sp|Q9SCN8|CD48D_ARATH ----> Cell division control protein 48 homolog D
Intron 1 GTCTTACGAA ... TTCTGTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 32.53 | 28 | 8 | 19 |
| A2 | 29.87 | 27 | 12 | 11 |
| A3 | 29.17 | 17 | 10 | 4 |
| A4 | 21.74 | 27 | 11 | 4 |
| A5 | 26.76 | 26 | 11 | 8 |
| A6 | 22.03 | 46 | 12 | 14 |
| A7 | 21.48 | 53 | 12 | 17 |
| A8 | 21.31 | 24 | 6 | 7 |
| A9 | 23.94 | 27 | 11 | 6 |
| A10 | 23.33 | 23 | 9 | 5 |
>TRINITY_DN125693_c11_g1_i1 from sample A1 / Example spliced isoformCTTTACGGTATGAGTTAACAGGAGGTTTCATAAAAAATGCTTTGTTAAGCTCTTTGCTCTTGGCTATTTCTCGGGATAGCAACAATCCAACCATTCTTGAAGATGATATTATTTCAGGATGCCGGTTACAGATGCGTGGTAGTCTGCAGATGAAGTCATTTACACACAGGGTTGTTCCAAAATATTCAATGGATGAGCTC
GTACTAAGTAGTACTGTGCACAAACGTCTGGAATCTATTGTAAACTTTGAAAAGGCGAGAGCAGTTCTCCTTGGACAATGGGGCTTCCAGCAGGAAAAACTTGGAACTGCATGCCTTTTCTGGGGTCCTCATGGAACTGGCAAGTCTGCCGCGGCAGAGGCAATTGGATTTGAACTGGGTCGCCCTTTAAAGGTGATAAA
CTGTGCGCAACTAGTATCAAGAGAAAACATTGATAAGAAAAGCTCTAGCATTTGCTCAGTGTTTACAGATGCTCGGCTTATGGATGCTGCCCTTGTACTAGAGGACTTTCAGATATTTGGTAATGAAGATGCTTCTTCTAGGGCTGGTATCATGAGTGTTTCAGCCTGGTCAGATTTTGCTATTGGTCTTATTTTACATG
AGCTGGAGCGCTTTCCAGGCATTTGCATCCTTATTGCAAACTTGACACAGGTTTGATAGGTGGACAGAGTTAATTTTATATGTTAGCAATGAGTAGTCTTTTGAATTGGATATCGTGGTAAGATCGATTTCAAATGTGGAAATTTCAGTTGTATAATTACAATAGTATGCCATATTAAAGGTGATATTATAATTATCAAA
TTTATATTGTTGAAGGAAAATCAAAAAAATATTTGCAGTAATTGCATTAGGAGTGAGTAAACTCTAGACAAACCTGCGTGTGACTATAATAGTTCTTTTCAGTTGTAAGTTGCAATTTTTAAACTGCCTTGAATGTTTTAAAGGATACTTGTAAGGAACATAAATCACAATAAGGTTTGATAAACCTGCATATACACAGT
GTATACCAAATATGGGCAAGGAGTACAACTGCCAAAAGTATAATAATGATAAGTTACACAATAACTTATTAGATATTAGGAGCACTCCAAATACCTCAATAGATACAA
>TRINITY_DN125693_c11_g1_i2 from sample A1 / Example unspliced isoform:CTTTACGGTATGAGTTAACAGGAGGTTTCATAAAAAATGCTTTGTTAAGCTCTTTGCTCTTGGCTATTTCTCGGGATAGCAACAATCCAACCATTCTTGAAGATGATATTATTTCAGGATGCCGGTTACAGATGCGTGGTAGTCTGCAGATGAAGTCATTTACACACAGGGTTGTTCCAAAATATTCAATGGATGAGCTC
GTACTAAGTAGTACTGTGCACAAACGTCTGGAATCTATTGTAAACTTTGAAAAGGCGAGAGCAGTTCTCCTTGGACAATGGGGCTTCCAGCAGGAAAAACTTGGAACTGCATGCCTTTTCTGGGGTCCTCATGGAACTGGCAAGTCTGCCGCGGCAGAGGCAATTGGATTTGAACTGGGTCGCCCTTTAAAGGTGATAAA
CTGTGCGCAACTAGTATCAAGAGAAAACATTGATAAGAAAAGCTCTAGCATTTGCTCAGTGTTTACAGATGCTCGGCTTATGGATGCTGCCCTTGTACTAGAGGACTTTCAGgtcttacgaatttcttttgtggagaaaaattatcttgtattacattttcacagagattacttcaagggtcagaccagggggggcacaa
gcctattgatgaagggcgggctactccatcagccctgtcttcaaaatctagagaatccacatatatgatattacttaaggacttcaatccggtacagatcagcataattggttcatgattagtagctgaaagttctggtaggataagaggggtggacttaacatacaaagtgacctgactggtcttttccacaggaatta
tagggctgtatgggaaatatctccgcaaacctcacttcatcccacattttctcccaattatcatagactctcctctttccttgaagaataaaagttggaataaattgtttatttttcttgtttgaactttatctagggtttggttttttccattgtgactatttacattctgtgcagATATTTGGTAATGAAGATGCTTC
TTCTAGGGCTGGTATCATGAGTGTTTCAGCCTGGTCAGATTTTGCTATTGGTCTTATTTTACATGAGCTGGAGCGCTTTCCAGGCATTTGCATCCTTATTGCAAACTTGACACAGGTTTGATAGGTGGACAGAGTTAATTTTATATGTTAGCAATGAGTAGTCTTTTGAATTGGATATCGTGGTAAGATCGATTTCAAAT
GTGGAAATTTCAGTTGTATAATTACAATAGTATGCCATATTAAAGGTGATATTATAATTATCAAATTTATATTGTTGAAGGAAAATCAAAAAAATATTTGCAGTAATTGCATTAGGAGTGAGTAAACTCTAGACAAACCTGCGTGTGACTATAATAGTTCTTTTCAGTTGTAAGTTGCAATTTTTAAACTGCCTTGAATG
TTTTAAAGGATACTTGTAAGGAACATAAATCACAATAAGGTTTGATAAACCTGCATATACACAGTGTATACCAAATATGGGCAAGGAGTACAACTGCCAAAAGTATAATAATGATAAGTTACACAATAACTTATTAGATATTAGGAGCACTCCAAATACCTCAATAGATACAA