sp|Q9SYI0|SECA1_ARATH ----> Protein translocase subunit SECA1, chloroplastic
Intron 1 GTGGAAAACT ... ATTTATACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 73.33 | 6 | 17 | 16 |
| A2 | 65.85 | 7 | 15 | 12 |
| A3 | 88.24 | 1 | 7 | 8 |
| A4 | 66.67 | 2 | 4 | 4 |
| A5 | 63.64 | 2 | 2 | 5 |
| A6 | 75 | 1 | 4 | 2 |
| A7 | 86.67 | 2 | 9 | 17 |
| A8 | 68.75 | 5 | 10 | 12 |
| A9 | 88.06 | 4 | 26 | 33 |
| A10 | 100 | 0 | 2 | 2 |
>TRINITY_DN36544_c0_g1_i3 from sample A7 / Example spliced isoformGGAAGCTTCTAAAAGAATATTGGGTCTTCGGCCTTTTGATGTGCAGTTGATAGGAGGTATGGTTCTCCATAAGGGAGAAATTGCAGAAATGAGGACAGGGGAAGGCAAAACGTTGGTTGCAGTTTTACCTGCTTACTTGAATGCATTGACTGGAAAGGGAGTGCATATGGTTACTGTAAATGATTATCTTGCTCGCCGTG
ATTGTGAATGGGTTGGTCAAGTGCCTCGATTTTTGGGACTTAATGTTGGCCTTATTCAACAGAACATGTCAAGTGAAGAGAGGAGAGCAAACTACTCATGTGATATGACTTATGTCACAAATAGTGAACTTGGCTTCGACTACTTGAGAGATAATCTTGCCACGACTGTAGATGAGCTTGTCATGAGGCGGTTCAATTTT
TGTGTTATTGATGAGGTGGATTCCATTTTGATTGATGAAGCTAGAACACCACTCATCATATCTGGACTTGCAGAAAAACCTAGTGATCGATACTACAAAACAGCGAAGATTGCAGATGCATTTGTGAGAGATATACATTATACTGTTGATGAAAAACAGAAGACAGTTTTGCTAACCGAGGAAGGATATGAGGATGCTGA
AGAAATTTTGAATGTAAAAGATCTATATGATCCTCGAGAACAATGGGCTTCATTTGTATTAAATGCCATAAAAGCAAAGGAGTTATTTTTGAGAGATGTGAATTACATTGTCCGTGGCAAGGAGGTTCTGATTGTGGATGAGTTTACTGGCCGTGTCATGCAGGGCAGAAGATGGAGTGATGGCCTGCATCAGGCAGTAG
AAGCAAAGGAAGGTTTACCGATACAGAATGAGACTGTTACACTGGCTTCGATAAGCTATCAAAATTTTTTTCTCCAGTTTCCCAAGCTCTGTGGGATGACTGGTACAGCAGCAACTGAAAGTACAGAGTTTGAGAGTATATATAAGCTAAGGGTGACAGTGGTGCCGACCAATAAATCAATGATACGAAAGGACGAATCT
GATGTAGTGTTCAGGGCAGCTACAGGGAAATGGCAAGCAGCTGTTGTAGAAATCTCGCGCATGCACAAAACAGGGCGTCCTGTGCTGGTTGGTACAACAAGTGTTGAACAAAGTGATGCATTGTCAGAGCAGTTGAAGGAGGCTTGCATTCCTCATGAGGTTCTTAATGCAAAACCAGAAAACGTGGAGAGAGAAGCAGA
AATAGTAGCCCAAAGTGGCCGCCTTGGAGCTGTCACTATAGCTACAAATATGGCAGGGCGTGGAACAGATATCATCCTTGGTGGAAATGCAGAATTTATGGCAAAGTTGAAGTTGCGTGAGCTTCTTATGCCAAGGATTGTTAACACAGTGGATGAAATACAACTTGAAAGAAAACGAAAATTGCCTCTAAGGAAAAACT
GGAAGGTAAATGAAAATCTATTTCCATGCGATTTGTCTCCAGATAGTTTGTCCTTGGTAGAGGATGCAGTTCAGATGGCTGTCAGAACATGGGGTAAGAGATCATTGACTGAGCTTCAGGCAGAAGACCGCCTGTCATATGCATGTGAAAAGGGACCAATCCAAGATGAAGTCATTGCAAAGTTACGCAGTGCTTTTGAA
GCTATTGTTTATGAGTATAAAATCTATACAGAAGAGGAGAAAAGAAAGGTAATTGCAGCAGGTGGACTTCATGTGGTCGGTACAGAACGTCATGAGTCAAGGCGTATTGACAATCAGCTGCGTGGAAGAAGTGGTAGGCAAGGTGATCCAGGAAGCTCAAGATTTTTTTTAAGTCTTGAAGACAACATCTTTCGCATTTT
TGGCGGAGATCGCATACAGGGTTTGATGAGGGCATTTAGAGTTGAAGACTTACCAATAGAGTCGAAAATGCTTACAAAATCATTGGATGAGGCTCAGAGGAAGAGCGCAGGCGTGCTCTTGAAGCTGATAATCTTCAACCTCAAATGATAGAATATGCAGAACTTACCATGGATGATATTCTGGAGGCAAACATTAGTCC
AGAAACTCCTAAAGAAAATTGGAATCTTGAAGCTCTTGTTACAAAATTACAGCAGTACTGTTATTTGTTAAATGATTTGACACCTGAAATGCTAGCAGAAAAGTGCAGCAGTTATGATAGCCTGCGGGAATATCTTCAACTTCGTGGTGGGGAGGCGTACTTGCAAAAAAGGGAGGAGGTAGAGAAAGAGTCACCCGGTT
TGATGAAAGAAGCTGAGCGTTATTTTATATTAACCAATATTGATCGACTATGGAAGGAACACTTGCAAGCATTGAAGTTTGTCCAACAAGCAGTGGGTTTGCGAGGATATGCTCAGCGAGATCCGCTTATAGAGTACAAGCTTGAAGGCTACAATTTATTTCTGGATATGATGGCCAAAATTCGGCGGAATGTTATCTAC
TCTGTTTACCAGTTTAAAGCAGTAATGGTCAAAGCTGCTCAAGGCGTACAGGCTAGTAAGAAAGATGGAAAGATTCCAAATGAACCAGAGAAAGCCAATGTCACTAACACTCAAAGGACCAATAACGATGATCCAATTCCCGCTGCTCAAATTTCCTCCTAATGGAATAATGCCACAGATAAAGACTAAATCTGGGCATC
AAGTTCATAAAAAGGCATCAAGAAAACACTGAATGAAGTGCCCGCATTGTACTTGTCTACAAGCTTCTCATCACTAGCATTCAAGTTTGAAAAAAGACATCGAGAAAACACTCAATGAACTGCCCTCGCACTTTGCTAAGTTTCTAAGAAGTTTAGTTATTCTTTATGTTTTAATCACTAATTCATTTTGTCAAATGCTT
CATATTTAATGTGTATAATATTCAGCAGACAATAAATCCACACATGGCATATTCTTTTTGGCTACTTTGCACAGTTCAATTTTGTAAGATTTCCGAT
>TRINITY_DN36544_c0_g1_i1 from sample A7 / Example unspliced isoform:GGAAGCTTCTAAAAGAATATTGGGTCTTCGGCCTTTTGATGTGCAGTTGATAGGAGGTATGGTTCTCCATAAGGGAGAAATTGCAGAAATGAGGACAGGGGAAGGCAAAACGTTGGTTGCAGTTTTACCTGCTTACTTGAATGCATTGACTGGAAAGGGAGTGCATATGGTTACTGTAAATGATTATCTTGCTCGCCGTG
ATTGTGAATGGGTTGGTCAAGTGCCTCGATTTTTGGGACTTAATGTTGGCCTTATTCAACAGAACATGTCAAGTGAAGAGAGGAGAGCAAACTACTCATGTGATATGACTTATGTCACAAATAGTGAACTTGGCTTCGACTACTTGAGAGATAATCTTGCCACGACTGTAGATGAGCTTGTCATGAGGCGGTTCAATTTT
TGTGTTATTGATGAGGTGGATTCCATTTTGATTGATGAAGCTAGAACACCACTCATCATATCTGGACTTGCAGAAAAACCTAGTGATCGATACTACAAAACAGCGAAGATTGCAGATGCATTTGTGAGAGATATACATTATACTGTTGATGAAAAACAGAAGACAGTTTTGCTAACCGAGGAAGGATATGAGGATGCTGA
AGAAATTTTGAATGTAAAAGATCTATATGATCCTCGAGAACAATGGGCTTCATTTGTATTAAATGCCATAAAAGCAAAGGAGTTATTTTTGAGAGATGTGAATTACATTGTCCGTGGCAAGGAGGTTCTGATTGTGGATGAGTTTACTGGCCGTGTCATGCAGGGCAGAAGATGGAGTGATGGCCTGCATCAGGCAGTAG
AAGCAAAGGAAGGTTTACCGATACAGAATGAGACTGTTACACTGGCTTCGATAAGCTATCAAAATTTTTTTCTCCAGTTTCCCAAGCTCTGTGGGATGACTGGTACAGCAGCAACTGAAAGTACAGAGTTTGAGAGTATATATAAGCTAAGGGTGACAGTGGTGCCGACCAATAAATCAATGATACGAAAGGACGAATCT
GATGTAGTGTTCAGGGCAGCTACAGGGAAATGGCAAGCAGCTGTTGTAGAAATCTCGCGCATGCACAAAACAGGGCGTCCTGTGCTGGTTGGTACAACAAGTGTTGAACAAAGTGATGCATTGTCAGAGCAGTTGAAGGAGGCTTGCATTCCTCATGAGGTTCTTAATGCAAAACCAGAAAACGTGGAGAGAGAAGCAGA
AATAGTAGCCCAAAGTGGCCGCCTTGGAGCTGTCACTATAGCTACAAATATGGCAGGGCGTGGAACAGATATCATCCTTGGTGGAAATGCAGAATTTATGGCAAAGTTGAAGTTGCGTGAGCTTCTTATGCCAAGGATTGTTAACACAGTGGATGAAATACAACTTGAAAGAAAACGAAAATTGCCTCTAAGGAAAAACT
GGAAGGTAAATGAAAATCTATTTCCATGCGATTTGTCTCCAGATAGTTTGTCCTTGGTAGAGGATGCAGTTCAGATGGCTGTCAGAACATGGGGTAAGAGATCATTGACTGAGCTTCAGGCAGAAGACCGCCTGTCATATGCATGTGAAAAGGGACCAATCCAAGATGAAGTCATTGCAAAGTTACGCAGTGCTTTTGAA
GCTATTGTTTATGAGTATAAAATCTATACAGAAGAGGAGAAAAGAAAGGTAATTGCAGCAGGTGGACTTCATGTGGTCGGTACAGAACGTCATGAGTCAAGGCGTATTGACAATCAGCTGCGTGGAAGAAGTGGTAGGCAAGGTGATCCAGGAAGCTCAAGATTTTTTTTAAGTCTTGAAGACAACATCTTTCGCATTTT
TGGCGGAGATCGCATACAGGGTTTGATGAGGGCATTTAGAGTTGAAGACTTACCAATAGAGTCGAAAATGCTTACAAAATCATTGGATGAGGCTCAGAGGAAGgtggaaaactacttttttgagattcggaaacaactatttgagtatgatgaagtcctcaatagccaacgtgatcgtatttatacagAGCGCAGGCGTG
CTCTTGAAGCTGATAATCTTCAACCTCAAATGATAGAATATGCAGAACTTACCATGGATGATATTCTGGAGGCAAACATTAGTCCAGAAACTCCTAAAGAAAATTGGAATCTTGAAGCTCTTGTTACAAAATTACAGCAGTACTGTTATTTGTTAAATGATTTGACACCTGAAATGCTAGCAGAAAAGTGCAGCAGTTAT
GATAGCCTGCGGGAATATCTTCAACTTCGTGGTGGGGAGGCGTACTTGCAAAAAAGGGAGGAGGTAGAGAAAGAGTCACCCGGTTTGATGAAAGAAGCTGAGCGTTATTTTATATTAACCAATATTGATCGACTATGGAAGGAACACTTGCAAGCATTGAAGTTTGTCCAACAAGCAGTGGGTTTGCGAGGATATGCTCA
GCGAGATCCGCTTATAGAGTACAAGCTTGAAGGCTACAATTTATTTCTGGATATGATGGCCAAAATTCGGCGGAATGTTATCTACTCTGTTTACCAGTTTAAAGCAGTAATGGTCAAAGCTGCTCAAGGCGTACAGGCTAGTAAGAAAGATGGAAAGATTCCAAATGAACCAGAGAAAGCCAATGTCACTAACACTCAAA
GGACCAATAACGATGATCCAATTCCCGCTGCTCAAATTTCCTCCTAATGGAATAATGCCACAGATAAAGACTAAATCTGGGCATCAAGTTCATAAAAAGGCATCAAGAAAACACTGAATGAAGTGCCCGCATTGTACTTGTCTACAAGCTTCTCATCACTAGCATTCAAGTTTGAAAAAAGACATCGAGAAAACACTCAA
TGAACTGCCCTCGCACTTTGCTAAGTTTCTAAGAAGTTTAGTTATTCTTTATGTTTTAATCACTAATTCATTTTGTCAAATGCTTCATATTTAATGTGTATAATATTCAGCAGACAATAAATCCACACATGGCATATTCTTTTTGGCTACTTTGCACAGTTCAATTTTGTAAGATTTCCGAT