttcttcaagtgtctcacatgcacacaagcctgaaaaggaaaaggtcaagggctattatttcttcaaaaaatgatgaaacagagaaaagtagtaagaaacaaagaatgctatttttagctcgttcggaggctgctcatagaaggagtatggcagatattttgcgacagttcggtt
ctattctcaaacagatcacgcaacacaaatggtgctggccatttactcaacctgttgatgttgcgggcttgagtttacgtaactactatgatgtaataaaaaagcctatggacctgggaagcattagagatcggatggaggcaacagatggttcaggttacagtaatgctcgtgaaatatatgaagatgtgagacttgtt
ttcaggaatgcaatgatatacaataaaccagggacagaagtgtacatgatggcaaaagctctgttggagaagtttgaagaaaagtggagaagcattttggaaccaaaacttattgaactggaagcaaaaagggaggagcagggttctatagatattggtgggcaggattcagaagtagctctgcaaaaatattcagatga
agtctttggaaagctcaataatatcgaacaacaactggaagaatttcttggagcagcaacatccaataccagGGCAATGTTAGCAACTGAAAAGAAAGAACTGGTCCGCAGAATTCAGCGCCTTCCATCTAGTGGCCTTAATCGTATTGTAGAGATTATTGCGCAGAGGAATCATTCATATGATGTTTCAGCCGAGGAGG
TTCAGGTTGATTTGGACAATGAGGATCCTGCAACATTGTGGAGATTGTACATCTATTTGCAGACAGTTAAAAATGCAAGCCATTCTGTTGACAACAGCTAGAATGCCAATTACTTGATAAATTAAAGGCACTCTGTCATGGTAATTGTCTGGTGGTGTTTACGATAACATTTTCTATATTTTTACTCATTTTTTAGATGT
GGCGGTTATGTCATGCTAACCCTTCTGGTAATGGAGAATTTGGGATGCGAAAGGGACTCATGGAAACATTGTCAAAGTAACCATTTAATTTCCAAATATGATTTCTTCTTCAATGAGGTCTAGTGGCTGGTTCAGGAGTTCAGCCAACTTTCATAGATTTAGGCGTTTGTTTGAGATAAGCTCCCAGGGCTTTTAATCCT
CTGTACAAAGTTGGCTCAAGAGTCTTCGCTCTTAAATTGTATATATTTGTGCTTTTCAAGAATAATTCGGAAAGTGCAATTTACAGCTGTTTTGGTATTCCAAGCATACAACAGATGTGTATAATTATTCATTTCAACTTGAATGATGACAGTAGGCAGTAGATGGCACGTTTTGGTTCTGTAATCTAAGATTATTTCCT
TGATTTATTTATTTATG