NA ----> NA
Intron 1 GTAATATTTT ... TTACTACTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 13.48 | 154 | 24 | 1 |
| A2 | 21.88 | 100 | 28 | 12 |
| A3 | 19.38 | 129 | 31 | 0 |
| A4 | 20.72 | 88 | 23 | 6 |
| A5 | 13.46 | 45 | 7 | 2 |
| A6 | 14.06 | 275 | 45 | 1 |
| A7 | 13.51 | 653 | 102 | 10 |
| A8 | 15.04 | 672 | 119 | 3 |
| A9 | 18.1 | 534 | 118 | 17 |
| A10 | 18.74 | 438 | 101 | 7 |
>TRINITY_DN40967_c0_g1_i1 from sample A8 / Example spliced isoformCAATCATATTTAAACCCTCTACTCGGCCTTTTTCTGCAACAACCCTATTTTAAAAAAGTAAAAGACATCAATCCAACTCAGCGGTTCACAGCGGCCCTTGTAAAAGGCAAAAATATATTTTCCCCATACTCCGTCAATTCCAACTGGTCAACCGAACTGCCCACGGCGTAGGGAATGTTTCGCAAAATCTTGCTTGCCCG
GCAAGACATCCATTGTCCCATCGGCTTGAACTCAAAACTCTTCCAATTATAAACAGAAATGATGAGAAAGACCCCAAATGCATCCGATCCTTGATTTTACAGGATTTTTTTTTTTTGGGTTCTTGGTTTATAATCATAATAAATAATGATTCTTCCATTGTTCAAGTTGGGGACATTGGCTATCAAGACGCTAAGCAAGC
CCATCGCCTCTAGGATCAAAGCACAGGCCGCTCACCATCCCCGTTTCCGGACTCTCATCGTCAATTTTGCCCAGACAAATCATAAATTCAGTACACAATTGCAAAGGCGGATATATGGACATGCCACTAATGTAGCAATTCGCCCCTTGGATGAGGAGAAAGCTGTTCAAGCTGCTACGGATCTTCTGGGAGAGGTTTTT
ATATTTTCGGTTGGGGGAGCTGCTGTGATATTTGAAGTGCAAAGGAGCTCCAGATCAGAAGCTCGCAAGGAAGAGGCCCGCAAACAAGAATTGGAAGCCTTGAGGCAAAGAGAAGATGATTTGGCACGGGAATTGGTGCTTCTAAAGCAAAGAGTTAACGAGTTAGAGGATTATACAAGGGGGCGTGGAATTGCTGGTAT
TTTCAGCCTCCGAAAAAATGGGGGAAATGAAGAGAAAAGTCAAACACAAGCAGCACCTGCATGATGCATATTACCTTCAAAAGGCTCATGTCTATGTGTAATAACAGTTATTTTTTTACTGAGTCAGATCTGAACTGCCTTTTCTTGCCATTCTTGTCATCAGAAACACATAAAAACAGCTCATCTTGCCCAGATTCAAC
CTTGTTTTCATTAGTGAAGATTGGCCTTAATTGTAATGGTCAAATGGCATTTTGCAATATCTACAATCGTTCATGTAGCAGTGCTCTCGTTGAATAAGAAAAAATATGCTGGAAAAATGTTTGTAGGAAAATAGAAACTGAAGAAGCTGAACTCACATTAGACCTTGAGAATGTATCAGTTGTTTGAGCAATTTTTTTTC
AGCTCAAAGATCTAGCAGTTTCTCAATGCATGTTGAGTTTGAACTTTGAAGCTGCCAATAAGAGAGGTCATCTCATCATATTTTTTAAGGTCAGACATGTCAAATTATTGGTACAAAATTATCTTGTCACAAACAATATTGTGAAATACATTTATAAATAATAACTCAGTATTGGCCAGTTTAGTTACTGTTATTTATGA
CACTTAAATAACCACCATTATGGCCTAGTTTAGTTACTGC
>TRINITY_DN40967_c0_g1_i2 from sample A8 / Example unspliced isoform:TTACACTTGAAGTTTTTCTCTCAAGTATGCCAACCGTGATAGTATCTTTGTCTTGCATTATCTGACTGTTTACTCATTTGCAGACAAATCATAAATTCAGTACACAATTGCAAAGGCGGATATATGGACATGCCACTAATGTAGCAATTCGCCCCTTGGATGAGGAGAAAGCTGTTCAAGCTGCTACGGATCTTCTGGGA
GAGGTTTTTATATTTTCGgtaatatttttttaccaagttttattttgttgcagtagacatgaggaattctttacttggatgattatgcatctctgttgctcgcatagaagtgatgttggttctgaactttcatatagacaacagatcctatgatgatattgatttttaacgcatcatatgtaaatgaagattatatataa
acaaactttaggcaaacagtgaatacttaaaatttaaaacagaactgcaagctttatttatagtttatgtacagctagcttgtatttccgtctctgcattttctaggtacttggaagttgtttcacatctgagcaaattgtcactgcattgcacattgattgaggaattttactactagGTTGGGGGAGCTGCTGTGATA
TTTGAAGTGCAAAGGAGCTCCAGATCAGAAGCTCGCAAGGAAGAGGCCCGCAAACAAGAATTGGAAGGGTGATCAGATTTTTGCACTTGCGATTTTTATCACAAACAGGAGTTCCATAGAGGAGGCTGATGGATGTTTGCCTCAGGTACACTTCTAGCATTTTTCAGCTGACAGATCAAGATGACTTATTTTGATGGAGT
TGGTGTTAGATGTGCTCCAATGTTATGCCATCTTCCTTCTCCATATGCTTGATGATTTTTCTCTAGCTTGGATCAAGTTTGGATCATGATTTTGGTGGTCGATGCCGTTACTCTATAAGGGCTCATAACACTCTAAATTGTTCTCTTGCTAGGTTGATTACATGGTGTGTTCATAATTTACCTTTAGGTAAGTGTCATTT
TGTCAGTTGGGTTGTGTCCCC