sp|A3BF39|HMA2_ORYSJ ----> Cadmium/zinc-transporting ATPase HMA2
Intron 1 GTTATATTTG ... TTGACCACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 18.18 | 9 | 2 | 2 |
| A2 | 18.84 | 28 | 4 | 9 |
| A3 | 50 | 2 | 2 | 2 |
| A4 | 30.43 | 8 | 2 | 5 |
| A5 | 10 | 9 | 1 | 1 |
| A6 | 0 | 2 | 0 | 0 |
| A7 | 100 | 0 | 0 | 1 |
| A8 | -1 | 0 | 0 | 0 |
| A9 | 12.5 | 7 | 0 | 2 |
| A10 | 33.33 | 1 | 0 | 1 |
>TRINITY_DN95234_c0_g1_i3 from sample A4 / Example spliced isoformATGGCCAATCCCTTATATTGTAGCTTCTGGTATTTTGCTTCTCATATCCTTTTTAAAGTTTTGGTTCAGGCCTCTACAATGGGTGGCTTTAGGAGCCGTAGCTGCAGGCCTCCCCCCAATATTACTGAAGAGCATAGTGGCTCTCCGCAGTTTAATATTGGACATCAACACGCTTATGCTTATTGCAGTTGCTGGCAGCA
TTGGATTACGAGATTACTTGGAGGCAGGCACCATTGTCTTTCTGTTTACCTTGGCAGAATGGCTAGAATCTAGATCAAGTGACAAGGCTCGGGCAGCCATAGCATCTGTGATGAATCTGGCTCCCCAGACGGCTATTATTGAAGGGAGTGGTGCCAGAGTCCCTGTTGAGGATGTGGAGATAAACTCCCTTCTCGCTGTA
AAAGCTGGAGATATAATACCAATAGATGGTATTATCATGTCGGGAAGTAGCTCCGTAGATGAAAGCAGTTTGACTGGGGAGTCCTTGCCTGTCGAGAAAAATGTTGGGGCAAATGTCTGGGCTGGTACTATGAATCTAACAGGTTACATGACTGTGAAAACAGTAGCATTGGCATCAGAATCTGCAGTGGCAAGAATGGT
TAAGCTTGTTGAAGAAGCACAGGGCCAACGGTCCCGCACAGATCAGTTCATACAACAGTTTGCAAAGTGCTACACACCAGTCGTTGTGTTGGGAGCTGCAGGAATAGCAGCGGAAGCGTGCATTAATCATTCAAGGGAACACCATTGGCTTTACTTGGCCTTAGTTCTTCTGGTCATTGCTTGTCCGTGCGCATTGGTTA
TCTCCACACCAATTGCTACAACTTGTGCAGTGGCACAAGCTGCCAGAATGGGCCTCCTTATCAAAGGTGGAAACTACATAGAAGCACTGGGAAGGCTAAAGGCAATAGCGTTTGATAAAACTGGAACCCTAACACAGGGAGATTTCTGTGTTGTAGATATACAAGTTATTGAAGAAAGCACAGATATCCCTAAGATTCTG
CACTGGATGTCTAGTCTTGAAATACAATCAAGCCATCCAATGTCATCTGCTATTATAGCATACTGTCGCCAGCGAGGACTAATGGAAGCATCAGCAGAGGTGACAGAGTTCCAGGCGCTCCATGGTGAAGGAATCTATGGTGTCATTGATGACCATAAAATTCATATTGGCAATGCTCGATTAGCAAGTCGGCTAGGTTG
GATTCAAGATTCATCGAATACATGGAACAGCCAAGGACCAACGGTCGGGTATGTGGGAGTAGACGAGAAGCTTGCTTTAGTCTTTAGTGTTGCAGATCAAATCAGACCAGAAGCAGCTGAAGCTATGAGGGATTTGAAAGTATTTCGTCTAACACTTCTGGAGTTTACTTTATGAATATATTCTGTTGGTATTGTGTGG
>TRINITY_DN95234_c0_g1_i4 from sample A4 / Example unspliced isoform:ATGGCCAATCCCTTATATTGTAGCTTCTGGTATTTTGCTTCTCATATCCTTTTTAAAGTTTTGGTTCAGGCCTCTACAATGGGTGGCTTTAGGAGCCGTAGCTGCAGGCCTCCCCCCAATATTACTGAAGAGCATAGTGGCTCTCCGCAGTTTAATATTGGACATCAACACGCTTATGCTTATTGCAGGTGGAATCCCAT
CTCTATATTAAGCCTTTGAATCCTCTAATTCAGATAATCAGAGTCTGAAACATTAGAATGTATAGTTCGTGATTCTAATTCTAAGGCCCATATGATTTTATGAATGAAATAGTTGCTGGCAGCATTGGATTACGAGATTACTTGGAGGCAGGCACCATTGTCTTTCTGTTTACCTTGGCAGAATGGCTAGAATCTAGATC
AAGTGACAAGgttatatttgatttaattttattcattcatcaatacatatttttgaaaagcttcatagtcttgagacatatatctaattcgccttgaccacagGCTCGGGCAGCCATAGCATCTGTGATGAATCTGGCTCCCCAGACGGCTATTATTGAAGGGAGTGGTGCCAGAGTCCCTGTTGAGGATGTGGAGATAA
ACTCCCTTCTCGCTGTAAAAGCTGGAGATATAATACCAATAGATGGTATTATCATGTCGGGAAGTAGCTCCGTAGATGAAAGCAGTTTGACTGGGGAGTCCTTGCCTGTCGAGAAAAATGTTGGGGCAAATGTCTGGGCTGGTACTATGAATCTAACAGGTTACATGACTGTGAAAACAGTAGCATTGGCATCAGAATCT
GCAGTGGCAAGAATGGTTAAGCTTGTTGAAGAAGCACAGGGCCAACGGTCCCGCACAGATCAGTTCATACAACAGTTTGCAAAGTGCTACACACCAGTCGTTGTGTTGGGAGCTGCAGGAATAGCAGCGGAAGCGTGCATTAATCATTCAAGGGAACACCATTGGCTTTACTTGGCCTTAGTTCTTCTGGTCATTGCTTG
TCCGTGCGCATTGGTTATCTCCACACCAATTGCTACAACTTGTGCAGTGGCACAAGCTGCCAGAATGGGCCTCCTTATCAAAGGTGGAAACTACATAGAAGCACTGGGAAGGCTAAAGGCAATAGCGTTTGATAAAACTGGAACCCTAACACAGGGAGATTTCTGTGTTGTAGATATACAAGTTATTGAAGAAAGCACAG
ATATCCCTAAGATTCTGCACTGGATGTCTAGTCTTGAAATACAATCAAGCCATCCAATGTCATCTGCTATTATAGCATACTGTCGCCAGCGAGGACTAATGGAAGCATCAGCAGAGGTGACAGAGTTCCAGGCGCTCCATGGTGAAGGAATCTATGGTGTCATTGATGACCATAAAATTCATATTGGCAATGCTCGATTA
GCAAGTCGGCTAGGTTGGATTCAAGATTCATCGAATACATGGAACAGCCAAGGACCAACGGTCGGGTATGTGGGAGTAGACGAGAAGCTTGCTTTAGTCTTTAGTGTTGCAGATCAAATCAGACCAGAAGCAGCTGAAGCTATGAGGGATTTGAAAAAATTAGGAATCCAACTGACCATGCTTACCGGAGACAGCTCTAC
TGCAGCTGCAATTATTGAAAAAGAGATAGGAGAGATTGCAGTGCATTCTCAGTTACTACCAGAAGACAAAGTGAGGATAATTGGAGAGCTAAAGCAGATGGGTATGACTGCCATGGTAGGAGATGGAATTAACGATGCCCCGGCCTTAGCTGCAGCAGACATTGGAATATCTATGGGGGTAGCAGGTTCTGCAGTGGC
Intron 2 GTGGAATCCC ... AATGAAATAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 22.22 | 7 | 2 | 1 |
| A2 | 5.88 | 16 | 1 | 0 |
| A3 | 33.33 | 2 | 1 | 2 |
| A4 | 33.33 | 12 | 6 | 2 |
| A5 | 35.71 | 9 | 5 | 2 |
| A6 | 14.29 | 6 | 1 | 0 |
| A7 | 66.67 | 1 | 2 | 1 |
| A8 | 85.71 | 1 | 6 | 1 |
| A9 | 22.22 | 7 | 2 | 0 |
| A10 | 40 | 6 | 4 | 0 |
>TRINITY_DN95234_c0_g1_i3 from sample A4 / Example spliced isoformATGGCCAATCCCTTATATTGTAGCTTCTGGTATTTTGCTTCTCATATCCTTTTTAAAGTTTTGGTTCAGGCCTCTACAATGGGTGGCTTTAGGAGCCGTAGCTGCAGGCCTCCCCCCAATATTACTGAAGAGCATAGTGGCTCTCCGCAGTTTAATATTGGACATCAACACGCTTATGCTTATTGCAGTTGCTGGCAGCA
TTGGATTACGAGATTACTTGGAGGCAGGCACCATTGTCTTTCTGTTTACCTTGGCAGAATGGCTAGAATCTAGATCAAGTGACAAGGCTCGGGCAGCCATAGCATCTGTGATGAATCTGGCTCCCCAGACGGCTATTATTGAAGGGAGTGGTGCCAGAGTCCCTGTTGAGGATGTGGAGATAAACTCCCTTCTCGCTGTA
AAAGCTGGAGATATAATACCAATAGATGGTATTATCATGTCGGGAAGTAGCTCCGTAGATGAAAGCAGTTTGACTGGGGAGTCCTTGCCTGTCGAGAAAAATGTTGGGGCAAATGTCTGGGCTGGTACTATGAATCTAACAGGTTACATGACTGTGAAAACAGTAGCATTGGCATCAGAATCTGCAGTGGCAAGAATGGT
TAAGCTTGTTGAAGAAGCACAGGGCCAACGGTCCCGCACAGATCAGTTCATACAACAGTTTGCAAAGTGCTACACACCAGTCGTTGTGTTGGGAGCTGCAGGAATAGCAGCGGAAGCGTGCATTAATCATTCAAGGGAACACCATTGGCTTTACTTGGCCTTAGTTCTTCTGGTCATTGCTTGTCCGTGCGCATTGGTTA
TCTCCACACCAATTGCTACAACTTGTGCAGTGGCACAAGCTGCCAGAATGGGCCTCCTTATCAAAGGTGGAAACTACATAGAAGCACTGGGAAGGCTAAAGGCAATAGCGTTTGATAAAACTGGAACCCTAACACAGGGAGATTTCTGTGTTGTAGATATACAAGTTATTGAAGAAAGCACAGATATCCCTAAGATTCTG
CACTGGATGTCTAGTCTTGAAATACAATCAAGCCATCCAATGTCATCTGCTATTATAGCATACTGTCGCCAGCGAGGACTAATGGAAGCATCAGCAGAGGTGACAGAGTTCCAGGCGCTCCATGGTGAAGGAATCTATGGTGTCATTGATGACCATAAAATTCATATTGGCAATGCTCGATTAGCAAGTCGGCTAGGTTG
GATTCAAGATTCATCGAATACATGGAACAGCCAAGGACCAACGGTCGGGTATGTGGGAGTAGACGAGAAGCTTGCTTTAGTCTTTAGTGTTGCAGATCAAATCAGACCAGAAGCAGCTGAAGCTATGAGGGATTTGAAAGTATTTCGTCTAACACTTCTGGAGTTTACTTTATGAATATATTCTGTTGGTATTGTGTGG
>TRINITY_DN95234_c0_g1_i4 from sample A4 / Example unspliced isoform:ATGGCCAATCCCTTATATTGTAGCTTCTGGTATTTTGCTTCTCATATCCTTTTTAAAGTTTTGGTTCAGGCCTCTACAATGGGTGGCTTTAGGAGCCGTAGCTGCAGGCCTCCCCCCAATATTACTGAAGAGCATAGTGGCTCTCCGCAGTTTAATATTGGACATCAACACGCTTATGCTTATTGCAGgtggaatcccat
ctctatattaagcctttgaatcctctaattcagataatcagagtctgaaacattagaatgtatagttcgtgattctaattctaaggcccatatgattttatgaatgaaatagTTGCTGGCAGCATTGGATTACGAGATTACTTGGAGGCAGGCACCATTGTCTTTCTGTTTACCTTGGCAGAATGGCTAGAATCTAGATC
AAGTGACAAGGTTATATTTGATTTAATTTTATTCATTCATCAATACATATTTTTGAAAAGCTTCATAGTCTTGAGACATATATCTAATTCGCCTTGACCACAGGCTCGGGCAGCCATAGCATCTGTGATGAATCTGGCTCCCCAGACGGCTATTATTGAAGGGAGTGGTGCCAGAGTCCCTGTTGAGGATGTGGAGATAA
ACTCCCTTCTCGCTGTAAAAGCTGGAGATATAATACCAATAGATGGTATTATCATGTCGGGAAGTAGCTCCGTAGATGAAAGCAGTTTGACTGGGGAGTCCTTGCCTGTCGAGAAAAATGTTGGGGCAAATGTCTGGGCTGGTACTATGAATCTAACAGGTTACATGACTGTGAAAACAGTAGCATTGGCATCAGAATCT
GCAGTGGCAAGAATGGTTAAGCTTGTTGAAGAAGCACAGGGCCAACGGTCCCGCACAGATCAGTTCATACAACAGTTTGCAAAGTGCTACACACCAGTCGTTGTGTTGGGAGCTGCAGGAATAGCAGCGGAAGCGTGCATTAATCATTCAAGGGAACACCATTGGCTTTACTTGGCCTTAGTTCTTCTGGTCATTGCTTG
TCCGTGCGCATTGGTTATCTCCACACCAATTGCTACAACTTGTGCAGTGGCACAAGCTGCCAGAATGGGCCTCCTTATCAAAGGTGGAAACTACATAGAAGCACTGGGAAGGCTAAAGGCAATAGCGTTTGATAAAACTGGAACCCTAACACAGGGAGATTTCTGTGTTGTAGATATACAAGTTATTGAAGAAAGCACAG
ATATCCCTAAGATTCTGCACTGGATGTCTAGTCTTGAAATACAATCAAGCCATCCAATGTCATCTGCTATTATAGCATACTGTCGCCAGCGAGGACTAATGGAAGCATCAGCAGAGGTGACAGAGTTCCAGGCGCTCCATGGTGAAGGAATCTATGGTGTCATTGATGACCATAAAATTCATATTGGCAATGCTCGATTA
GCAAGTCGGCTAGGTTGGATTCAAGATTCATCGAATACATGGAACAGCCAAGGACCAACGGTCGGGTATGTGGGAGTAGACGAGAAGCTTGCTTTAGTCTTTAGTGTTGCAGATCAAATCAGACCAGAAGCAGCTGAAGCTATGAGGGATTTGAAAAAATTAGGAATCCAACTGACCATGCTTACCGGAGACAGCTCTAC
TGCAGCTGCAATTATTGAAAAAGAGATAGGAGAGATTGCAGTGCATTCTCAGTTACTACCAGAAGACAAAGTGAGGATAATTGGAGAGCTAAAGCAGATGGGTATGACTGCCATGGTAGGAGATGGAATTAACGATGCCCCGGCCTTAGCTGCAGCAGACATTGGAATATCTATGGGGGTAGCAGGTTCTGCAGTGGC
Intron 3 GTATTTGTTA ... TGGGCTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 29.41 | 6 | 1 | 4 |
| A2 | 16.67 | 10 | 0 | 4 |
| A3 | 52.38 | 5 | 7 | 4 |
| A4 | 24.44 | 17 | 5 | 6 |
| A5 | 45.45 | 6 | 6 | 4 |
| A6 | 40 | 9 | 3 | 9 |
| A7 | 21.43 | 11 | 0 | 6 |
| A8 | 44 | 7 | 3 | 8 |
| A9 | 25 | 6 | 2 | 2 |
| A10 | 25 | 3 | 0 | 2 |
>TRINITY_DN95234_c0_g1_i4 from sample A4 / Example spliced isoformATGGCCAATCCCTTATATTGTAGCTTCTGGTATTTTGCTTCTCATATCCTTTTTAAAGTTTTGGTTCAGGCCTCTACAATGGGTGGCTTTAGGAGCCGTAGCTGCAGGCCTCCCCCCAATATTACTGAAGAGCATAGTGGCTCTCCGCAGTTTAATATTGGACATCAACACGCTTATGCTTATTGCAGGTGGAATCCCAT
CTCTATATTAAGCCTTTGAATCCTCTAATTCAGATAATCAGAGTCTGAAACATTAGAATGTATAGTTCGTGATTCTAATTCTAAGGCCCATATGATTTTATGAATGAAATAGTTGCTGGCAGCATTGGATTACGAGATTACTTGGAGGCAGGCACCATTGTCTTTCTGTTTACCTTGGCAGAATGGCTAGAATCTAGATC
AAGTGACAAGGTTATATTTGATTTAATTTTATTCATTCATCAATACATATTTTTGAAAAGCTTCATAGTCTTGAGACATATATCTAATTCGCCTTGACCACAGGCTCGGGCAGCCATAGCATCTGTGATGAATCTGGCTCCCCAGACGGCTATTATTGAAGGGAGTGGTGCCAGAGTCCCTGTTGAGGATGTGGAGATAA
ACTCCCTTCTCGCTGTAAAAGCTGGAGATATAATACCAATAGATGGTATTATCATGTCGGGAAGTAGCTCCGTAGATGAAAGCAGTTTGACTGGGGAGTCCTTGCCTGTCGAGAAAAATGTTGGGGCAAATGTCTGGGCTGGTACTATGAATCTAACAGGTTACATGACTGTGAAAACAGTAGCATTGGCATCAGAATCT
GCAGTGGCAAGAATGGTTAAGCTTGTTGAAGAAGCACAGGGCCAACGGTCCCGCACAGATCAGTTCATACAACAGTTTGCAAAGTGCTACACACCAGTCGTTGTGTTGGGAGCTGCAGGAATAGCAGCGGAAGCGTGCATTAATCATTCAAGGGAACACCATTGGCTTTACTTGGCCTTAGTTCTTCTGGTCATTGCTTG
TCCGTGCGCATTGGTTATCTCCACACCAATTGCTACAACTTGTGCAGTGGCACAAGCTGCCAGAATGGGCCTCCTTATCAAAGGTGGAAACTACATAGAAGCACTGGGAAGGCTAAAGGCAATAGCGTTTGATAAAACTGGAACCCTAACACAGGGAGATTTCTGTGTTGTAGATATACAAGTTATTGAAGAAAGCACAG
ATATCCCTAAGATTCTGCACTGGATGTCTAGTCTTGAAATACAATCAAGCCATCCAATGTCATCTGCTATTATAGCATACTGTCGCCAGCGAGGACTAATGGAAGCATCAGCAGAGGTGACAGAGTTCCAGGCGCTCCATGGTGAAGGAATCTATGGTGTCATTGATGACCATAAAATTCATATTGGCAATGCTCGATTA
GCAAGTCGGCTAGGTTGGATTCAAGATTCATCGAATACATGGAACAGCCAAGGACCAACGGTCGGGTATGTGGGAGTAGACGAGAAGCTTGCTTTAGTCTTTAGTGTTGCAGATCAAATCAGACCAGAAGCAGCTGAAGCTATGAGGGATTTGAAAAAATTAGGAATCCAACTGACCATGCTTACCGGAGACAGCTCTAC
TGCAGCTGCAATTATTGAAAAAGAGATAGGAGAGATTGCAGTGCATTCTCAGTTACTACCAGAAGACAAAGTGAGGATAATTGGAGAGCTAAAGCAGATGGGTATGACTGCCATGGTAGGAGATGGAATTAACGATGCCCCGGCCTTAGCTGCAGCAGACATTGGAATATCTATGGGGGTAGCAGGTTCTGCAGTGGC
>TRINITY_DN95234_c0_g1_i5 from sample A4 / Example unspliced isoform:ATGGCCAATCCCTTATATTGTAGCTTCTGGTATTTTGCTTCTCATATCCTTTTTAAAGTTTTGGTTCAGGCCTCTACAATGGGTGGCTTTAGGAGCCGTAGCTGCAGGCCTCCCCCCAATATTACTGAAGAGCATAGTGGCTCTCCGCAGTTTAATATTGGACATCAACACGCTTATGCTTATTGCAGTTGCTGGCAGCA
TTGGATTACGAGATTACTTGGAGGCAGGCACCATTGTCTTTCTGTTTACCTTGGCAGAATGGCTAGAATCTAGATCAAGTGACAAGGCTCGGGCAGCCATAGCATCTGTGATGAATCTGGCTCCCCAGACGGCTATTATTGAAGGGAGTGGTGCCAGAGTCCCTGTTGAGGATGTGGAGATAAACTCCCTTCTCGCTGTA
AAAGCTGGAGATATAATACCAATAGATGGTATTATCATGTCGGGAAGTAGCTCCGTAGATGAAAGCAGTTTGACTGGGGAGTCCTTGCCTGTCGAGAAAAATGTTGGGGCAAATGTCTGGGCTGGTACTATGAATCTAACAGGTTACATGACTGTGAAAACAGTAGCATTGGCATCAGAATCTGCAGTGGCAAGAATGGT
TAAGCTTGTTGAAGAAGCACAGGGCCAACGGTCCCGCACAGATCAGTTCATACAACAGTTTGCAAAGTGCTACACACCAGTCGTTGTGTTGGGAGCTGCAGGAATAGCAGCGGAAGCGTGCATTAATCATTCAAGGGAACACCATTGGCTTTACTTGGCCTTAGTTCTTCTGGTCATTGCTTGTCCGTGCGCATTGGTTA
TCTCCACACCAATTGCTACAACTTGTGCAGTGGCACAAGCTGCCAGAATGGGCCTCCTTATCAAAGGTGGAAACTACATAGAAGCACTGGGAAGGCTAAAGGCAATAGCGTTTGATAAAACTGGAACCCTAACACAGGGAGATTTCTGTGTTGTAGATATACAAGTTATTGAAGAAAGCACAGATATCCCTAAGATTCTG
CACTGGATGTCTAGTCTTGAAATACAATCAAGCCATCCAATGTCATCTGCTATTATAGCATACTGTCGCCAGCGAGGACTAATGGAAGCATCAGCAGAGGTGACAGAGTTCCAGGCGCTCCATGGTGAAGGAATCTATGGTGTCATTGATGACCATAAAATTCATATTGGCAATGCTCGATTAGCAAGTCGGCTAGGTTG
GATTCAAGgtatttgttaatggtaacctaaattatgacatactggtttatttgtgtcattcattccaacgaattctgggctgcagATTCATCGAATACATGGAACAGCCAAGGACCAACGGTCGGGTATGTGGGAGTAGACGAGAAGCTTGCTTTAGTCTTTAGTGTTGCAGATCAAATCAGACCAGAAGCAGCTGAAGC
TATGAGGGATTTGAAAGTATTTCGTCTAACACTTCTGGAGTTTACTTTATGAATATATTCTGTTGGTATTGTGTGG