NA ----> NA

Intron 1 GTGAACACAA ... ATGTGAGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	73.4	21.6	33.6	57.8
A2	68.75	34.8	57.2	74
A3	70.63	22.2	46.8	49.6
A4	75.21	16.8	26	50
A5	59.89	20.6	23.6	29
A6	67.01	25.2	39.6	48
A7	67.45	90.2	106.2	180
A8	69.63	47.2	59.6	105
A9	74	65.2	85.8	182.6
A10	75.44	49.6	60.6	149.6

>TRINITY_DN117896_c2_g2_i3 from sample A1 / Example spliced isoform

CGGATGCAAACATTACACAACAAAAAGAAAAACAGTAAACAAGGGGAATCTACTTGTGCAGTTCGATCCAGCTACCGCAGAGAATATTGGAGCTTGGATTTCGTTCGACGTCGTCTTTTCCCCACATTTTCTAGGTTTGCAGCACGGCGAATTCCTAGATGCAATAAGAAACATGAAATTGATGGCAGATGTGCTCAAGT
TCATCGATCACCTTTGTCAGTATGTGCTGATGAGATAGAATACAAACATAATTCTTCATCAGGAGAGGAGTATAGTACTGAGGATGAAGATGGCGACACTGACAACGATGAGGAGATCGCTGAACACCTAGCAAAAGCTATGAAAGTTTATCTACCTGAAGTCCTAAACAGACAGTGAGTGCTTTATCGTATCTGTCTCC
CTTGGGTGACTGTTTTGGATGGC

>TRINITY_DN117896_c2_g2_i5 from sample A1 / Example unspliced isoform:

CGGATGCAAACATTACACAACAAAAAGAAAAACAGTAAACAAGGGGAATCTACTTGTGCAGTTCGATCCAGCTACCGCAGAGAATATTGGAGCTTGGATTTCGTTCGACGTCGTCTTTTCCCCACATTTTCTAGGTTTGCAGCACGGCGAATTCCTAGATGCAATAAGgtgaacacaaacaaatttaaacaaaggagatt
agtatgggcaggatagttggggaagatggggatatccttcttttaaataaaacttgcaatgatttggaggaaaattatagttttggtgaacacaataagaagaccaatggttatctgaaaacatgtgagcagAAACATGAAATTGATGGCAGATGTGCTCAAGTTCATCGATCACCTTTGTCAGTATGTGCTGATGAGAT
AGAATACAAACATAATTCTTCATCAGGAGAGGAGTATAGTACTGAGGATGAAGATGGCGACACTGACAACGATGAGGAGATCGCTGAACACCTAGCAAAAGCTATGAAAGTTTATCTACCTGAAGTCCTAAACAGACAGCATCAATTACGACTACAAGTCAAGCATGTAGAAGATTTTGGAATCACTTTCAAGATAAAAG
ATTCGAGTGTCGCGGCGGATACTGTTTTGGAAACCCCGCAAAGCAAATGTTTGTCGAAAACATCAGAGGAAAACATATCTTGGGCACCTAAAATACATTTCACTTTGTCTACCGTCCAAAGTGAATGTGATAGGGGGAAAGCTATTATTCAACCAGGTCGAATGTTGAACAAACATTCCATGGAAGCCACAGCATGGAAA
AATGAAAAGCAGCTTCAGGATGGACTATTAGTTCCACCAAGAGATCCAAAAAAAATGAATAAATTGGCTAGAAAGCAAGTCAAAGACACTTTAGGGGATAAATGGTTTGACATGCCAGCACAAACAATCACTCCTGAATTAAAGAAAGATCTTCAATTATTGAAGTTGAGAAACGTTGTTGATCCTAAAAGACATTACAA
GGCAGATGATGCAAAAGGCCTCCCCAAGTATTTTCAGGTAGGGACTGTCATAGAACCTGCTGCGGAGTACTACTCAGGAAGGCTGACAAAGAAAGAGCGTAAACCAACTATTGCAGATGAACTTCTTTCTGATTCTGCTTTTCAGCAATATAGGAAGCGCAAGCATTTGGAGATTGAAAGAGTGAATAATCCTGTTGGTA
GACTTCGGTCGAGGCACAAAAAGAATCACCATAAGCGCAGAATGTAAATTTGTAGCAGGAACTAGTATTACGGCCTATCTTATGTTATGTTATTCTTCAAACATCATTTAAAGGAACAAAATGGATGGGGAAATTTTTTGCTTAGCGATAATCTCAACTACATCTATTGCTGTTGTGAAGTATAGCGTGATTCATGTATG
TGATCTAGTATCTCGAAAGCACATTGAATGAATGTGCTTGTTGTTTATGATGACAAAGACATGCTATCGTGATAAATGCCCTTGGCATTTATTGCTTTCTAGAGTAGATGGATACTTTAATGTCTATTCAAAAGAAATTTTATTGTCTAATTTCTTATGTTGGTAGTCATGTCAATCTAGCTGTTTCTTTTATCCTTATG
TAGAAGTCATATATGTATGTGAATTGTATTTTAGGTTTATTTCTTCTTACATTTAGATAAGTTGTGGGTTTGTTCAACAAATTTTTGTTGTTAAAGCATTTGCTCAAGTTGGGTATGTAAATGCTAGAATATATGCATCAGCTGAAGTTGTAAATCACATTGTTGTTGATATGAATGTTACAACTTTCAAATCTTCAATA
AATTTGAGGATGGCAGTGGAGCCAG