sp|Q8W4D6|HC173_ARATH ----> Protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173, chloroplastic
Intron 1 GTAAAGTTTT ... GGCTGCACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 47.37 | 10 | 1 | 9 |
| A2 | 66.67 | 3 | 5 | 6 |
| A3 | 50 | 3 | 0 | 3 |
| A4 | 16.67 | 5 | 0 | 1 |
| A5 | 0 | 2 | 0 | 0 |
| A6 | 18.18 | 9 | 0 | 2 |
| A7 | 28.57 | 20 | 0 | 8 |
| A8 | 26.67 | 11 | 0 | 4 |
| A9 | 26.67 | 11 | 0 | 4 |
| A10 | 11.76 | 15 | 0 | 2 |
>TRINITY_DN102861_c0_g1_i1 from sample A1 / Example spliced isoformGGCAGTTATTATTACATTTACACAATGATATGTGGTTCAAGCGACCTTATCCTACACATTTGAATATGAGCACCATTACAAACTCAATTCCATCAACTCGCCTGAACACAATTCTCAAATCCCAATTCAAAATATGGCTCTGTTCCTGTATTGCATGCATTTATTGCCTTCACACAAATGCAAAGAATCGCGGTTTACAG
TGCTGCAACGCAGAATTGACCGTGCCCAAGCGTTATGGGTAGCAAGCAGCTCATCCAACAACAACAAGAAGAAGCCTGGATCTCTGTCCTTTGGAGAACGTTTGCTGGATTACATTGAAGGAGGACCGAAGCTAAGGAAATGGTACGGGGCACCAGATCAGCTTCCAAGAGATGGAATTGTCGGTAACAAGGATGATAGC
AGTCAAGAACCTGAGCAGGAAACTGTCCCTGAAGTCCGAGATGCCGTGCTAGTTACAGATGGTGATAGCAAAACTGGCCAGCTGGTGATTCTATCATTAATTGTTAAGCGGGCTCGAATCAAGGCACTTGTTAAAGATACGAAAGCTGCAGTTAGTGCCTTTGGTTCATATATCGAGCCTGTAGCTGGAGATATAACAGA
CGACGCTAGTGTCAGGAAAGCATTGAAGGGAGTTTGTTCAATCATATGCACAGAAAAGATGGGCATGTTGACAGAAGCTGAAAATCTCAAAGGAATAGAGCATATCATTCTCTTATCCCAGTTGGCAGTGTTTAGAAGCGGTGGTGGTATTCAAGCATTTATGAATGAAAAAGCTAAAAGATTAGCTGAGGCAGATGAGA
TAGCTGTTATAACATCAGGAGTTTCATACACAATAGTGAGAACAGGTTCATTGCAAGATAAGCCTGGTGGTCAGCGCGGATTCAGCTTCAAAGAGGGTTGTGCTGGGAAAGGAACTCTTAGTAGAGAAGATGCCGCAGCAATTTGTGTTGAGGCACTCTATTCACCTATAAAAGAGGGGCTTATATTTGAGGTGATTAAT
GGGAAAGAGACAGTGCAAAACTGGAACGAACTTTTCAGTTCATTGGCAAACAGTGGCAATCAAGAATGAGAGATATTTTCCTGTGCATACACATAAGAATGGGAAACATCAAGAAAGCACAGTTGGGTACTGTTTAGCAGCACAGTGCTTCTTCATATTGACAAGTATCATATGATATAGGAAACAAAGCAACCACAGTT
CCCAGGATAATTGTAAACCTGATTTCACCATGGATGAAACGCCTGCATGAGGTGATTAAGCCTATATAACATTGTGACTGAACAGGAATTGAGCTCCTGTCCACTAATTGGAACTAAATTCCATCAGTGAACTATGATGACAAACATACTTTGTCTTCCCTTGTCTCTCTCGAGGCTGGGTAGTGAGGGATAAACTCAAG
GATTATTTTATGCCACAGGTCAAACTGATGTTCTTGATCATGTATGCATATTTTCATCTCCAGATATGTTGAACCTTTTAACTTCAAATGCTTAATGGTGCATTTATGGCAAAATAACGGTCATGTG
>TRINITY_DN102861_c0_g1_i2 from sample A1 / Example unspliced isoform:AAGGATGATAGCAGTCAAGgtaaagttttcaatacatgtttgagtatatgccatgcaattgtattataacaagcataaaatgtcatgggtaaaggaaatacttttgaggctgcacagAACCTGAGCAGGAAACTGTCCCTGAAGTCCGAGATGCCGTGCTAGTTACAGATGGTGATAGCAAAACTGGCCAGCTGGTGATT
CTATCATTAATTGTTAAGCGGGCTCGAATCAAGGCACTTGTTAAAGATACGAAAGCTGCAGTTAGTGCCTTTGGTTCATATATCGAGCCTGTAGCTGGAGATATAACAGACGACGCTAGTGTCAGGAAAGCATTGAAGGGAGTTTGTTCAATCATATGCACAGAAAAGATGGGCATGTTGACAGAAGCTGAAAATCTCAA
AGGAATAGAGCATATCATTCTCTTATCCCAGTTGGCAGTGTTTAGAAGCGGTGGTGGTATTCAAGCATTTATGAATGAAAAAGCTAAAAGATTAGCTGAGGCAGATGAGATAGCTGTTATAACATCAGGAGTTTCATACACAATAGTGAGAACAGGTTCATTGCAAGATAAGCCTGGTGGTCAGCGCGGATTCAGCTTCA
AAGAGGGTTGTGCTGGGAAAGGAACTCTTAGTAGAGAAGATGCCGCAGCAATTTGTGTTGAGGCACTCTATTCACCTATAAAAGAGGGGCTTATATTTGAGGTGATTAATGGGAAAGAGACAGTGCAAAACTGGAACGAACTTTTCAGTTCATTGGCAAACAGTGGCAATCAAGAATGAGAGATATTTTCCTGTGCATAC
ACATAAGAATGGGAAACATCAAGAAAGCACAGTTGGGTACTGTTTAGCAGCACAGTGCTTCTTCATATTGACAAGTATCATATGATATAGGAAACAAAGCAACCACAGTTCCCAGGATAATTGTAAACCTGATTTCACCATGGATGAAACGCCTGCATGAGGTGATTAAGCCTATATAACATTGTGACTGAACAGGAATT
GAGCTCCTGTCCACTAATTGGAACTAAATTCCATCAGTGAACTATGATGACAAACATACTTTGTCTTCCCTTGTCTCTCTCGAGGCTGGGTAGTGAGGGATAAACTCAAGGATTATTTTATGCCACAGGTCAAACTGATGTTCTTGATCATGTATGCATATTTTCATCTCCAGATATGTTGAACCTTTTAACTTCAAATG
CTTAATGGTGCATTTATGGCAAAATAACGGTCATGTG