sp|Q93ZS1|LPAH2_ARATH ----> P-loop NTPase domain-containing protein LPA1 homolog 2
Intron 1 GTAAGAAATC ... TCTTAAACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 71.03 | 21 | 51 | 52 |
| A2 | 64.14 | 26 | 45 | 48 |
| A3 | 66.25 | 27 | 56 | 50 |
| A4 | 63.1 | 31 | 38 | 68 |
| A5 | 78.26 | 5 | 22 | 14 |
| A6 | 55.56 | 8 | 6 | 14 |
| A7 | 62.64 | 17 | 33 | 24 |
| A8 | 67.74 | 5 | 12 | 9 |
| A9 | 72.65 | 16 | 40 | 45 |
| A10 | 70.73 | 18 | 48 | 39 |
>TRINITY_DN43291_c0_g1_i13 from sample A8 / Example spliced isoformCGGCTATCTTTGTTACCATGCTTGGCCCCCGGCTGGCAAGCGCTAAACCGCCCCCCTTAACTAGGGTTAGTTACAGGAGTCAGCCGAGTCGAATAGCAGGCGCAGCGGGAAATAAATGATATACTGTAAATGCACTCAGCGTGAGATATCGCCTCCATTTTTAGTTATCCAGCGTCTCTGAACAAACATTTGAGGTTGTA
GCAGGTCTTGGCTTTAACTACCAGGTAATGGCAGATGTACATAAACTGTTCTATATCATTGTACTAGATGAAGATTCACAGGGTGAATGGACAGGAGAAGAATCACCTTCTCTGTTTTTCCAAAAATCAAATCATTCTTTTCGGTATACACGTCCAGTTTTACAGAGCATATTGCAGTTAATGGGTTGCAAACAACGCCA
CTCATTTAAGATTACGAAAAAGGTGTTTGAGATAATCAAGGATGAAATTCCTGTCGATCTTGATGGGAATGGAAGTTCATTAATAAATGTCCATCAAAAGTTTTCTGAGGTCAGAAAAGACAACTTAGAAGGTTGCTATGTTGAGCAAGAACAATTGACAAAACCTACAGCCAATGAAAAGGGTATCTGTAATGACAACG
ACAAGAAACCAACTTTCTGCAAGAAGCGGATTACAGTTGTAGTAAAAAGGGAGAAATTTCTAGATATAGTTTGTGGTGCCCTTTCTGAATATCGCTATGTTAGTCCGAATCAAAGATTGGATTTGATTATAGCATGCAGAATACGTGAGCATAAGGAATCAATGACTATTTTGCTTTGTGGAACTAGTGGATGTGGCAAG
TCAACATTATCTTCTTTATTGGCTAGTAGACTTGGCATTACAACTGTTGTTTCTACTGACTCAATACGCCACATGATGAGGAGTTTTGTGGATGAAAAGGAAAACCCTTTATTATGGGCCTCAACATATCATGCTGGTGAGTGTTTAGATCCAGTTGCTGTAGCCGAAGCAAAGGCTAAAAAGAAAGATAAAAAATTTTC
AGGGCGACCTCCAAATGGACAATCGATCAGAATAGAGCCTGGGATGTTTTCAAAGACTGATGATCAAGCTGAGTATAATTTCCGACATGAGACTCTGGGAGAAAACCAATTCAAATCTGATAATCTTGAGAAGGAAGGATTTGATGCTAATAGTGGTGCAGACGTAATTGGACGCAAAGCTATGGCTGTTGAGGGGTACA
AGGCACAAAGTGAGATGGTGATTGAAAGCCTTGACAGGTTGATCAGTGCATGGGAAGAAAGGAAGGAATCTGTTGTGGTTGAAGGTGTGCATTTGAGTCTGAACTTTGTGATGGGGCTCATGAAAAAACATCCATCAATTATACCGTTCATGATCTACATTGCAAATGAAGAGAAGCATTTAGAGCGCTTTGCCATTCGT
GCAAAATATATGACCTTAGATCCTGCAAAGAACAAGTATGTTAAGTACATTCGTAATATCCGGGCAATCCAGGATTACCTGTGCAAACGAGCTGACAAACGTATAGTTCCAAAGGTCAATAATACTAATGTGGATAAAAGTGTGGCCTCTATACATGCTACAATATTTAGCTGTTTACGCAGACGAGAGACAGGTGAACA
CCTCTATGATCAGGCTACAAATACAGTCAAGGTAGTAGATGAAGAGTATCATAATGTTTGTGCTGCAAATTCACTTAGCTCAAAGGGTATGTTTAAGCTTATTCAGAGACAAGGCTCTTTTCGGCGTCTGATGGCACTAGTTAATACTGATGGATCTGTTGCAAAGGCATGGCCAGTTGACGTAGTAGATAGTAATGGTA
AACCTGTTTCAAACTATGGGAGTGATAGTTGTGTTGGGAGTCCCATGTATGGACCTTTACAGATTGGAAAGGAAGAGCCTGTTAACCTTCAGTTTGGTAATTTTGGTATTAGTTCCTGGCCTAATGACACTTCTGGTGCAAGCCATGCCAGTAGCATTGATGGTAATGAAGTAAACAGTCGTTATTCTTCTCTTTCAAAC
TCACCCAGGCACTCTGATGGACCTGCAAAGGAGCTCACTGAAGAATTGCCAGTACCAAGCAGTGATGAAGAACCTGATGAAGTGCCTCCTGTTGATTCTGAGGATGAACTCAGTGACTCGAGCGTTAAGCAAGAAGATGAACTAGAAGGTTCTGTTAATGAGGGATCTGCAAGGTCCGATGAAGGATATGAAAATTTGGC
TCCTGATGAACAAGGCGGTGACTATTGGTCAGATAATTCAGGTGGTCAACCAACTATAGGTACTTTAGATGAAAATGAGGAAGATTCAATAATTTTGCCTCTTGACAAAGCGAAGCAACACAGTTTTAGCCATGACGCTTGTTCCTTTAATACGAATCGTACGGGTTTAAAATCGCGTACGTTTGGTAAACGTATTCTTA
ATGAGACGTCATTACAATCTGAATGCTTCTCGAGGAGTCTCTCTCTGGCATCTACCAGAAAATCAAGATCACTTACTTCACAGCATCGCAGTGTCAACATTCGATCCCAAAGTGTCCCTGCTTTTGAAAAGTATACTCAATCAGTAACTAATAAAACGATTTTATAGTAGGTTTCTAGTGGTATATCTTGAAAATAGATA
ATTAGATCTGTTCATGCACAATAGCTATATCTGCTGCAATCTGTATGTAAACCAGGTGTAGAAATACTCAGGAGTATCTCGAATAATAGTAGTGGTTGTCTCTCTGATTTCCAAGGGGTAAAAATCAAATGAATGGTTCTGTAGAGTTGAACAGTTTTGAGAAGTGTATTTACAGCATTTTAGCAGAGGCATTCAATATC
CATTGATCTCATGCCTATGGGTTAAATATTAGCCAGCATTGCATGTGAGAATGATAGCTTTAGTGGAGCTCACCATCAAGCTGTACTTCCTCTTCATGCCTTATATGTGTTTTGGATGGCATCGTCAGAAATAGTTGGAAAGGAAGCATCATCAGTGGAATAATTCAAGAATTTATTGAATTTTTAGGAGATCTTTTTGT
TTTGGAATTTGAGTTGTGTAATCTCAGAGTTCAAATGTAACTCGGGCATCCATGTTCTTGCCGTGCCTGAGGAGGTCTGCACCTCCTCTCTCTTTAATGCAAATCTTATATCAATACAATTTTTTTTTAATTGATCAGATTGTTAAGTCTCG
>TRINITY_DN43291_c0_g1_i4 from sample A8 / Example unspliced isoform:CGGCTATCTTTGTTACCATGCTTGGCCCCCGGCTGGCAAGCGCTAAACCGCCCCCCTTAACTAGGGTTAGTTACAGGAGTCAGCCGAGTCGAATAGCAGGCGCAGCGGGAAATAAATGATATACTGTAAATGCgtaagaaatcatcggatcttctgagttgacagcgcatttttctgaaatttatgcattttgtcgcaat
ttgttaaaatttgactcgaaatttgagccggaacggtcttaaacagACTCAGCGTGAGATATCGCCTCCATTTTTAGTTATCCAGCGTCTCTGAACAAACATTTGAGGTTGTAGCAGGTCTTGGCTTTAACTACCAGGTAATGGCAGATGTACATAAACTGTTCTATATCATTGTACTAGATGAAGATTCACAGGGTGAA
TGGACAGGAGAAGAATCACCTTCTCTGTTTTTCCAAAAATCAAATCATTCTTTTCGGTATACACGTCCAGTTTTACAGAGCATATTGCAGTTAATGGGTTGCAAACAACGCCACTCATTTAAGATTACGAAAAAGGTGTTTGAGATAATCAAGGATGAAATTCCTGTCGATCTTGATGGGAATGGAAGTTCATTAATAAA
TGTCCATCAAAAGTTTTCTGAGGTCAGAAAAGACAACTTAGAAGGTTGCTATGTTGAGCAAGAACAATTGACAAAACCTACAGCCAATGAAAAGGGTATCTGTAATGACAACGACAAGAAACCAACTTTCTGCAAGAAGCGGATTACAGTTGTAGTAAAAAGGGAGAAATTTCTAGATATAGTTTGTGGTGCCCTTTCTG
AATATCGCTATGTTAGTCCGAATCAAAGATTGGATTTGATTATAGCATGCAG
Intron 2 GTAAGAAATC ... AACATTTGAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 56.94 | 38.9 | 50.8 | 52 |
| A2 | 58.5 | 30.8 | 44.5 | 42 |
| A3 | 57.55 | 33.4 | 54.5 | 36 |
| A4 | 60.11 | 34 | 37.5 | 65 |
| A5 | 42.2 | 22.6 | 22 | 11 |
| A6 | 47.62 | 11 | 6 | 14 |
| A7 | 53.11 | 27.4 | 32 | 30 |
| A8 | 51.72 | 9.4 | 12 | 8 |
| A9 | 60.22 | 22.6 | 39.5 | 29 |
| A10 | 57.66 | 29.4 | 47 | 33 |
>TRINITY_DN122167_c8_g1_i3 from sample A1 / Example spliced isoformCGGCCATCTTTGTTACCATGCTTGGCCCCCGGCTGGCAAGCGCTAAACCGCCTCCGTTAACTAGGGTTAGTTACAGGAGTCAGCCGAGTCGAATAGCAGGCGCAGCGGGAAATAAATGATATACTGTAAATGCGTTGTAGCAGGTCTTGGCTTTAACTACCAGGTAATGGCAGATGTACATAAACTGTTCTATATCATTG
TACTAGATGAAGATTCACAGGGTGAATGGACAGGAGAAGAATCACCTTCTCTGTTTTTCCAAAAATCAAATCATTCTTTTCGGTATACACGTCCAGTTTTACAGAGCATATTGCAGTTAATGGGTTGCAAACAACGCCACTCATTTAAGGTGATCCGTTTCTGCCTTGTTTTCTAGTATTTTGGGGCATCTCTACTGATC
TTTCATGCCATCGAAAGTTGGATTTGTAAACCCTATTTGCATTTTGCACTTGTTGCCAGGAATTAGGGAGGCCTGCA
>TRINITY_DN122167_c8_g1_i8 from sample A1 / Example unspliced isoform:CGGCCATCTTTGTTACCATGCTTGGCCCCCGGCTGGCAAGCGCTAAACCGCCCCCCCTTAACTAGGGTTAGTTACAGGAGTCAGCCGAGTCGAATAGCAGGCGCAGCGGGAAATAAATGATATACTGTAAATGCgtaagaaatcatcggatcttctgagttgacagcgcatttttctgaaatttatgcattttgtcgcaa
tttgttaaaatttgactcgaaatttgagccggaacggtcttaaacagactcagcgtgagatatcgcctccatttttagttatccagcgtctctgaacaaacatttgagGTTGTAGCAGGTCTTGGCTTTAACTACCAGGTAATGGCAGATGTACATAAACTGTTCTATATCATTGTACTAGATGAAGATTCACAGGGTGA
ATGGACAGGAGAAGAATCACCTTCTCTGTTTTTCCAAAAATCAAATCATTCTTTTCGGTATACACGTCCAGTTTTACAGAGCATATTGCAGTTAATGGGTTGCAAACAACGCCACTCATTTAAGATTACGAAAAAGGTGTTTGAGATAATCAAGGATGAAATTCCTGTCGATCTTGATGGGAATGGAAGTTCATTAATAA
ATGTCCATCAAAAGTTTTCTGAGGTCAGAAAAGACAACTTAGAAGGTTGCTATGTTGAGCAAGAACAATTGACAAAACCTACAGCCAATGAAAAGGGTATCTGTAATGACAACGACAAGAAACCAACTTTCTGCAAGAAGCGGATTACAGTTGTAGTAAAAAGGGAGAAATTTCTAGATATAGTTTGTGGTGCCCTTTCT
GAATATCGCTATGTTAGTCCGAATCAAAGATTGGATTTGATTATAGCATGCAGAATACGTGAGCATAAGGAATCAATGACTATTTTGCTTTGTGGAACTAGTGGATGTGGCAAGTCAACATTATCTTCTTTATTGGCTAGTAGACTTGGCATTACAACTGTTGTTTCTACTGACTCAATACGCCACATGATGAGGAGCTT
TGTGGATGAAAAGGAAAACCCTTTATTATGGGCCTCAACATATCATGCTGGTGAGTGTTTAGATCCAGTTGCTGTAGCCGAAGCAAAGGCTAAAAAGAAAGATAAAAAATTTTCAGGGCGACCTCCAAATGGACAATCGATCAGAATAGAGCCTGGGATGTTTTCAAAGACTGATGATCAAGCTGAGTATAATTTCCGAC
ATGAGACTCTGGGAGAAAACCAATTCAAATCTGATAATCTTGAGAAGGAAGGATTTGATGCTAATAGTGGTGCAGACGTAATTGGACGCAAAGCTATGGCTGTTGAGGGGTACAAGGCACAAAGTGAGATGGTGATTGAAAGCCTTGACAGGTTGATCAGTGCATGGGAAGAAAGGAAGGAATCTGTTGTGGTTGAAGGT
GTGCATTTGAGTCTGAACTTTGTGATGGGGCTCATGAAAAAACATCCATCAATTATACCGTTCATGATCTACATTGCAAATGAAGAGAAGCATTTAGAGCGCTTTGCCATTCGTGCAAAATATATGACCTTAGATCCTGCAAAGAACAAGTATGTTAAGTACATTCGTAATATCCGGGCAATCCAGGATTACCTGTGCAA
ACGAGCTGACAAACGTATAGTTCCAAAGGTCAATAATACTAATGTGGATAAAAGTGTGGCCTCTATACATGCTACAATATTTAGCTGTTTACGCAGACGAGAGACAGGTGAACACCTCTATGATCAGGCTACAAATACAGTCAAGGTAGTAGATGAAGAGTATCATAATGTTTGTGCTGCAAATTCACTTAGCTCAAAGG
GTATGTTTAAGCTTATTCAGAGACAAGGCTCTTTTCGGCGTCTGATGGCACTAGTTAATACTGATGGATCTGTTGCAAAGGCATGGCCAGTTGACGTAGTAGATAGTAATGGTAAACCTGTTTCAAACTATGGGAGTGATAGTTGTGTTGGGAGTCCCATGTATGGACCTTTACAGATTGGAAAGGAAGAGCCTGTTAAC
CTTCAGTTTGGTAATTTTGGTATTAGTTCCTGGCCTAATGACACTTCTGGTGCAAGCCATGCCAGTAGCATTGATGGTAATGAAGTAAACAGTCGTTATTCTTCTCTTTCAAACTCACCCAGGCACTCTGATGGACCTGCAAAGGAGCTCACTGAAGAATTGCCAGTACCAAGCAGTGATGAAGAACCTGATGAAGTGCC
TCCTGTTGATTCTGAGGATGAACTCAGTGACTCGAGCGTTAAGCAAGAAGATGAACTAGAAGGTTCTGTTAATGAGGGATCTGCAAGGTCCGATGAAGGATATGAAAATTTGGCTCCTGATGAACAAGGCGGTGACTATTGGTCAGATAATTCAGGTGGTCAACCAACTATAGGTACTTTAGATGAAAATGAGGAAGATT
CAATAATTTTGCCTCTTGACAAAGCGAAGCAACACAGTTTTAGCCATGACGCTTGTTCCTTTAATACGAATCGTACGGGTTTAAAATCGCGTACGTTTGGTAAACGTATTCTTAATGAGACGTCATTACAATCTGAATGCTTCTCGAGGAGTCTCTCTCTGGCATCTACCAGAAAATCAAGATCACTTACTTCACAGCAT
CGCAGTGTCAACATTCGATCCCAAAGTGTCCCTGCTTTTGAAAAGTATACTCAATCAGTAACTAATAAAACGATTTTATAGTAGGTTTCTAGTGGTATATCTTGAAAATAGATAATTAGATCTGTTCATGCACAATAGCTATATCTGCTGCAATCTGTATGTAAACCAGGTGTAGAAATACTCAGGAGTATCTCGAATAA
TAGTAGTGGTTGTCTCTCTGATTTCCAAGGGGTAAAAATCAAATGAATGGTTCTGTAGAGTTGAACAGTTTTGAGAAGTGTATTTACAGCATTTTAGCAGAGGCATTCAATATCCATTGATCTCATGCCTATGGGTTAAATATTAGCCAGCATTGCATGTGAGAATGATAGCTTTAGTGGAGCTCACCATCAAGCTGTAC
TTCCTCTTCATGCCTTATATGTGTTTTGGATGGCATCGTCAGAAATAGTTGGAAAGGAAGCATCATCAGTGGAATAATTCAAGAATTTATTGAATTTTTAGGAGATCTTTTTGTTTTGGAATTTGAGTTGTGTAATCTCAGAGTTCAAATGTAACTCGGGCATCCATGTTCTTGCCGTGCCTGAGGAGGTCTGCACCTCC
TCTCTCTTTAATGCAAATCTTATAT
Intron 3 GTAAGAAATC ... TCTTAAACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 70.64 | 21 | 52 | 49.3 |
| A2 | 63.7 | 26 | 45 | 46.3 |
| A3 | 66.21 | 27 | 56 | 49.8 |
| A4 | 61.92 | 31 | 38 | 63.5 |
| A5 | 78.09 | 5 | 22 | 13.7 |
| A6 | 54.08 | 8 | 6 | 13 |
| A7 | 61.87 | 17 | 33 | 22.3 |
| A8 | 67.37 | 5 | 12 | 8.7 |
| A9 | 72.03 | 16 | 40 | 42.7 |
| A10 | 70.25 | 18 | 48 | 37.2 |
>TRINITY_DN43291_c0_g1_i13 from sample A8 / Example spliced isoformCGGCTATCTTTGTTACCATGCTTGGCCCCCGGCTGGCAAGCGCTAAACCGCCCCCCTTAACTAGGGTTAGTTACAGGAGTCAGCCGAGTCGAATAGCAGGCGCAGCGGGAAATAAATGATATACTGTAAATGCACTCAGCGTGAGATATCGCCTCCATTTTTAGTTATCCAGCGTCTCTGAACAAACATTTGAGGTTGTA
GCAGGTCTTGGCTTTAACTACCAGGTAATGGCAGATGTACATAAACTGTTCTATATCATTGTACTAGATGAAGATTCACAGGGTGAATGGACAGGAGAAGAATCACCTTCTCTGTTTTTCCAAAAATCAAATCATTCTTTTCGGTATACACGTCCAGTTTTACAGAGCATATTGCAGTTAATGGGTTGCAAACAACGCCA
CTCATTTAAGATTACGAAAAAGGTGTTTGAGATAATCAAGGATGAAATTCCTGTCGATCTTGATGGGAATGGAAGTTCATTAATAAATGTCCATCAAAAGTTTTCTGAGGTCAGAAAAGACAACTTAGAAGGTTGCTATGTTGAGCAAGAACAATTGACAAAACCTACAGCCAATGAAAAGGGTATCTGTAATGACAACG
ACAAGAAACCAACTTTCTGCAAGAAGCGGATTACAGTTGTAGTAAAAAGGGAGAAATTTCTAGATATAGTTTGTGGTGCCCTTTCTGAATATCGCTATGTTAGTCCGAATCAAAGATTGGATTTGATTATAGCATGCAGAATACGTGAGCATAAGGAATCAATGACTATTTTGCTTTGTGGAACTAGTGGATGTGGCAAG
TCAACATTATCTTCTTTATTGGCTAGTAGACTTGGCATTACAACTGTTGTTTCTACTGACTCAATACGCCACATGATGAGGAGTTTTGTGGATGAAAAGGAAAACCCTTTATTATGGGCCTCAACATATCATGCTGGTGAGTGTTTAGATCCAGTTGCTGTAGCCGAAGCAAAGGCTAAAAAGAAAGATAAAAAATTTTC
AGGGCGACCTCCAAATGGACAATCGATCAGAATAGAGCCTGGGATGTTTTCAAAGACTGATGATCAAGCTGAGTATAATTTCCGACATGAGACTCTGGGAGAAAACCAATTCAAATCTGATAATCTTGAGAAGGAAGGATTTGATGCTAATAGTGGTGCAGACGTAATTGGACGCAAAGCTATGGCTGTTGAGGGGTACA
AGGCACAAAGTGAGATGGTGATTGAAAGCCTTGACAGGTTGATCAGTGCATGGGAAGAAAGGAAGGAATCTGTTGTGGTTGAAGGTGTGCATTTGAGTCTGAACTTTGTGATGGGGCTCATGAAAAAACATCCATCAATTATACCGTTCATGATCTACATTGCAAATGAAGAGAAGCATTTAGAGCGCTTTGCCATTCGT
GCAAAATATATGACCTTAGATCCTGCAAAGAACAAGTATGTTAAGTACATTCGTAATATCCGGGCAATCCAGGATTACCTGTGCAAACGAGCTGACAAACGTATAGTTCCAAAGGTCAATAATACTAATGTGGATAAAAGTGTGGCCTCTATACATGCTACAATATTTAGCTGTTTACGCAGACGAGAGACAGGTGAACA
CCTCTATGATCAGGCTACAAATACAGTCAAGGTAGTAGATGAAGAGTATCATAATGTTTGTGCTGCAAATTCACTTAGCTCAAAGGGTATGTTTAAGCTTATTCAGAGACAAGGCTCTTTTCGGCGTCTGATGGCACTAGTTAATACTGATGGATCTGTTGCAAAGGCATGGCCAGTTGACGTAGTAGATAGTAATGGTA
AACCTGTTTCAAACTATGGGAGTGATAGTTGTGTTGGGAGTCCCATGTATGGACCTTTACAGATTGGAAAGGAAGAGCCTGTTAACCTTCAGTTTGGTAATTTTGGTATTAGTTCCTGGCCTAATGACACTTCTGGTGCAAGCCATGCCAGTAGCATTGATGGTAATGAAGTAAACAGTCGTTATTCTTCTCTTTCAAAC
TCACCCAGGCACTCTGATGGACCTGCAAAGGAGCTCACTGAAGAATTGCCAGTACCAAGCAGTGATGAAGAACCTGATGAAGTGCCTCCTGTTGATTCTGAGGATGAACTCAGTGACTCGAGCGTTAAGCAAGAAGATGAACTAGAAGGTTCTGTTAATGAGGGATCTGCAAGGTCCGATGAAGGATATGAAAATTTGGC
TCCTGATGAACAAGGCGGTGACTATTGGTCAGATAATTCAGGTGGTCAACCAACTATAGGTACTTTAGATGAAAATGAGGAAGATTCAATAATTTTGCCTCTTGACAAAGCGAAGCAACACAGTTTTAGCCATGACGCTTGTTCCTTTAATACGAATCGTACGGGTTTAAAATCGCGTACGTTTGGTAAACGTATTCTTA
ATGAGACGTCATTACAATCTGAATGCTTCTCGAGGAGTCTCTCTCTGGCATCTACCAGAAAATCAAGATCACTTACTTCACAGCATCGCAGTGTCAACATTCGATCCCAAAGTGTCCCTGCTTTTGAAAAGTATACTCAATCAGTAACTAATAAAACGATTTTATAGTAGGTTTCTAGTGGTATATCTTGAAAATAGATA
ATTAGATCTGTTCATGCACAATAGCTATATCTGCTGCAATCTGTATGTAAACCAGGTGTAGAAATACTCAGGAGTATCTCGAATAATAGTAGTGGTTGTCTCTCTGATTTCCAAGGGGTAAAAATCAAATGAATGGTTCTGTAGAGTTGAACAGTTTTGAGAAGTGTATTTACAGCATTTTAGCAGAGGCATTCAATATC
CATTGATCTCATGCCTATGGGTTAAATATTAGCCAGCATTGCATGTGAGAATGATAGCTTTAGTGGAGCTCACCATCAAGCTGTACTTCCTCTTCATGCCTTATATGTGTTTTGGATGGCATCGTCAGAAATAGTTGGAAAGGAAGCATCATCAGTGGAATAATTCAAGAATTTATTGAATTTTTAGGAGATCTTTTTGT
TTTGGAATTTGAGTTGTGTAATCTCAGAGTTCAAATGTAACTCGGGCATCCATGTTCTTGCCGTGCCTGAGGAGGTCTGCACCTCCTCTCTCTTTAATGCAAATCTTATATCAATACAATTTTTTTTTAATTGATCAGATTGTTAAGTCTCG
>TRINITY_DN43291_c0_g1_i1 from sample A8 / Example unspliced isoform:CGGCTATCTTTGTTACCATGCTTGGCCCCCGGCTGGCAAGCGCTAAACCGCCCCCCTTAACTAGGGTTAGTTACAGGAGTCAGCCGAGTCGAATAGCAGGCGCAGCGGGAAATAAATGATATACTGTAAATGCgtaagaaatcatcggatcttctgagttgacagggcattttttctgaaatttatgcattttgtcgcaa
tttgttaaaatttgagccggaacggtcttaaacagACTCAGCGTGAGATATCGCCTCCATTTTTAGTTATCCAGCGTCTCTGAACAAACATTTGAGGTTGTAGCAGGTCTTGGCTTTAACTACCAGGTAATGGCAGATGTACATAAACTGTTCTATATCATTGTACTAGATGAAGATTCACAGGGTGAATGGACAGGAGA
AGAATCACCTTCTCTGTTTTTCCAAAAATCAAATCATTCTTTTCGGTATACACGTCCAGTTTTACAGAGCATATTGCAGTTAATGGGTTGCAAACAACGCCACTCATTTAAGATTACGAAAAAGGTGTTTGAGATAATCAAGGATGAAATTCCTGTCGATCTTGATGGGAATGGAAGTTCATTAATAAATGTCCATCAAA
AGTTTTCTGAGGTCAGAAAAGACAACTTAGAAGGTTGCTATGTTGAGCAAGAACAATTGACAAAACCTACAGCCAATGAAAAGGGTATCTGTAATGACAACGACAAGAAACCAACTTTCTGCAAGAAGCGGATTACAGTTGTAGTAAAAAGGGAGAAATTTCTAGATATAGTTTGTGGTGCCCTTTCTGAATATCGCTAT
GTTAGTCCGAATCAAAGATTGGATTTGATTATAGCATGCAGGTACTATAACTGCAGCCGTTCAGAGTGGTTTCAATTGCATAAGTTGTTGGATTCCTTTTACTTTATGTTGGAATTTCATTTGAAAAGTAGGAATGCAATGGAAGTAGTTTGATGGAATTCTTGCTCTTTTGAAATTGCTTGTTCAAGAGTGATTTGG
Intron 4 GTAAGAAATC ... AACATTTGAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 57.07 | 39.1 | 52 | 52 |
| A2 | 58.24 | 31.1 | 44.7 | 42 |
| A3 | 58.15 | 33.4 | 55.9 | 37 |
| A4 | 60.19 | 34 | 37.8 | 65 |
| A5 | 42.42 | 22.4 | 22 | 11 |
| A6 | 47.62 | 11 | 6 | 14 |
| A7 | 53.19 | 27.6 | 32.7 | 30 |
| A8 | 51.27 | 9.4 | 11.8 | 8 |
| A9 | 60.36 | 22.6 | 39.9 | 29 |
| A10 | 57.77 | 29.4 | 47.5 | 33 |
>TRINITY_DN122167_c8_g1_i3 from sample A1 / Example spliced isoformCGGCCATCTTTGTTACCATGCTTGGCCCCCGGCTGGCAAGCGCTAAACCGCCTCCGTTAACTAGGGTTAGTTACAGGAGTCAGCCGAGTCGAATAGCAGGCGCAGCGGGAAATAAATGATATACTGTAAATGCGTTGTAGCAGGTCTTGGCTTTAACTACCAGGTAATGGCAGATGTACATAAACTGTTCTATATCATTG
TACTAGATGAAGATTCACAGGGTGAATGGACAGGAGAAGAATCACCTTCTCTGTTTTTCCAAAAATCAAATCATTCTTTTCGGTATACACGTCCAGTTTTACAGAGCATATTGCAGTTAATGGGTTGCAAACAACGCCACTCATTTAAGGTGATCCGTTTCTGCCTTGTTTTCTAGTATTTTGGGGCATCTCTACTGATC
TTTCATGCCATCGAAAGTTGGATTTGTAAACCCTATTTGCATTTTGCACTTGTTGCCAGGAATTAGGGAGGCCTGCA
>TRINITY_DN122167_c8_g1_i1 from sample A1 / Example unspliced isoform:CGGCCATCTTTGTTACCATGCTTGGCCCCCGGCTGGCAAGCGCTAAACCGCCTCCGTTAACTAGGGTTAGTTACAGGAGTCAGCCGAGTCGAATAGCAGGCGCAGCGGGAAATAAATGATATACTGTAAATGCgtaagaaatcatcggatcttctgagttgacagggcattttttctgaaatttatgcattttgtcgcaa
tttgttaaaatttgagccggaacggtcttaaacagactcagcgtgagatatcgcctccatttttagttatccagcgtctctgaacaaacatttgagGTTGTAGCAGGTCTTGGCTTTAACTACCAGGTAATGGCAGATGTACATAAACTGTTCTATATCATTGTACTAGATGAAGATTCACAGGGTGAATGGACAGGAGA
AGAATCACCTTCTCTGTTTTTCCAAAAATCAAATCATTCTTTTCGGTATACACGTCCAGTTTTACAGAGCATATTGCAGTTAATGGGTTGCAAACAACGCCACTCATTTAAGGTAACTACAGCAGCAATAGTTGTTGGTTGTGAATGGCTTAAAGGCTGTCGCATATATAGTTTGCAAGGGGGATGAACAGTGTCCAACA
TTCTGCTCCTCTATGATGATTTTAATGTGCATAAGT