sp|Q8LCG7|NFYC2_ARATH ----> Nuclear transcription factor Y subunit C-2


Intron 1 GTAATTAATC ... GTCACGGCAG

SampleRetention score (%)Exon junction reads5'ss reads3'ss reads
A152.07575766.8
A253.3839.74644.8
A355.56668580
A457.3844.36356.3
A552.24323931
A656.9459.3617596
A753.2337.3386381
A853.77306.5339374
A957.79312.7439417.2
A1053.86274335304.7



>TRINITY_DN115743_c0_g1_i2 from sample A1 / Example spliced isoform
TTTGCCAGTGCTTTTAGGGTTTCAAGCAGCTATTTTAAGCCCCATTTCGCCATCTGTAGAAGAGCAACAGAGATTTTGGAATTGTCGGATTTCATTTCTAGGTTCTGATTATCTTTTGAAGCTATGGACCAGCAATTCTCAGTGCAACACATGGCCTTACAATATCACGGGGCAACGCCTTATCAGGCTGCGCAGATTCT
TCCCCCCATTGGTCATGGAACGTTTCAGCAGCCTCCCAATTCTTCATATGCTCATGCACCGGCTTTTTCTTTATCTGCTCATCATAATCAATTGGCCTACCAGCAGCAGCAGCAGGAAGCTCAGATTCCCTGGGCCAACCAGGTGCAGGGAATCGATCAAGCTGTCGATTTCAGAAATCACAGCCTCCCCCTGGCGAGAA
TCAAGAAAATAATGAAGTCGGACGAGCATGTCAGGATGATATCTGCAGAGGCTCCGATGGTTTTTGCCAAGGCTTGCGAGATGTTCATCAATGAACTTACTCTCAGGGCCTGGAATCAGACAGAAGAAACCAAGCGACGGACCCTGCAGAAAATCGATATAGCTGCGGCAATAACTAGAAGTGATATATTCGATTTTCTA
ATCGATATTTTGCCGAGAGATGAGTTGAAGGAGGATCAGGGATAATATATGCACGCAGACTAATCAAGATCATCCAGTTCTGGTTAAAAGCAGGGCCTGATGATGAGTCGGCTCATGGCTGCATGCTCTTTTCTTTTATTATCAGAAATGGCTGTTCTTTTCTAAGCTGATTGCCCTGCGGCGGATCATCTGCCTCCTGT
TCTTTCTCCTCATTCTGTTTTCCAAGATTACTCTGCAAGTTTTCTTTTATGAATTCGATTCTGCGCTGTAAATATACTGTTTCTCTGCAACGAAAGCGCAGGTAGAAGAAGATTTAAACTGTTATATTTGTTTTAAGGTTTTCCGTAGTATTTCTGTAAATGGTTCAATTATCATTTATCCAGCTTTCATGGCTTTCATA
GCTTCTATTCTCGAGTTTCCAGTTCAGAGATTTTACAGCGATAAAATCTAACCTGAGTTTATGATCTAAGTTCAACTTGGTTAAGCGCCATGTATAAATATTTTGGATTCCAGCTGGCTGGCATCGAAAAGACTTCATATCTGTTTTGATTCCCAATAGATAAGGTATTTACACCGAACTCCATCTTTGATGTATATAAA
TATATTATTGCTTGTGAAGCATTGATTTCAAA


>TRINITY_DN115743_c0_g1_i7 from sample A1 / Example unspliced isoform:
TTTGCCAGTGCTTTTAGGGTTTCAAGCAGCTATTTTAAGCCCCATTTCGCCATCTGTAGAAGAGCAACAGAGATTTTGGAATTGTCGGATTTCATTTCTAGGTTCTGATTATCTTTTGAAGCTATGGACCAGCAATTCTCAGTGCAACACATGGCCTTACAATATCACGGGGCAACGCCTTATCAGGCTGCGCAGATTCT
TCCCCCCATTGGTCATGGAACGTTTCAGCAGCCTCCCAATTCTTCATATGCTCATGCACCGGCTTTTTCTTTATCTGCTCATCATAATCAATTGGCCTACCAGCAGCAGCAGCAGGAAGCTCAGATTCCCTGGGCCAACCAGGTGCAGGGAATCGATCAAGCTGTCGATTTCAGAAATCACAGCCTCCCCCTGGCGAGAA
TCAAGAAAATAATGAAGTCGGACGAGCATGTCAGGATGATATCTGCAGAGGCTCCGATGGTTTTTGCCAAGGCTTGCGAGATGTTCATCAATGAACTTACTCTCAGGGCCTGGAATCAGACAGAAGAAACCAAGCGACGGACCCTGCAGAAAATCGATATAGCTGCGGCAATAACTAGAAGTGATATATTCGATTTTCTA
ATCGATATTTTGCCGAGAGATGAGTTGAAGGAGGATCAGgtaattaatcttggaatccctaaatcttctctctcagttggtgctaattctttccctaattattatttaccgaaccagcactctgcgcctggtggagtactgattgttaggaaagccatggatcctgctatttatatgcagaatatgtcacggcagGGATA
A
TATATGCACGCAGACTAATCAAGATCATCCAGTTCTGGTTAAAAGCAGGGCCTGATGATGAGTCGGCTCATGGCTGCATGCTCTTTTCTTTTATTATCAGAAATGGCTGTTCTTTTCTAAGCTGATTGCCCTGCGGCGGATCATCTGCCTCCTGTTCTTTCTCCTCATTCTGTTTTCCAAGATTACTCTGCAAGTTTTC
TTTTATGAATTCGATTCTGCGCTGTAAATATACTGTTTCTCTGCAACGAAAGCGCAGGTAGAAGAAGATTTAAACTGTTATATTTGTTTTAAGGTTTTCCGTAGTATTTCTGTAAATGGTTCAATTATCATTTATCCAGCTTTCATGGCTTTCATAGCTTCTATTCTCGAGTTTCCAGTTCAGAGATTTTACAGCGATAA
AATCTAACCTGAGTTTATGATCTAAGTTCAACTTGGTTAAGCGCCATGTATAAATATTTTGGATTCCAGCTGGCTGGCATCGAAAAGACTTCATATCTGTTTTGATTCCCAATAGATAAGGTATTTACACCGAACTCCATCTTTGATGTATATAAATATATTATTGCTTGTGAAGCATTGATTTCAAA




Intron 2 GTAATTAATC ... TTATATGCAG

SampleRetention score (%)Exon junction reads5'ss reads3'ss reads
A157.4945.45765.9
A257.78314638.9
A360.85468558
A459.06416355.3
A561.06223930
A658.98389.1617502
A754.94282.6386303.1
A856.02257.1339316.1
A959.59279.1439384.1
A1055.34243.3335268



>TRINITY_DN115743_c0_g1_i3 from sample A1 / Example spliced isoform
CAGAGATCTTGGGCTTGTTGGATTTCCGAACTTGGTAAAATATGGATAAGCAATCCACTATGCAACACATGCCCGCTCAGTACGAGGTAACGCCTTATCAGGCTGCGCAGATTCTTCCCCCCATTGGTCATGGAACGTTTCAGCAGCCTCCCAATTCTTCATATGCTCATGCACCGGCTTTTTCTTTATCTGCTCATCAT
AATCAATTGGCCTACCAGCAGCAGCAGCAGGAAGCTCAGATTCCCTGGGCCAACCAGGTGCAGGGAATCGATCAAGCTGTCGATTTCAGAAATCACAGCCTCCCCCTGGCGAGAATCAAGAAAATAATGAAGTCGGACGAGCATGTCAGGATGATATCTGCAGAGGCTCCGATGGTTTTTGCCAAGGCTTGCGAGATGTT
CATCAATGAACTTACTCTCAGGGCCTGGAATCAGACAGAAGAAACCAAGCGACGGACCCTGCAGAAAATCGATATAGCTGCGGCAATAACTAGAAGTGATATATTCGATTTTCTAATCGATATTTTGCCGAGAGATGAGTTGAAGGAGGATCAGAATATGTCACGGCAGGGATAATATATGCACGCAGACTAATCAAGAT
CATCCAGTTCTGGTTAAAAGCAGCGCCTGATGATGAGTCGGCTCATGGCTGCATGCTCTTTTCTTTTATTATCAGAAATGGCTGTTCTTTTCTAAGCTGATTGCCCTGCGGCGGATCATCTGCCTCCTGTTCTTTCTCCTCATTCTGTTTTCCAAGATTACTCTGCAAGTTTTCTTTTATGAATTCGATTCTGCGCTGTA
AATATACTGTTTCTCTGCAACGAAAGCGCAGGTAGAAGAAGATTTAAACTGTTATATTTGTTTTAAGGTTTTCCGTAGTATTTCTGTAAATGGTTCAATTATCATTTATCCAGCTTTCATGGCTTTCATAGCTTCTATTCTCGAGTTTCCAGTTCAGAGATTTTACAGCGATAAAATCTAACCTGAGTTTATGATCTAAG
TTCAACTTGGTTAAGCGCCATGTATAAATATTTTGGATTCCAGCTGGCTGGCATCGAAAAGACTTCATATCTGTTTTGATTCCCAATAGATAAGGTATTTACACCGAACTCCATCTTTGATGTATATAAATATATTATTGCTTGTGAAGCATTGATTTCAAA


>TRINITY_DN115743_c0_g1_i7 from sample A1 / Example unspliced isoform:
TTTGCCAGTGCTTTTAGGGTTTCAAGCAGCTATTTTAAGCCCCATTTCGCCATCTGTAGAAGAGCAACAGAGATTTTGGAATTGTCGGATTTCATTTCTAGGTTCTGATTATCTTTTGAAGCTATGGACCAGCAATTCTCAGTGCAACACATGGCCTTACAATATCACGGGGCAACGCCTTATCAGGCTGCGCAGATTCT
TCCCCCCATTGGTCATGGAACGTTTCAGCAGCCTCCCAATTCTTCATATGCTCATGCACCGGCTTTTTCTTTATCTGCTCATCATAATCAATTGGCCTACCAGCAGCAGCAGCAGGAAGCTCAGATTCCCTGGGCCAACCAGGTGCAGGGAATCGATCAAGCTGTCGATTTCAGAAATCACAGCCTCCCCCTGGCGAGAA
TCAAGAAAATAATGAAGTCGGACGAGCATGTCAGGATGATATCTGCAGAGGCTCCGATGGTTTTTGCCAAGGCTTGCGAGATGTTCATCAATGAACTTACTCTCAGGGCCTGGAATCAGACAGAAGAAACCAAGCGACGGACCCTGCAGAAAATCGATATAGCTGCGGCAATAACTAGAAGTGATATATTCGATTTTCTA
ATCGATATTTTGCCGAGAGATGAGTTGAAGGAGGATCAGgtaattaatcttggaatccctaaatcttctctctcagttggtgctaattctttccctaattattatttaccgaaccagcactctgcgcctggtggagtactgattgttaggaaagccatggatcctgctatttatatgcagAATATGTCACGGCAGGGATA
ATATATGCACGCAGACTAATCAAGATCATCCAGTTCTGGTTAAAAGCAGGGCCTGATGATGAGTCGGCTCATGGCTGCATGCTCTTTTCTTTTATTATCAGAAATGGCTGTTCTTTTCTAAGCTGATTGCCCTGCGGCGGATCATCTGCCTCCTGTTCTTTCTCCTCATTCTGTTTTCCAAGATTACTCTGCAAGTTTTC
TTTTATGAATTCGATTCTGCGCTGTAAATATACTGTTTCTCTGCAACGAAAGCGCAGGTAGAAGAAGATTTAAACTGTTATATTTGTTTTAAGGTTTTCCGTAGTATTTCTGTAAATGGTTCAATTATCATTTATCCAGCTTTCATGGCTTTCATAGCTTCTATTCTCGAGTTTCCAGTTCAGAGATTTTACAGCGATAA
AATCTAACCTGAGTTTATGATCTAAGTTCAACTTGGTTAAGCGCCATGTATAAATATTTTGGATTCCAGCTGGCTGGCATCGAAAAGACTTCATATCTGTTTTGATTCCCAATAGATAAGGTATTTACACCGAACTCCATCTTTGATGTATATAAATATATTATTGCTTGTGAAGCATTGATTTCAAA




Intron 3 GTAATTAATC ... ACCGAACCAG

SampleRetention score (%)Exon junction reads5'ss reads3'ss reads
A160.69345748
A261.29244630
A362.75468570
A461.14346344
A558.68253932
A662.64297617379
A756.78231386221
A855.98228339241
A963.34215439304
A1064.89148335212



>TRINITY_DN113739_c0_g1_i8 from sample A3 / Example spliced isoform
GCCAGTGCTTTTAGGGTTTCAAGCAGCTATTTTAAGCCCCATTTCGCCATCTGTAGAAGAGCAACAGAGATTTTGGAATTGTCGGATTTCATTTCTAGGTTCTGATTATCTTTTGAAGCTATGGACCAGCAATTCTCAGTGCAACACATGGCCTTACAATATCACGGGGCAACGCCTTATCAGGCTGCGCAGATTCTTCC
CCCCATTGGTCATGGAACGTTTCAGCAGCCTCCCAATTCTTCATATGCTCATGCACCGGCTTTTTCTTTATCTGCTCATCATAATCAATTGGCCTACCAGCAGCAGCAGCAGGAAGCTCAGATTCCCTGGGCCAACCAGGTGCAGGGAATCGATCAAGCTGTCGATTTCAGAAATCACAGCCTCCCCCTGGCGAGAATCA
AGAAAATAATGAAGTCGGACGAGCATGTCAGGATGATATCTGCAGAGGCTCCGATGGTTTTTGCCAAGGCTTGCGAGATGTTCATCAATGAACTTACTCTCAGGGCCTGGAATCAGACAGAAGAAACCAAGCGACGGACCCTGCAGAAAATCGATATAGCTGCGGCAATAACTAGAAGTGATATATTCGATTTTCTAATC
GATATTTTGCCGAGAGATGAGTTGAAGGAGGATCAGCACTCTGCGCCTGGTGGAGTACTGATTGTTAGGAAAGCCATGGATCCTGCTATTTATATGCAGAATATGTCACGGCAGGGATAATATATGCACGCAGACTAATCAAGATCATCCAGTTCTGGTTAAAAGCAGGGCCTGATGATGAGTCGGCTCATGGCTGCATG
CTCTTTTCTTTTATTATCAGAAGTGGCTGTTCTTTTCTAAGCTGATTGCCCTGCGGCGGATCATCTGCCTCCTGTTCTTTCTCCTCATTCTGTTTTCCAAGATTACTCTGCAAGTTTTCTTTTATGAATTCGATTCTGCGCTGTAAATATACTGTTTCTCTGCAACGAAAGCGCAGGTAGAAGAAGATTTAAACTGTTAT
ATTTGTTTTAAGGTTTTCCGTAGTATTTCTGTAAATGGTTCAATTATCATTTATCCAGCTTTCATGGCTTTCATAGCTTCTATTCTCGAGTTTCCAGTTCAGAGATTTTACAGCGATAAAATCTAACCTGAGTTTATGATCTAAGTTCAACTTGGTTAAGCGCCATGTATAAATATTTTGGATTCCAGCTGGCTGGCATC
GAAAAGACTTCATATCTGTTTTGATTCCCAATAGATAAGGTATTTACACCGAACTCCATCTTTGATGTATATAAATATATTATTGCTTGTGAAGCATTGATTTCTACATGATGTATATAAATATATTATTGCTTGTGAAGCATTGATTTCTACATGATGTATATAAATATATTATTG


>TRINITY_DN113739_c0_g1_i6 from sample A3 / Example unspliced isoform:
GCCAGTGCTTTTAGGGTTTCAAGCAGCTATTTTAAGCCCCATTTCGCCATCTGTAGAAGAGCAACAGAGATTTTGGAATTGTCGGATTTCATTTCTAGGTTCTGATTATCTTTTGAAGCTATGGACCAGCAATTCTCAGTGCAACACATGGCCTTACAATATCACGGGGCAACGCCTTATCAGGCTGCGCAGATTCTTCC
CCCCATTGGTCATGGAACGTTTCAGCAGCCTCCCAATTCTTCATATGCTCATGCACCGGCTTTTTCTTTATCTGCTCATCATAATCAATTGGCCTACCAGCAGCAGCAGCAGGAAGCTCAGATTCCCTGGGCCAACCAGGTGCAGGGAATCGATCAAGCTGTCGATTTCAGAAATCACAGCCTCCCCCTGGCGAGAATCA
AGAAAATAATGAAGTCGGACGAGCATGTCAGGATGATATCTGCAGAGGCTCCGATGGTTTTTGCCAAGGCTTGCGAGATGTTCATCAATGAACTTACTCTCAGGGCCTGGAATCAGACAGAAGAAACCAAGCGACGGACCCTGCAGAAAATCGATATAGCTGCGGCAATAACTAGAAGTGATATATTCGATTTTCTAATC
GATATTTTGCCGAGAGATGAGTTGAAGGAGGATCAGgtaattaatcttggaatccctaaatcttctctctcagttggtgctaattctttccctaattattatttaccgaaccagCACTCTGCGCCTGGTGGAGTACTGATTGTTAGGAAAGCCATGGATCCTGCTATTTATATGCAGAATATGTCACGGCAGGGATAATA
TATGCACGCAGACTAATCAAGATCATCCAGTTCTGGTTAAAAGCAGGGCCTGATGATGAGTCGGCTCATGGCTGCATGCTCTTTTCTTTTATTATCAGAAGTGGCTGTTCTTTTCTAAGCTGATTGCCCTGCGGCGGATCATCTGCCTCCTGTTCTTTCTCCTCATTCTGTTTTCCAAGATTACTCTGCAAGTTTTCTTT
TATGAATTCGATTCTGCGCTGTAAATATACTGTTTCTCTGCAACGAAAGCGCAGGTAGAAGAAGATTTAAACTGTTATATTTGTTTTAAGGTTTTCCGTAGTATTTCTGTAAATGGTTCAATTATCATTTATCCAGCTTTCATGGCTTTCATAGCTTCTATTCTCGAGTTTCCAGTTCAGAGATTTTACAGCGATAAAAT
CTAACCTGAGTTTATGATCTAAGTTCAACTTGGTTAAGCGCCATGTATAAATATTTTGGATTCCAGCTGGCTGGCATCGAAAAGACTTCATATCTGTTTTGATTCCCAATAGATAAGGTATTTACACCGAACTCCATCTTTGATGTATATAAATATATTATTGCTTGTGAAGCATTGATTTCTACATGATGTATATAAAT
ATATTATTGCTTGTGAAGCATTGATTTCTACATGATGTATATAAATATATTATTG




Intron 4 GTAATTAATC ... GATCATCCAG

SampleRetention score (%)Exon junction reads5'ss reads3'ss reads
A162.81375768
A256.22514685
A3625785101
A464.88366370
A560273942
A664.71373617751
A762.29263386483
A861.07268339502
A964.1261439493
A1063.03210335381



>TRINITY_DN115743_c0_g1_i6 from sample A1 / Example spliced isoform
TTTGCCAGTGCTTTTAGGGTTTCAAGCAGCTATTTTAAGCCCCATTTCGCCATCTGTAGAAGAGCAACAGAGATTTTGGAATTGTCGGATTTCATTTCTAGGTTCTGATTATCTTTTGAAGCTATGGACCAGCAATTCTCAGTGCAACACATGGCCTTACAATATCACGGGGCAACGCCTTATCAGGCTGCGCAGATTCT
TCCCCCCATTGGTCATGGAACGTTTCAGCAGCCTCCCAATTCTTCATATGCTCATGCACCGGCTTTTTCTTTATCTGCTCATCATAATCAATTGGCCTACCAGCAGCAGCAGCAGGAAGCTCAGATTCCCTGGGCCAACCAGGTGCAGGGAATCGATCAAGCTGTCGATTTCAGAAATCACAGCCTCCCCCTGGCGAGAA
TCAAGAAAATAATGAAGTCGGACGAGCATGTCAGGATGATATCTGCAGAGGCTCCGATGGTTTTTGCCAAGGCTTGCGAGATGTTCATCAATGAACTTACTCTCAGGGCCTGGAATCAGACAGAAGAAACCAAGCGACGGACCCTGCAGAAAATCGATATAGCTGCGGCAATAACTAGAAGTGATATATTCGATTTTCTA
ATCGATATTTTGCCGAGAGATGAGTTGAAGGAGGATCAGTTCTGGTTAAAAGCAGGGCCTGATGATGAGTCGGCTCATGGCTGCATGCTCTTTTCTTTTATTATCAGAAATGGCTGTTCTTTTCTAAGCTGATTGCCCTGCGGCGGATCATCTGCCTCCTGTTCTTTCTCCTCATTCTGTTTTCCAAGATTACTCTGCAA
GTTTTCTTTTATGAATTCGATTCTGCGCTGTAAATATACTGTTTCTCTGCAACGAAAGCGCAGGTAGAAGAAGATTTAAACTGTTATATTTGTTTTAAGGTTTTCCGTAGTATTTCTGTAAATGGTTCAATTATCATTTATCCAGCTTTCATGGCTTTCATAGCTTCTATTCTCGAGTTTCCAGTTCAGAGATTTTACAG
CGATAAAATCTAACCTGAGTTTATGATCTAAGTTCAACTTGGTTAAGCGCCATGTATAAATATTTTGGATTCCAGCTGGCTGGCATCGAAAAGACTTCATATCTGTTTTGATTCCCAATAGATAAGGTATTTACACCGAACTCCATCTTTGATGTATATAAATATATTATTGCTTGTGAAGCATTGATTTCAAA


>TRINITY_DN115743_c0_g1_i7 from sample A1 / Example unspliced isoform:
TTTGCCAGTGCTTTTAGGGTTTCAAGCAGCTATTTTAAGCCCCATTTCGCCATCTGTAGAAGAGCAACAGAGATTTTGGAATTGTCGGATTTCATTTCTAGGTTCTGATTATCTTTTGAAGCTATGGACCAGCAATTCTCAGTGCAACACATGGCCTTACAATATCACGGGGCAACGCCTTATCAGGCTGCGCAGATTCT
TCCCCCCATTGGTCATGGAACGTTTCAGCAGCCTCCCAATTCTTCATATGCTCATGCACCGGCTTTTTCTTTATCTGCTCATCATAATCAATTGGCCTACCAGCAGCAGCAGCAGGAAGCTCAGATTCCCTGGGCCAACCAGGTGCAGGGAATCGATCAAGCTGTCGATTTCAGAAATCACAGCCTCCCCCTGGCGAGAA
TCAAGAAAATAATGAAGTCGGACGAGCATGTCAGGATGATATCTGCAGAGGCTCCGATGGTTTTTGCCAAGGCTTGCGAGATGTTCATCAATGAACTTACTCTCAGGGCCTGGAATCAGACAGAAGAAACCAAGCGACGGACCCTGCAGAAAATCGATATAGCTGCGGCAATAACTAGAAGTGATATATTCGATTTTCTA
ATCGATATTTTGCCGAGAGATGAGTTGAAGGAGGATCAGgtaattaatcttggaatccctaaatcttctctctcagttggtgctaattctttccctaattattatttaccgaaccagcactctgcgcctggtggagtactgattgttaggaaagccatggatcctgctatttatatgcagaatatgtcacggcagggata
atatatgcacgcagactaatcaagatcatccag
TTCTGGTTAAAAGCAGGGCCTGATGATGAGTCGGCTCATGGCTGCATGCTCTTTTCTTTTATTATCAGAAATGGCTGTTCTTTTCTAAGCTGATTGCCCTGCGGCGGATCATCTGCCTCCTGTTCTTTCTCCTCATTCTGTTTTCCAAGATTACTCTGCAAGTTTTC
TTTTATGAATTCGATTCTGCGCTGTAAATATACTGTTTCTCTGCAACGAAAGCGCAGGTAGAAGAAGATTTAAACTGTTATATTTGTTTTAAGGTTTTCCGTAGTATTTCTGTAAATGGTTCAATTATCATTTATCCAGCTTTCATGGCTTTCATAGCTTCTATTCTCGAGTTTCCAGTTCAGAGATTTTACAGCGATAA
AATCTAACCTGAGTTTATGATCTAAGTTCAACTTGGTTAAGCGCCATGTATAAATATTTTGGATTCCAGCTGGCTGGCATCGAAAAGACTTCATATCTGTTTTGATTCCCAATAGATAAGGTATTTACACCGAACTCCATCTTTGATGTATATAAATATATTATTGCTTGTGAAGCATTGATTTCAAA