NA ----> NA
Intron 1 GTAAGACAGC ... GAGTTTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 13.58 | 175 | 30 | 25 |
| A2 | 13.78 | 122 | 19 | 20 |
| A3 | 14.8 | 118 | 20 | 21 |
| A4 | 13.4 | 139 | 17 | 26 |
| A5 | 13.45 | 74 | 8 | 15 |
| A6 | 18.64 | 168 | 39 | 38 |
| A7 | 17.63 | 236 | 43 | 58 |
| A8 | 17.54 | 221 | 50 | 44 |
| A9 | 20.64 | 173 | 40 | 50 |
| A10 | 20.58 | 193 | 63 | 37 |
>TRINITY_DN95032_c0_g1_i2 from sample A4 / Example spliced isoformCATTTAATCACCTATTGCATCGCAATAAAAAGGTTGACTTTATTGAGCAGTTCAATGAGAAGCTTCTTGTAAAACAAGAAAATGAGAACCTACAAATACTTGATGTTCGGAATGCGCAATTGACTGAAGTAAGCAGGGCTGAGTTCCTGACCCCATCAGCTTTTATTTTTCTTTACGAGAATCAGTTATTCTTGACATTC
CGCAATCGTACAGTTGCTGTATGGAATTTCAGAGGAGAGCTGGTTACCTCATTTGAGGACCACTTGTTATGGCATCCTGATTGCAATACAAATAACATTTATATTACTAGTGATCAAGATTTGATAATTTCTTACTGCAAGGCACTTCCTCTTTCTGCTGGTGCAGAAGAAAACGTTGGTTCTATAAATATAAGTAACAT
ATTAACTGGAAAGTGCCTGGCTAAGATTCGTGCCAACGATCCAAATGTTCAGATTAGTCCTAGAAATCGTCCAAATGCGTCTACAATCAGAAGTACTGTAGAAGAAGCACTTGAAGACATCACTGCCTTATTCTACGATGAAGAGAGGAATGAAATATATACTGGCAATTCGCATGGCTTGGTTCATGTCTGGTCAAACT
GATTAATGGCTGTAACTTGTGCATATCCAGTCAACCATTCACTGCATTTGATGTCAAAATCTCAATCACTGGGCTGTAACCTGAAAGCAATGTTGCTAATTGTTCAAAGTGTTTGGATTATGCTGCTTGATAGCATTGAGCATTGATATGAAAGTTTTGTGCTACTTGATAGCACTGATATAGAAAGGAGCTCATGGCAC
CAGAATTCTAGTTATGAAAGTTTTGTGCTACTTGATAGCACTGATATAGAAAGGAGCGCACCAGAATTCTAGTTATGAAAGTTTTGTTTACAGTACAACCAACAAGCGTGTTTGATTGGTTACTGGTTGTCTGAGAATGTGACTCTATAGGTAATGCACAAATTGCAGAAAATTGCAATTGAGTTTAGCCTTCTGTAAAT
CTGTATTCTGAATTGTAATTGACCCTTATTACAGTGCAAGGGTCTCTAATTTAATATTTTCTTTATTTTTTGTAGCAGACTTGTTTTTCTCATGTGTCTAAAGCTCTAACGAAGATTGGATTCAATCTTAAGGATCCATAAATATTTGGAAAAAGCAAGTCTCTGCAATGCTAAAGATACATGCAATTGATTTATTCCTT
TTACTTTACAAGGGCATTAACTATTAAATGGATATCTATTACGTCGT
>TRINITY_DN95032_c0_g1_i1 from sample A4 / Example unspliced isoform:CATTTAATCACCTATTGCATCGCAATAAAAAGGTTGACTTTATTGAGCAGTTCAATGAGAAGCTTCTTGTAAAACAAGAAAATGAGAACCTACAAATACTTGATGTTCGGAATGCGCAATTGACTGAAGTAAGCAGGGCTGAGTTCCTGACCCCATCAGCTTTTATTTTTCTTTACGAGAATCAGTTATTCTTGACATTC
CGCAATCGTACAGTTGCTGTATGGAATTTCAGAGGAGAGCTGGTTACCTCATTTGAGGACCACTTGTTATGGCATCCTGATTGCAATACAAATAACATTTATATTACTAGTGATCAAGATTTGATAATTTCTTACTGCAAGGCACTTCCTCTTTCTGCTGGTGCAGAAGAAAACGgtaagacagcctaggctttgacttt
gttgtttaattacacaggttgtaaaatttctattgctgaaaagacttagattcttgttgcaatccttatttttctttccatataattgactgggatgtacgtgggagtttgcagTTGGTTCTATAAATATAAGTAACATATTAACTGGAAAGTGCCTGGCTAAGATTCGTGCCAACGATCCAAATGTTCAGATTAGTCCT
AGAAATCGTCCAAATGCGTCTACAATCAGAAGTACTGTAGAAGAAGCACTTGAAGACATCACTGCCTTATTCTACGATGAAGAGAGGAATGAAATATATACTGGCAATTCGCATGGCTTGGTTCATGTCTGGTCAAACTGATTAATGGCTGTAACTTGTGCATATCCAGTCAACCATTCACTGCATTTGATGTCAAAATC
TCAATCACTGGGCTGTAACCTGAAAGCAATGTTGCTAATTGTTCAAAGTGTTTGGATTATGCTGCTTGATAGCATTGAGCATTGATATGAAAGTTTTGTGCTACTTGATAGCACTGATATAGAAAGGAGCTCATGGCACCAGAATTCTAGTTATGAAAGTTTTGTGCTACTTGATAGCACTGATATAGAAAGGAGCGCAC
CAGAATTCTAGTTATGAAAGTTTTGTTTACAGTACAACCAACAAGCGTGTTTGATTGGTTACTGGTTGTCTGAGAATGTGACTCTATAGGTAATGCACAAATTGCAGAAAATTGCAATTGAGTTTAGCCTTCTGTAAATCTGTATTCTGAATTGTAATTGACCCTTATTACAGTGCAAGGGTCTCTAATTTAATATTTTC
TTTATTTTTTGTAGCAGACTTGTTTTTCTCATGTGTCTAAAGCTCTAACGAAGATTGGATTCAATCTTAAGGATCCATAAATATTTGGAAAAAGCAAGTCTCTGCAATGCTAAAGATACATGCAATTGATTTATTCCTTTTACTTTACAAGGGCATTAACTATTAAATGGATATCTATTACGTCGT