sp|Q6YXZ7|ANM5_ORYSJ ----> Protein arginine N-methyltransferase 5
Intron 1 GTATATTAGG ... CATTTTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 34.15 | 27 | 14 | 0 |
| A2 | 35 | 26 | 14 | 8 |
| A3 | 17.65 | 14 | 3 | 1 |
| A4 | 21.43 | 11 | 3 | 0 |
| A5 | 40 | 6 | 4 | 4 |
| A6 | 37.04 | 34 | 20 | 0 |
| A7 | 25.42 | 44 | 15 | 0 |
| A8 | 33.33 | 18 | 9 | 0 |
| A9 | 26.67 | 33 | 12 | 0 |
| A10 | 20 | 28 | 7 | 0 |
>TRINITY_DN113571_c0_g1_i2 from sample A2 / Example spliced isoformGTAGTTTCTGATGTCCGTCAGTTGACGTTTTTGTTGTGAATCTACGAGAACCCAAAACCCTAGGAACAGCAAGGGTTTATGCGGAAGCAAGGGCGGTTAGTGAGACAAAAGCCGAGTATATCAGCGTGCTGAGCTAACAATTTGTGCAGAATTGAGGTATTTCCGAAGTTTGTATTAAAGTCAAAATGCCGCTGGGACAG
AGGGTGGGCGATAAGAGCGACTCACGTTATTGCGGAGTTGAGACAACATTTAGCGACGACGTGACGAACACCCTCAGAGATAACCTCGGCAATGGCTTTGATTTTGTATTAATGCCGCTGGGAAAGTAAGTTCTTGGATTGACTTAGATTCTGATGATGAGGTACTCCGGATGGATTCTGAAACTGTGTTGAAACAAGAA
ATAGCGTGGGCCTCTCACCTCTCATTACAGGCCTGTCTTTTGCCAACCCCTCAGGGATGTTCCTGTGCTAATTATGCTCGGTGTGTCAATCAAATTTTGCAAGGTTTGAATAACATGCAGTTGTGGCTAAGGATACCTCTAGTTAGTCCTGAAATTGAAGATTCAGAGTGCTCCCCAGATGGCAGTGACACATTTCTGAA
AAGCGATCCCGTACGTAGGAAACAGCAATTCGATGATTCATGGGAGCTGTGGAATACATTTCGTTTATTATGCGAACACCACAGTCAATTGTCCATAGCCCTGGATATATTGAGTTCTTTACCTTCTGTAAATTCACTGGGCCGTTGGAGTGGAGAGCCCATGAGAGCAGCTATCGTCCACACCAATGCTTTTTTAACCA
ATGCACGTGGATATCCTTGCCTATCAAAGCGCCACCAAAAACTAGTTACGACTTGTTTCAATTACTCTGTACAGGTAGTGATTTCTGGAGCACCCCTGCATCATGTTGCTGCAAGGAGTATTGAAAAGCCCGAAGAGAATAATAATCATGACATTGATGAAGATGGTCAAATACCAAAGGACCACCTGAAGCCGTACTTA
GACTACATTGGATTTCTTTACCAACGTCTAGAGCCTCCCTCTGAGCAGGAGCGGTTTGAGCTGGGCTACAGGGACTTCTTACAAGCTCCATTGCAGCCTCTTATGGATAATCTAGAGGCTCAAACTTATGAAACATTTGAGAAAGATACCATGAAGTATGCTCAGTATAAGAAAGCAGTTCATGCGGCCTTACTTGATCG
TATACCTGAGGAGAAAGCATCAACAACTATTGCTGTACTTATGGTTGTAGGAGCTGGGCGGGGACCTCTAGTAAGGGCTTCATTGCAGGCTGCAGAAGAATCAGGAAGAAAAATAAGAGTTTATGCTGTAGAGAAGAACCCCAATGCAGTAGTTACACTCCATAGCTTGATAAAACTGGAGGGTTGGGAAGGTATTGTGA
CTGTTGTGTCTGGTGACATGCGACAGTGGGTTGCACCAGAAAAGGCTGATATTCTGGTAAGCGAGCTGCTTGGTTCATTTGGTGATAATGAACTTTCCCCCGAGTGCTTAGATGGGGCACAAAGATTTTTGAAAGAAGATGGCATCTCCATTCCATCATCGTACACAAGTTTTATTGAGCCAATCACAGCATCAAAACTT
CACAATGATGTCAAATCTCATAAAGACATTGCACATTTTGAAACCGCTTATGTTGTAAAGCTTCACAGTATAGCAAGACTAGCTCCACCACAACCTGTTTTCACATTTACGCATCCTAACATTTCTCCCAAAAGAGACAATCGCCGTTATAAGAAGTTGCCCTTTGAGCTTCCTGCCGATACTGGATCAGCACTAGTCCA
TGGTTTTGCTGGATACTTTGATGCTACACTATATAAAGATATTCATCTTGGTATTGAACCTTCTACAGCAACACCTAACATGTTTAGCTGGTTTGCAATTTTCTTCCCACTTCGGAAACCCATTTATTTGCCAGCTGGTTCAATCTTGGATGTCCATTTCTGGCGTTGTATAGGTGCTGCCAAGGTTTGGTACGAATGGT
CTGTCACCTCTCCATCAGTTTCACCTATTCACAATTGTGGTGGTAGATCATATTGGGTTGGTCTATAATTAGAAAATAGAATGGTGTGGGTATACACCATTTTCTATTGTATTTTTAACTTCATTTTGATTTGTTCCAATTGTCTTGTATCTGTCCTCCTAAGCTGGATAGATATTATTTTATTTTCTTTATTGAAATTT
ATGCCATATTGTCTGGTTATGGGGGCACTAAGCTCATGGTTACAAGTTAAATCTCAATGGCTGGCTTTCTATGGTAGACAATAACTAAAAAAAATTAAGTTAGAATGGAAAGATGGGCCTTTTCTCTTAAGTTTCCACAGTCTACATGGCCACATTTCTACTGAAAACTAATAGGAGAGTGTCAGTACTGCTTGATCTGT
ATAGTTAGTTGATTGAACAGATTTTTGGGAGTTCAAACTTCAACCAGTGTCGAAGTAGGACGCGTCTGTGTTTCCAGTTGGACATGATTTTTTTTTTTAGTTAAATGAAACATTAGTGTCCATGGTCTTGGACTTTTACTCTTAGATGTCAACATCTTGTGTACCCCCTTGTGCTTGTGATGCGGGATAATCTTCAAGCA
TGCATAT
>TRINITY_DN113571_c0_g1_i9 from sample A2 / Example unspliced isoform:GTAGTTTCTGATGTCCGTCAGTTGACGTTTTTGTTGTGAATCTACGAGAACCCAAAACCCTAGGAACAGCAAGGGTTTATGCGGAAGCAAGGGCGGTTAGTGAGACAAAAGCCGAGTATATCAGCGTGCTGAGCTAACAATTTGTGCAGAATTGAGGTATTTCCGAAGTTTGTATTAAAGTCAAAATGCCGCTGGGACAG
AGGGTGGGCGATAAGAGCGACTCACGTTATTGCGGAGTTGAGACAACATTTAGCGACGACGTGACGAACACCCTCAGAGATAACCTCGGCAATGGCTTTGATTTTGTATTAATGCCGCTGGGAAAGTAAGTTCTTGGATTGACTTAGATTCTGATGATGAGGTACTCCGGATGGATTCTGAAACTGTGTTGAAACAAGAA
ATAGCGTGGGCCTCTCACCTCTCATTACAGGCCTGTCTTTTGCCAACCCCTCAGGGATGTTCCTGTGCTAATTATGCTCGGTGTGTCAATCAAATTTTGCAAGGTTTGAATAACATGCAGTTGTGGCTAAGGATACCTCTAGTTAGTCCTGAAATTGAAGATTCAGAGTGCTCCCCAGATGGCAGTGACACATTTCTGAA
AAGCGATCCCGTACGTAGGAAACAGCAATTCGATGATTCATGGGAGCTGTGGAATACATTTCGTTTATTATGCGAACACCACAGTCAATTGTCCATAGCCCTGGATATATTGAGTTCTTTACCTTCTGTAAATTCACTGGGCCGTTGGAGTGGAGAGCCCATGAGAGCAGCTATCGTCCACACCAATGCTTTTTTAACCA
ATGCACGTGGATATCCTTGCCTATCAAAGCGCCACCAAAAACTAGTTACGACTTGTTTCAATTACTCTGTACAGGTAGTGATTTCTGGAGCACCCCTGCATCATGTTGCTGCAAGGAGTATTGAAAAGCCCGAAGAGAATAATAATCATGACATTGATGAAGATGGTCAAATACCAAAGGACCACCTGAAGCCGTACTTA
GACTACATTGGATTTCTTTACCAACGTCTAGAGCCTCCCTCTGAGCAGGAGCGGTTTGAGgtatattaggatcaattttgggacacttgggaaggttttcttttttaacttttaaacctttttggtatagtgcttatttacaagtttacttacattttgtagcgtacttctaaataactagtattgttaattataatcca
tttttcagCTGGGCTACAGGGACTTCTTACAAGCTCCATTGCAGGTGAGAAACGATACTTGTCGTGAGAATAAAAGCTAGTAAATATATTTAAAGTTACATTTGTTGTTCTTGTTTATTTCTTGTTAGTTTTGATTTTGTTTTGTATTAACACTGAGTTGACTGTTGCTTCT
Intron 2 GTTCAGTTTC ... TAAAATTAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 6.92 | 15.3 | 2.4 | 1.2 |
| A2 | 11.24 | 14.4 | 1.8 | 1.9 |
| A3 | 26.67 | 11 | 0.6 | 4 |
| A4 | 20.35 | 11 | 1.8 | 3.1 |
| A5 | 55 | 0.5 | 0 | 0.7 |
| A6 | 16.09 | 33.3 | 0.6 | 6.4 |
| A7 | 16.99 | 31.3 | 2.4 | 6.4 |
| A8 | 23.84 | 22.9 | 3 | 7.2 |
| A9 | 19.49 | 24.8 | 0 | 6 |
| A10 | 17.42 | 16 | 0 | 3.4 |
>TRINITY_DN41704_c0_g1_i2 from sample A8 / Example spliced isoformGGGAAATTATTGCTGATTTGTTTCAGACATTTTGGTAGATCTCATTTTGGAACTTGTCATTCATTTTTTTCATGTTTTATTGATCCTTGTGCAGTATAAGAAAGCAGTTCATGCGGCCTTACTTGATCGTATACCTGAGGAGAAAGCATCAACAACTATTGCTGTACTTATGGTTGTAGGAGCTGGGCGGGGACCTCTAG
TAAGGGCTTCATTGCAGGCTGCAGAAGAATCAGGAAGAAAAATAAGAGTTTATGCTGTAGAGAAGAACCCCAATGCAGTAGTTACACTCCATGTAAGTCACTTCCTGGAAAACAAAGCATATAGAAGCAGTCACAGTTGCATCAGTTACTTCCATGGAGAAGTTAAGTTTTGATGAAATACTTTGGTCATTTCTAAGCCA
GCTTTTTAAAAGAGATGCATTGACTGTGGTCACCATTATGTTCCAATGGTAGGATTCTTTGATAGTTTGGAAATTCACCTGTTCTCCCTGTCACGTGAGCCAAATGATGAATAGTTCATTCCTTGTTATGGTATCTAGGATGTTATTTGGATTTAAGGTACAGTTTTTGGTTTTATTGCAATTTAAAAATTTTGAAACCT
TT
>TRINITY_DN41704_c0_g1_i7 from sample A8 / Example unspliced isoform:GGGAAATTATTGCTGATTTGTTTCAGACATTTTGGTAGATCTCATTTTGGAACTTGTCATTCATTTTTTTCATGTTTTATTGATCCTTGTGCAGTATAAGAAAGCAGTTCATGCGGCCTTACTTGATCGTATACCTGAGGAGAAAGCATCAACAACTATTGCTGTACTTATGGTTGTAGGAGCTGGGCGGGGACCTCTAG
TAAGGGCTTCATTGCAGgttcagtttcaaaaaccggttccctaaaattaagGCTGCAGAAGAATCAGGAAGAAAAATAAGAGTTTATGCTGTAGAGAAGAACCCCAATGCAGTAGTTACACTCCATAGCTTGATAAAACTGGAGGGTTGGGAAGGTATTGTGACTGTTGTGTCTAGTGACATGCGACAGTGGGTTGCACC
AGAAAAGGCTGATATTCTGGTAAGCGAGCTGCTTGGTTCATTTGGTGATAATGAACTTTCCCCCGAGTGCTTAGATGGGGCACAAAGATTTTTGAAAGAAGATGGCATCTCCATTCCATCATCGTACACAAGTTTTATTGAGCCAATCACAGCATCAAAACTTCACAATGATGTCAAATCTCATAAAGACATTGCACATT
TTGAAACCGCTTATGTTGTAAAGCTTCACAGTATAGCAAGACTAGCTCCACCACAACCTGTTTTCACATTTACGCATCCTAACATTTCTCCCAAAAGAGACAATCGCCGTTATAAGAAGTTGCCCTTTGAGCTTCCTGCCGATACTGGATCAGCACTAGTCCATGGTTTTGCTGGATACTTTGATGCTACACTATATAAA
GATATTCATCTTGGTATTGAACCTTCTACAGCAACACCTAACATGTTTAGCTGGTTTGCAATTTTCTTCCCACTTCGGAAACCCATTTATTTGCCAGCTGGTTCAATCTTGGATGTCCATTTCTGGCGTTGTATAGGTGCTGCCAAGGTTTGGTACGAATGGTCTGTCACCTCTCCATCAGTTTCACCTATTCACAATTG
TGGTGGTAGATCATATTGGGTTGGTCTATAATTAGAAAATAGAATGGTGTGGGTATACACCATTTTCTATTGTATTTTTAACTTCATTTTGATTTGTTCCAATTGTCTTGTATCTGTCCTCCTAAGCTGGATAGATATTATTTTATTTTCTTTATTGAAATTTATGCCATATTGTCTGGTTATGGGGGCACTAAGCTCAT
GGTTACAAGTTAAATCTCAATGGCTGGCTTTCTATGGTAGACAATAACTAAAATTTTTGAAGTTAGAATGGAATGATGGGCCTTTTCTCTGAAGTTTCCACAGTCTACATGGCCACATTTCTACTGAAAACTAATAGGAGAGTGTCAGTACTGCTTGATCTGTATAGTTAGTTGATTGAACAGATTTTCGGGAGTTCAAA
CTTCAACCAGTGTCGAAGTAGGACGCGTCTGTGTTTCCAGTTGGACATGATTTTTTTTTTTAGTTAAATGAAACATTAGTGTCCATGGTCTTGGACTTTTACTCTTAGATGTCAACATCTTGTGTACCCCCTTGTGCTTGTGATGCGGGATAATCTTCAAGCATGCATATTGCATTGAAGACTTGATTTAAGTGGGCAAT
TCTCTCTTTCCATGCATTTTCGGTCATTTGCAAGTAGTGCACTTGCATCTTGACTGACACTGTACTCTCAAATTAATGTCTTTTACTGCCTTAGTAGTGTTTCATGATTCATCCGGTCTTGTCTTATGTAAGACTTGAACTTGCATATAAGACCATGGAGGTTAGCTATCATGGCCATTAGCTGTAAAGTTGAGACTTTC
ATATCTAACTATTAATTTTCAGATATGGACCAATCCTTTGTCACTAGGGTTGGTTAACTGCTTTCTCACCTCTATCTGGCCTTTTAATTCCCAATTCATC
Intron 3 GTAAGTTATC ... TTGAGTACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 27.5 | 29 | 11 | 6 |
| A2 | 7.14 | 13 | 1 | 1 |
| A3 | 8 | 23 | 2 | 1 |
| A4 | 19.23 | 21 | 5 | 3 |
| A5 | 22.22 | 7 | 2 | 1 |
| A6 | 24.39 | 31 | 10 | 0 |
| A7 | 22.58 | 24 | 7 | 0 |
| A8 | 20.93 | 34 | 9 | 0 |
| A9 | 8.11 | 34 | 3 | 0 |
| A10 | 6.67 | 28 | 2 | 0 |
>TRINITY_DN124766_c0_g1_i8 from sample A1 / Example spliced isoformATTGATTTTGGTGCTATATATTGTCAGTTTGTAATTGTTTTGTTTGAACTGTAAGGATTCGTTAGATTCATTGTTTACAAATAAACGTGCTTTTTCTATCATTGTAGTTGTGGCTAAGGATACCTCTAGTTAGTCCTGAAATTGAAGATTCAGAGTGCTCCCCAGATGGCAGTGACACATTTCTGAAAAGCGATCCCGTA
CGTAGGAAACAGCAATTCGATGATTCATGGGAGCTGTGGAATACATTTCGTTTATTATGCGAACACCACAGTCAATTGTCCATAGCCCTGGATATATTGAGTTCTTTTCCTTCTGTAAATTCACTGGGCCGTTGGAGTGGAGAGCCCATGAGAGCAGCTATCGTCCACACCAATGCTTTTTTAACCAATGCACGTGGATA
TCCTTGCCTATCAAAGCGCCACCAAAAACTAGTTACGACTTGTTTCAATTACTCTGTACAGGTAGTGATTTCTGGAGCACCCCTGCATCATGTTGCTGCAAGGAGTGTTGAAAAGCCCGAAGAGAACAATAATCATGACATTGATGAAGATGGTCAAATACCAAAGGACCACCTGAAGCCGTACTTAGACTACATTGGAT
TTCTTTACCAACGTCTAGAGCCTCCCTCTGAGCAGGAGCGGTTTGAGCTGGGCTACAGGGACTTCTTACAAGCTCCATTGCAGCCTCTTATGGATAATCTAGAGGCTCAAACTTATGAAACATTTGAGAAAGATACCATGAAGTATGCTCAGTATAAGAAAGCAGTTCATGCGGCCTTACTTGATCGTATACCTGAGGAG
AAAGCATCAACAACTATTGCTGTACTTATGGTTGTAGGAGCTGGGCGGGGACCTCTAGTAAGGGCTTCATTGCAGGCTGCAGAAGAATCAGGAAGAAAAATAAGAGTTTATGCTGTAGAGAAGAACCCCAATGCAGTAGTTACACTCCATAGCTTGATAAAACTGGAGGGTTGGGAAGGTATTGTGACTGTTGTGTCTGG
TGACATGCGACAGTGGGTTGCACCAGAAAAGGCTGATATTCTGGTAAGCGAGCTGCTTGGTTCATTTGGTGATAATGAACTTTCCCCCGAGTGCTTAGATGGGGCACAAAGATTTTTGAAAGAAGATGGCATCTCCATTCCATCATCGTACACAAGTTTTATTGAGCCAATCACAGCATCAAAACTTCACAATGATGTCA
AATCTCATAAAGACATTGCACATTTTGAAACCGCTTATGTTGTAAAGCTTCACAGTATAGCAAGACTAGCTCCACCACAACCTGTTTTCACATTTACTCATCCTAACATTTCTCCCAAAAGAGACAATCGCCGTTATAAGAAGTTGCCCTTTGAGCTTCCTGCCGATACTGGATCAGCACTAGTCCATGGTTTTGCTGGA
TACTTTGATGCTACACTATATAAAGATATTCATCTTGGTATTGAACCTTCTACAGCAACACCTAACATGTTTAGCTGGTTTGCAATTTTCTTCCCACTTCGGAAACCCATTTATTTGCCAGCTGGTTCAATCTTGGATGTCCATTTCTGGCGTTGTATAGGTGCTGCCAAGGTTTGGTACGAATGGTCTGTCACCTCTCC
ATCAGTTTCACCTATTCACAATTGTGGTGGTAGATCATATTGGGTTGGTCTATAATTAGAAAATAGAATGGTGTGGGTATACACCATTTTCTATTGTATTTTTAACTTCATTTTGATTTGTTCCAATTGTCTTGTATCTGTCCTCCTAAGCTGGATAGATATTATTTTATTTTCTTTATTGAAATTTATGCCATATTGTC
TGGTTATGTGGGCACTAAGCTCATGGTTACAAGTTAAATCTCAATGGCTGG
>TRINITY_DN124766_c0_g1_i7 from sample A1 / Example unspliced isoform:AGTTGTGGCTAAGGATACCTCTAGTTAGTCCTGAAATTGAAGATTCAGAGTGCTCCCCAGATGGCAGTGACACATTTCTGAAAAGCGATCCCGTACGTAGGAAACAGCAATTCGATGATTCATGGGAGCTGTGGAATACATTTCGTTTATTATGCGAACACCACAGTCAATTGTCCATAGCCCTGGATATATTGAGTTCT
TTTCCTTCTGTAAATTCACTGGGCCGTTGGAGTGGAGAGCCCATGAGAGCAGCTATCGTCCACACCAATgtaagttatctcgaggatgccaagtttgtggccttgctacgtgtacaggtcttgcttaatattttattttttgagtacagGCTTTTTTAACCAATGCACGTGGATATCCTTGCCTATCAAAGCGCCACCAA
AAACTAGTTACGACTTGTTTCAATTACTCTGTACAGGTAGGTAAATGATCCTATATAGTAAATGTTCTTCAATATATTTTCAAATTTATGTCAATCTTCTTATCAATGATGTTGATATGTCAAAG