sp|Q9XGJ4|GGM13_GNEGN ----> MADS-box protein GGM13
Intron 1 GTAAGGTTTT ... TGTTAAACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 78.97 | 1.5 | 8 | 3 |
| A2 | 48.53 | 8.5 | 6 | 10 |
| A3 | 18.34 | 4.5 | 2 | 0 |
| A4 | 0 | 4 | 0 | 0 |
| A5 | 33.33 | 2 | 2 | 0 |
| A6 | 18.52 | 18.5 | 4 | 4 |
| A7 | 15.74 | 21.5 | 5 | 3 |
| A8 | 16.95 | 22.5 | 6 | 3 |
| A9 | 7.48 | 26 | 4 | 0 |
| A10 | 22.5 | 10.5 | 6 | 0 |
>TRINITY_DN88537_c0_g1_i2 from sample A2 / Example spliced isoformTCAAGAAAATCATGTACAGGCACATGAGGGGCGAGGGCGAGGGCGAGGGCGAGGACATCAATTCGTTGAAGTTTTCGGAGTTCTTCTCTTTTGAACAACAGTTTGAAGACAAGCAATTCAAGTTGAAAGAAGAAAAAAATCCTGTTTTAGAGAATGAAAAAGCAAAAGCAAGCGAAGGAACAAGCTGCGATTTGTGAAAG
AAAACACCATTCTACAGTTACCTGTAGAGCAGCATCACGGACATATGGAAGAGAATAGCGGAACACGTTACTCTTTTTCATGCGACACTACCTGGTCTGCAGTGAACTCAATGGAACTTGCAGAGGGATTTAATATTCCATGCCATAGCAGTTACACTAAACATTACTTATTATCGTATTTTCATATGTAAACGACTTTT
ATGAATGATTACTATCTCAAGGACCTTCTTCT
>TRINITY_DN88537_c0_g1_i1 from sample A2 / Example unspliced isoform:TCAAGAAAATCATGTACAGGCACATGAGGGGCGAGGGCGAGGGCGAGGGCGAGGACATCAATTCGTTGAAGTTTTCGGAGTTCTTCTCTTTTGAACAACAGTTTGAAGACAAGCAATTCAAGTTGAAAGAAGAAAAAgtaaggttttgctccaattttaaaatattcgttaaaatactgattttcttaaagaaaagtaaa
agtgatttaagaatgtttctgttaaatcttttcaaacacagaaactaaaaatttaaatcaagtcaagtgatttctaatactctattttgtgatttctaatactcttttttataagatttgataaatgaaattgatcttaaaaaacattaataaccactaccatcatgataaattatttgttaaacagAATCCTGTTTTAG
AGAATGAAAAAGCAAAAGCAAGCGAAGGAACAAGGTACCGTGAACATTCCTTCTATGTATAATTCCATTTTTCATTTTTTTATCTGTAGTTGTATCATATTTAGCTGGGATTTGTTTTAAGATTTGCTTTGTTTTGTTTTGTTAGCTGCGATTTGTGAAAGAAAACACCATTCTACAGTTACCTGTAAGTGTCATATACA
TATTTTTTCACATCCAAAATATGTCTTGCTATTTATGAAGAATCAATGAATTCCTGTGAAGAGTATAACAATATTTTTTCCAACCACCTTATAGTATACAAAAATGTTGACCAAATTTACAAAATATGAATATATATAATGTGAATACTAAGTTAGTATTAGTAACCATAGTGCATTCATTTGTAGGTAGAGCAGCATCA
CG
Intron 2 GTACCGTGAA ... GTTTTGTTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 28.16 | 5 | 2.2 | 1.8 |
| A2 | 51.18 | 8 | 8.8 | 8 |
| A3 | 29.53 | 6 | 2.2 | 3.4 |
| A4 | 9.54 | 6 | 0.8 | 0.6 |
| A5 | 40 | 2 | 0.8 | 2 |
| A6 | 15.4 | 22 | 6 | 2.2 |
| A7 | 17.57 | 16 | 5.2 | 2 |
| A8 | 23.53 | 24 | 8 | 7.4 |
| A9 | 12.09 | 39 | 4.8 | 7 |
| A10 | 16.81 | 12 | 2 | 3.4 |
>TRINITY_DN88537_c0_g1_i2 from sample A2 / Example spliced isoformTCAAGAAAATCATGTACAGGCACATGAGGGGCGAGGGCGAGGGCGAGGGCGAGGACATCAATTCGTTGAAGTTTTCGGAGTTCTTCTCTTTTGAACAACAGTTTGAAGACAAGCAATTCAAGTTGAAAGAAGAAAAAAATCCTGTTTTAGAGAATGAAAAAGCAAAAGCAAGCGAAGGAACAAGCTGCGATTTGTGAAAG
AAAACACCATTCTACAGTTACCTGTAGAGCAGCATCACGGACATATGGAAGAGAATAGCGGAACACGTTACTCTTTTTCATGCGACACTACCTGGTCTGCAGTGAACTCAATGGAACTTGCAGAGGGATTTAATATTCCATGCCATAGCAGTTACACTAAACATTACTTATTATCGTATTTTCATATGTAAACGACTTTT
ATGAATGATTACTATCTCAAGGACCTTCTTCT
>TRINITY_DN88537_c0_g1_i3 from sample A2 / Example unspliced isoform:TCAAGAAAATCATGTACAGGCACATGAGGGGCGAGGGCGAGGGCGAGGGCGAGGACATCAATTCGTTGAAGTTTTCGGAGTTCTTCTCTTTTGAACAACAGTTTGAAGACAAGCAATTCAAGTTGAAAGAAGAAAAAAATCCTGTTTTAGAGAATGAAAAAGCAAAAGCAAGCGAAGGAACAAGgtaccgtgaacattcc
ttctatgtataattccatttttcatttttttatctgtagttgtatcatatttagctgggatttgttttaagatttgctttgttttgttttgttagCTGCGATTTGTGAAAGAAAACACCATTCTACAGTTACCTGTAGAGCAGCATCACGGACATATGGAAGAGAATAGCGGAACACGTTACTCTTTTTCATGCGACACT
ACCTGGTCTGCAGTGAACTCAATGGAACTTGCAGAGGGATTTAATATTCCATGCCATAGCAGTTACACTAAACATTACTTATTATCGTATTTTCATATGTAAACGACTTTTATGAATGATTACTATCTCAAGGACCTTCTTCT
Intron 3 GTAAGTGTCA ... TCATTTGTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 50.79 | 4 | 1 | 4 |
| A2 | 38.3 | 5.5 | 8 | 2.5 |
| A3 | 25.45 | 5.5 | 1 | 2 |
| A4 | 0 | 2.5 | 0 | 0 |
| A5 | 66.66 | 1 | 2 | 1 |
| A6 | 22.82 | 30.5 | 1 | 11.5 |
| A7 | 20.87 | 22.5 | 3 | 8 |
| A8 | 31.37 | 15.5 | 6 | 7.5 |
| A9 | 10.04 | 21.5 | 1 | 2.5 |
| A10 | 18.47 | 12 | 1 | 3.5 |
>TRINITY_DN88537_c0_g1_i2 from sample A2 / Example spliced isoformTCAAGAAAATCATGTACAGGCACATGAGGGGCGAGGGCGAGGGCGAGGGCGAGGACATCAATTCGTTGAAGTTTTCGGAGTTCTTCTCTTTTGAACAACAGTTTGAAGACAAGCAATTCAAGTTGAAAGAAGAAAAAAATCCTGTTTTAGAGAATGAAAAAGCAAAAGCAAGCGAAGGAACAAGCTGCGATTTGTGAAAG
AAAACACCATTCTACAGTTACCTGTAGAGCAGCATCACGGACATATGGAAGAGAATAGCGGAACACGTTACTCTTTTTCATGCGACACTACCTGGTCTGCAGTGAACTCAATGGAACTTGCAGAGGGATTTAATATTCCATGCCATAGCAGTTACACTAAACATTACTTATTATCGTATTTTCATATGTAAACGACTTTT
ATGAATGATTACTATCTCAAGGACCTTCTTCT
>TRINITY_DN88537_c0_g1_i1 from sample A2 / Example unspliced isoform:TCAAGAAAATCATGTACAGGCACATGAGGGGCGAGGGCGAGGGCGAGGGCGAGGACATCAATTCGTTGAAGTTTTCGGAGTTCTTCTCTTTTGAACAACAGTTTGAAGACAAGCAATTCAAGTTGAAAGAAGAAAAAGTAAGGTTTTGCTCCAATTTTAAAATATTCGTTAAAATACTGATTTTCTTAAAGAAAAGTAAA
AGTGATTTAAGAATGTTTCTGTTAAATCTTTTCAAACACAGAAACTAAAAATTTAAATCAAGTCAAGTGATTTCTAATACTCTATTTTGTGATTTCTAATACTCTTTTTTATAAGATTTGATAAATGAAATTGATCTTAAAAAACATTAATAACCACTACCATCATGATAAATTATTTGTTAAACAGAATCCTGTTTTAG
AGAATGAAAAAGCAAAAGCAAGCGAAGGAACAAGGTACCGTGAACATTCCTTCTATGTATAATTCCATTTTTCATTTTTTTATCTGTAGTTGTATCATATTTAGCTGGGATTTGTTTTAAGATTTGCTTTGTTTTGTTTTGTTAGCTGCGATTTGTGAAAGAAAACACCATTCTACAGTTACCTgtaagtgtcatataca
tattttttcacatccaaaatatgtcttgctatttatgaagaatcaatgaattcctgtgaagagtataacaatattttttccaaccaccttatagtatacaaaaatgttgaccaaatttacaaaatatgaatatatataatgtgaatactaagttagtattagtaaccatagtgcattcatttgtagGTAGAGCAGCATCA
CG
Intron 4 GTAATGTTAT ... TCATGTACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 27.78 | 2.7 | 1 | 1 |
| A2 | 31.77 | 5 | 1 | 2 |
| A3 | 10.17 | 6.7 | 0 | 1 |
| A4 | 20.64 | 4.7 | 0 | 2 |
| A5 | 39.39 | 3.3 | 1 | 0 |
| A6 | 5.28 | 19 | 0 | 2 |
| A7 | 12.57 | 14.3 | 0 | 3 |
| A8 | 24.39 | 22 | 5 | 9 |
| A9 | 13.31 | 14.3 | 0.3 | 3 |
| A10 | 38.41 | 9.7 | 3 | 8 |
>TRINITY_DN38116_c0_g1_i2 from sample A8 / Example spliced isoformCAGTGCATACAACGTCCGGTACCTAGTTACAGCTGTTCTTTCCCAAATTGAAGCTACTTTCAGAACTTTCATCTTTTTCATGGGGGGCGTGTTGAATATAGAAATATGTCACCCGTGGTAGCATTCCATTAAAACTTTGAATGAAAAATATTGAGCTGTTGTCCTATATAGACTCATTCTAGGGTTTGCATTTGGCCATT
GAACCAGAGTTGAGGGAGCTGAAGGGTAGGAAGGAATTCCGGTGCTACAAGCAAGAGAAGGGAAGGAAGAGGGAGAGTTGAGATTCCTGGAGGAGGGGAATATCAAGATCAATGGGGAGCAGGGAGATTGAAATAAAGAAGATTGAGAACACAACAAACAGGCAAGTCGCATTCTCCAATAGAAGGGGAGAACTTTTTAA
GAAAGCTAAAGAGCTCTCTATCTTATGCGATGCAGAAGTTGCTGTCATCATTTTATCCAGCACCGGCAAACTCGATGAGTGGTCAAGCTCTAGTATGAAGCATGTTCTGGACAGATACCAGAAATTCAATCAGGGTCTAGGGCTTATGGACTATCAACATCAACAGCTGTTGTGTGAAATGAGACGGATCACCAAAGAAA
ATGAAAGCCTTCAAGCTACTTTAAGGCACATGAGGGGCGAGGGCGAGGGCGAGGGCGAGGACATCAATTCGTTGAAGTTTTCGGAGTTCTTCTCTTTTGAACAACAGTTTGAAGACAAGCAATTCAAGTTGAAAGAAGAAAAAAATCCTGTTTTAGAGAATGAAAAAGCAAAAGCAAGCGAAGGAACAAGCTGCGATTTG
TGAAAGAAAACACCATTCTACAGTTACCTGTAGAGCAGCATCACGGACATATGGAAGAGAATAGCGGAACACGTTACTCTTTTTCATGCGACACTACCTGGTCTGCAGTGAACTCAATGGAACTTGCAGAGGGATTTAATATTCCATGCCATAGCAGTTACACTAAACATTACTTATTATCGTATTTTCATATGTAAACG
ACTTTTATGAATGATTACTATCTCAAGGACCTTCTTCTTAGGGTTTTCACGATTTGTATCTCTCTATGTAGAAGATAGGATTATGCTTGTATATATATTTTTAATATATATGACATCTTTATTTTGAATATTAGAG
>TRINITY_DN38116_c0_g1_i1 from sample A8 / Example unspliced isoform:GCTTATGGACTATCAACATCAACTGTTGTGTGAAATGAGACGGATCACCAAAGAAAATGAAAGCCTTCAAGCTACTTTAAGgtaatgttatttgccatttattgtgcatcatttcaattttcatagggtagattgaacgtaacagttttattaccattcaagaaaatcatgtacagGCACATGAGGGGCGAGGGCGAGGG
CGAGGGCGAGGACATCAATTCGTTGAAGTTTTCGGAGTTCTTCTCTTTTGAACAACAGTTTGAAGACAAGCAATTCAAGTTGAAAGAAGAAAAAGTAAGGTTTTGCTCCAA