sp|Q8LCG7|NFYC2_ARATH ----> Nuclear transcription factor Y subunit C-2
Intron 1 GTAAGTCAAA ... GAGTTAAAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 42.55 | 27 | 8 | 20 |
| A2 | 51.67 | 29 | 8 | 31 |
| A3 | 45.65 | 25 | 1 | 21 |
| A4 | 55.88 | 15 | 9 | 19 |
| A5 | 52.63 | 9 | 3 | 10 |
| A6 | 47.28 | 97 | 5 | 87 |
| A7 | 46.4 | 67 | 22 | 58 |
| A8 | 43.48 | 65 | 12 | 50 |
| A9 | 43.08 | 74 | 3 | 56 |
| A10 | 46.81 | 50 | 6 | 44 |
>TRINITY_DN114086_c0_g1_i6 from sample A1 / Example spliced isoformTTCGTTGACAAGAGTAGCCATTCTATTTCTTCTTTCTTCGCTTTGTGTGCGAGGGAGAGAGGTCGGAGGGATTTCATCTGTTCATCAGCTTCACGAGAAAACCGGTCATAAAGCCCACTCATTCAGCCATCTCATAAACCGCGGAGATTTGAAAAAAGTCATTAGAGGTAAGGGTTTGTGGAAAGAAAAGTTACGCCCAT
TTGCAGAAAGTGTATGATCGGAGGTCGTAGGGTTTTCGTCGAAGAAAAGAGTGGTTTTAAGTAGGAGTGAGACTGGTTGGAGCTGCTGCTACTTGCTAAGCGTGTGTATTTATTGTGGGATATTCCTCTACCGACTCCATAAGGAAATTCAGGGCTGTCGACCCTAGAGTTTGAAGTCTTTTTTAGATACTCAGCATTGC
CTGGCGTAGGAATTTGCAAAACAGGAGTCGGAATTGATAGGAGAACGAGGCAGTGATCAAGGGCTTTGTAGAGATTTCACCTGATAAAATGGAGCAGCAAGCGCCAGGCCAGCAGCAGCCAGTTATGGGAGTTGTAAGTGGTCCACCTCAGATGCCCTATGGAACGGCCCCTTATCAAACAGCTCAGTTGGTTGCACCTG
TTGCTCCAGCCTCTGTTGTTGGAACTGTTCAGTCTCCTGGCCAGCCTGCTTCTGCATATCCTGCATCTGCTGCTCAGCTAGCTGCACAACATCAGTTAGCTTACCAGCATCTTCACCAGCAACAACAGCAGCAGCAACAGCAACAGCTGCAAATATTTTGGGCAAATCAGATGCATGATATAGAACAAACATCAGACTTC
AAGAATCATAGCTTGCCATTGGCTAGAATCAAGAAAATTATGAAGGCAGATGAAGATGTGAGGATGATTTCAGCTGAGGCGCCTGTGATTTTTGCAAAAGCTTGTGAAATGTTCATTTTGGAGCTTACCCTGCGCTCATGGATTCATACAGAGGAAAATAAGCGACGCACTTTACAGAAGAATGACATTGCAGCTGCCAT
AACTAGAACAGATATATTTGATTTTCTTGTGGATATTGTGCCAAGAGATGAGTTGAAGGAGGAGGGTCTTGGCATTCCTAGAGGTCCTGTACCTGTTGGAACTCCAGCTGAAGCTATACCATATTATTATGTTCCTCAGCAGCATCCAGGACAAGTTGCGCCTCCTGGAATGATCGTTGGCAAGCCAGTGGATCCTGCAA
TGTATGCTCAACAACCTCGTCCTCCTGTTGCTTATATGCCGCCACAGATGTGGCCACAACAACAAATGCCAGAGCAATCCAGGGGTCCATCCTCTAGCAGTTAGGTTATTTGGGTTGTTTCCTGTTGCCAGCAACAGGTAAATGGTAAGAGGGAAAATGACAAATCCCTATTTTGATTATGTGGAAAGGCGTATGCTCAA
GTTCAATCTGGTAAGAGTTGTTTGACCTGCCCTGTAGAAATGATTTATAAACCAAGGATCGATTTGAGCAAGTTCTTGTGTTTTCTGTTGTGCTCTCCAAGCCTCCACAACTTTAAAATTCTGGCTGGATATTTTGCATGAAATTGTTTCATGCCCATCTTCATTTGAACGGAATTAAGAGATGCTGTGAACATTTTTGT
TTTTTGATACATGCA
>TRINITY_DN114086_c0_g1_i15 from sample A1 / Example unspliced isoform:CCGCTAGACCTGGATGCAAAGGTCATTTTTTTCTATGCTTGGAGTAAAGAATTTAGGAACATTATTTGTCATGTTTTTTTGAATTTGAAGGAATTGGGGTAGTTAGGGCTTTTGTGTTTAGTAACATTGAAAGAATATCGTGGTTCGGGCTCTTGGATTTTCATGTCTTTAATTCTTAATGTTGGTTTTGGAATTTTGTA
GAAAAGAGTGGTTTTAAGTAGGAGTGAGACTGGTTGGAGCTGCTGCTACTTGCTAAGCGTGTGTATTTATTGTGGGATATTCCTCTACCGACTCCATAAGGTAAATGTTGGATTATAAGGTGCATTAGTTTTTATGAAAGTTGGAAATGAGCGGTTGACATCCCATGTTTCATTTGTCTTTCGATGATCAAGAAAGATGT
GTTGACATTTGAATAAAATCGAGAGAAAGTTACATTATTTGCAAGTTAATTCTGCAAGAGGTGGTTTGGTTCCAATGGTTAAAGAAATTTAGTGATCTGTTTAAGTGTTAAGCATCTTACAGGAAATTCAGGGCTGTCGACCCTAGAGTTTGAAGTCTTTTTTAGATACTCAGCATTGCCTGGCGTAGGAATTTGCAgta
agtcaaatattttgagatcagaatggcgaactttgcaagcaacagtttataatgtgaatagttttaagaagcctttattcatgtcgtaggcattgcattgtctaggaatttcaatttacaattatgtagtctctcgaatttaaaatatagaggtcctagaatagatcagtttatactgtatatctaatgcatgcattttc
tggagtgttaatgagggttgtgggatttttggagttaaaagAAACAGGAGTCGGAATTGATAGGAGAACGAGGCAGTGATCAAGGGCTTTGTAGAGATTTCACCTGATAAAATGGAGCAGCAAGCGCCAGGCCAGCAGCAGCCAGTTATGGGAGTTGTAAGTGGTCCACCTCAGATGCCCTATGGAACGGCCCCTTATCA
AACAGCTCAGTTGGTTGCACCTGTTGCTCCAGCCTCTGTTGTTGGAACTGTTCAGTCTCCTGGCCAGCCTGCTTCTGCATATCCTGCATCTGCTGCTCAGCTAGCTGCACAACATCAGTTAGCTTACCAGCATCTTCACCAGCAACAACAGCAGCAGCAACAGCAACAGCTGCAAATATTTTGGGCAAATCAGATGCATG
ATATAGAACAAACATCAGACTTCAAGAATCATAGCTTGCCATTGGCTAGAATCAAGAAAATTATGAAGGCAGATGAAGATGTGAGGATGATTTCAGCTGAGGCGCCTGTGATTTTTGCAAAAGCTTGTGAAATGTTCATTTTGGAGCTTACCCTGCGCTCATGGATTCATACAGAGGAAAATAAGCGACGCACTTTACAG
AAGAATGACATTGCAGCTGCCATAACTAGAACAGATATATTTGATTTTCTTGTGGATATTGTGCCAAGAGATGAGTTGAAGGAGGAGGGTCTTGGCATTCCTAGAGGTCCTGTACCTGTTGGAACTCCAGCTGAAGCTATACCATATTATTATGTTCCTCAGCAGCATCCAGGACAAGTTGCGCCTCCTGGAATGATCGT
TGGCAAGCCAGTGGATCCTGCAATGTATGCTCAACAACCTCGTCCTCCTGTTGCTTATATGCCGCCACAGATGTGGCCACAACAACAAATGCCAGAGCAATCCAGGGGTCCATCCTCTAGCAGTTAGGTTATTTGGGTTGTTTCCTGTTGCCAGCAACAGGTAAATGGTAAGAGGGAAAATGACAAATCCCTATTTTGAT
TATGTGGAAAGGCGTATGCTCAAGTTCAATCTGGTAAGAGTTGTTTGACCTGCCCTGTAGAAATGATTTATAAACCAAGGATCGATTTGAGCAAGTTCTTGTGTTTTCTGTTGTGCTCTCCAAGCCTCCACAACTTTAAAATTCTGGCTGGATATTTTGCATGAAATTGTTTCATGCCCATCTTCATTTGAACGGAATTA
AGAGATGCTGTGAACATTTTTGTTTTTTGATACATGCA
Intron 2 GTAAATGTTG ... GAGTTAAAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 40.82 | 29 | 11.5 | 20 |
| A2 | 38.27 | 50 | 8.5 | 31 |
| A3 | 36.84 | 36 | 11.4 | 21 |
| A4 | 35.85 | 34 | 15.1 | 19 |
| A5 | 43.48 | 13 | 5.3 | 10 |
| A6 | 37.83 | 143 | 6.9 | 87 |
| A7 | 41.43 | 82 | 14.2 | 58 |
| A8 | 44.25 | 63 | 9.4 | 50 |
| A9 | 37.09 | 95 | 8.6 | 56 |
| A10 | 32.59 | 91 | 33 | 44 |
>TRINITY_DN114086_c0_g1_i5 from sample A1 / Example spliced isoformTTCGTTGACAAGAGTAGCCATTCTATTTCTTCTTTCTTCGCTTTGTGTGCGAGGGAGAGAGGTCGGAGGGATTTCATCTGTTCATCAGCTTCACGAGAAAACCGGTCATAAAGCCCACTCATTCAGCCATCTCATAAACCGCGGAGATTTGAAAAAAGTCATTAGAGGGTTTGTGGAAAGAAAAGTTACGCCCATTTGCA
GAAAGTGTATGATCGGAGGTCGTAGGGTTTTCGTCGAAGAAAAGAGTGGTTTTAAGTAGGAGTGAGACTGGTTGGAGCTGCTGCTACTTGCTAAGCGTGTGTATTTATTGTGGGATATTCCTCTACCGACTCCATAAGAAACAGGAGTCGGAATTGATAGGAGAACGAGGCAGTGATCAAGGGCTTTGTAGAGATTTCAC
CTGATAAAATGGAGCAGCAAGCGCCAGGCCAGCAGCAGCCAGTTATGGGAGTTGTAAGTGGTCCACCTCAGATGCCCTATGGAACGGCCCCTTATCAAACAGCTCAGTTGGTTGCACCTGTTGCTCCAGCCTCTGTTGTTGGAACTGTTCAGTCTCCTGGCCAGCCTGCTTCTGCATATCCTGCATCTGCTGCTCAGCTA
GCTGCACAACATCAGTTAGCTTACCAGCATCTTCACCAGCAACAACAGCAGCAGCAACAGCAACAGCTGCAAATATTTTGGGCAAATCAGATGCATGATATAGAACAAACATCAGACTTCAAGAATCATAGCTTGCCATTGGCTAGAATCAAGAAAATTATGAAGGCAGATGAAAATTATGAAGGCATGAATTACCCTCC
ACAGTCTTAATTATTATCTCACTTCATTAA
>TRINITY_DN114086_c0_g1_i4 from sample A1 / Example unspliced isoform:TTCGTTGACAAGAGTAGCCATTCTATTTCTTCTTTCTTCGCTTTGTGTGCGAGGGAGAGAGGTCGGAGGGATTTCATCTGTTCATCAGCTTCACGAGAAAACCGGTCATAAAGCCCACTCATTCAGCCATCTCATAAACCGCGGAGATTTGAAAAAAGTCATTAGAGGTAAGGGTTTGTGGAAAGAAAAGTTACGCCCAT
TTGCAGAAAGTGTATGATCGGAGGTCGTAGGGTTTTCGTCGAAGAAAAGAGTGGTTTTAAGTAGGAGTGAGACTGGTTGGAGCTGCTGCTACTTGCTAAGCGTGTGTATTTATTGTGGGATATTCCTCTACCGACTCCATAAGgtaaatgttggattataaggtgcattagtttttatgaaagttggaaatgagcggttg
acatcccatgtttcatttgtctttcgatgatcaagaaagatgtgttgacatttgaataaaatcgagagaaagttacattatttgcaagttaattctgcaagaggtggtttggttccaatggttaaagaaatttagtgatctgtttaagtgttaagcatcttacaggaaattcagggctgtcgaccctagagtttgaagtc
ttttttagatactcagcattgcctggcgtaggaatttgcagtaagtcaaatattttgagatcagaatggcgaactttgcaagcaacagtttataatgtgaatagttttaagaagcctttattcatgtcgtaggcattgcattgtctaggaatttcaatttacaattatgtagtctctcgaatttaaaatatagaggtcct
agaatagatcagtttatactgtatatctaatgcatgcattttctggagtgttaatgagggttgtgggatttttggagttaaaagAAACAGGAGTCGGAATTGATAGGAGAACGAGGCAGTGATCAAGGGCTTTGTAGAGATTTCACCTGATAAAATGGAGCAGCAAGCGCCAGGCCAGCAGCAGCCAGTTATGGGAGTTG
TAAGTGGTCCACCTCAGATGCCCTATGGAACGGCCCCTTATCAAACAGCTCAGTTGGTTGCACCTGTTGCTCCAGCCTCTGTTGTTGGAACTGTTCAGTCTCCTGGCCAGCCTGCTTCTGCATATCCTGCATCTGCTGCTCAGCTAGCTGCACAACATCAGTTAGCTTACCAGCATCTTCACCAGCAACAACAGCAGCAG
CAACAGCAACAGCTGCAAATATTTTGGGCAAATCAGATGCATGATATAGAACAAACATCAGACTTCAAGAATCATAGCTTGCCATTGGCTAGAATCAAGAAAATTATGAAGGCAGATGAAGATGTGAGGATGATTTCAGCTGAGGCGCCTGTGATTTTTGCAAAAGCTTGTGAAATGTTCATTTTGGAGCTTACCCTGCG
CTCATGGATTCATACAGAGGAAAATAAGCGACGCACTTTACAGAAGAATGACATTGCAGCTGCCATAACTAGAACAGATATATTTGATTTTCTTGTGGATATTGTGCCAAGAGATGAGTTGAAGGAGGAGGGTCTTGGCATTCCTAGAGGTCCTGTACCTGTTGGAACTCCAGCTGAAGCTATACCATATTATTATGTTC
CTCAGCAGCATCCAGGACAAGTTGCGCCTCCTGGAATGATCGTTGGCAAGCCAGTGGATCCTGCAATGTATGCTCAACAACCTCGTCCTCCTGTTGCTTATATGCCGCCACAGATGTGGCCACAACAACAAATGCCAGAGCAATCCAGGGGTCCATCCTCTAGCAGTTAGGTTATTTGGGTTGTTTCCTGTTGCCAGCAA
CAGGTAAATGGTAAGAGGGAAAATGACAAATCCCTATTTTGATTATGTGGAAAGGCGTATGCTCAAGTTCAATCTGGTAAGAGTTGTTTGACCTGCCCTGTAGAAATGATTTATAAACCAAGGATCGATTTGAGCAAGTTCTTGTGTTTTCTGTTGTGCTCTCCAAGCCTCCACAACTTTAAAATTCTGGCTGGATATTT
TGCATGAAATTGTTTCATGCCCATCTTCATTTGAACGGAATTAAGAGATGCTGTGAACATTTTTGTTTTTTGATACATGCA
Intron 3 GTAAGCATTC ... TTGGATACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 21.43 | 66 | 18 | 17 |
| A2 | 22.22 | 63 | 18 | 1 |
| A3 | 23.94 | 54 | 17 | 2 |
| A4 | 31.03 | 60 | 27 | 4 |
| A5 | 21.28 | 37 | 10 | 0 |
| A6 | 22.26 | 248 | 71 | 11 |
| A7 | 22.89 | 192 | 57 | 8 |
| A8 | 16.67 | 125 | 25 | 3 |
| A9 | 16.18 | 145 | 28 | 9 |
| A10 | 21.35 | 151 | 41 | 6 |
>TRINITY_DN114086_c0_g1_i14 from sample A1 / Example spliced isoformTTCGTTGACAAGAGTAGCCATTCTATTTCTTCTTTCTTCGCTTTGTGTGCGAGGGAGAGAGGTCGGAGGGATTTCATCTGTTCATCAGCTTCACGAGAAAACCGGTCATAAAGCCCACTCATTCAGCCATCTCATAAACCGCGGAGATTTGAAAAAAGTCATTAGAGGTAAGGGTTTGTGGAAAGAAAAGTTACGCCCAT
TTGCAGAAAGTGTATGATCGGAGGTCGTAGGGTTTTCGTCGAAGAAAAGAGTGGTTTTAAGTAGGAGTGAGACTGGTTGGAGCTGCTGCTACTTGCTAAGCGTGTGTATTTATTGTGGGATATTCCTCTACCGACTCCATAAGGTAAATGTTGGATTATAAGGTGCATTAGTTTTTATGAAAGTTGGAAATGAGCGGTTG
ACATCCCATGTTTCATTTGTCTTTCGATGATCAAGAAAGATGTGTTGACATTTGAATAAAATCGAGAGAAAGTTACATTATTTGCAAGTTAATTCTGCAAGAGGTGGTTTGGTTCCAATGGTTAAAGAAATTTAGTGATCTGTTTAAGTGTTAAGCATCTTACAGGAAATTCAGGGCTGTCGACCCTAGAGTTTGAAGTC
TTTTTTAGATACTCAGCATTGCCTGGCGTAGGAATTTGCAGTAAGTCAAATATTTTGAGATCAGAATGGCGAACTTTGCAAGCAACAGTTTATAATGTGAATAGTTTTAAGAAGCCTTTATTCATGTCGTAGGCATTGCATTGTCTAGGAATTTCAATTTACAATTATGTAGTCTCTCGAATTTAAAATATAGAGGTCCT
AGAATAGATCAGTTTATACTGTATATCTAATGCATGCATTTTCTGGAGTGTTAATGAGGGTTGTGGGATTTTTGGAGTTAAAAGAAACAGGAGTCGGAATTGATAGGAGAACGAGGCAGTGATCAAGGGCTTTGTAGAGATTTCACCTGATAAAATGGAGCAGCAAGCGCCAGGCCAGCAGCAGCCAGTTATGGGAGTTG
TAAGTGGTCCACCTCAGATGCCCTATGGAACGGCCCCTTATCAAACAGCTCAGTTGGTTGCACCTGTTGCTCCAGCCTCTGTTGTTGGAACTGTTCAGTCTCCTGGCCAGCCTGCTTCTGCATATCCTGCATCTGCTGCTCAGCTAGCTGCACAACATCAGTTAGCTTACCAGCATCTTCACCAGCAACAACAGCAGCAG
CAACAGCAACAGCTGCAAATATTTTGGGCAAATCAGATGCATGATATAGAACAAACATCAGACTTCAAGAATCATAGCTTGCCATTGGCTAGAATCAAGAAAATTATGAAGGCAGATGAAAATTATGAAGGCATGAATTACCCTCCACAGTCTTAATTATTATCTCACTTCATTAA
>TRINITY_DN114086_c0_g1_i7 from sample A1 / Example unspliced isoform:TTCGTTGACAAGAGTAGCCATTCTATTTCTTCTTTCTTCGCTTTGTGTGCGAGGGAGAGAGGTCGGAGGGATTTCATCTGTTCATCAGCTTCACGAGAAAACCGGTCATAAAGCCCACTCATTCAGCCATCTCATAAACCGCGGAGATTTGAAAAAAGTCATTAGAGGTAAGgtaagcattctttcacagtttttgtagt
gttttgaaaccctaagggttttgggtttgcgaattaatgtttttcgattggcggtatcgatgaaatatctatgctggttctctttgtctacaatgtcgtagtttgtttctcaggacatcggtttgaagtttccagagtgaaacagagttatttgatggggttttaaactgtttgtttcagtcattcttgaggaaaaatct
ttcgggttctgggtaccttgaatattaaagaaaaggctaatctttggatacagGGTTTGTGGAAAGAAAAGTTACGCCCATTTGCAGAAAGTGTATGATCGGAGGTCGTAGGGTTTTCGTCGAAGGTACGTGGCGTGCTTCCTTTCCCATCTTCTTAAGATAGCCAGGGATTCATAATTATTGAAGCTATTTCTAGTTTA
CTGAATTGGGAGTCTTTGTATGAGGTGTCAATTAAACAAAGTCTGCCCTGCAAGGGTTTTTAGAAGTCAGGGTAGGAAAACATGAAATCGGTATTGGTGAGTGAGGAGTAACTAGGAGGGATATCGAAGCAATGAAATTTTCGGAAATTTAAATATGAAGCGATTGGCGGACATTCTACTGCATTCGAAGTATTTGTCTA
AGATTTCTGGGATTAATTAAACTTGTTCTGCAAAATGCTAGGGTTTTTAGATGTAATGGTTTGATCTTTATAACATTAAGTGGGTATAGGAGAGTAATAAGTAGTTAGCAGGGGTTTTGAAAGCAATGAAGATTCCATAAATATTAGTATGAAGTTATGGATAGTCGCCTGCATCGAAATTCTTGGCATGGGATATTCTG
GTGTTAATTGAAATTAATTCTGCAGTATGTGGGGGTTTTTATACTCTATGGTTTGAAAACCTTTAATGAGTATTGGAGAGCAATAAGTTACCAAGAGGGATTTTTAGATTTTAGAAATATTAATATGAAACCTCTGGGTTCGTGGTCCCAACTAGTAATTATCAGGAAATCGAAGCTTGCAAACTGTGTT
Intron 4 GTAAGGTAAG ... TTGGATACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 21.43 | 66 | 18 | 17 |
| A2 | 23.86 | 67 | 21 | 1 |
| A3 | 30.85 | 65 | 29 | 2 |
| A4 | 32.18 | 59 | 28 | 4 |
| A5 | 19.57 | 37 | 9 | 0 |
| A6 | 23.26 | 254 | 77 | 11 |
| A7 | 24.05 | 199 | 63 | 8 |
| A8 | 17.95 | 128 | 28 | 3 |
| A9 | 19.15 | 152 | 36 | 9 |
| A10 | 21.54 | 153 | 42 | 6 |
>TRINITY_DN114086_c0_g1_i5 from sample A1 / Example spliced isoformTTCGTTGACAAGAGTAGCCATTCTATTTCTTCTTTCTTCGCTTTGTGTGCGAGGGAGAGAGGTCGGAGGGATTTCATCTGTTCATCAGCTTCACGAGAAAACCGGTCATAAAGCCCACTCATTCAGCCATCTCATAAACCGCGGAGATTTGAAAAAAGTCATTAGAGGGTTTGTGGAAAGAAAAGTTACGCCCATTTGCA
GAAAGTGTATGATCGGAGGTCGTAGGGTTTTCGTCGAAGAAAAGAGTGGTTTTAAGTAGGAGTGAGACTGGTTGGAGCTGCTGCTACTTGCTAAGCGTGTGTATTTATTGTGGGATATTCCTCTACCGACTCCATAAGAAACAGGAGTCGGAATTGATAGGAGAACGAGGCAGTGATCAAGGGCTTTGTAGAGATTTCAC
CTGATAAAATGGAGCAGCAAGCGCCAGGCCAGCAGCAGCCAGTTATGGGAGTTGTAAGTGGTCCACCTCAGATGCCCTATGGAACGGCCCCTTATCAAACAGCTCAGTTGGTTGCACCTGTTGCTCCAGCCTCTGTTGTTGGAACTGTTCAGTCTCCTGGCCAGCCTGCTTCTGCATATCCTGCATCTGCTGCTCAGCTA
GCTGCACAACATCAGTTAGCTTACCAGCATCTTCACCAGCAACAACAGCAGCAGCAACAGCAACAGCTGCAAATATTTTGGGCAAATCAGATGCATGATATAGAACAAACATCAGACTTCAAGAATCATAGCTTGCCATTGGCTAGAATCAAGAAAATTATGAAGGCAGATGAAAATTATGAAGGCATGAATTACCCTCC
ACAGTCTTAATTATTATCTCACTTCATTAA
>TRINITY_DN114086_c0_g1_i7 from sample A1 / Example unspliced isoform:TTCGTTGACAAGAGTAGCCATTCTATTTCTTCTTTCTTCGCTTTGTGTGCGAGGGAGAGAGGTCGGAGGGATTTCATCTGTTCATCAGCTTCACGAGAAAACCGGTCATAAAGCCCACTCATTCAGCCATCTCATAAACCGCGGAGATTTGAAAAAAGTCATTAGAGgtaaggtaagcattctttcacagtttttgtagt
gttttgaaaccctaagggttttgggtttgcgaattaatgtttttcgattggcggtatcgatgaaatatctatgctggttctctttgtctacaatgtcgtagtttgtttctcaggacatcggtttgaagtttccagagtgaaacagagttatttgatggggttttaaactgtttgtttcagtcattcttgaggaaaaatct
ttcgggttctgggtaccttgaatattaaagaaaaggctaatctttggatacagGGTTTGTGGAAAGAAAAGTTACGCCCATTTGCAGAAAGTGTATGATCGGAGGTCGTAGGGTTTTCGTCGAAGGTACGTGGCGTGCTTCCTTTCCCATCTTCTTAAGATAGCCAGGGATTCATAATTATTGAAGCTATTTCTAGTTTA
CTGAATTGGGAGTCTTTGTATGAGGTGTCAATTAAACAAAGTCTGCCCTGCAAGGGTTTTTAGAAGTCAGGGTAGGAAAACATGAAATCGGTATTGGTGAGTGAGGAGTAACTAGGAGGGATATCGAAGCAATGAAATTTTCGGAAATTTAAATATGAAGCGATTGGCGGACATTCTACTGCATTCGAAGTATTTGTCTA
AGATTTCTGGGATTAATTAAACTTGTTCTGCAAAATGCTAGGGTTTTTAGATGTAATGGTTTGATCTTTATAACATTAAGTGGGTATAGGAGAGTAATAAGTAGTTAGCAGGGGTTTTGAAAGCAATGAAGATTCCATAAATATTAGTATGAAGTTATGGATAGTCGCCTGCATCGAAATTCTTGGCATGGGATATTCTG
GTGTTAATTGAAATTAATTCTGCAGTATGTGGGGGTTTTTATACTCTATGGTTTGAAAACCTTTAATGAGTATTGGAGAGCAATAAGTTACCAAGAGGGATTTTTAGATTTTAGAAATATTAATATGAAACCTCTGGGTTCGTGGTCCCAACTAGTAATTATCAGGAAATCGAAGCTTGCAAACTGTGTT
Intron 5 GTAAATGTTG ... GCATTAAAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 45.28 | 29 | 13 | 24 |
| A2 | 36.71 | 50 | 10 | 29 |
| A3 | 37.93 | 36 | 12 | 22 |
| A4 | 40.35 | 34 | 16 | 23 |
| A5 | 48 | 13 | 5 | 12 |
| A6 | 39.92 | 143 | 10 | 95 |
| A7 | 46.05 | 82 | 17 | 70 |
| A8 | 47.06 | 63 | 10 | 56 |
| A9 | 42.42 | 95 | 12 | 70 |
| A10 | 27.78 | 91 | 37 | 35 |
>TRINITY_DN105799_c0_g1_i3 from sample A3 / Example spliced isoformTATCATTCGTTGACAAGAGTAGCCATTCTATTTCTTCTTTCTTCGCTTTGTGTGCGAGGGAGAGAGGTCGGAGGGATTTCATCTGTTCATCAGCTTCACGAGAAAACCGGTCATAAAGCCCACTCATTCAGCCATCTCATAAACCGCGGAGATTTGAAAAAAGTCATTAGAGGTAAGGGTTTGTGGAAAGAAAAGTTACG
CCCATTTGCAGAAAGTGTATGATCGGAGGTCGTAGGGTTTTCGTCGAAGAAAAGAGTGGTTTTAAGTAGGAGTGAGACTGGTTGGAGCTGCTGCTACTTGCTAAGCGTGTGTATTTATTGTGGGATATTCCTCTACCGACTCCATAAGAAACAGGAGTCGGAATTGATAGGAGAACGAGGCAGTGATCAAGGGCTTTGTA
GAGATTTCACCTGATAAAATGGAGCAGCAAGCGCCAGGCCAGCAGCAGCCAGTTATGGGAGTTGTAAGTGGTCCACCTCAGATGCCCTATGGAACGGCCCCTTATCAAACAGCTCAGTTGGTTGCACCTGTTGCTCCAGCCTCTGTTGTTGGAACTGTTCAGTCTCCTGGCCAGCCTGCTTCTGCATATCCTGCATCTGC
TGCTCAGCTAGCTGCACAACATCAGTTAGCTTACCAGCATCTTCACCAGCAACAACAGCAGCAGCAACAGCAACAGCTGCAAATATTTTGGGCAAATCAGATGCATGATATAGAACAAACATCAGACTTCAAGAATCATAGCTTGCCATTGGCTAGAATCAAGAAAATTATGAAGGCAGATGAAGATGTGAGGATGATTT
CAGCTGAGGCGCCTGTGATTTTTGCAAAAGCTTGTGAAATGTTCATTTTGGAGCTTACCCTGCGCTCATGGATTCATACAGAGGAAAATAAGCGACGCACTTTACAGAAGAATGACATTGCAGCTGCCATAACTAGAACAGATATATTTGATTTTCTTGTGGATATTGTGCCAAGAGATGAGTTGAAGGAGGAGGGTCTT
GGCATTCCTAGAGGTCCTGTACCTGTTGGAACTCCAGCTGAAGCTATACCATATTATTATGTTCCTCAGCAGCATCCAGGACAAGTTGCGCCTCCTGGAATGATCGTTGGCAAGCCAGTGGATCCTGCAATGTATGCTCAACAACCTCGTCCTCCTGTTGCTTATATGCCGCCACAGATGTGGCCACAACAACAAATGCC
AGAGCAATCCAGGGGTCCATCCTCTAGCAGTTAGGTTATTTGGGTTGTTTCCTGTTGCCAGCAACAGGTAAATGGTAAGAGGGAAAATGACAAATCCCTATTTTGATTATGTGGAAAGGCGTATGCTCAAGTTCAATCTGGTAAGAGTTGTTTGACCTGCCCTGTAGAAATGATTTATAAACCAAGGATCGATTTGAGCA
AGTTCTTGTGTTTTCTGTTGTGCTCTCCAAGCCTCCACAACTTTAAAATTCTGGCTGGATATTTTGCATGAAATTGTTTCATGCCCATCTTCATTTGAACGGAATTAAGAGATGCTGTGAACATTTTTGTTTTTTGATACATGCTTTATTTTGTCCAGAC
>TRINITY_DN105799_c0_g1_i2 from sample A3 / Example unspliced isoform:TATCATTCGTTGACAAGAGTAGCCATTCTATTTCTTCTTTCTTCGCTTTGTGTGCGAGGGAGAGAGGTCGGAGGGATTTCATCTGTTCATCAGCTTCACGAGAAAACCGGTCATAAAGCCCACTCATTCAGCCATCTCATAAACCGCGGAGATTTGAAAAAAGTCATTAGAGGTAAGGGTTTGTGGAAAGAAAAGTTACG
CCCATTTGCAGAAAGTGTATGATCGGAGGTCGTAGGGTTTTCGTCGAAGAAAAGAGTGGTTTTAAGTAGGAGTGAGACTGGTTGGAGCTGCTGCTACTTGCTAAGCGTGTGTATTTATTGTGGGATATTCCTCTACCGACTCCATAAGgtaaatgttggattataaggtgcattagtttttatgaaagttggaaatgagc
ggttgacatcccatgtttcatttgtctttcgatgatcaagaaagatgtgttgacatttgaataaaatcgagagaaagttacattatttgcaagttaattctgcaagaggtggtttggttccaatggttaaagaaatttagtgatctgtttaagtgttaagcatcttacaggaaattcagggctgtcgaccctagagtttg
aagtcttttttagatactcagcattgcctggcgtaggaatttgcattaaaagAAACAGGAGTCGGAATTGATAGGAGAACGAGGCAGTGATCAAGGGCTTTGTAGAGATTTCACCTGATAAAATGGAGCAGCAAGCGCCAGGCCAGCAGCAGCCAGTTATGGGAGTTGTAAGTGGTCCACCTCAGATGCCCTATGGAACG
GCCCCTTATCAAACAGCTCAGTTGGTTGCACCTGTTGCTCCAGCCTCTGTTGTTGGAACTGTTCAGTCTCCTGGCCAGCCTGCTTCTGCATATCCTGCATCTGCTGCTCAGCTAGCTGCACAACATCAGTTAGCTTACCAGCATCTTCACCAGCAACAACAGCAGCAGCAACAGCAACAGCTGCAAATATTTTGGGCAAA
TCAGATGCATGATATAGAACAAACATCAGACTTCAAGAATCATAGCTTGCCATTGGCTAGAATCAAGAAAATTATGAAGGCAGATGAAGATGTGAGGATGATTTCAGCTGAGGCGCCTGTGATTTTTGCAAAAGCTTGTGAAATGTTCATTTTGGAGCTTACCCTGCGCTCATGGATTCATACAGAGGAAAATAAGCGAC
GCACTTTACAGAAGAATGACATTGCAGCTGCCATAACTAGAACAGATATATTTGATTTTCTTGTGGATATTGTGCCAAGAGATGAGTTGAAGGAGGAGGGTCTTGGCATTCCTAGAGGTCCTGTACCTGTTGGAACTCCAGCTGAAGCTATACCATATTATTATGTTCCTCAGCAGCATCCAGGACAAGTTGCGCCTCCT
GGAATGATCGTTGGCAAGCCAGTGGATCCTGCAATGTATGCTCAACAACCTCGTCCTCCTGTTGCTTATATGCCGCCACAGATGTGGCCACAACAACAAATGCCAGAGCAATCCAGGGGTCCATCCTCTAGCAGTTAGGTTATTTGGGTTGTTTCCTGTTGCCAGCAACAGGTAAATGGTAAGAGGGAAAATGACAAATC
CCTATTTTGATTATGTGGAAAGGCGTATGCTCAAGTTCAATCTGGTAAGAGTTGTTTGACCTGCCCTGTAGAAATGATTTATAAACCAAGGATCGATTTGAGCAAGTTCTTGTGTTTTCTGTTGTGCTCTCCAAGCCTCCACAACTTTAAAATTCTGGCTGGATATTTTGCATGAAATTGTTTCATGCCCATCTTCATTT
GAACGGAATTAAGAGATGCTGTGAACATTTTTGTTTTTTGATACATGCTTTATTTTGTCCAGAC
Intron 6 GTAAGTCATT ... TTGGATACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 32.31 | 66 | 26 | 37 |
| A2 | 22.09 | 67 | 25 | 13 |
| A3 | 22.62 | 65 | 28 | 10 |
| A4 | 25.32 | 59 | 27 | 13 |
| A5 | 18.68 | 37 | 11 | 6 |
| A6 | 22.09 | 254 | 84 | 60 |
| A7 | 23.17 | 199 | 79 | 41 |
| A8 | 19.5 | 128 | 31 | 31 |
| A9 | 18.06 | 152 | 37 | 30 |
| A10 | 23.12 | 153 | 52 | 40 |
>TRINITY_DN103263_c0_g1_i1 from sample A5 / Example spliced isoformTAGCCATTCTATTTCTTCTTTCTTCGCTTTGTGTGCGAGGGAGAGAGGTCGGAGGGATTTCATCTGTTCATCAGCTTCACGAGAAAACCGGTCATAAAGCCCACTCATTCAGCCATCTCATAAACCGCGGAGATTTGAAAAAAGTCATTAGAGGGTTTGTGGAAAGAAAAGTTACGCCCATTTGCAGAAAGTGTATGATC
GGAGGTCGTAGGGTTTTCGTCGAAGAAAAGAGTGGTTTTAAGTAGGAGTGAGACTGGTTGGAGCTGCTGCTACTTGCTAAGCGTGTGTATTTATTGTGGGATATTCCTCTACCGACTCCATAAGAAACAGGAGTCGGAATTGATAGGAGAACGAGGCAGTGATCAAGGGCTTTGTAGAGATTTCACCTGATAAAATGGAG
CAGCAAGCGCCAGGCCAGCAGCAGCCAGTTATGGGAGTTGTAAGTGGTCCACCTCAGATGCCCTATGGAACGGCCCCTTATCAAACAGCTCAGTTGGTTGCACCTGTTGCTCCAGCCTCTGTTGTTGGAACTGTTCAGTCTCCTGGCCAGCCTGCTTCTGCATATCCTGCATCTGCTGCTCAGCTAGCTGCACAACATCA
GTTAGCTTACCAGCATCTTCACCAGCAACAACAGCAGCAGCAACAGCAACAGCTGCAAATATTTTGGGCAAATCAGATGCATGATATAGAACAAACATCAGACTTCAAGAATCATAGCTTGCCATTGGCTAGAATCAAGAAAATTATGAAGGCAGATGAAGATGTGAGGATGATTTCAGCTGAGGCGCCTGTGATTTTTG
CAAAAGCTTGTGAAATGTTCATTTTGGAGCTTACCCTGCGCTCATGGATTCATACAGAGGAAAATAAGCGACGCACTTTACAGAAGAATGACATTGCAGCTGCCATAACTAGAACAGATATATTTGATTTTCTTGTGGATATTGTGCCAAGAGATGAGTTGAAGGAGGAGGGTCTTGGCATTCCTAGAGGTCCTGTACCT
GTTGGAACTCCAGCTGAAGCTATACCATATTATTATGTTCCTCAGCAGCATCCAGGACAAGTTGCGCCTCCTGGAATGATCGTTGGCAAGCCAGTGGATCCTGCAATGTATGCTCAACAACCTCGTCCTCCTGTTGCTTATATGCCGCCACAGATGTGGCCACAACAACAAATGCCAGAGCAATCCAGGGGTCCATCCTC
TAGCAGTTAGGTTATTTGGGTTGTTTCCTGTTGCCAGCAACAGGTAAATGGTA
>TRINITY_DN103263_c0_g1_i2 from sample A5 / Example unspliced isoform:TAGCCATTCTATTTCTTCTTTCTTCGCTTTGTGTGCGAGGGAGAGAGGTCGGAGGGATTTCATCTGTTCATCAGCTTCACGAGAAAACCGGTCATAAAGCCCACTCATTCAGCCATCTCATAAACCGCGGAGATTTGAAAAAAGTCATTAGAGgtaagtcattcttgaggaaaaatctttcgggttctgggtaccttgaa
tattaaagaaaaggctaatctttggatacagGGTTTGTGGAAAGAAAAGTTACGCCCATTTGCAGAAAGTGTATGATCGGAGGTCGTAGGGTTTTCGTCGAAGAAAAGAGTGGTTTTAAGTAGGAGTGAGACTGGTTGGAGCTGCTGCTACTTGCTAAGCGTGTGTATTTATTGTGGGATATTCCTCTACCGACTCCATA
AGAAACAGGAGTCGGAATTGATAGGAGAACGAGGCAGTGATCAAGGGCTTTGTAGAGATTTCACCTGATAAAATGGAGCAGCAAGCGCCAGGCCAGCAGCAGCCAGTTATGGGAGTTGTAAGTGGTCCACCTCAGATGCCCTATGGAACGGCCCCTTATCAAACAGCTCAGTTGGTTGCACCTGTTGCTCCAGCCTCTGT
TGTTGGAACTGTTCAGTCTCCTGGCCAGCCTGCTTCTGCATATCCTGCATCTGCTGCTCAGCTAGCTGCACAACATCAGTTAGCTTACCAGCATCTTCACCAGCAACAACAGCAGCAGCAACAGCAACAGCTGCAAATATTTTGGGCAAATCAGATGCATGATATAGAACAAACATCAGACTTCAAGAATCATAGCTTGC
CATTGGCTAGAATCAAGAAAATTATGAAGGCAGATGAAGATGTGAGGATGATTTCAGCTGAGGCGCCTGTGATTTTTGCAAAAGCTTGTGAAATGTTCATTTTGGAGCTTACCCTGCGCTCATGGATTCATACAGAGGAAAATAAGCGACGCACTTTACAGAAGAATGACATTGCAGCTGCCATAACTAGAACAGATATA
TTTGATTTTCTTGTGGATATTGTGCCAAGAGATGAGTTGAAGGAGGAGGGTCTTGGCATTCCTAGAGGTCCTGTACCTGTTGGAACTCCAGCTGAAGCTATACCATATTATTATGTTCCTCAGCAGCATCCAGGACAAGTTGCGCCTCCTGGAATGATCGTTGGCAAGCCAGTGGATCCTGCAATGTATGCTCAACAACC
TCGTCCTCCTGTTGCTTATATGCCGCCACAGATGTGGCCACAACAACAAATGCCAGAGCAATCCAGGGGTCCATCCTCTAGCAGTTAGGTTATTTGGGTTGTTTCCTGTTGCCAGCAACAGGTAAATGGTA
Intron 7 GTAAATGTTG ... CATCTTACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 47.6 | 14 | 11.7 | 13.9 |
| A2 | 28.93 | 13 | 8.7 | 2.1 |
| A3 | 49.39 | 7 | 11.5 | 2.3 |
| A4 | 70.14 | 7 | 15.2 | 17.7 |
| A5 | 54.73 | 3 | 5.3 | 2 |
| A6 | 16.12 | 32 | 7.3 | 5.3 |
| A7 | 33.87 | 32 | 14.6 | 18.4 |
| A8 | 20.35 | 35 | 9.5 | 8.5 |
| A9 | 14.91 | 35 | 9.1 | 3.6 |
| A10 | 31.69 | 40 | 33.5 | 3.9 |
>TRINITY_DN114086_c0_g1_i6 from sample A1 / Example spliced isoformTTCGTTGACAAGAGTAGCCATTCTATTTCTTCTTTCTTCGCTTTGTGTGCGAGGGAGAGAGGTCGGAGGGATTTCATCTGTTCATCAGCTTCACGAGAAAACCGGTCATAAAGCCCACTCATTCAGCCATCTCATAAACCGCGGAGATTTGAAAAAAGTCATTAGAGGTAAGGGTTTGTGGAAAGAAAAGTTACGCCCAT
TTGCAGAAAGTGTATGATCGGAGGTCGTAGGGTTTTCGTCGAAGAAAAGAGTGGTTTTAAGTAGGAGTGAGACTGGTTGGAGCTGCTGCTACTTGCTAAGCGTGTGTATTTATTGTGGGATATTCCTCTACCGACTCCATAAGGAAATTCAGGGCTGTCGACCCTAGAGTTTGAAGTCTTTTTTAGATACTCAGCATTGC
CTGGCGTAGGAATTTGCAAAACAGGAGTCGGAATTGATAGGAGAACGAGGCAGTGATCAAGGGCTTTGTAGAGATTTCACCTGATAAAATGGAGCAGCAAGCGCCAGGCCAGCAGCAGCCAGTTATGGGAGTTGTAAGTGGTCCACCTCAGATGCCCTATGGAACGGCCCCTTATCAAACAGCTCAGTTGGTTGCACCTG
TTGCTCCAGCCTCTGTTGTTGGAACTGTTCAGTCTCCTGGCCAGCCTGCTTCTGCATATCCTGCATCTGCTGCTCAGCTAGCTGCACAACATCAGTTAGCTTACCAGCATCTTCACCAGCAACAACAGCAGCAGCAACAGCAACAGCTGCAAATATTTTGGGCAAATCAGATGCATGATATAGAACAAACATCAGACTTC
AAGAATCATAGCTTGCCATTGGCTAGAATCAAGAAAATTATGAAGGCAGATGAAGATGTGAGGATGATTTCAGCTGAGGCGCCTGTGATTTTTGCAAAAGCTTGTGAAATGTTCATTTTGGAGCTTACCCTGCGCTCATGGATTCATACAGAGGAAAATAAGCGACGCACTTTACAGAAGAATGACATTGCAGCTGCCAT
AACTAGAACAGATATATTTGATTTTCTTGTGGATATTGTGCCAAGAGATGAGTTGAAGGAGGAGGGTCTTGGCATTCCTAGAGGTCCTGTACCTGTTGGAACTCCAGCTGAAGCTATACCATATTATTATGTTCCTCAGCAGCATCCAGGACAAGTTGCGCCTCCTGGAATGATCGTTGGCAAGCCAGTGGATCCTGCAA
TGTATGCTCAACAACCTCGTCCTCCTGTTGCTTATATGCCGCCACAGATGTGGCCACAACAACAAATGCCAGAGCAATCCAGGGGTCCATCCTCTAGCAGTTAGGTTATTTGGGTTGTTTCCTGTTGCCAGCAACAGGTAAATGGTAAGAGGGAAAATGACAAATCCCTATTTTGATTATGTGGAAAGGCGTATGCTCAA
GTTCAATCTGGTAAGAGTTGTTTGACCTGCCCTGTAGAAATGATTTATAAACCAAGGATCGATTTGAGCAAGTTCTTGTGTTTTCTGTTGTGCTCTCCAAGCCTCCACAACTTTAAAATTCTGGCTGGATATTTTGCATGAAATTGTTTCATGCCCATCTTCATTTGAACGGAATTAAGAGATGCTGTGAACATTTTTGT
TTTTTGATACATGCA
>TRINITY_DN114086_c0_g1_i14 from sample A1 / Example unspliced isoform:TTCGTTGACAAGAGTAGCCATTCTATTTCTTCTTTCTTCGCTTTGTGTGCGAGGGAGAGAGGTCGGAGGGATTTCATCTGTTCATCAGCTTCACGAGAAAACCGGTCATAAAGCCCACTCATTCAGCCATCTCATAAACCGCGGAGATTTGAAAAAAGTCATTAGAGGTAAGGGTTTGTGGAAAGAAAAGTTACGCCCAT
TTGCAGAAAGTGTATGATCGGAGGTCGTAGGGTTTTCGTCGAAGAAAAGAGTGGTTTTAAGTAGGAGTGAGACTGGTTGGAGCTGCTGCTACTTGCTAAGCGTGTGTATTTATTGTGGGATATTCCTCTACCGACTCCATAAGgtaaatgttggattataaggtgcattagtttttatgaaagttggaaatgagcggttg
acatcccatgtttcatttgtctttcgatgatcaagaaagatgtgttgacatttgaataaaatcgagagaaagttacattatttgcaagttaattctgcaagaggtggtttggttccaatggttaaagaaatttagtgatctgtttaagtgttaagcatcttacagGAAATTCAGGGCTGTCGACCCTAGAGTTTGAAGTC
TTTTTTAGATACTCAGCATTGCCTGGCGTAGGAATTTGCAGTAAGTCAAATATTTTGAGATCAGAATGGCGAACTTTGCAAGCAACAGTTTATAATGTGAATAGTTTTAAGAAGCCTTTATTCATGTCGTAGGCATTGCATTGTCTAGGAATTTCAATTTACAATTATGTAGTCTCTCGAATTTAAAATATAGAGGTCCT
AGAATAGATCAGTTTATACTGTATATCTAATGCATGCATTTTCTGGAGTGTTAATGAGGGTTGTGGGATTTTTGGAGTTAAAAGAAACAGGAGTCGGAATTGATAGGAGAACGAGGCAGTGATCAAGGGCTTTGTAGAGATTTCACCTGATAAAATGGAGCAGCAAGCGCCAGGCCAGCAGCAGCCAGTTATGGGAGTTG
TAAGTGGTCCACCTCAGATGCCCTATGGAACGGCCCCTTATCAAACAGCTCAGTTGGTTGCACCTGTTGCTCCAGCCTCTGTTGTTGGAACTGTTCAGTCTCCTGGCCAGCCTGCTTCTGCATATCCTGCATCTGCTGCTCAGCTAGCTGCACAACATCAGTTAGCTTACCAGCATCTTCACCAGCAACAACAGCAGCAG
CAACAGCAACAGCTGCAAATATTTTGGGCAAATCAGATGCATGATATAGAACAAACATCAGACTTCAAGAATCATAGCTTGCCATTGGCTAGAATCAAGAAAATTATGAAGGCAGATGAAAATTATGAAGGCATGAATTACCCTCCACAGTCTTAATTATTATCTCACTTCATTAA
Intron 8 GTAAGGTAAG ... TTTGTTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 40 | 27 | 18 | 8 |
| A2 | 47.73 | 23 | 21 | 1 |
| A3 | 51.79 | 27 | 29 | 2 |
| A4 | 53.85 | 24 | 28 | 1 |
| A5 | 45 | 11 | 9 | 1 |
| A6 | 46.39 | 89 | 77 | 7 |
| A7 | 44.37 | 79 | 63 | 7 |
| A8 | 50 | 28 | 28 | 0 |
| A9 | 48.65 | 38 | 36 | 4 |
| A10 | 46.15 | 49 | 42 | 5 |
>TRINITY_DN114086_c0_g1_i3 from sample A1 / Example spliced isoformTTCGTTGACAAGAGTAGCCATTCTATTTCTTCTTTCTTCGCTTTGTGTGCGAGGGAGAGAGGTCGGAGGGATTTCATCTGTTCATCAGCTTCACGAGAAAACCGGTCATAAAGCCCACTCATTCAGCCATCTCATAAACCGCGGAGATTTGAAAAAAGTCATTAGAGTCATTCTTGAGGAAAAATCTTTCGGGTTCTGGG
TACCTTGAATATTAAAGAAAAGGCTAATCTTTGGATACAGGGTTTGTGGAAAGAAAAGTTACGCCCATTTGCAGAAAGTGTATGATCGGAGGTCGTAGGGTTTTCGTCGAAGAAAAGAGTGGTTTTAAGTAGGAGTGAGACTGGTTGGAGCTGCTGCTACTTGCTAAGCGTGTGTATTTATTGTGGGATATTCCTCTACC
GACTCCATAAGAAACAGGAGTCGGAATTGATAGGAGAACGAGGCAGTGATCAAGGGCTTTGTAGAGATTTCACCTGATAAAATGGAGCAGCAAGCGCCAGGCCAGCAGCAGCCAGTTATGGGAGTTGTAAGTGGTCCACCTCAGATGCCCTATGGAACGGCCCCTTATCAAACAGCTCAGTTGGTTGCACCTGTTGCTCC
AGCCTCTGTTGTTGGAACTGTTCAGTCTCCTGGCCAGCCTGCTTCTGCATATCCTGCATCTGCTGCTCAGCTAGCTGCACAACATCAGTTAGCTTACCAGCATCTTCACCAGCAACAACAGCAGCAGCAACAGCAACAGCTGCAAATATTTTGGGCAAATCAGATGCATGATATAGAACAAACATCAGACTTCAAGAATC
ATAGCTTGCCATTGGCTAGAATCAAGAAAATTATGAAGGCAGATGAAGATGTGAGGATGATTTCAGCTGAGGCGCCTGTGATTTTTGCAAAAGCTTGTGAAATGTTCATTTTGGAGCTTACCCTGCGCTCATGGATTCATACAGAGGAAAATAAGCGACGCACTTTACAGAAGAATGACATTGCAGCTGCCATAACTAGA
ACAGATATATTTGATTTTCTTGTGGATATTGTGCCAAGAGATGAGTTGAAGGAGGAGGGTCTTGGCATTCCTAGAGGTCCTGTACCTGTTGGAACTCCAGCTGAAGCTATACCATATTATTATGTTCCTCAGCAGCATCCAGGACAAGTTGCGCCTCCTGGAATGATCGTTGGCAAGCCAGTGGATCCTGCAATGTATGC
TCAACAACCTCGTCCTCCTGTTGCTTATATGCCGCCACAGATGTGGCCACAACAACAAATGCCAGAGCAATCCAGGGGTCCATCCTCTAGCAGTTAGGTTATTTGGGTTGTTTCCTGTTGCCAGCAACAGGTAAATGGTAAGAGGGAAAATGACAAATCCCTATTTTGATTATGTGGAAAGGCGTATGCTCAAGTTCAAT
CTGGTAAGAGTTGTTTGACCTGCCCTGTAGAAATGATTTATAAACCAAGGATCGATTTGAGCAAGTTCTTGTGTTTTCTGTTGTGCTCTCCAAGCCTCCACAACTTTAAAATTCTGGCTGGATATTTTGCATGAAATTGTTTCATGCCCATCTTCATTTGAACGGAATTAAGAGATGCTGTGAACATTTTTGTTTTTTGA
TACATGCA
>TRINITY_DN114086_c0_g1_i7 from sample A1 / Example unspliced isoform:TTCGTTGACAAGAGTAGCCATTCTATTTCTTCTTTCTTCGCTTTGTGTGCGAGGGAGAGAGGTCGGAGGGATTTCATCTGTTCATCAGCTTCACGAGAAAACCGGTCATAAAGCCCACTCATTCAGCCATCTCATAAACCGCGGAGATTTGAAAAAAGTCATTAGAGgtaaggtaagcattctttcacagtttttgtagt
gttttgaaaccctaagggttttgggtttgcgaattaatgtttttcgattggcggtatcgatgaaatatctatgctggttctctttgtctacaatgtcgtagtttgtttctcaggacatcggtttgaagtttccagagtgaaacagagttatttgatggggttttaaactgtttgtttcagTCATTCTTGAGGAAAAATCT
TTCGGGTTCTGGGTACCTTGAATATTAAAGAAAAGGCTAATCTTTGGATACAGGGTTTGTGGAAAGAAAAGTTACGCCCATTTGCAGAAAGTGTATGATCGGAGGTCGTAGGGTTTTCGTCGAAGGTACGTGGCGTGCTTCCTTTCCCATCTTCTTAAGATAGCCAGGGATTCATAATTATTGAAGCTATTTCTAGTTTA
CTGAATTGGGAGTCTTTGTATGAGGTGTCAATTAAACAAAGTCTGCCCTGCAAGGGTTTTTAGAAGTCAGGGTAGGAAAACATGAAATCGGTATTGGTGAGTGAGGAGTAACTAGGAGGGATATCGAAGCAATGAAATTTTCGGAAATTTAAATATGAAGCGATTGGCGGACATTCTACTGCATTCGAAGTATTTGTCTA
AGATTTCTGGGATTAATTAAACTTGTTCTGCAAAATGCTAGGGTTTTTAGATGTAATGGTTTGATCTTTATAACATTAAGTGGGTATAGGAGAGTAATAAGTAGTTAGCAGGGGTTTTGAAAGCAATGAAGATTCCATAAATATTAGTATGAAGTTATGGATAGTCGCCTGCATCGAAATTCTTGGCATGGGATATTCTG
GTGTTAATTGAAATTAATTCTGCAGTATGTGGGGGTTTTTATACTCTATGGTTTGAAAACCTTTAATGAGTATTGGAGAGCAATAAGTTACCAAGAGGGATTTTTAGATTTTAGAAATATTAATATGAAACCTCTGGGTTCGTGGTCCCAACTAGTAATTATCAGGAAATCGAAGCTTGCAAACTGTGTT