NA ----> NA
Intron 1 GTGTTCAAAC ... CTTTTGGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 41.67 | 7 | 4 | 6 |
| A2 | 30.16 | 22 | 10 | 9 |
| A3 | 25 | 6 | 1 | 3 |
| A4 | 42.86 | 8 | 8 | 4 |
| A5 | 28 | 9 | 5 | 2 |
| A6 | 33.33 | 6 | 2 | 4 |
| A7 | 25.49 | 19 | 4 | 9 |
| A8 | 33.33 | 16 | 2 | 14 |
| A9 | 23.08 | 30 | 8 | 10 |
| A10 | 17.65 | 14 | 1 | 5 |
>TRINITY_DN43870_c0_g1_i2 from sample A7 / Example spliced isoformAAAAAAAGGAACCTCTCCAAAAGATACCAAACCCGCTTGCCGGGGCCAACCTTGGGAAAGTACAGATCTCAACCCAAAAAGAGTAATCCTCAGATTCGAAGAAGATAACAATTTGAAATGAAAAGTGTTCTTTGATTGTCGAGATGAAAAGAACAGAAAAGTAAAGTCAAGTCAAGTCAATCAGTAGGATTACATTTTAG
TTGAAGAGTAATGGATAAAAAGTTCGTATTTCCGGAAGGCCAGATTCCACAGTTATTCTTGTGAAGCCACCCATCGGGTTTGTGTGCAGAGGAAAACGGAAGCCGGGAAAGAACATTGTCGTGCTGCGATTTGAGCGTGGAGATCGTACGAAGAAGGGAATCAATGATCTCGTCTTTGTCTGTTTCTCGTTTTAACAGTG
AAGAAGTTACCCTAACCCACGCAGTCGGTGAAAGAAGCATCTGAATTCGCCTGTGAGAGAGATATCAGTCTGGTTGATGTCAATTCTTTTTTTTGGAGAGTGGGATCGATGTTAATTTCAGATCAGATTGGCACGGTATGACAGTGTTCGGAAGTGCAGTGAACAAGAAACAAACAGAGGGAAGAATGCAGTACTGAGAT
CACAGAATAGCATTTGTCCAGAGTTCAGAAAAACCGACATTGAGGGTTAAGTGGAAAACAGAGAACTAGAAATGGGATTCAGTAAAACTGAAATACAATTAAGACGCTTGCTTGCTTCTGCTCCTAATCAGGAGAATCAAGCTAAGCTCATACACTATGTTGCAACATTACGGGAGCTGCTAGCACAATTGACTGGAGAG
AGTACACCAGGAGGCTTACCAAGTATATCGACATCACAAGCTAAGGAATATGTCGAGAAAATTGACACTCTTGCAGCAAAAATAGGTTCCGATCCTCTGTTAGAAGCATCAGAGTGCTCAAAAGTGTCAGATATTAATCAAATCAAAGATGTGCCTAAGCGGGAAGGGAAACAAATTGCAGATGAAGTAATCTTAGCTTC
TACATCTTCAACTCCAGTACTAAGAAAGAGGCACATATATAATAACGAGGAGCAAAGTAAAAGTCAAGAGGGTGTGACTGCCAAGACTGAGTCACCAATAAAACTGGATGCGCCATCTCAAAGGCACATTGAAAAGCACAGGAAACTGCAGGAGGATTTAACAGATGAAATGGTTGGTTTAGCTCAACAACTTAAGGAGA
CCAGTCTCATGATGAATCAATCTTTGCTCGACACTGAAAAGATTCTTGGTTCTACAGAGCAGGCAGTAGACCACAGTCTAGCAAGTACAAATAATGTAAATGAGCGAGCTGGGCTAATCTATTCACAAAGCTTCAAAACCAGTTGCATCTCTTGGCTTATCATATTTATCATGAGTTGCATGTTCCTACTAGTTGTTTTG
TTGATCCGCATAACTTGATGGGTTCAAGAAATGCACGTATGTTTCTTGTTCATAGTTTGTAGAAGGCCATATGTATTGTATGCTTCTTTAAACCTGTTTAAGGCAATTGAGGTTATATATTAAATGTATGAAAAATTCTCAAAAGTTGTTTCCTGATAATAATAACTCATGATCGTTTGAATAATATAAATCTGGGCACA
ATACTCTGAAAAAACATGGATACGAGTTTGTACAAAAAAAATCTGTGGTTGAATTTTTATTTTGTGGAAGAATTGTCCATTATTAT
>TRINITY_DN43870_c0_g1_i1 from sample A7 / Example unspliced isoform:AAAAAAAGGAACCTCTCCAAAAGATACCAAACCCGCTTGCCGGGGCCAACCTTGGGAAAGTACAGATCTCAACCCAAAAAGAGTAATCCTCAGATTCGAAGAAGATAACAATTTGAAATGAAAAGTGTTCTTTGATTGTCGAGATGAAAAGAACAGAAAAGTAAAGTCAAGTCAAGTCAATCAGTAGGATTACATTTTAG
TTGAAGAGTAATGGATAAAAAGTTCGTATTTCCGGAAGGCCAGATTCCACAGTTATTCTTGTGAAGCCACCCATCGGGTTTGTGTGCAGAGGAAAACGGAAGCCGGGAAAGAACATTGTCGTGCTGCGATTTGAGCGTGGAGATCGTACGAAGAAGGGAATCAATGATCTCGTCTTTGTCTGTTTCTCGTTTTAACAGTG
AAGAAGTTACCCTAACCCACGCAGTCGGTGAAAGAAGCATCTGAATTCGCCTGTGAGAGAGgtgttcaaacaacagcactacttttttgggttttctataatttgaagaaaattctgtttgtgagaaagtctgtaattatccatgatttccaaaagtatcgaattttccttttggcagATATCAGTCTGGTTGATGTCAA
TTCTTTTTTTTGGAGAGTGGGATCGATGTTAATTTCAGATCAGATTGGCACGGTATGACAGTGTTCGGAAGTGCAGTGAACAAGAAACAAACAGAGGGAAGAATGCAGTACTGAGATCACAGAATAGCATTTGTCCAGAGTTCAGAAAAACCGACATTGAGGGTTAAGTGGAAAACAGAGAACTAGAAATGGGATTCAGT
AAAACTGAAATACAATTAAGACGCTTGCTTGCTTCTGCTCCTAATCAGGAGAATCAAGCTAAGCTCATACACTATGTTGCAACATTACGGGAGCTGCTAGCACAATTGACTGGAGAGAGTACACCAGGAGGCTTACCAAGTATATCGACATCACAAGCTAAGGAATATGTCGAGAAAATTGACACTCTTGCAGCAAAAAT
AGGTTCCGATCCTCTGTTAGAAGCATCAGAGTGCTCAAAAGTGTCAGATATTAATCAAATCAAAGATGTGCCTAAGCGGGAAGGGAAACAAATTGCAGATGAAGTAATCTTAGCTTCTACATCTTCAACTCCAGTACTAAGAAAGAGGCACATATATAATAACGAGGAGCAAAGTAAAAGTCAAGAGGGTGTGACTGCCA
AGACTGAGTCACCAATAAAACTGGATGCGCCATCTCAAAGGCACATTGAAAAGCACAGGAAACTGCAGGAGGATTTAACAGATGAAATGGTTGGTTTAGCTCAACAACTTAAGGAGACCAGTCTCATGATGAATCAATCTTTGCTCGACACTGAAAAGATTCTTGGTTCTACAGAGCAGGCAGTAGACCACAGTCTAGCA
AGTACAAATAATGTAAATGAGCGAGCTGGGCTAATCTATTCACAAAGCTTCAAAACCAGTTGCATCTCTTGGCTTATCATATTTATCATGAGTTGCATGTTCCTACTAGTTGTTTTGTTGATCCGCATAACTTGATGGGTTCAAGAAATGCACGTATGTTTCTTGTTCATAGTTTGTAGAAGGCCATATGTATTGTATGC
TTCTTTAAACCTGTTTAAGGCAATTGAGGTTATATATTAAATGTATGAAAAATTCTCAAAAGTTGTTTCCTGATAATAATAACTCATGATCGTTTGAATAATATAAATCTGGGCACAATACTCTGAAAAAACATGGATACGAGTTTGTACAAAAAAAATCTGTGGTTGAATTTTTATTTTGTGGAAGAATTGTCCATTAT
TAT