sp|Q9ZUN8|HTD1_ARATH ----> Protein HEAT STRESS TOLERANT DWD 1
Intron 1 GTGTTATAAC ... CTTTTATCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 30.51 | 230 | 57.8 | 101 |
| A2 | 30.36 | 172 | 20.4 | 75 |
| A3 | 22.8 | 193 | 30.8 | 57 |
| A4 | 23.75 | 228 | 50.4 | 71 |
| A5 | 31.65 | 95 | 13.8 | 44 |
| A6 | 27.92 | 599 | 66.6 | 232 |
| A7 | 27.59 | 664 | 66.4 | 253 |
| A8 | 29.95 | 456 | 43.2 | 195 |
| A9 | 23.52 | 657 | 99 | 202 |
| A10 | 27.54 | 600 | 76.8 | 228 |
>TRINITY_DN117658_c0_g1_i6 from sample A1 / Example spliced isoformATCTTTATATGAGCAGAAAATTGCTTTTTCATTTATTCAATACTTACAGCAATTATGTGGAAACTTGTTTTTGGAATTAGTAGACTACGAAAATATCCTTAAACCCTACGTTCGGATCCTCATGTTGCGCCGCCCTGAGTAAACCCCCTTATGATAAATTTTCCTTTGCCTCTCGACTGTCCTGTTATTTTGGTTCCTTC
GGAGGCACTCCCTGGTAGGTTCCATTCGCAGCAATGGCTCGCAATCTGAAGAAGAAGAAGAGAATTCCAAAAACGCGCAAGGCTTCCAAGAAAGGCGAGGGGACTTCAAAGACCGCGCAGCGAGATGCCAAGGTTTGGCAGCCGGGAGTTGATAAATTGGAGGAAGGAGAAGAGCTGCAGTGCGACACATCAGCTTATGA
CTGTTTACATGCCTTCCATATTGGGTGGCCTTGTTTGAGTTTTGACATAATACACGATTCCTTAGGACTTGTTCGCACTGAATTTCCTCATACTGTCTTTTGTATAGCTGGGACACAGGCAGATAATGCAGCAAATAATGCAATTGGAATTGTCAAGCTGTCAAATATCAGTGGTAAAAAGCGCAAGTTGCTGCCTGATG
GCGCAGACGATGATGTAGATGAGAGTGATAGCAGTAGTGATGAAGATGATGAGGACGATGATGATTTGGGATTTGAATCAAAGAAGCCTACCTTACAGGTACGTATGGTGGCTCATCAAGGTTGCATAAATCGTATACGCTCGATGCAACAGCAGCCATCTATTGTTGCAACATGGGCTGATAATGGCTACGTGCAGATC
TGGGATTTTAATACACATTTGAGCTCTTTGGCAACATCTGATCCAAGAGTAAGCACAGCATTGAGTGCTGCTATTCATCAGGCTCCGCTACAGATTTTTAGTGGACACAAAGATGAGGGTTACGCATTAGACTGGAGTCCTGTGACACCTGGAAGGCTTCTTTCTGGTGATTGCAAGGGCTGCATACATCTTTGGGAACC
TACATCTGATGGAAAATGGACTGTAGACAAAAGTCCTTTCAAGGGCCACACAGATAGTGTCGAGGATCTGCAGTGGAGCCCAACAGAAGCCAATGTCTTTGCTTCCTGTTCTGTTGATAGAAAGATAGCTATATGGGATGCTCGAATTCGGGAACAACCAGCACTCTCAATAAAGGCACATGATGCAGATGTCAATGTTA
TATCATGGAACCGCCTGGCAAGTTGCATGATATCCTCTGGAAGTGATGACGGAAGCTTCTCCATTTGGGATCTTAGATCATTCAAGGAAGACTCTCTCGTGGCTCATTTTAAATACCATAAGCAGCCTATTACGTCCATTGAATGGAGTCCTCATGAAGCTTCAACTCTTGCAGTGTCATCAGCAGACAATCAGCTCACT
ATTTGGGACCTATCACTAGAGCGTGATGAAGAAGAAGAAGCAGAGTTTAAAGCTGCACTGGAAGAGAACGTTAATGCACCAGAAGATCTGCCCCCACAATTACTTTTTGTTCATCAGGGTCAAAAGGATCTCAAGGAGGTGCATTGGCATGCTCAAATTCCAGGATTACTCATGTCTACTTCTTCTGATGGGTTCAATGT
TTTTAAGCCAACAAACATAGAAAATGTTCTCCCACAGCAATGAGATACGTTTTATCTCATGGAGAACCATAAACATTTGTTAGGATACAAGTCTCTTTTTATCTGTGTTTACTGGCCTCTTTCTTAATTACCAATTCCTTTATTTATCATCGTTTGTACAAATTAAGCTTCCTTTCCCAGCTTGTGGAGCATGCTACACT
CTTCTGACATTGGAGGTTCCATGAAGCCATGAGTTTTGTGTAGACATTTTGCCGGCATAATATTTTAATTGATTGATGGTGCATATAGTGGAGTAACATGGTCCCTTATCTTGATCCTGAAGTATCTTTTTGGATTTTGGTTATTTGAAAAGTGACTTCAACCAAGTTGGTGGAGTTTTTCCCGTGATGAGAGTTGTATT
TGGAGAATGAACTTGTGATATGGAGGCTGATGTTTTGACTGCCCAGATATTTCCACTGTTTATTGTGTTGCAAATGTCTGCATTGATATGTTAGCTGTTCCCGTCTTCAGCAAAAGTTAAATGATCGTCTTTGTTATTTGGATG
>TRINITY_DN117658_c0_g1_i1 from sample A1 / Example unspliced isoform:ATCTGGGATTTTAATACACATTTGAGCTCTTTGGCAACATCTGATCCAAGAGTAAGCACAGCATTGAGTGCTGCTATTCATCAGGCTCCGCTACAGATTTTTAGTGGACACAAAGATGAGGGTTACGCATTAGACTGGAGTCCTGTGACACCTGGAAGGCTTCTTTCTGGTGATTGCAAGGGCTGCATACATCTTTGGGA
ACCTACATCTGATGGAAAATGGACTGTAGACAAAAGTCCTTTCAAGGGCCACACAGATAGTGTCGAGGATCTGCAGgtgttataactgtgaattggatgtcagattgatagaaaaataattcattactaatatttattatttgtggcccacttccgcctttcaattctcttgtactgtgagccatatagtatctttaatt
cgagttgcatggagaagtagtttgtttctatattaacagtattttgtctcttttatcagTGGAGCCCAACAGAAGCCAATGTCTTTGCTTCCTGTTCTGTTGATAGAAAGATAGCTATATGGGATGCTCGAATTCGGGAACAACCAGCACTCTCAATAAAGGCACATGATGCAGATGTCAATGTTATATCATGGAACCGC
CTGGCAAGTTGCATGATATCCTCTGGAAGTGATGACGGAAGCTTCTCCATTTGGGATCTTAGATCATTCAAGGAAGACTCTCTCGTGGCTCATTTTAAATACCATAAGCAGCCTATTACGTCCATTGAATGGAGTCCTCATGAAGCTTCAACTCTTGCAGTGTCATCAGCAGACAATCAGCTCACTATTTGGGACCTATC
ACTAGAGCGTGATGAAGAAGAAGAAGCAGAGTTTAAAGCTGCACTGGAAGAGAACGTTAATGCACCAGAAGATCTGCCCCCACAATTACTTTTTGTTCATCAGGGTCAAAAGGATCTCAAGGAGGTGCATTGGCATGCTCAAATTCCAGGATTACTCATGTCTACTTCTTCTGATGGGTTCAATGTTTTTAAGCCAACAA
ACATAGAAAATGTTCTCCCACAGCAATGAGATACGTTTTATCTCATGGAGAACCATAAACATTTGTTAGGATACAAGTCTCTTTTTATCTGTGTTTACTGGCCTCTTTCTTAATTACCAATTCCTTTATTTATCATCGTTTGTACAAATTAAGCTTCCTTTCCCAGCTTGTGGAGCATGCTACACTCTTCTGACATTGGA
GGTTCCATGAAGCCATGAGTTTTGTGTAGACATTTTGCCGGCATAATATTTTAATTGATTGATGGTGCATATAGTGGAGTAACATGGTCCCTTATCTTGATCCTGAAGTATCTTTTTGGATTTTGGTTATTTGAAAAGTGACTTCAACCAAGTTGGTGGAGTTTTTCCCGTGATGAGAGTTGTATTTGGAGAATGAACTT
GTGATATGGAGGCTGATGTTTTGACTGCCCAGATATTTCCACTGTTTATTGTGTTGCAAATGTCTGCATTGATATGTTAGCTGTTCCCGTCTTCAGCAAAAGTTAAATGATCGTCTTTGTTATTTGGATG
Intron 2 GTATGTGATG ... TTCTTGACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 20.75 | 210 | 0 | 55 |
| A2 | 14.37 | 137 | 0 | 23 |
| A3 | 16.87 | 202 | 1 | 41 |
| A4 | 23.14 | 186 | 2 | 56 |
| A5 | 15.18 | 95 | 0 | 17 |
| A6 | 16.95 | 392 | 0 | 80 |
| A7 | 18.16 | 392 | 0 | 87 |
| A8 | 15.69 | 258 | 0 | 48 |
| A9 | 18.49 | 454 | 0 | 103 |
| A10 | 17.71 | 381 | 0 | 82 |
>TRINITY_DN103161_c0_g1_i3 from sample A4 / Example spliced isoformAGACACTAGCCTTTTATTCCACCTGTTTAGTTTTTATGTTCAATATTCTATGTTATTTGGGAAAAAGACTCGCTGATTTAGTATAGGTAGTTCTTGCCATTTCTTCAACTCATGAAGGGGGTACTTAAGCAGTATCTATGTTTCTCTCCATAGCATTTTCTAATGATCTAAATATTTTGCAGTGTCTATCAATCACATTT
TAGAAAGTAATTAATCCAATCAGTGTGGCTAACTAATTATCCAATTTCAAATCAAGCATTGGATAGGCAAATCTGTAATTTATGTCACTTAAGTTAATTTCATTGAAAATGTTATAATTCTTTTATTCTTGGTGTATTAGTAACATATTCAGTTCTAATTGAGACAATTTGCTGCTGAAGCAGATCTGGGATTTTAATAC
ACATTTGAGCTCTTTGGCAACATCTGATCCAAGAGTAAGCACAGCATTGAGTGCTGCTATTCATCAGGCTCCGCTACAGATTTTTAGTGGACACAAAGATGAGGGTTACGCATTAGACTGGAGTCCTGTGACACCTGGAAGGCTTCTTTCTGGTGATTGCAAGGGCTGCATACATCTTTGGGAACCTACATCTGATGGAA
AATGGACTGTAGACAAAAGTCCTTTCAAGGGCCACACAGATAGTGTCGAGGATCTGCAGTGGAGCCCAACAGAAGCCAATGTCTTTGCTTCCTGTTCTGTTGATAGAAAGATAGCTATATGGGATGCTCGAATTCGGGAACAACCAGCACTCTCAATAAAGGCACATGATGCAGATGTCAATGTTATATCATGGAACCGC
CTGGCAAGTTGCATGATATCCTCTGGAAGTGATGACGGAAGCTTCTCCATTTGGGATCTTAGATCATTCAAGGAAGACTCTCTCGTGGCTCATTTTAAATACCATAAGCAGCCTATTACGTCCATTGAATGGAGTCCTCATGAAGCTTCAACTCTTGCAGTGTCATCAGCAGACAATCAGCTCACTATTTGGGACCTATC
ACTAGAGCGTGATGAAGAAGAAGAAGCAGAGTTTAAAGCTGCACTGGAAGAGAACGTTAATGCACCAGAAGATCTGCCCCCACAATTACTTTTTGTTCATCAGGGTCAAAAGGATCTCAAGGAGGTGCATTGGCATGCTCAAATTCCAGGATTACTCATGTCTACTTCTTCTGATGGGTTCAATGTTTTTAAGCCAACAA
ACGTAGAAAATGTTCTCCCACAGCAATGAGATACGTTTTATCTCATGGAGAACCATAAACATTTGTTAGGATACAAGTCTCTTTTTATCTGTGTTTACTGGCCTCTTTCTTAATTACCAATTCCTTTATTTATCATCGTTTGTACAAATTAAGCTTCCTTTCCCAGCTTGTGGAGCATGCTACACTCTTTCTGACATTGG
AGGTTCCATGAAGCCATGAGTTTTGTGTAGACATTTTGCCGGCATAATATTTTAATTGATTGATGGTGCATATAGTGGAGTAACATGGCCCCTTATCTTGATCCTGAAGTATCTTTTTGGATTTTGGTTATTTGAAAAGTGACTTCAACCAAGTTGGTGGAGTTTTTCCCGTGATGAGAGTTGTATTTGGAGAATGAACT
TGTGATATGGAGGCTGATGTCTTGACTGCCCAGATATTTCCACTGTTTATTGTGTTGCAAATGTCTGCATTGATATGTTAGCTGTTCCCGTCTTCAGCAAAAGTTAAATGATCGTCTTTGTTATTTGGATGTATCTACAGATTTGACATATTCCATCTTCACCTATTTTAGGGCAATCGGCACTTCCAACTCTCTTACAT
TGCCCACTGCATCATTTTATGATATTCTTTTGGGACACTGCTCTGATCATTACCAGGTGTTTGTTTTAGTGTTGGGTATGTTTTCACTTGAACCAGCACTGCTTTCTTCAATGGAGATTCGGTGCAACTTGTAGACACTACGCCCACTATCACCTCAATGTACTTTTCTTTTGCTTAGGG
>TRINITY_DN103161_c0_g1_i6 from sample A4 / Example unspliced isoform:CACCTGGAAGGCTTCTTTCTGgtatgtgatgttctgaatattctatcagtttccatgcaatacaacataagcattattactgctattccaacagaaataaattaggttctttttaaacttcttgacagGTGATTGCAAGGGCTGCATACATCTTTGGGAACCTACATCTGATGGAAAATGGACTGTAGACAAAAGTCCTT
TCAAGGGCCACACAGATAGTGTCGAGGATCTGCAGTGGAGCCCAACAGAAGCCAATGTCTTTGCTTCCTGTTCTGTTGATAGAAAGATAGCTATATGGGATGCTCGAATTCGGGAACAACCAGCACTCTCAATAAAGGCACATGATGCAGATGTCAATGTTATATCATGGAACCGCCTGGCAAGTTGCATGATATCCTCT
GGAAGTGATGACGGAAGCTTCTCCATTTGGGATCTTAGATCATTCAAGGAAGACTCTCTCGTGGCTCATTTTAAATACCATAAGCAGCCTATTACGTCCATTGAATGGAGTCCTCATGAAGCTTCAACTCTTGCAGTGTCATCAGCAGACAATCAGCTCAC
Intron 3 GTGCAATTAC ... ACTGATGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 0.62 | 480 | 4 | 2 |
| A2 | 1.18 | 418 | 2 | 8 |
| A3 | 0.55 | 455 | 0 | 5 |
| A4 | 1.37 | 396 | 3 | 8 |
| A5 | 0 | 284 | 0 | 0 |
| A6 | 0.14 | 730 | 0 | 2 |
| A7 | 0.05 | 1007 | 0 | 1 |
| A8 | 0 | 429 | 0 | 0 |
| A9 | 0 | 847 | 0 | 0 |
| A10 | 0 | 1044 | 0 | 0 |
>TRINITY_DN110683_c0_g1_i5 from sample A2 / Example spliced isoformAGCAATTATGTGGAAACTTGTTTTTGGAATTAGTAGACTACGAAAATATCCTTAAACCCTACGTTCGGATCCTCATGTTGCGCCGCCCTGAGTAAACCCCCTTATGATAAATTTTCCTTTGCCTCTCGACTGTCCTGTTATTTTGGTTCCTTCGGAGGCACTCCCTGGTAGGTTCCATTCGCAGCAATGGCTCGCAATCT
GAAGAAGAAGAAGAGAATTCCAAAAACGCGCAAGGTAACTCTGCATTCAATACTTTTCGAATCTTCAATTTGCTCTGGCAAAAATTACACAATTAAACTTGCAATGGCGACCTGTTAATTGCAGGCTTCCAAGAAAGGCGAGGGGACTTCAAAGACCGCGCAGCGAGATGCCAAGGTTTGGCAGCCGGGAGTTGATAAAT
TGGAGGAAGGAGAAGAGCTGCAGTGCGACACATCAGCTTATGACTGTTTACATGCCTTCCATATTGGGTGGCCTTGTTTGAGTTTTGACATAATACACGATTCCTTAGGACTTGTTCGCACTGAATTTCCTCATACTGTCTTTTGTATAGCTGGGACACAGGCAGATAATGCAGCAAATAATGCAATTGGAATTGTCAAG
CTGTCAAATATCAGTGGTAAAAAGCGCAAGTTGCTGCCTGATGGCGCAGACGATGATGTAGATGAGAGTGATAGCAGTAGTGATGAAGATGATGAGGACGATGATGATTTGGGATTTGAATCAAAGAAGCCTACCTTACAGGTACGTATGGTGGCTCATCAAGGTTGCATAAATCGTATACGCTCGATGCAACAGCAGCC
ATCTATTGTTGCAACATGGGCTGATAATGGCTACGTGCAGATCTGGGATTTTAATACACATTTGAGCTCTTTGGCAACATCTGATCCAAGAGTAAGCACAGCATTGAGTGCTGCTATTCATCAGGCTCCGCTACAGATTTTTAGTGGACACAAAGATGAGGGTTACGCATTAGACTGGAGTCCTGTGACACCTGGAAGGC
TTCTTTCTGGTGATTGCAAGGGCTGCATACATCTTTGGGAACCTACATCTGATGGAAAATGGACTGTAGACAAAAGTCCTTTCAAGGGCCACACAGATAGTGTCGAGGATCTGCAGTGGAGCCCAACAGAAGCCAATGTCTTTGCTTCCTGTTCTGTTGATAGAAAGATAGCTATATGGGATGCTCGAATTCGGGAACAA
CCAGCACTCTCAATAAAGGCACATGATGCAGATGTCAATGTTATATCATGGAACCGCCTGGCAAGTTGCATGATATCCTCTGGAAGTGATGACGGAAGCTTCTCCATTTGGGATCTTAGATCATTCAAGGAAGACTCTCTCGTGGCTCATTTTAAATACCATAAGCAGCCTATTACGTCCATTGAATGGAGTCCTCATGA
AGCTTCAACTCTTGCAGTGTCATCAGCAGACAATCAGCTCACTATTTGGGACCTATCACTAGAGCGTGATGAAGAAGAAGAAGCAGAGTTTAAAGCTGCACTGGAAGAGAACGTTAATGCACCAGAAGATCTGCCCCCACAATTACTTTTTGTTCATCAGGGTCAAAAGGATCTCAAGGAGGTGCATTGGCATGCTCAAA
TTCCAGGATTACTCATGTCTACTTCTTCTGATGGGTTCAATGTTTTTAAGCCAACAAACGTAGAAAATGTTCTCCCACAGCAATGAGATACGTTTTATCTCATGGAGAACCATAAACATTTGTTAGGATACAAGTCTCTTTTTATCTGTGTTTACTGGCCTCTTTCTTAATTACCAATTCCTTTATTTATCATCGTTTGT
ACAAATTAAGCTTCCTTTCCCAGCTTGTGGAGCATGCTACACTCTTTCTGACATTGGAGGCTCCATGAAGCCATGAGTTTTGTGTAGACATTTTGCCGGCATAATATTTTAATTGATTGATGGTGCATATAGTGGAGTAACATGGTCCCTTATCTTGATCCTGAAGTATCTTTTTGGATTTTGGTTATTTGAAAAGTGAC
TTAAACCAAGTTAGTGGAGTTTTTCCCGTGATGAGAGTTGTATTTGGAGAATGAACTTGTGATATGGAGGCTGATGTCTTGACTGCCCAGATATTTC
>TRINITY_DN110683_c0_g1_i4 from sample A2 / Example unspliced isoform:TGGGTGGCCTTGTTTGAGgtgcaattacagagaggcattatttgttttgttacttttgttgatgcaagtttagggaatgacattcaaattttagatggtctttagtgcaaccacaatattttaccatgttgattgtcttgtctataatcactgtacagctgcctcaaactacagaactgattagtcgctttgtttgtgtt
tgactgatgcagTTTTGACATAATACACGATTCCTTAGGACTTGTTCGCACTGAATTTCCTCATACTGTCTTTTGTATAGCTGGGACACAGGTAACCGTCAATTTTGATGCACAAGGGATGTTTTGAATTTTTATTTGAGCACAGGCCTTCTTACATTACAGGAAACTTAAAAAGACTGACATTGTCATTATGGTGGCCC
TTGTACTCGGACTATCTTTTACTATACATGTAAATAGGCAGATGGCACTTGTTGGACCATGTTGCATGCATGGAAGAAAGTACAGTGAAACCTATCTGACTAAATCTAAAACCCCGTTCATTGCATAGCACAATCTGAATTCACAGGAACAAAAGGAATAACTCATTTATAGTCGAATGCAATAAGAAGCACACATGCCT
ATATGTAGTAAGTAAATAGACTTTCATCTAATTGTGATAAGTACAAAACCCTACTACTTCAAGGTACATCCTTCATCCTTTTATACAAGAATTTCCATGTCCATAACTAACATAAATACCTCATTCAAAACGAGGGATGAGCTCATGAGTGATTCTATGATTTGTTATGCTAATATTAAGAATACATTAGGAACATCACA
CTAGGCAAATACCCCCAACATATTATCCAATCCCTCAAGAACGGGTGGTCTCCTGGCAACCTGTAGATCTGAGTTATATTATGG
Intron 4 GTAACTCTGC ... TTAATTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 13.63 | 339 | 26 | 81 |
| A2 | 15.41 | 343 | 49 | 76 |
| A3 | 16.91 | 398 | 43 | 119 |
| A4 | 14.6 | 348 | 43 | 76 |
| A5 | 13.48 | 199 | 29 | 33 |
| A6 | 16.86 | 624 | 92 | 161 |
| A7 | 15.85 | 1014 | 121 | 261 |
| A8 | 17.23 | 370 | 47 | 107 |
| A9 | 15.76 | 839 | 139 | 175 |
| A10 | 14.93 | 937 | 106 | 223 |
>TRINITY_DN110683_c0_g1_i6 from sample A2 / Example spliced isoformAGCAATTATGTGGAAACTTGTTTTTGGAATTAGTAGACTACGAAAATATCCTTAAACCCTACGTTCGGATCCTCATGTTGCGCCGCCCTGAGTAAACCCCCTTATGATAAATTTTCCTTTGCCTCTCGACTGTCCTGTTATTTTGGTTCCTTCGGAGGCACTCCCTGGTAGGTTCCATTCGCAGCAATGGCTCGCAATCT
GAAGAAGAAGAAGAGAATTCCAAAAACGCGCAAGGCTTCCAAGAAAGGCGAGGGGACTTCAAAGACCGCGCAGCGAGATGCCAAGGTTTGGCAGCCGGGAGTTGATAAATTGGAGGAAGGAGAAGAGCTGCAGTGCGACACATCAGCTTATGACTGTTTACATGCCTTCCATATTGGGTGGCCTTGTTTGAGTTTTGACA
TAATACACGATTCCTTAGGACTTGTTCGCACTGAATTTCCTCATACTGTCTTTTGTATAGCTGGGACACAGGCAGATAATGCAGCAAATAATGCAATTGGAATTGTCAAGCTGTCAAATATCAGTGGTAAAAAGCGCAAGTTGCTGCCTGATGGCGCAGACGATGATGTAGATGAGAGTGATAGCAGTAGTGATGAAGAT
GATGAGGACGATGATGATTTGGGATTTGAATCAAAGAAGCCTACCTTACAGGTACGTATGGTGGCTCATCAAGGTTGCATAAATCGTATACGCTCGATGCAACAGCAGCCATCTATTGTTGCAACATGGGCTGATAATGGCTACGTGCAGATCTGGGATTTTAATACACATTTGAGCTCTTTGGCAACATCTGATCCAAG
AGTAAGCACAGCATTGAGTGCTGCTATTCATCAGGCTCCGCTACAGATTTTTAGTGGACACAAAGATGAGGGTTACGCATTAGACTGGAGTCCTGTGACACCTGGAAGGCTTCTTTCTGGTGATTGCAAGGGCTGCATACATCTTTGGGAACCTACATCTGATGGAAAATGGACTGTAGACAAAAGTCCTTTCAAGGGCC
ACACAGATAGTGTCGAGGATCTGCAGTGGAGCCCAACAGAAGCCAATGTCTTTGCTTCCTGTTCTGTTGATAGAAAGATAGCTATATGGGATGCTCGAATTCGGGAACAACCAGCACTCTCAATAAAGGCACATGATGCAGATGTCAATGTTATATCATGGAACCGCCTGGCAAGTTGCATGATATCCTCTGGAAGTGAT
GACGGAAGCTTCTCCATTTGGGATCTTAGATCATTCAAGGAAGACTCTCTCGTGGCTCATTTTAAATACCATAAGCAGCCTATTACGTCCATTGAATGGAGTCCTCATGAAGCTTCAACTCTTGCAGTGTCATCAGCAGACAATCAGCTCACTATTTGGGACCTATCACTAGAGCGTGATGAAGAAGAAGAAGCAGAGTT
TAAAGCTGCACTGGAAGAGAACGTTAATGCACCAGAAGATCTGCCCCCACAATTACTTTTTGTTCATCAGGGTCAAAAGGATCTCAAGGAGGTGCATTGGCATGCTCAAATTCCAGGATTACTCATGTCTACTTCTTCTGATGGGTTCAATGTTTTTAAGCCAACAAACGTAGAAAATGTTCTCCCACAGCAATGAGATA
CGTTTTATCTCATGGAGAACCATAAACATTTGTTAGGATACAAGTCTCTTTTTATCTGTGTTTACTGGCCTCTTTCTTAATTACCAATTCCTTTATTTATCATCGTTTGTACAAATTAAGCTTCCTTTCCCAGCTTGTGGAGCATGCTACACTCTTTCTGACATTGGAGGCTCCATGAAGCCATGAGTTTTGTGTAGACA
TTTTGCCGGCATAATATTTTAATTGATTGATGGTGCATATAGTGGAGTAACATGGTCCCTTATCTTGATCCTGAAGTATCTTTTTGGATTTTGGTTATTTGAAAAGTGACTTAAACCAAGTTAGTGGAGTTTTTCCCGTGATGAGAGTTGTATTTGGAGAATGAACTTGTGATATGGAGGCTGATGTCTTGACTGCCCAG
ATATTTC
>TRINITY_DN110683_c0_g1_i5 from sample A2 / Example unspliced isoform:AGCAATTATGTGGAAACTTGTTTTTGGAATTAGTAGACTACGAAAATATCCTTAAACCCTACGTTCGGATCCTCATGTTGCGCCGCCCTGAGTAAACCCCCTTATGATAAATTTTCCTTTGCCTCTCGACTGTCCTGTTATTTTGGTTCCTTCGGAGGCACTCCCTGGTAGGTTCCATTCGCAGCAATGGCTCGCAATCT
GAAGAAGAAGAAGAGAATTCCAAAAACGCGCAAGgtaactctgcattcaatacttttcgaatcttcaatttgctctggcaaaaattacacaattaaacttgcaatggcgacctgttaattgcagGCTTCCAAGAAAGGCGAGGGGACTTCAAAGACCGCGCAGCGAGATGCCAAGGTTTGGCAGCCGGGAGTTGATAAAT
TGGAGGAAGGAGAAGAGCTGCAGTGCGACACATCAGCTTATGACTGTTTACATGCCTTCCATATTGGGTGGCCTTGTTTGAGTTTTGACATAATACACGATTCCTTAGGACTTGTTCGCACTGAATTTCCTCATACTGTCTTTTGTATAGCTGGGACACAGGCAGATAATGCAGCAAATAATGCAATTGGAATTGTCAAG
CTGTCAAATATCAGTGGTAAAAAGCGCAAGTTGCTGCCTGATGGCGCAGACGATGATGTAGATGAGAGTGATAGCAGTAGTGATGAAGATGATGAGGACGATGATGATTTGGGATTTGAATCAAAGAAGCCTACCTTACAGGTACGTATGGTGGCTCATCAAGGTTGCATAAATCGTATACGCTCGATGCAACAGCAGCC
ATCTATTGTTGCAACATGGGCTGATAATGGCTACGTGCAGATCTGGGATTTTAATACACATTTGAGCTCTTTGGCAACATCTGATCCAAGAGTAAGCACAGCATTGAGTGCTGCTATTCATCAGGCTCCGCTACAGATTTTTAGTGGACACAAAGATGAGGGTTACGCATTAGACTGGAGTCCTGTGACACCTGGAAGGC
TTCTTTCTGGTGATTGCAAGGGCTGCATACATCTTTGGGAACCTACATCTGATGGAAAATGGACTGTAGACAAAAGTCCTTTCAAGGGCCACACAGATAGTGTCGAGGATCTGCAGTGGAGCCCAACAGAAGCCAATGTCTTTGCTTCCTGTTCTGTTGATAGAAAGATAGCTATATGGGATGCTCGAATTCGGGAACAA
CCAGCACTCTCAATAAAGGCACATGATGCAGATGTCAATGTTATATCATGGAACCGCCTGGCAAGTTGCATGATATCCTCTGGAAGTGATGACGGAAGCTTCTCCATTTGGGATCTTAGATCATTCAAGGAAGACTCTCTCGTGGCTCATTTTAAATACCATAAGCAGCCTATTACGTCCATTGAATGGAGTCCTCATGA
AGCTTCAACTCTTGCAGTGTCATCAGCAGACAATCAGCTCACTATTTGGGACCTATCACTAGAGCGTGATGAAGAAGAAGAAGCAGAGTTTAAAGCTGCACTGGAAGAGAACGTTAATGCACCAGAAGATCTGCCCCCACAATTACTTTTTGTTCATCAGGGTCAAAAGGATCTCAAGGAGGTGCATTGGCATGCTCAAA
TTCCAGGATTACTCATGTCTACTTCTTCTGATGGGTTCAATGTTTTTAAGCCAACAAACGTAGAAAATGTTCTCCCACAGCAATGAGATACGTTTTATCTCATGGAGAACCATAAACATTTGTTAGGATACAAGTCTCTTTTTATCTGTGTTTACTGGCCTCTTTCTTAATTACCAATTCCTTTATTTATCATCGTTTGT
ACAAATTAAGCTTCCTTTCCCAGCTTGTGGAGCATGCTACACTCTTTCTGACATTGGAGGCTCCATGAAGCCATGAGTTTTGTGTAGACATTTTGCCGGCATAATATTTTAATTGATTGATGGTGCATATAGTGGAGTAACATGGTCCCTTATCTTGATCCTGAAGTATCTTTTTGGATTTTGGTTATTTGAAAAGTGAC
TTAAACCAAGTTAGTGGAGTTTTTCCCGTGATGAGAGTTGTATTTGGAGAATGAACTTGTGATATGGAGGCTGATGTCTTGACTGCCCAGATATTTC
Intron 5 GTATGGCATT ... CATGTGTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 19.35 | 148 | 41 | 30 |
| A2 | 16.63 | 168 | 46 | 21 |
| A3 | 20.99 | 128 | 49 | 19 |
| A4 | 22.61 | 101 | 46 | 13 |
| A5 | 17.89 | 78 | 19 | 15 |
| A6 | 18.34 | 599 | 158 | 111 |
| A7 | 18.43 | 573 | 159 | 100 |
| A8 | 17.68 | 582 | 148 | 102 |
| A9 | 17.06 | 620 | 165 | 90 |
| A10 | 18.49 | 465 | 124 | 87 |
>TRINITY_DN38171_c0_g1_i3 from sample A6 / Example spliced isoformGCGGGGAATCAGGGGATCTTTATACGAGCAGAAATTGCTTTTTCATTTATTCAATACTTACAGCAATTATGTGGAAACTTGTTTTTGGAATTAGTAGACTACGAAAATATCCTTAAACCCTACGTTCGGATCCTCATGTTGCGCCGCCCTGAGTAAACCCCCTTATGATAAATTTTCCTTTGCCTCTCGACTGTCCTGTT
ATTTTGGTTCCTTCGGAGGCAGTCCCCGGTAGGTTCCATTCGCAGCAATGGCTCGCAATCTGAAGAAGAAGAAGAGAATTCCAAAAACGCGCAAGGCTTCCAAGAAAGGCGAGGGGACTTCAAAGACCGCGCAGCGAGATGCCAAGGTTTGGCAGCCGGGAGTTGATAAATTGGAGGAAGGAGAAGAGCTGCAGTGCGAC
ACATCAGCTTATGACTGTTTACATGCCTTCCATATTGGGTGGCCTTGTTTGAGTTTTGACATAATACACGATTCCTTAGGACTTGTTCGCACTGAATTTCCTCATACTGTCTTTTGTATAGCTGGGACACAGGCAGATAATGCAGCAAATAATGCAATTGGAATTGTCAAGCTGTCAAATATCAGTGGTAAAAAGCGCAA
GTTGCTGCCTGATGGCGCAGACGATGATGTAGATGAGAGTGATAGCAGTAGTGATGAAGATGATGAGGACGATGATGATTTGGGATTTGAATCAAAGAAGCCTACCTTACAGGTACGTATGGTGGCTCATCAAGGTTGCATAAATCGTATACGCTCGATGCAACAGCAGCCATCTATTGTTGCAACATGGGCTGATAATG
GCTACGTGCAGATCTGGGATTTTAATACACATTTGAGCTCTTTGGCAACATCTGATCCAAGAGTAAGCACAGCATTGAGTGCTGCTATTCATCAGGCTCCGCTACAGATTTTTAGTGGACACAAAGATGAGGGTTACGCATTAGACTGGAGTCCTGTGACACCTGGAAGGCTTCTTTCTGGTGATTGCAAGGGCTGCATA
CATCTTTGGGAACCTACATCTGATGGAAAATGGACTGTAGACAAAAGTCCTTTCAAGGGCCACACAGATAGTGTCGAGGATCTGCAGTGGAGCCCAACAGAAGCCAATGTCTTTGCTTCCTGTTCTGTTGATAGAAAGATAGCTATATGGGATGCTCGAATTCGGGAACAACCAGCACTCTCAATAAAGGCACATGATGC
AGATGTCAATGTTATATCATGGAACCGCCTGGCAAGTTGCATGATATCCTCTGGAAGTGATGACGGAAGCTTCTCCATTTGGGATCTTAGATCATTCAAGGAAGACTCTCTCGTGGCTCATTTTAAATACCATAAGCAGCCTATTACGTCCATTGAATGGAGTCCTCATGAAGCTTCAACTCTTGCAGTGTCATCAGCAG
ACAATCAGCTCACTATTTGGGACCTATCACTAGAGCGTGATGAAGAAGAAGAAGCAGAGTTTAAAGCTGCACTGGAAGAGAACGTTAATGCACCAGAAGATCTGCCCCCACAATTACTTTTTGTTCATCAGGGTCAAAAGGATCTCAAGGAGGTGCATTGGCATGCTCAAATTCCAGGATTACTCATGTCTACTTCTTCT
GATGGGTTCAATGTTTTTAAGCCAACAAACGTAGAAAATGTTCTCCCACAGCAATGAGATACGTTTTATCTCATGGAGAACCATAAACACTTGTTAGGATACAAGTCTCTTTTTATCTGTGTTTACTGGCCTCTTTCTTAATTACCAATTCCTTTATTTATCATCGTTTGTACAAATTAAGCTTCCTTTCCCAGCTTGTG
GAGCATGCTACACTCTTTCTGACATTGGAGGCTCCATGAAGCCATGAGTTTTGTGTAGACATTTTGCCGGCATAATATTTTAATTGATTGATGGTGCATATAGTGGAGTAACATGGCCCCTTATCTTGATCCTGAAGTATCTTTTTGGATTTTGGTTATTTGAAAAGTGACTTCAACCAAGTTGGTGGAGTTTTTCCCGT
GATGAGAGTTGTATTTGGAGAATGAACTTGTGATATGGAGGCTGATGTTTTGACTGCCCAGATATTTCCACTGTTTATTGTGTTGCAAATGTCTGCATTGATATGTTAGCTGTTCCCGTCTTCAGCAAAAGTTAAATGATCGTCTTTGTTATTTGGATGTATCTACAG
>TRINITY_DN38171_c0_g1_i2 from sample A6 / Example unspliced isoform:GCGGGGAATCAGGGGATCTTTATACGAGCAGAAATTGCTTTTTCATTTATTCAATACTTACAGCAATTATGTGGAAACTTGTTTTTGGAATTAGTAGACTACGAAAATATCCTTAAACCCTACGTTCGGATCCTCATGTTGCGCCGCCCTGAGTAAACCCCCTTATGATAAATTTTCCTTTGCCTCTCGACTGTCCTGTT
ATTTTGGTTCCTTCGGAGGCAGTCCCCGGTAGGTTCCATTCGCAGCAATGGCTCGCAATCTGAAGAAGAAGAAGAGAATTCCAAAAACGCGCAAGGCTTCCAAGAAAGGCGAGGGGACTTCAAAGACCGCGCAGCGAGATGCCAAGGTTTGGCAGCCGGGAGTTGATAAATTGGAGGAAGGAGAAGAGCTGCAGTGCGAC
ACATCAGCTTATGACTGTTTACATGCCTTCCATATTGGGTGGCCTTGTTTGAGTTTTGACATAATACACGATTCCTTAGGACTTGTTCGCACTGAATTTCCTCATACTGTCTTTTGTATAGCTGGGACACAGGCAGATAATGCAGCAAATAATGCAATTGGAATTGTCAAGCTGTCAAATATCAGTGGTAAAAAGCGCAA
GTTGCTGCCTGATGGCGCAGACGATGATGTAGATGAGAGTGATAGCAGTAGTGATGAAGATGATGAGGACGATGATGATTTGGGATTTGAATCAAAGAAGCCTACCTTACAGGTACGTATGGTGGCTCATCAAGGTTGCATAAATCGTATACGCTCGATGCAACAGCAGCCATCTATTGTTGCAACATGGGCTGATAATG
GCTACGTGCAGATCTGGGATTTTAATACACATTTGAGCTCTTTGGCAACATCTGATCCAAGAGTAAGCACAGCATTGAGTGCTGCTATTCATCAGGCTCCGCTACAGATTTTTAGTGGACACAAAGATGAGGGTTACGCATTAGACTGGAGTCCTGTGACACCTGGAAGGCTTCTTTCTGGTGATTGCAAGGGCTGCATA
CATCTTTGGGAACCTACATCTGATGGAAAATGGACTGTAGACAAAAGTCCTTTCAAGGGCCACACAGATAGTGTCGAGGATCTGCAGTGGAGCCCAACAGAAGCCAATGTCTTTGCTTCCTGTTCTGTTGATAGAAAGATAGCTATATGGGATGCTCGAATTCGGGAACAACCAGCACTCTCAATAAAGGCACATGATGC
AGATGTCAATGTTATATCATGGAACCGCCTGGCAAGTTGCATGATATCCTCTGGAAGTGATGACGGAAGCTTCTCCATTTGGGATCTTAGATCATTCAAGGAAGACTCTCTCGTGGCTCATTTTAAATACCATAAGCAGCCTATTACGTCCATTGAATGGAGTCCTCATGAAGCTTCAACTCTTGCAGTGTCATCAGCAG
ACAATCAGCTCACgtatggcattttgtttttattttttttctcattgaatacatgtattatatttgtaaaattttgcaaagtagcagattgccagtgaatcagtttttgcagagtccatgcaaatggtgtagtcctgatttcagatatgggttttgattttattgggtccaactagggaatttgggggccaagttgatcc
acatctaactcaaataaattattgttctaaacaatggcctattcacatgtgtcagTATTTGGGACCTATCACTAGAGCGTGATGAAGAAGAAGAAGCAGAGTTTAAAGCTGCACTGGAAGAGAACGTTAATGCACCAGAAGATCTGCCCCCACAATTACTTTTTGTTCATCAGGGTCAAAAGGATCTCAAGGAGGTGCAT
TGGCATGCTCAAATTCCAGGATTACTCATGTCTACTTCTTCTGATGGGTTCAATGTTTTTAAGCCAACAAACGTAGAAAATGTTCTCCCACAGCAATGAGATACGTTTTATCTCATGGAGAACCATAAACACTTGTTAGGATACAAGTCTCTTTTTATCTGTGTTTACTGGCCTCTTTCTTAATTACCAATTCCTTTATT
TATCATCGTTTGTACAAATTAAGCTTCCTTTCCCAGCTTGTGGAGCATGCTACACTCTTTCTGACATTGGAGGCTCCATGAAGCCATGAGTTTTGTGTAGACATTTTGCCGGCATAATATTTTAATTGATTGATGGTGCATATAGTGGAGTAACATGGCCCCTTATCTTGATCCTGAAGTATCTTTTTGGATTTTGGTTA
TTTGAAAAGTGACTTCAACCAAGTTGGTGGAGTTTTTCCCGTGATGAGAGTTGTATTTGGAGAATGAACTTGTGATATGGAGGCTGATGTTTTGACTGCCCAGATATTTCCACTGTTTATTGTGTTGCAAATGTCTGCATTGATATGTTAGCTGTTCCCGTCTTCAGCAAAAGTTAAATGATCGTCTTTGTTATTTGGAT
GTATCTACAG
Intron 6 GTTGACACTT ... TTAATAACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 4.1 | 182 | 12.2 | 9.4 |
| A2 | 5.5 | 98 | 9 | 6.8 |
| A3 | 7.62 | 121 | 11.2 | 11.4 |
| A4 | 5.23 | 96 | 3.6 | 6.8 |
| A5 | 4.62 | 60 | 4.4 | 3.6 |
| A6 | 3.78 | 594.8 | 53.2 | 26.2 |
| A7 | 3.15 | 540 | 33.2 | 20.2 |
| A8 | 3.4 | 698.8 | 48.4 | 28.6 |
| A9 | 3.35 | 550.8 | 37.6 | 22.2 |
| A10 | 3.72 | 434.6 | 32.4 | 19.8 |
>TRINITY_DN108382_c0_g1_i3 from sample A3 / Example spliced isoformGGGGATCTTTATATGAGCAGAAAATTGCTTTTTCATTTATTCAATACTTACAGCAATTATGTGGAAACTTGTTTTTGGAATTAGTAGACTACGAAAATATCCTTAAACCCTACGTTCGGATCCTCATGTTGCGCCGCCCTGAGTAAACCCCCTTATGATAAATTTTCCTTTGCCTCTCGACTGTCCTGTTATTTTGGTTC
CTTCGGAGGCACTCCCTGGTAGGTTCCATTCGCAGCAATGGCTCGCAATCTGAAGAAGAAGAAGAGAATTCCAAAAACGCGCAAGGCTTCCAAGAAAGGCGAGGGGACTTCAAAGACCGCGCAGCGAGATGCCAAGGTTTGGCAGCCGGGAGTTGATAAATTGGAGGAAGGAGAAGAGCTGCAGTGCGACACATCAGCTT
ATGACTGTTTACATGCCTTCCATATTGGGTGGCCTTGTTTGAGTTTTGACATAATACACGATTCCTTAGGACTTGTTCGCACTGAATTTCCTCATACTGTCTTTTGTATAGCTGGGACACAGGCAGATAATGCAGCAAATAATGCAATTGGAATTGTCAAGCTGTCAAATATCAGTGGTAAAAAGCGCAAGTTGCTGCCT
GATGGCGCAGACGATGATGTAGATGAGAGTGATAGCAGTAGTGATGAAGATGATGAGGACGATGATGATTTGGGATTTGAATCAAAGAAGCCTACCTTGCAGGTACGTATGGTGGCTCATCAAGGTTGCATAAATCGTATACGCTCGATGCAACAGCAGCCATCTATTGTTGCAACATGGGCTGATAATGGCTACGTGCA
GATCTGGGATTTTAATACACATTTGAGCTCTTTGGCAACATCTGATCCAAGAGTAAGCACAGCATTGAGTGCTGCTATTCATCAGGCTCCGCTACAGATTTTTAGTGGACACAAAGATGAGGGTTACGCATTAGACTGGAGTCCTGTGACACCTGGAAGGCTTCTTTCTGGTGATTGCAAGGGCTGCATACATCTTTGGG
AACCTACATCTGATGGAAAATGGACTGTAGACAAAAGTCCTTTCAAGGGCCACACAGATAGTGTCGAGGATCTGCAGTGGAGCCCAACAGAAGCCAATGTCTTTGCTTCCTGTTCTGTTGATAGAAAGATAGCTATATGGGATGCTCGAATTCGGGAACAACCAGCACTCTCAATAAAGGCACATGATGCAGATGTCAAT
GTTATATCATGGAACCGCCTGGCAAGTTGCATGATATCCTCTGGAAGTGATGACGGAAGCTTCTCCATTTGGGATCTTAGATCATTCAAGGAAGACTCTCTCGTGGCTCATTTTAAATACCATAAGCAGCCTATTACGTCCATTGAATGGAGTCCTCATGAAGCTTCAACTCTTGCAGTGTCATCAGCAGACAATCAGCT
CACTATTTGGGACCTATCACTAGAGCGTGATGAAGAAGAAGAAGCAGAGTTTAAAGCTGCACTGGAAGAGAACGTTAATGCACCAGAAGATCTGCCCCCACAATTACTTTTTGTTCATCAGGGTCAAAAGGATCTCAAGGAGGTGCATTGGCATGCTCAAATTCCAGGATTACTCATGTCTACTTCTTCTGATGGGTTCA
ATGTTTTTAAGCCAACAAACGTAGAAAATGTTCTCCCACAGCAATGAGATACGTTTTATCTCATGGAGAACCATAAACACTTGTTAGGATACAAGTCTCTTTTTATCTGTGTTTACTGGCCTCTTTCTTAATTACCAATTCCTTTATTTATCATCGTTTGTACAAATTAAGCTTCCTTTCCCAGCTTGTGGAGCATGCTA
CACTCTTCTGACATTGGAGGTTCCATGAAGCCATGAGTTTTGTGTAGACATTTTGCCGGCATAATATTTTAATTGATTGATGGTGCATATAGTGGAGTAACATGGCCCCTTATCTTGATCCTGAAGTATCTTTTTGGATTTTGGTTATTTGAAAAGTGACTTCAACCAAGTTGGTGGAGTTTTTCCCGTGATGAGAGTTG
TATTTGGAGAATGAACTTGTGATATGGAGGCTGATGTTTTGACTGCCCAGATATTTCCACTGTTTATTGTGTTGCAAATGTCTGCATTGATATGTTAGCTGTTCCCGTC
>TRINITY_DN108382_c0_g1_i1 from sample A3 / Example unspliced isoform:AATCAATCTGTGAATATTAGTATGTTAGTTTAACATTCATTGTGATGCATGAAATAAAAAGATGGTCAATTGCTTTTGTTCGTTTTCCAGGATACTTACTTTTGATGTTAAATATTCCAGGAAGACTCTCTCGTGGCTCATTTTAAATACCATAAGCAGCCTATTACGTCCATTGAATGGAGTCCTCATGAAGCTTCAAC
TCTTGCAGTGTCATCAGCAGACAATCAGCTCACTATTTGGGACCTATCACTAGAGCGTGATGAAGAAGAAGAAGCAGAGTTTAAAGCTGCACTGGAAGAGAACGTTAATGCACCAGAAGATCTGCCCCCACAATTACTTTTTGTTCATCAGgttgacacttttaatttggcctaagttgctttaattcattttgaaagat
tgggatgtttctgattttagaatatgtaatctggatgcttttgttaataacagGGTCAAAAGGAT
Intron 7 GTAGAGTAGC ... CTAATGCCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 13.72 | 371 | 59 | 9 |
| A2 | 11.48 | 316 | 41 | 4 |
| A3 | 12.15 | 376 | 52 | 11 |
| A4 | 13.13 | 344 | 52 | 0 |
| A5 | 13.6 | 216 | 34 | 4 |
| A6 | 11 | 882 | 109 | 14 |
| A7 | 11.09 | 1163.3 | 145 | 18 |
| A8 | 11.09 | 561.3 | 70 | 5 |
| A9 | 11.5 | 1024 | 133 | 14 |
| A10 | 11.3 | 1115 | 142 | 0 |
>TRINITY_DN117658_c0_g1_i4 from sample A1 / Example spliced isoformATCTTTATATGAGCAGAAAATTGCTTTTTCATTTATTCAATACTTACAGCAATTATGTGGAAACTTGTTTTTGGAATTAGTAGACTACGAAAATATCCTTAAACCCTACGTTCGGATCCTCATGTTGCGCCGCCCTGAGTAAACCCCCTTATGATAAATTTTCCTTTGCCTCTCGACTGTCCTGTTATTTTGGTTCCTTC
GGAGGCACTCCCTGGTAGGTTCCATTCGCAGCAATGGCTCGCAATCTGAAGAAGAAGAAGAGAATTCCAAAAACGCGCAAGGCTTCCAAGAAAGGCGAGGGGACTTCAAAGACCGCGCAGCGAGATGCCAAGGTTTGGCAGCCGGGAGTTGATAAATTGGAGGAAGGAGAAGAGCTGCAGTGCGACACATCAGCTTATGA
CTGTTTACATGCCTTCCATATTGGGTGGCCTTGTTTGAGTTTTGACATAATACACGATTCCTTAGGACTTGTTCGCACTGAATTTCCTCATACTGTCTTTTGTATAGCTGGGACACAGGCAGATAATGCAGCAAATAATGCAATTGGAATTGTCAAGCTGTCAAATATCAGTGGTAAAAAGCGCAAGTTGCTGCCTGATG
GCGCAGACGATGATGTAGATGAGAGTGATAGCAGTAGTGATGAAGATGATGAGGACGATGATGATTTGGGATTTGAATCAAAGAAGCCTACCTTACAGGTACGTATGGTGGCTCATCAAGGTTGCATAAATCGTATACGCTCGATGCAACAGCAGCCATCTATTGTTGCAACATGGGCTGATAATGGCTACGTGCAGATC
TGGGATTTTAATACACATTTGAGCTCTTTGGCAACATCTGATCCAAGAGTAAGCACAGCATTGAGTGCTGCTATTCATCAGGCTCCGCTACAGATTTTTAGTGGACACAAAGATGAGGGTTACGCATTAGACTGGAGTCCTGTGACACCTGGAAGGCTTCTTTCTGGTGATTGCAAGGGCTGCATACATCTTTGGGAACC
TACATCTGATGGAAAATGGACTGTAGACAAAAGTCCTTTCAAGGGCCACACAGATAGTGTCGAGGATCTGCAGGTGTTATAACTGTGAATTGGATGTCAGATTGATAGAAAAATAATTCATTACTAATATTTATTATTTGTGGCCCACTTCCGCCTTTCAATTCTCTTGTACTGTGAGCCATAGAGTATCTTTA
>TRINITY_DN117658_c0_g1_i8 from sample A1 / Example unspliced isoform:TTATGGGAATAGAATCTGGGTAGGGAGGATAACACTCCATCCACAACCACTTGTCTGGACCCAATTGACAACTGCAGTATACCTTTTTAATTCCAAAGGTGTTAAAGATTATCTGCTGTATCCTTCCAGTTTATCATGCTCTGGGTCCTGTTCTTTTGTTGTTAGATTCATATTAAAATATCTTAAGGTGCGTTTGTTTA
GAGAAGAGCCTTCTCTCTTAATCATGGAGTATTTGGATTATATTGAGTTTTAACACACTGAAAAGATAGTTTGATTAAAACTCCTCAAGTGGCCTTTAGCAGTGGTCTTGTATGAAATATTGAAGCTGAATCAGAGATCAATTTTTCGTATATTGTTTTCAACATGTATATTACGTGTCCTAAAATCACTTATCATTGAA
CTTCAGGCAGATAATGCAGCAAATAATGCAATTGGAATTGTCAAGCTGTCAAATATCAGTGGTAAAAAGCGCAAGTTGCTGCCTGATGGCGCAGACGATGATGTAGATGAGAGTGATAGCAGTAGTGATGAAGATGATGAGGACGATGATGATTTGGGATTTGAATCAAAGAAGCCTACCTTACAGgtagagtagcatcc
aacttttgtttatgcatgtcttctgttaatagcaaattatttaggctcatttatatgatcagcgtgaaactctaattggcagctgttttttcctgtagtgatgccatttcagctagatatattgcataatactgattgcgagttctaatgccagGTACGTATGGTGGCTCATCAAGGTTGCATAAATCGTATACGCTCGA
TGCAACAGCAGCCATCTATTGTTGCAACATGGGCTGATAATGGCTACGTGCAGGTAAACTTGATTTTTTAAACAATTACCTGGAATGTGTGTTATGAGCCTGATTTTGTAATATAGTCTGATGATTGATCTTACTGAAATAACAGAATAACTTCAGCTTGTTCTAGAAAAATAAATTCAGCAAGTGTAATGCAGCAGATT
TTAGATAATAGCAACTGTAAAGTTCAACACATTAGAAGGAATCACAACCATTATATAGTCTGAACTACAACACAGTAAATCTGCAAATTCAGAGTCTAAACAGAAGATATAAACTTTAACAGAGTAGAAAGTATTGCATCAACAACCAGATACACTCTCCTGAGAAGATATGGATGCCAACTCAGGCCCTGAATCATCCA
AGGCAGTAACGGCACTGCTCTTGGCCTAACCTGGTCTCCTATGCAATGCCTGCAATAATAGAACTCTACATGCTTTCATTCTCATTGCACAAGCCCATAAATAGGCAGAGGGATACAAGAATTGCTAATTCAAAATCCATGGTTGACGCTAAAGAAGAGGCTCATAAACACATACTTGTCAACAAAGTTCATCCACAGAG
ATATAGAAAATGCACATAATGAGGTGACTCTGCTCCACGGCATATGCTCCACAACCCCTATAAGCTTTGGCTCACGATACTAGACCG