sp|Q9M1W4|HMT2_ARATH ----> Homocysteine S-methyltransferase 2
Intron 1 GTCAGCCCGT ... TGGAGTACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 64.13 | 33 | 10 | 59 |
| A2 | 72 | 28 | 31 | 72 |
| A3 | 61.17 | 40 | 25 | 63 |
| A4 | 60 | 48 | 18 | 72 |
| A5 | 62.67 | 28 | 19 | 47 |
| A6 | 69.16 | 99 | 71 | 222 |
| A7 | 65.06 | 116 | 70 | 216 |
| A8 | 67.35 | 64 | 39 | 132 |
| A9 | 68.34 | 98.2 | 75.7 | 212 |
| A10 | 64.77 | 99 | 56 | 182 |
>TRINITY_DN87446_c0_g1_i2 from sample A2 / Example spliced isoformCGCTCTTGGGCCTTTCGAGTCAAGAGGCCTTATCGAGCTGAGTAAGTCATGAAAAATAAGCAAACAAGTAAAGAAAAATACGTGGAGGATGAGGCTTTCTGGTCAAGAGGCCTTATCGAGCGGTTTTAGAAATTTAACAGGATTTATCATGCAATATGAGTAGGTAGTAGTGTAGACACGATAGAAAAAGATAAGCTCCT
ACTGAGTCGGATAGTTGTCATTCAAAACTACATCAAATACTAAAATAAAAAAAAATATTCGAATGCGTGTTGTTGGATGAATCTGAAATCCATCCCCATCGAATACTAAATATTCGTATGCGTTCGAATACTAAATATTCGTATGCGTGTTGTTGGATGCATCTGGAATCCATCCTTATCAATGCTATTTAGTGGGTGCT
GGTGACGGGTGACAACACACTACGCCTATCTTCACACAACCTGCGAAATGTTCGCGAAACGTGAGCAAGCAAGCAGCACTAACAGCCTTCGTATCTGCAGGCCCTGAAAACTAGATATGTATCTGACAAATGGCATGTCAGTCTTTATCATCCAGAGATAGTGGGCTTTGGGAATACGCACACCTCCTTGTCTAATGAAG
TTTTTTCACCTTTTTAATTATTGGGCTTTTGTCTGGAGAGATCTGTGATCAAAAGAACCAAGTTGTGTGCAGTTTTTGGTGAGCAATGAAGTTCGGAAGTGGAGAAGGGATGAAGGTGATGGAAGAGTTCTTGCAGCAGGTGGGAGGCTTCGGTGTTCTCGATGGAGGCCTGGCCACGCAGTTAGAGTCCCATGGTGCGG
ATCTTAACGATCCTTTATGGAGCGCCAGGTGCTTGATTGAATCTCCACATCTCATTCGGGAGGTTCACCGAGAATATCTTGAAGCTGGTGCAGAGATCATAATCACGGCATCATACCAAGCAACTATTCAAGGCTTTGAATCAAAAGGCTTATCTATAACAGAGGGAGAGGCTCTGTTGCGCAGGAGTGTCGAGATTGCC
TGTGAAGCACGTGAACAGTTTTGGGAGAAGTGTGCAGAACTTTTAAACGGTAGCGATGATCATGCTCAAATTCCAAAAGTTAGACCTATATTAGTGGCAGCCTCTGTGGGAAGTTATGGGGCTTACCTGGCAGATGGTTCTGAATACAGTGGTGATTATGGACCTGGAATGACAGTAGATTCTTTAAAAGATTTCCATCG
AAGACGAGTGCAAGTTCTTGCAGATTCCGGAGCTGATTTAATAGCTTTTGAAACAATACCAAACAAGTTGGAGGCTCAGGCTTACATTGAATTGCTTGAAGAAAGTGATATCCAAATACCAGCTTGGTTTTCCTTCAACTCCAAAGATGGTGTGAATGTAGTTAGTGGAGACTCCATCACAGATTGTGCTACCTTAGCTG
ATTCGTGTACAAATGTGGTTGCTGTTGGCATCAATTGTACCCCACCTCGTTTTATTCATGGACTGATCCTTTCCATTCAGAAGGTCACTACGAAGCCTATACTTGTCTATCCAAATAGCGGAGAAACATATGATGCTGATAGAAAGCAATGGGTGGCATCTACTGGAGTATCCGATGTTGATTTTGTTTCTTACGTACAA
AAGTGGCACGAAATTGGAGCCTCACTCATAGGTGGGTGCTGCAGAACAACCCCAAATACCATTGAAGCAATTTCAAGGGCTATGAACAAGAAACATCAAATTCTACTCCCCACAGAATGCTTGACGAACAATTAAATATAGTGGTGTGTTTATTATTTAAATGGAAACTGACAATCAGTGTAAATATTTTGTGAGCTCTC
TGAGTTTAGTTCAAACCAAAACATTAGTATCTCGTTCATATGAGTAGCTTTTGCCATAATAGTGGCGGTCTAATTTCTTAAAAATTGCACTGTACGTAGATATTGCAGAAATTTAACGTCTTACTTTTCCGAATGCC
>TRINITY_DN87446_c0_g1_i1 from sample A2 / Example unspliced isoform:CGCTCTTGGGCCTTTCGAGTCAAGAGGCCTTATCGAGCTGAGTAAGTCATGAAAAATAAGCAAACAAGTAAAGAAAAATACGTGGAGGATGAGGCTTTCTGGTCAAGAGGCCTTATCGAGCGGTTTTAGAAATTTAACAGGATTTATCATGCAATATGAGTAGGTAGTAGTGTAGACACGATAGAAAAAGATAAGCTCCT
ACTGAGTCGGATAGTTGTCATTCAAAACTACATCAAATACTAAAATAAAAAAAAATATTCGAATGCGTGTTGTTGGATGAATCTGAAATCCATCCCCATCGAATACTAAATATTCGTATGCGTTCGAATACTAAATATTCGTATGCGTGTTGTTGGATGCATCTGGAATCCATCCTTATCAATGCTATTTAGTGGGTGCT
GGTGACGGGTGACAACACACTACGCCTATCTTCACACAACCTGCGAAATGTTCGCGAAACGTGAGCAAGCAAGCAGCACTAACAGCCTTCGTATCTGCAGGCCCTGAAAACTAGATATGTATCTGACAAATGGCATGTCAGTCTTTATCATCCAGAGATAGTGGGCTTTGGGAATACGCACACCTCCTTGTCTAATGAAG
TTTTTTCACCTTTTTAATgtcagcccgtatcttttctaaaaccccatttatttcttcttccaaggccatagtcttcgctaaaatttgcactgatacattttttgcgtggagtacagTATTGGGCTTTTGTCTGGAGAGATCTGTGATCAAAAGAACCAAGTTGTGTGCAGTTTTTGGTGAGCAATGAAGTTCGGAAGTGG
AGAAGGGATGAAGGTGATGGAAGAGTTCTTGCAGCAGGTGGGAGGCTTCGGTGTTCTCGATGGAGGCCTGGCCACGCAGTTAGAGTCCCATGGTGCGGATCTTAACGATCCTTTATGGAGCGCCAGGTGCTTGATTGAATCTCCACATCTCATTCGGGAGGTTCACCGAGAATATCTTGAAGCTGGTGCAGAGATCATAA
TCACGGCATCATACCAAGCAACTATTCAAGGCTTTGAATCAAAAGGCTTATCTATAACAGAGGGAGAGGCTCTGTTGCGCAGGAGTGTCGAGATTGCCTGTGAAGCACGTGAACAGTTTTGGGAGAAGTGTGCAGAACTTTTAAACGGTAGCGATGATCATGCTCAAATTCCAAAAGTTAGACCTATATTAGTGGCAGCC
TCTGTGGGAAGTTATGGGGCTTACCTGGCAGATGGTTCTGAATACAGTGGTGATTATGGACCTGGAATGACAGTAGATTCTTTAAAAGATTTCCATCGAAGACGAGTGCAAGTTCTTGCAGATTCCGGAGCTGATTTAATAGCTTTTGAAACAATACCAAACAAGTTGGAGGCTCAGGCTTACATTGAATTGCTTGAAGA
AAGTGATATCCAAATACCAGCTTGGTTTTCCTTCAACTCCAAAGATGGTGTGAATGTAGTTAGTGGAGACTCCATCACAGATTGTGCTACCTTAGCTGATTCGTGTACAAATGTGGTTGCTGTTGGCATCAATTGTACCCCACCTCGTTTTATTCATGGACTGATCCTTTCCATTCAGAAGGTCACTACGAAGCCTATAC
TTGTCTATCCAAATAGCGGAGAAACATATGATGCTGATAGAAAGCAATGGGTGGCATCTACTGGAGTATCCGATGTTGATTTTGTTTCTTACGTACAAAAGTGGCACGAAATTGGAGCCTCACTCATAGGTGGGTGCTGCAGAACAACCCCAAATACCATTGAAGCAATTTCAAGGGCTATGAACAAGAAACATCAAATT
CTACTCCCCACAGAATGCTTGACGAACAATTAAATATAGTGGTGTGTTTATTATTTAAATGGAAACTGACAATCAGTGTAAATATTTTGTGAGCTCTCTGAGTTTAGTTCAAACCAAAACATTAGTATCTCGTTCATATGAGTAGCTTTTGCCATAATAGTGGCGGTCTAATTTCTTAAAAATTGCACTGTACGTAGATA
TTGCAGAAATTTAACGTCTTACTTTTCCGAATGCC