sp|Q9FFZ1|PPH_ARATH ----> Pheophytinase, chloroplastic
Intron 1 GTATGCTAGT ... GTGAGTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 4 | 12 | 1 | 0 |
| A2 | 20 | 6 | 3 | 0 |
| A3 | 16.67 | 10 | 3 | 1 |
| A4 | 28 | 9 | 0 | 7 |
| A5 | 16.67 | 5 | 0 | 2 |
| A6 | 23.26 | 33 | 9 | 11 |
| A7 | 23.44 | 49 | 21 | 9 |
| A8 | 16.13 | 26 | 6 | 4 |
| A9 | 25 | 36 | 16 | 8 |
| A10 | 20 | 48 | 15 | 9 |
>TRINITY_DN38520_c0_g1_i2 from sample A9 / Example spliced isoformTATACATTTCTATCTTCTGCTAGAAAATGAAAGGATCGTATGCTTTAATATGCTGCTTTTAAATAAAGCGTAAATACCTAGACTGTGTACGTCACAGGACAGAGGCGAGGATGCTGTTAACTTCCTCATCATCACGTTCCCTGCTGCTCACGCCCGTTCCTCGATTTGATCATGGCCTTCCAAGCTTTTTGGTGCGCCAA
TTTAATTGCTTGCCTTTATCTGTTACACGCGCGTCCTGGACACGGCTGAAAAGTTTTGATTCTGCTTACAAGGAGGCATCAATATGTTACAGAAGAAAGAGAAGTAGTCAGTGCTATGCGTCATCATCATCGTCAGGCGGCAATGCGGATGAATATGGTGGGCGTTACATCGGCAAGGAACTGGAGGCAATATACACAGG
ATGTAACAGCTGGGAATGGAAAGGGTATAAGATTAACTACGTTGTTGAAGGAGATGGAAGGGGACCAGCATTGCTTCTTGTTCATGGGTTTGGGGCGTCCCTTGGTCACTGGCGCAGGAATATACGAGTCTTGGCTGAGAGGTACACTGTTTATGCTATTGATTTACTGGGCTTTGGTGCATCAGATAAGCCTACAAATT
TCAACTATACAATGGAAGATTGGGCTGAGCTACTCTTGGACTTCTCAAGGGATTTGATACAGGCACCAACAGTATTGATTGGAAACTCTGTTGGAAGCTTGGCTTGTCTTATTGCGGGTGCAGAAGCTCCGCAAAACGTGGTAAGGGGCATTGTATTACTCAACTGTGCGGGTGGCATGAACAACAAGGCAATTGTTGAT
GATTGGCGGATTAAACTCATTACTCCTTTACTCTGGCTTATAGACTTTTTACTCAATCAGAGGAAAATTGCATCAGCATTATTTGAACGCCTCAAAACAAGAGAAAACTTGAAGAACATATTAAGTGCAGTCTATAGCAACAAAGCATCTGTTGATGATGAATTGGTACAGGTAATAAAGAAGCCTGCAGATTATCCAGG
GGCTTTAGATGTTTTTGTTTCTGTAGTGACGGGACCACCAGGGCCAAATCCAATATCCTTGATGCCCAATATCTCAATACCTGTTTTGGTTTTATGGGGTGATGAGGATCCATTCACTCCGCTCGATGGTCCTGTTGGAAAGTATTTCTCTTCTCTGCCATCACTATTATCGAATGTACAGTTTTTTGTCCTCCGAGGGG
TGGGGCACTGTCCTCAGGATGATAGACCTGATCTGGTTCATGAAAAACTTCTTACTTGGCTTGATAGCCTTCCTGCTACTCTTTCAGCAGCCTCAATGAAATAATCTGTTTGAATTTTTGTTTCACATAGAAAATGTGATTAACTCTGGGTATTATTCCTGGATGCTCTCATTCCCTTCCATTTACCCACAAAAGCACAT
AGACAAACATGTTGATGAAATACCTAATTGATGGTGACTCAATAATGAGATGGAAAATGTGCATGAAACTTAAATATCTTTGGACATTTTCAAGTCAGAAGCTTGACGAGAAAAAGATCACAATCATGTTTGCCAGTTTGAAACTCGGACCAAATGAAAAATGTTAGTCATGCTACTTGTGAAAAATGTTACTTATGATA
AGAAAATATTTTCTTTTCAATGTTTAACTTACATGTTTTAAGG
>TRINITY_DN38520_c0_g1_i1 from sample A9 / Example unspliced isoform:TATACATTTCTATCTTCTGCTAGAAAATGAAAGGATCGTATGCTTTAATATGCTGCTTTTAAATAAAGCGTAAATACCTAGACTGTGTACGTCACAGGACAGAGGCGAGGATGCTGTTAACTTCCTCATCATCACGTTCCCTGCTGCTCACGCCCGTTCCTCGATTTGATCATGGCCTTCCAAGCTTTTTGGTGCGCCAA
TTTAATTGCTTGCCTTTATCTGTTACACGCGCGTCCTGGACACGGCTGAAAAGTTTTGATTCTGCTTACAAGGAGGCATCAATATGTTACAGAAGAAAGAGAAGTAGTCAGTGCTATGCGTCATCATCATCGTCAGGCGGCAATGCGGATGAATATGGTGGGCGTTACATCGGCAAGGAACTGGAGGCAATATACACAGG
ATGTAACAGCTGGGAATGGAAAGGGTATAAGATTAACTACGTTGTTGAAGGAGATGGAAGGGGACCAGCATTGCTTCTTGTTCATGGGTTTGGGGCGTCCCTTGGTCACTGGCGCAGGAATATACGAGTCTTGGCTGAGAGGTACACTGTTTATGCTATTGATTTACTGGGCTTTGGTGCATCAGATAAGCCTACAAATT
TCAACTATACAATGGAAGATTGGGCTGAGCTACTCTTGGACTTCTCAAGGGATTTGATACAGGCACCAACAGTATTGATTGGAAACTCTGTTGGAAGCTTGGCTTGTCTTATTGCGGGTGCAGAAGCTCCGCAAAACGTGGTAAGGGGCATTGTATTACTCAACTGTGCGGGTGGCATGAACAACAAGGCAATTGTTGAT
GATTGGCGGATTAAACTCATTACTCCTTTACTCTGGCTTATAGACTTTTTACTCAATCAGAGGAAAATTGCATCAGCATTATTTGAACGCCTCAAAACAAGAGAAAACTTGAAGAACATATTAAGTGCAGTCTATAGCAACAAAGCATCTGTTGATGATGAATTGGTACAGgtatgctagtttgctgcaatgcgttttac
tctggacaaggattttctgggcaaatagttaatatataatttagtgagtgcagGTAATAAAGAAGCCTGCAGATTATCCAGGGGCTTTAGATGTTTTTGTTTCTGTAGTGACGGGACCACCAGGGCCAAATCCAATATCCTTGATGCCCAATATCTCAATACCTGTTTTGGTTTTATGGGGTGATGAGGATCCATTCACT
CCGCTCGATGGTCCTGTTGGAAAGTATTTCTCTTCTCTGCCATCACTATTATCGAATGTACAGTTTTTTGTCCTCCGAGGGGTGGGGCACTGTCCTCAGGATGATAGACCTGATCTGGTTCATGAAAAACTTCTTACTTGGCTTGATAGCCTTCCTGCTACTCTTTCAGCAGCCTCAATGAAATAATCTGTTTGAATTTT
TGTTTCACATAGAAAATGTGATTAACTCTGGGTATTATTCCTGGATGCTCTCATTCCCTTCCATTTACCCACAAAAGCACATAGACAAACATGTTGATGAAATACCTAATTGATGGTGACTCAATAATGAGATGGAAAATGTGCATGAAACTTAAATATCTTTGGACATTTTCAAGTCAGAAGCTTGACGAGAAAAAGAT
CACAATCATGTTTGCCAGTTTGAAACTCGGACCAAATGAAAAATGTTAGTCATGCTACTTGTGAAAAATGTTACTTATGATAAGAAAATATTTTCTTTTCAATGTTTAACTTACATGTTTTAAGG