NA ----> NA
Intron 1 GTTAAGTGTT ... AATCATGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 35.14 | 24 | 16 | 10 |
| A2 | 46.51 | 23 | 30 | 10 |
| A3 | 49.61 | 32 | 44 | 19 |
| A4 | 74.19 | 4 | 21 | 2 |
| A5 | 100 | 0 | 13 | 1 |
| A6 | 46.49 | 412 | 550 | 166 |
| A7 | 47.71 | 268 | 352 | 137 |
| A8 | 44.86 | 346 | 412 | 151 |
| A9 | 45.43 | 370 | 417 | 199 |
| A10 | 43.28 | 152 | 170 | 62 |
>TRINITY_DN100925_c0_g1_i2 from sample A1 / Example spliced isoformTAAAACGCAAAGATACCAGTCAATAAAGTCATACTTAAAGAAATCAAAAGTTTAAATTCCTTGTCACCTGAATAAGGGATCAGTCAAAGGATTGGGTTTTGTCATCTGAATCAGGTATCGGTCAAAGGATTGGGTCGCCTCTGAGGGATTGAGTCTCCATTCGAATCAAAAAGCTGAAAGCTGCTTTGAATTGGGTGCAG
AGAAAATTAATTTGTCCATACATTTGTCGTTCAAAGTTTCGATTCTAGCAGGGGACAGGCCGGAGATGGGCGACAGACCCCATGTACGTTATTCTGCATTAGCCAGCGAAGATAACCAAAATTATCAGCAGCAGCAGAGGAGGCGAACATCGGCATCATCACCATCGGATCGATATGAAGAAGATGATCATTATGACGAT
CCTCGCTTCAAGTACGAGCCCAAACAGAGAATTCCATGGAAATCCATTGCCCTTGCCCTCTTTCTGCTCTCCTTCGGTTCATTCCTTTTACTCGTCTCCTACTTCGTCTTCACTGGTCACATGGGCGGCGATACATCTCAAGCCTATGGCTTCCTGGTGATAGGATTCCTCATGTTTCTTCCAGGGTTTTATGAGACCAG
GATAGCATATTATTCATGGAGAGGTTCTAAAGGCTATACATATTCCCGCATACCTGATTACTAAGCATGTGCATCTGTTCGCATTGACAAATTACAATAGATGAGTAAGAATTATCACAGAAATCTTCCATTTTTTAAGCCCATTGTTTCAACAAGGGCTTTTTCTATGACTAAATGATTGTAATTATGATTGAAAATAC
TAGCACAATTATAAACGTGCATCATTCATTAGCTTTCTTGCTTTTTATGACTGCATTATACTGTTT
>TRINITY_DN100925_c0_g1_i1 from sample A1 / Example unspliced isoform:TAAAACGCAAAGATACCAGTCAATAAAGTCATACTTAAAGAAATCAAAAGTTTAAATTCCTTGTCACCTGAATAAGGGATCAGTCAAAGGATTGGGTTTTGTCATCTGAATCAGGTATCGGTCAAAGGATTGGGTCGCCTCTGAGGGATTGAGTCTCCATTCGAATCAAAAAGCTGAAAGCTGCTTTGAATTGGGTGCAG
AGAAAATTAATTTGTCCATACATTTGTCGTTCAAAGTTTCGATTCTAGCAGGGGACAGGCCGGAGATGGGCGACAGACCCCATGTACGTTATTCTGCATTAGCCAGCGAAGATAACCAAAATTATCAGCAGCAGCAGAGGAGGCGAACATCGGCATCATCACCATCGGATCGATATGAAGAAGATGATCATTATGACGAT
CCTCGCTTCAAGTACGAGCCCAAACAGAGAATTCCATGGAAATCCATTGCCCTTGCCCTCTTTCTGCTCTCCTTCGGTTCATTCCTTTTACTCGTCTCCTACTTCGTCTTCACTGGTCACATGGGCGGCGATACATCTCAAGCCTATGGCTTCCTGGTGATAGGATTCCTCATGTTTCTTCCAGGGTTTTATGAGACCAG
GATAGCATATTATTCATGGAGAGGTTCTAAAGGCTATACATATTCCCGCATACCTGATTACTAAGCATGgttaagtgtttttcaggagtttcatttactatatagttctttcttatcttcttatcaacgcagtagaattgtaactagttctcacttttgtcctttgaactaagttattttaaacagtaaaagaaagcaaa
ctacttataagattccaattgttcatgctgttttctttttttgcaatcatgcagTGCATCTGTTCGCATTGACAAATTACAATAGATGAGTAAGAATTATCACAGAAATCTTCCATTTTTTAAGCCCATTGTTTCAACAAGGGCTTTTTCTATGACTAAATGATTGTAATTATGATTGAAAATACTAGCACAATTATAAA
CGTGCATCATTCATTAGCTTTCTTGCTTTTTATGACTGCATTATACTGTTT