sp|O65049|TRXH_PICMA ----> Thioredoxin H-type

Intron 1 GTGAGTTCTG ... TTTTTTTTAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	57.14	9	1	12
A2	52.63	9	0	10
A3	60.87	9	4	14
A4	53.57	13	4	15
A5	52.38	10	0	11
A6	59.35	100	14	146
A7	52.29	104	10	114
A8	55.3	59	9	73
A9	58.96	71	14	102
A10	57.52	48	9	65

>TRINITY_DN42355_c0_g1_i5 from sample A9 / Example spliced isoform

CAAAGACACCGACATAAGAATAACAACATCAGGTGTGAACAAGACAGGATTCAAACTGGATACAGGTGTGAAAAGATAGTGATTGACCAGATGTACGCTGATCGAGGCAGGTATGACAAACACACCGACATAAGTTATAAGAATAACAACATCAGGTGTGTGAACAAAATTTGAAACAAACTAGTCGGTCAAATTTCTTG
TCCGAACTTGTACAGAGCCTTTGTTCGATTGCAATTCAAACACCCCCATACATCATCTGTTTTTGGAGACGGGTTTTCGAATAGCTTATCAATTCGAGTAACAGGTCATCGATTACGTCATTTATTCGAATAACTTTGAATCTTCTGAGAAGACGAAAAGAAGAGAAGAGATGGCGGAGGGAAACGTGTTTGCATGTCAC
TCTACAGAGGCCTGGCGCTCCAAGCTGCAGGAGGCTATCGATACTAAACGTCTGGTGGTGGTAGATTTCACTGCGACCTGGTGCGGACCTTGTCGAGTTGTGAGTCCAGTGTTTGTTGAGCTGTCAAAGAAATTCCCAGAACTTTTTTTCCTGAAGGTCGATGTGGACGAATTGGGGGATGTAGCCCAAGAGTGGGATGT
GGAGGCCATGCCTACATTTATCTTTATCAAGGATGGAAAGGCTGTGGATAAGGTTGTTGGTGCAAAGAAAGATGAACTTGAAAGAAAAGTTGCGGCCCTGGCTACACAAGCAGTCCTTGTTACTCCGGCCTAGGCACTGTTTTGATATGCTATATGACTACACAAGCAGTCCTTGTTACTCAGGCCTAGGCACTGTTTTG
ATATGCTATATGTTAATATTTTATGGATGTGGACCTGCTGCAATGTTCAATTTGGGCAGAAAATATTATATACTGTCCTGGTCTTTATTATCTATTTTACGAGCTTGCACTCGTATTAACTTATTCGGTTACAGTTAATAAAAGGTTTGGTACCTTGAAGCACAGATCTTATTTTTTGTGTGCTGTTAAATGCGATGAAA
TATAAGGTTTGTAGATGGTTTT

>TRINITY_DN42355_c0_g1_i6 from sample A9 / Example unspliced isoform:

CAAAGACACCGACATAAGAATAACAACATCAGGTGTGAACAAGACAGGATTCAAACTGGATACAGGTGTGAAAAGATAGTGATTGACCAGATGTACGCTGATCGAGGCAGGTATGACAAACACACCGACATAAGTTATAAGAATAACAACATCAGGTGTGTGAACAAAATTTGAAACAAACTAGTCGGTCAAATTTCTTG
TCCGAACTTGTACAGAGCCTTTGTTCGATTGCAATTCAAACACCCCCATACATCATCTGTTTTTGGAGACGGGTTTTCGAATAGCTTATCAATTCGAGTAACAGGTCATCGATTACGTCATTTATTCGAATAACTTTGAATCTTCTGgtgagttctggattctgtttgttcatagaagtcaatgagttgggctataaatt
cctaccgaataatcgaaataacacacaagaagcactaaagatctgacacgcgcagtgttgatcgaaagaacacacacttagcattaaagatctgagacgcccggagttcaattttttttagAGAAGACGAAAAGAAGAGAAGAGATGGCGGAGGGAAACGTGTTTGCATGTCACTCTACAGAGGCCTGGCGCTCCAAGCT
GCAGGAGGCTATCGATACTAAACGTCTGGTGGTGGTAGATTTCACTGCGACCTGGTGCGGACCTTGTCGAGTTGTGAGTCCAGTGTTTGTTGAGCTGTCAAAGAAATTCCCAGAACTTTTTTTCCTGAAGGTCGATGTGGACGAATTGGGGGATGTAGCCCAAGAGTGGGATGTGGAGGCCATGCCTACATTTATCTTTA
TCAAGGATGGAAAGGCTGTGGATAAGGTTGTTGGTGCAAAGAAAGATGAACTTGAAAGAAAAGTTGCGGCCCTGGCTACACAAGCAGTCCTTGTTACTCCGGCCTAGGCACTGTTTTGATATGCTATATGACTACACAAGCAGTCCTTGTTACTCAGGCCTAGGCACTGTTTTGATATGCTATATGTTAATATTTTATGG
ATGTGGACCTGCTGCAATGTTCAATTTGGGCAGAAAATATTATATACTGTCCTGGTCTTTATTATCTATTTTACGAGCTTGCACTCGTATTAACTTATTCGGTTACAGTTAATAAAAGGTTTGGTACCTTGAAGCACAGATCTTATTTTTTGTGTGCTGTTAAATGCGATGAAATATAAGGTTTGTAGATGGTTTT

Intron 2 GTGAGTTCTG ... ACACGCGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	46.66	2.4	1	2
A2	25.34	5.6	0	1
A3	65.71	2.4	4	4
A4	34.62	8	4	4
A5	0	3.2	0	0
A6	46.26	19.2	14	17
A7	35.6	15.2	10	6
A8	51.16	6.8	9	4
A9	55.66	12.4	14	16
A10	60.48	6.8	9	11

>TRINITY_DN42345_c0_g2_i7 from sample A6 / Example spliced isoform

GCCGGGAAACAAACTAGTCGGTCAAATTTCTTGTCCGAACTTGTACAGAGCCTTTGTTCGATTGCAATTCAAACACCCCCATACATCATCTGTTTTTGGAGACGGGTTTTCGAATAGCTTATCAATTCGAGTAACAGGTCATCGATTACGTCATTTATTCGAATAACTTTGAATCTTCTGTGTTGATCGAAAGAACACAC
ACTTAGCATTAAAGATCTGAGACGCCCGGAGTTCAATTTTTTTTAGAGAAGACGAAAAGAAGAGAAGAGATGGCGGAGGGAAACGTGTTTGCATGTCACTCTACAGAGGCATGGCGCTCCAAGCTGCAGGAGGCTATCGATACTAAACGTCTGGTGGTGGTAGATTTCACTGCGACCTGGTGCGGACCTTGTCGAGTTGT
GAGTCCAGTGTTTGTTGAGCTGTCAAAGAAATTCCCAGAAATATTTTTCCTGAAGGTCGATGTGGACGAATTGAGGGATGTAGCTCAAGAGTGGGATGTGGAGGCCATGCCTACATTTATCTTTATCAAGGATGGAAAGGCTGTGGATAAGGTTGTGGGTGCAAAGAAAGATGAACTTGAAAGAAAAGTGGCAGCCCTTG
CTACACAAGCAGTACTTGTTGCTCAAACCTAGGCGCTGTTTTAATATGATATATGCTAGTATTTTCTGGATGTGGACATACTGCAATGTGCAAGTTTAGCAGAAAATATCATACTGTCTTCGTCTTTAGTTATCTATTGTACCTATTGTTATGAGCTTCTTGCACTCGTATTAACCTATTCTGTTGCAGTTAATAAAAGT
TTTGGTACCTTGAAGCATCA

>TRINITY_DN42345_c0_g2_i9 from sample A6 / Example unspliced isoform:

GCCGGGAAACAAACTAGTCGGTCAAATTTCTTGTCCGAACTTGTACAGAGCCTTTGTTCGATTGCAATTCAAACACCCCCATACATCATCTGTTTTTGGAGACGGGTTTTCGAATAGCTTATCAATTCGAGTAACAGGTCATCGATTACGTCATTTATTCGAATAACTTTGAATCTTCTGgtgagttctggattctgttt
gttcatagaagtcaatgagttgggctataaattcctaccgaataatcgaaataacacacaagaagcactaaagatctgacacgcgcagTGTTGATCGAAAGAACACACACTTAGCATTAAAGATCTGAGACGCCCGGAGTTCAATTTTTTTTAGAGAAGACGAAAAGAAGAGAAGAGATGGCGGAGGGAAACGTGTTTGC
ATGTCACTCTACAGAGGCATGGCGCTCCAAGCTGCAGGAGGCTATCGATACTAAACGTCTGGTGGTGGTAGATTTCACTGCGACCTGGTGCGGACCTTGTCGAGTTGTGAGTCCAGTGTTTGTTGAGCTGTCAAAGAAATTCCCAGAAATATTTTTCCTGAAGGTCGATGTGGACGAATTGAGGGATGTAGCTCAAGAGT
GGGATGTGGAGGCCATGCCTACATTTATCTTTATCAAGGATGGAAAGGCTGTGGATAAGGTTGTGGGTGCAAAGAAAGATGAACTTGAAAGAAAAGTGGCAGCCCTTGCTACACAAGCAGTACTTGTTGCTCAAACCTAGGCGCTGTTTTAATATGATATATGCTAGTATTTTCTGGATGTGGACATACTGCAATGTGCA
AGTTTAGCAGAAAATATCATACTGTCTTCGTCTTTAGTTATCTATTGTACCTATTGTTATGAGCTTCTTGCACTCGTATTAACCTATTCTGTTGCAGTTAATAAAAGTTTTGGTACCTTGAAGCATCA

Intron 3 GTAATCGATT ... AGACACACAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	53.31	22.8	21	31
A2	57.27	19.8	25	28
A3	62.99	30	71.1	31
A4	50.6	29.8	21	40
A5	75	7	24	18
A6	54.3	236.6	315.8	246.3
A7	55.17	196.9	275.7	209
A8	52.25	130.7	147	139
A9	50.62	232	261.9	213.8
A10	52.96	165.2	216	156

>TRINITY_DN117510_c0_g1_i1 from sample A1 / Example spliced isoform

AGTCGGTCAAATTTCTTGTCCGAACTTGTACAGAGCCTTTGTTCAATTGCAATTCAAGCACCCCCGGGCCCCGATACTTCATCTGTTTGTTGGAGATGGGTTATCGAATAGGTTATCAATTCGAGGAACAGAGTTGATCGAGATAACATACGCGAAGCATTAAAGATCTGAGAGCGCAGAGTTGATCTTTTTTAGAAGAG
GAAGAGAAGAAATGGCGGAGGGAAATGTGTTTGCGTGTCACTCTACAGAGGCCTGGCGCTCCAAGTTGCAGGAGGCTATCGATACTAAACGTCTGGTGGTGGTAGATTTCACTGCGACCTGGTGCGGACCTTGTCGAGTTGTGAGTCCAGTGTTTGTTGAGCTGTCAAAGAAATTCCCAGAAATATTTTTCCTGAAGGTC
GATGTGGACGAATTGAGGGATGTAGCTCAAGAGTGGGATGTGGAGGCCATGCCTACATTTATCTTTATCAAGGATGGAAAGGCTGTGGATAAGGTTGTGGGTGCAAAGAAAGATGAACTTGAAAGAAAAGTGGCAGCCCTTGCTACACAAGCAGTACTTGTTGCTCAAACCTAGGCGCTGTTTTAATATGATATATGCTA
GTATTTTCTGGATGTGGACATACTGCAATGTGCAAGTTTAGCAGAAAATATCATACTGTCTTCGTCTTTAGTTATCTATTGTACCTATTGTTATGAGCTTCTTGCACTCGTATTAACCTATTCTGTTGCAGTTAATAAAAGTTTTGGTACCTTGAAGCATAAAAAAAAAC

>TRINITY_DN117510_c0_g1_i6 from sample A1 / Example unspliced isoform:

AGTCGGTCAAATTTCTTGTCCGAACTTGTACAGAGCCTTTGTTCAATTGCAATTCAAGCACCCCCGGGCCCCGATACTTCATCTGTTTGTTGGAGATGGGTTATCGAATAGGTTATCAATTCGAGGAACAGgtaatcgattacgtcatttattcgaacaacttggcacctttcagtgacttctagataaatttggcttct
ggattctgtttgttcatagaagtcgatgagttgggctataaattccgaccgaatgatcgaaataacacactaagcattaaagatctgagacacacagAGTTGATCGAGATAACATACGCGAAGCATTAAAGATCTGAGAGCGCAGAGTTGATCTTTTTTAGAAGAGGAAGAGAAGAAATGGCGGAGGGAAATGTGTTTGC
GTGTCACTCTACAGAGGCCTGGCGCTCCAAGTTGCAGGAGGCTATCGATACTAAACGTCTGGTGGTGGTAGATTTCACTGCGACCTGGTGCGGACCTTGTCGAGTTGTGAGTCCAGTGTTTGTTGAGCTGTCAAAGAAATTCCCAGAAATATTTTTCCTGAAGGTCGATGTGGACGAATTGAGGGATGTAGCTCAAGAGT
GGGATGTGGAGGCCATGCCTACATTTATCTTTATCAAGGATGGAAAGGCTGTGGATAAGGTTGTGGGTGCAAAGAAAGATGAACTTGAAAGAAAAGTGGCAGCCCTTGCTACACAAGCAGTACTTGTTGCTCAAACCTAGGCGCTGTTTTAATATGATATATGCTAGTATTTTCTGGATGTGGACATACTGCAATGTGCA
AGTTTAGCAGAAAATATCATACTGTCTTCGTCTTTAGTTATCTATTGTACCTATTGTTATGAGCTTCTTGCACTCGTATTAACCTATTCTGTTGCAGTTAATAAAAGTTTTGGTACCTTGAAGCATAAAAAAAAAC

Intron 4 GTACAGTCAA ... CTTTTTGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	12.37	170	0	24
A2	14.91	137	0	24
A3	9.09	170	1	17
A4	11.11	136	0	17
A5	10.89	90	0	11
A6	9.04	1731	0	172
A7	8.25	1257	0	113
A8	7.96	1203	0	104
A9	6.73	1164	0	84
A10	7.31	964	0	76

>TRINITY_DN45355_c0_g1_i4 from sample A7 / Example spliced isoform

GGCAGGTATGACAAACACACCGACATAAGTTATAAGAATAACAACATCAGGTGTGTGAACAAAATTTGAAACAAACTAGTCGGTCAAATTTCTTGTCCGAACTTGTACAGAGCCTTTGTTCAATTGCAATTCAAGCACCCCCGGGCCCCGATACTTCATCTGTTTGTTGGAGATGGGTTATCGAATAGGTTATCAATTCG
AGGAACAGAGTTGATCGAGATAACATACGCGAAGCATTAAAGATCTGAGAGCGCAGAGTTGATCTTTTTTAGAAGAGGAAGAGAAGAAATGGCGGAGGGAAATGTGTTTGCATGTCACTCTACAGAGGCCTGGCGCTCCAAGCTGCAGGAGGCTATCGATACTAAACGTCTGGTGGTGGTAGATTTCACTGCGACCTGGT
GCGGACCTTGTCGAGTTGTGAGTCCAGTGTTTGTTGAGCTGTCAAAGAAATTCCCAGAAATATTTTTCCTGAAGGTCGATGTGGACGAATTGAGGGATGTAGCTCAAGAGTGGGATGTGGAGGCCATGCCTACATTTATCTTTATCAAGGATGGAAAGGCTGTGGATAAGGTTGTGGGTGCAAAGAAAGAAGAACTTGAG
AGAAAAGTTGCAGCCCTTGCTACACAAGCAGTTCTTGTCACTCAAGCTTAGGCACTGTTTTGATATGCTATATGTTA

>TRINITY_DN45355_c0_g1_i6 from sample A7 / Example unspliced isoform:

CGATGTGGACGAATTGAGGgtacagtcaacattttctttttaagaaaaacgtttgttctttggtatttctaagagaattttatgacaggcagttggtaaatgaagaatgattgcttaaataaatcagatgtttttttaaaagtttgttcttagtatatgtaataaaatttcatggcaggaagttggtaaattaaaaatga
ttattcaaatgaatcatattaattaatataaagcagactaataaaaaattgcctcaatatatgctttgctttttgcagGATGTAGCTCAAGAGTGGGATGTGGAGGCCATGCCTACATTTATCTTTATCAAGGATGGAAAGGCTGTGGATAAGGTTGTGGGTGCAAAGAAAGAAGAACTTGAGAGAAAAGTTGCAGCCCT
TGCTACA

Intron 5 GTGAGTTCTG ... TTTAGAGAAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	54.55	10	1	12
A2	57.89	8	0	11
A3	61.9	8	4	13
A4	53.85	12	4	14
A5	52.94	8	0	9
A6	56.22	102	14	131
A7	51.64	103	10	110
A8	55.74	54	9	68
A9	57.31	73	14	98
A10	56.86	44	9	58

>TRINITY_DN45414_c0_g1_i8 from sample A10 / Example spliced isoform

CAAAATTTGAAACAAACTAGTCGGTCAAATTTCTTGTCCGAACTTGTACAGAGCCTTTGTTCGATTGCAATTCAAACACCCCCATACATCATCTGTTTTTGGAGACGGGTTTTCGAATAGCTTATCAATTCGAGTAACAGGTCATCGATTACGTCATTTATTCGAATAACTTTGAATCTTCTGACGAAAAGAAGAGAAGA
GATGGCGGAGGGAAACGTGTTTGCATGTCACTCTACAGAGGCATGGCGCTCCAAGCTGCAGGAGGCTATCGATACTAAACGTCTGGTGGTGGTAGATTTCACTGCGACCTGGTGCGGACCTTGTCGAGTTGTGAGTCCAGTGTTTGTTGAGCTGTCAAAGAAATTCCCAGAACTTTTTTTCCTGAAGGTCGATGTGGACG
AATTGGGGGATGTAGCCCAAGAGTGGGATGTGGAGGCCATGCCTACATTTATCTTTATCAAGGATGGAAAGGCTGTGGATAAGGTTGTTGGTGCAAAGAAAGATGAACTTGAAAGAAAAGTTGCGGCCCTGGCTACACAAGCAGTCCTTGTTACTCCGGCCTAGGCACTGTTTTGATATGCTATATGACTACACAAGCAG
TCCTTGTTACTCCGGCCTAGGCACTGTTTTGATATGCTATATGTTAATATTTTATGGATGTGGACCTGCTGCAATGTTCAATTTGGGCAGAAAATATTATATACTGTCCTGGTCTTTATTATCTATTTTACGAGCTTGCACTCGTATTAACTTATTCGGTTACAGTTAATAAAAGGTTTGGTACCTTGAAGCACAA

>TRINITY_DN45414_c0_g1_i4 from sample A10 / Example unspliced isoform:

CAAAATTTGAAACAAACTAGTCGGTCAAATTTCTTGTCCGAACTTGTACAGAGCCTTTGTTCGATTGCAATTCAAACACCCCCATACATCATCTGTTTTTGGAGACGGGTTTTCGAATAGCTTATCAATTCGAGTAACAGGTCATCGATTACGTCATTTATTCGAATAACTTTGAATCTTCTGgtgagttctggattctg
tttgttcatagaagtcaatgagttgggctataaattcctaccgaataatcgaaataacacacaagaagcactaaagatctgacacgcgcagtgttgatcgaaagaacacacacttagcattaaagatctgagacgcccggagttcaattttttttagagaagACGAAAAGAAGAGAAGAGATGGCGGAGGGAAACGTGTT
TGCATGTCACTCTACAGAGGCATGGCGCTCCAAGCTGCAGGAGGCTATCGATACTAAACGTCTGGTGGTGGTAGATTTCACTGCGACCTGGTGCGGACCTTGTCGAGTTGTGAGTCCAGTGTTTGTTGAGCTGTCAAAGAAATTCCCAGAACTTTTTTTCCTGAAGGTCGATGTGGACGAATTGGGGGATGTAGCCCAAG
AGTGGGATGTGGAGGCCATGCCTACATTTATCTTTATCAAGGATGGAAAGGCTGTGGATAAGGTTGTTGGTGCAAAGAAAGATGAACTTGAAAGAAAAGTTGCGGCCCTGGCTACACAAGCAGTCCTTGTTACTCCGGCCTAGGCACTGTTTTGATATGCTATATGACTACACAAGCAGTCCTTGTTACTCCGGCCTAGG
CACTGTTTTGATATGCTATATGTTAATATTTTATGGATGTGGACCTGCTGCAATGTTCAATTTGGGCAGAAAATATTATATACTGTCCTGGTCTTTATTATCTATTTTACGAGCTTGCACTCGTATTAACTTATTCGGTTACAGTTAATAAAAGGTTTGGTACCTTGAAGCACAA