NA ----> NA
Intron 1 GTATCATTTT ... TCTATTCCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 33.33 | 2 | 2 | 0 |
| A2 | 100 | 0 | 2 | 0 |
| A3 | 100 | 0 | 3 | 4 |
| A4 | 37.5 | 10 | 3 | 9 |
| A5 | 55.56 | 2 | 2 | 3 |
| A6 | 44.44 | 5 | 2 | 6 |
| A7 | 16.67 | 10 | 3 | 1 |
| A8 | 66.67 | 2 | 2 | 6 |
| A9 | 81.82 | 1 | 5 | 4 |
| A10 | 100 | 0 | 1 | 2 |
>TRINITY_DN30107_c0_g1_i2 from sample A6 / Example spliced isoformGATCGTTTCTTCATTAGCATTCTAGGTTGGAAGGTGACCTGATTCAAACCTCTTTCAATGCCTTTGGTCGAACCTTACCTGCTCCATTCAATTCTATACAAACGAGGAGTGACGGTGAGGTTGTCATTTGCCTTCTATTCCCAGATGTTCAACAAACATCTGATTCGCGAATGTGATGGCCAGCAGAGAACTGGTAGGGG
AATGGCACGCGTTTCAGACCGTAAGAGAGTAGATCTCGTCTCTGAGTTGTCTATCCTGGGCCGAGATCTGTTACGCCTCAAATTGTTGTTTTTATTTTGACTTTCCAAGGTCTGCCTAACAAAAACGCCTATTTTGGCAATCTGGAGCTTGAAAAAAAGGCTAAAGCAGTGCAACCCATGAATTAAAAATAGTTTACAGG
TTGGCCACCAATAGTGAGGGACCATGACTGTTTGAATCAAAAAATGTTGAGCTATGGTTCCGTTTCCCGTCATTTTATTTGCGAAATGGGTTTTGGCAATTTTTTTATTTTTCCCATTCTGCCTGGGACAAAAATTCATGAACTCTGCTAGTGTGGTGTCGTGGAAGTCCCCCCTTTCATATTTTCCAGTTCATTTCTGG
TCACCTCAATTGCTGTTGGGAGGAGATTACATGTTCGTCAAATGGGGCTTTGCAAGAGTTGATCTAAATAAGGTGCCTTGAGGGTTGCATTTGGCCTGGGCATTTGTACCAGAGTTCAAGTAAAAGCTTTTGGGGGTAAACAATGAGTAATAATGAGCCGTAAAATTCGAACCCTCTTATTCGCCCTTTGAAACGAATTA
TACAACAGAGACAAAGAGCCCTGCAATTTAGCTGGATGCCATGGCGGACTTGATAACCAGCGACGACCCTGGAAGGAATTGAGAAGAATGATGATGAAGCCATTTTGCCCAATGCTTCTCCATTGGCGGACAAGGTATGCTTGTATGCTTATTGGGATGCTTCTGGACAACTATGAACCTACAAATCGATAAAGGAAGGA
AAATAAACAGCCAAGAGCTAAAGAAGAGGTCATTACGATGCATGTAATGGGTTGGCAGAGTTTAGGAAGGTGTATGGATATACAAAGAGAAACAGAGAAGATGAACAATACACTTAATCTCTTGCTGGAACGTGTATGTTGACCAACAACAAGGGGTTGTCTTATTTGCATATATATGTACCATTACGACTTGAACTTCT
TTAGAAGTTCCAAGTCACTCCATGTATTTGTTCTGATTTCATTCCATTGTTTTGAAAATTGTTTCTAGCACGCCTCTTTCTATTCTTCTTTATGAACTATGTTTGCTTCAAATGTTTGGAAAACAATTGATTTGATACTAATATAGTTTTTATGGGTTGGCCC
>TRINITY_DN30107_c0_g1_i3 from sample A6 / Example unspliced isoform:GATCGTTTCTTCATTAGCATTCTAGGTTGGAAGGTGACCTGATTCAAACCTCTTTCAATGCCTTTGGTCGAACCTTACCTGCTCCATTCAATTCTATACAAACGAGGAGTGACGGTGAGGTTGTCATTTGCCTTCTATTCCCAGATGTTCAACAAACATCTGATTCGCGAATGTGATGGCCAGCAGAGAACTGGTAGGGG
AATGGCACGCGTTTCAGACCGTAAGAGAGTAGATCTCGTCTCTGAGTTGTCTATCCTGGGCCGAGATCTGTTACGCCTCAAATTGTTGTTTTTATTTTGACTTTCCAAGGTCTGCCTAACAAAAACGCCTATTTTGGCAATCTGGAGCTTGAAAAAAAGGCTAAAGCAGTGCAACCCATGAATTAAAAATAGTTTACAGG
TTGGCCACCAATAGTGAGGGACCATGACTGTTTGAATCAAAAAATGTTGAGCTATGGTTCCGTTTCCCGTCATTTTATTTGCGAAATGGGTTTTGGCAATTTTTTTATTTTTCCCATTCTGCCTGGGACAAAAATTCATGAACTCTGCTAGTGTGGTGTCGTGGAAGTCCCCCCTTTCATATTTTCCAGgtatcattttt
cgcaacactgatatatcatgactgtatttcttcttctaccataaatgttaatgcaatgccatttataacaaacatgaggcattcatgtttatgctcgctatatgaggagtctattccagTTCATTTCTGGTCACCTCAATTGCTGTTGGGAGGAGATTACATGTTCGTCAAATGGGGCTTTGCAAGAGTTGATCTAAATA
AGGTGCCTTGAGGGTTGCATTTGGCCTGGGCATTTGTACCAGAGTTCAAGTAAAAGCTTTTGGGGGTAAACAATGAGTAATAATGAGCCGTAAAATTCGAACCCTCTTATTCGCCCTTTGAAACGAATTATACAACAGAGACAAAGAGCCCTGCAATTTAGCTGGATGCCATGGCGGACTTGATAACCAGCGACGACCCT
GGAAGGAATTGAGAAGAATGATGATGAAGCCATTTTGCCCAATGCTTCTCCATTGGCGGACAAGGTATGCTTGTATGCTTATTGGGATGCTTCTGGACAACTATGAACCTACAAATCGATAAAGGAAGGAAAATAAACAGCCAAGAGCTAAAGAAGAGGTCATTACGATGCATGTAATGGGTTGGCAGAGTTTAGGAAGG
TGTATGGATATACAAAGAGAAACAGAGAAGATGAACAATACACTTAATCTCTTGCTGGAACGTGTATGTTGACCAACAACAAGGGGTTGTCTTATTTGCATATATATGTACCATTACGACTTGAACTTCTTTAGAAGTTCCAAGTCACTCCATGTATTTGTTCTGATTTCATTCCATTGTTTTGAAAATTGTTTCTAGCA
CGCCTCTTTCTATTCTTCTTTATGAACTATGTTTGCTTCAAATGTTTGGAAAACAATTGATTTGATACTAATATAGTTTTTATGGGTTGGCCC