sp|Q9FLI5|OMA1_ARATH ----> Mitochondrial metalloendopeptidase OMA1
Intron 1 GTATGCCAGA ... AGATGTTGAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 48.15 | 7 | 10 | 3 |
| A2 | 46.67 | 8 | 10 | 4 |
| A3 | 50 | 6 | 11 | 1 |
| A4 | 50 | 2 | 3 | 1 |
| A5 | 100 | 0 | 0 | 1 |
| A6 | 52.69 | 22 | 39 | 10 |
| A7 | 53.85 | 21 | 31 | 18 |
| A8 | 55.77 | 23 | 37 | 21 |
| A9 | 43.55 | 35 | 39 | 15 |
| A10 | 67.74 | 5 | 17 | 4 |
>TRINITY_DN42365_c0_g1_i5 from sample A8 / Example spliced isoformCACAACTCAATAGAAAAATCAGAATCATTGAAATTCAAACTATTGACAATTATTTAAAAATAACAAAACAGTTTCAGGAAAACACTAGAACGGTCAATCAGGCCTGTTGAAGAAAATGGCGCCACAAAATAAGGCACGCGTCGTGGCCAGATCACAAATTATTTCCACCGTAAGCTGGAGCATTTGAAGTTTCATCTCAG
CATCTACAACGGTGCCAGATTATTACGGGTACGCCATGGCAGCATCCAATGCAGCGCCTGCATAATGCCCTAGGGATTAGGGTTTATCGTTTGATGAAATCATTGCAGGGTTTGAATTGAAGAACTTCTGCAATTATTAATAATACACAATTGGCCATCGAGGGATCTAATTTTTTGAGTAGATATCCTAAACCGTAAAT
TTCATTCAAGGGCTTTCGATCTTTTGAAGCAACGGTTTTCGTTGAAGACTTTGAGACAATTTGTTATCAACCAGGGATTCTAATCGAGGAGAAACGAAATATTGGAATCATTTGCAAGGTTTTGGTTGTTTGTTTGGAATCGAGTCTTAATAAAAGAAGAAAGGAATTTTGGAGAATTACATCATACGCTTTTATAAGAT
AACGAAGGAAGTTGAAGCCTAAAGAAGAAGTGGCAGGCTTTGTATTTTGTGTGAATATAGTCTTGATGCGCATCTTTATCAATGGCCGTGCCTCATTACAGGAAAGATCTGAAACGGGCTTTTGATTTCGTGTGCAAGAGTGTTTCCACCATTAGCCGCTCGCCTCTCGGTTTAAATGCCAGAGCCACTCACGGCCATTC
AATTGAGTCATCAAAGAGTGGTAATTGTGTAAAATCGGGAGATTTTCAAAATCCCTCGCAGTATGTGAAAACCCTAGGTCGCAGGTATTATAGCACTGTAAATAAAGGTGAAAGGTCTGGTCCAGTGCAGTGCTGGAAGTATGGGGAACATCCTTCCAGTGCATTGAAGCAAACGTTAAGTAAAGAGGCGGGTAAATTCA
GCAAACCTTCTCTTTTGTTGATTGGGATTCAAGGAAGGAGAGCGATCAATCACTCCTTTGGGCCATACGGGACTCAAAATATATTGCAGGGAAAGCGATTCTATTATGTGGATAGGTATAATGTACAGCACTTTAGACCAAGAGGGCCACGGCGATGGATTGACAATCCACAGAAGCTTTTGGTTATCGTAGTTCTCAGC
TCAGGTCTGGTTATTTCTATTTATTTCTCAAATTTGGAAACCGTTCCGTATTCTCATCGCAAGCATTTCGTCTTGATATCCGATGAGATGGAAAAAAAGATCGGCGAAAACCAATTTGAGCAGATGAAAAAGACGTTCAAACCAAAGATTCTTCCTGCAATTCATCCACAAAGTGTGAGAGTGAGACTAATAGCCAAGGA
TATCATAGAAGCATTACAAAGGGGAACACGACACCAGGAAAGCGGGAGTGATGTTGTTTATAGTAATACAAAAACCATTCCGTCTGATGCTCATACTAGTCAGGATCCCTGGGGCTTAAGGAGCGAAAAAGAAAATAAAGAAGAACAGTTGTACAGCAATGATGAAATCCTAGATGACAAATGGGTTGAGAAGAGTCGTA
AGTCTGGAAAAGAGCGTGGGGACAAGGCATCAACTCAGCACTTGAGGGCATTTAATTGGGAAATTCTGGTGGTGGATGATCCAATTGTCAATGCATTTTGCCTACCCGGTGGGAAAATAATGGTTTTCACTGGATTGCTGAATGCATTTCCGTCTGATGCAGAGATTGCCACTGTTATCTCTCATGAGGTTGGACATGCT
GTGGCAAGGCATGCAGCAGAAGGCATGACGAGCAATTTGTGGTTTGCAATTTTACAAATCATTCTTCTTCAGTTCATTGGATGGAAGTTGAAGCAGATTACATAGGATTACTTTTGATGGCATCAGCTGGATATGATCCACGCGTGGCATCCTCTGTTTATGAGAAACTCGGAAAACTTTCTGGTGATTCAGTAATTCAA
AACTATTTGTCTACACATCCATCTGGAAAGAAAAGAGCGGAGCTTCTTAAACAAGCAAAGGTAATGGATGAAGCACTTGGGATTTACAGAGAGAGAATATCAGGGCATGGAATTGAAGGGTTTTTATGAGATTTTAACATGGTTTAGATATCGTACATTTGTAAATTAATCTGGACACCAATTTGTCTACCTTAAGGTTG
ATGCTTTACAGCAAAATTCACACTCAGCATACGGATTAAAGATGCGTAGTTGAAAAACCATTTGAAGTGTCCATTTAATGTGCTGTCCAGGAAACGTACGACTCTCACAGGAAGGATTGTACTAGCTTTGGTATTTGTAATAAAATTCTCATCTCTTCAAAATAAATTTTCTAAATGCTTTCATCTTGTTCCTTTCATTC
AATCTCAAGTGCACACTTAGTGCTATATATGAACGTACATTTCAAAATATGATCAATGAAGTCCAGCGATTATGCACTCTAATGCATATAGATTTGTTTCACACCAAGGTAATTTCATAGAACTGCTCCAGCCTTTATGGTATTGTTCGTACACCATTCAAATTTCATGTTCCTCTGTTCGGTTAAGCTTAGAAGCATGC
ATTTGGATTTGTGAAATATCAATGGCTCTGCTGTAAGTCACATGGTGTGTTTGTAAACAGAGAGAATAGTGGTTGTTGTGTTTTAATTGATCGATTGATGATTTATACCTTCCAAAAAGGGAAATCCCT
>TRINITY_DN42365_c0_g1_i2 from sample A8 / Example unspliced isoform:CACAACTCAATAGAAAAATCAGAATCATTGAAATTCAAACTATTGACAATTATTTAAAAATAACAAAACAGTTTCAGGAAAACACTAGAACGGTCAATCAGGCCTGTTGAAGAAAATGGCGCCACAAAATAAGGCACGCGTCGTGGCCAGATCACAAATTATTTCCACCGTAAGCTGGAGCATTTGAAGTTTCATCTCAG
CATCTACAACGGTGCCAGATTATTACGGGTACGCCATGGCAGCATCCAATGCAGCGCCTGCATAATGCCCTAGGGATTAGGGTTTATCGTTTGATGAAATCATTGCAGGGTTTGAATTGAAGAACTTCTGCAATTATTAATAATACACAATTGGCCATCGAGGGATCTAATTTTTTGAGTAGATATCCTAAACCGTAAAT
TTCATTCAAGGGCTTTCGATCTTTTGAAGCAACGGTTTTCGTTGAAGACTTTGAGACAATTTGTTATCAACCAGGGATTCTAATCGAGGAGAAACGAAATATTGGAATCATTTGCAAGGTTTTGGTTGTTTGTTTGGAATCGAGTCTTAATAAAAGAAGAAAGGAATTTTGGAGAATTACATCATACGCTTTTATAAGAT
AACGAAGGAAGTTGAAGCCTAAAGAAGAAGTGGCAGGCTTTGTATTTTGTGTGAATATAGTCTTGATGCGCATCTTTATCAATGGCCGTGCCTCATTACAGGAAAGATCTGAAACGGGCTTTTGATTTCGTGTGCAAGAGTGTTTCCACCATTAGCCGCTCGCCTCTCGGTTTAAATGCCAGAGCCACTCACGGCCATTC
AATTGAGTCATCAAAGAGTGGTAATTGTGTAAAATCGGGAGATTTTCAAAATCCCTCGCAGTATGTGAAAACCCTAGGTCGCAGGTATTATAGCACTGTAAATAAAGGTGAAAGGTCTGGTCCAGTGCAGTGCTGGAAGTATGGGGAACATCCTTCCAGTGCATTGAAGCAAACGTTAAGTAAAGAGGCGGGTAAATTCA
GCAAACCTTCTCTTTTGTTGATTGGGATTCAAGGAAGGAGAGCGATCAATCACTCCTTTGGGCCATACGGGACTCAAAATATATTGCAGGGAAAGCGATTCTATTATGTGGATAGGTATAATGTACAGCACTTTAGACCAAGAGGGCCACGGCGATGGATTGACAATCCACAGAAGCTTTTGGTTATCGTAGTTCTCAGC
TCAGGTCTGGTTATTTCTATTTATTTCTCAAATTTGGAAACCGTTCCGTATTCTCATCGCAAGCATTTCGTCTTGATATCCGATGAGATGGAAAAAAAGATCGGCGAAAACCAATTTGAGCAGATGAAAAAGACGTTCAAACCAAAGATTCTTCCTGCAATTCATCCACAAAGTGTGAGAGTGAGACTAATAGCCAAGGA
TATCATAGAAGCATTACAAAGGGGAACACGACACCAGGAAAGCGGGAGTGATGTTGTTTATAGTAATACAAAAACCATTCCGTCTGATGCTCATACTAGTCAGGATCCCTGGGGCTTAAGGAGCGAAAAAGAAAATAAAGAAGAACAGTTGTACAGCAATGATGAAATCCTAGATGACAAATGGGTTGAGAAGAGTCGTA
AGTCTGGAAAAGAGCGTGGGGACAAGGCATCAACTCAGCACTTGAGGGCATTTAATTGGGAAATTCTGGTGGTGGATGATCCAATTGTCAATGCATTTTGCCTACCCGGTGGGAAAATAATGGTTTTCACTGGATTGCTGAATGCATTTCCGTCTGATGCAGAGATTGCCACTGTTATCTCTCATGAGGTTGGACATGCT
GTGGCAAGGCATGCAGCAGAAGGCATGACGAGCAATTTGTGGTTTGCAATTTTACAAATCATTCTTCTTCAGTTCATTGgtatgccagatgttgtttatgcaatgtcaaatctacttttgaaacttcccttttcccgaagcattgtgagacatttcatggtgcatgaagaggacatttcagatcctatttcctttgatat
tggacagctagaagatgttgagGATGGAAGTTGAAGCAGATTACATAGGATTACTTTTGATGGCATCAGCTGGATATGATCCACGCGTGGCATCCTCTGTTTATGAGAAACTCGGAAAACTTTCTGGTGATTCAGTAATTCAAAACTATTTGTCTACACATCCATCTGGAAAGAAAAGAGCGGAGCTTCTTAAACAAGCA
AAGGTAATGGATGAAGCACTTGGGATTTACAGAGAGAGAATATCAGGGCATGGAATTGAAGGGTTTTTATGAGATTTTAACATGGTTTAGATATCGTACATTTGTAAATTAATCTGGACACCAATTTGTCTACCTTAAGGTTGATGCTTTACAGCAAAATTCACACTCAGCATACGGATTAAAGATGCGTAGTTGAAAAA
CCATTTGAAGTGTCCATTTAATGTGCTGTCCAGGAAACGTACGACTCTCACAGGAAGGATTGTACTAGCTTTGGTATTTGTAATAAAATTCTCATCTCTTCAAAATAAATTTTCTAAATGCTTTCATCTTGTTCCTTTCATTCAATCTCAAGTGCACACTTAGTGCTATATATGAACGTACATTTCAAAATATGATCAAT
GAAGTCCAGCGATTATGCACTCTAATGCATATAGATTTGTTTCACACCAAGGTAATTTCATAGAACTGCTCCAGCCTTTATGGTATTGTTCGTACACCATTCAAATTTCATGTTCCTCTGTTCGGTTAAGCTTAGAAGCATGCATTTGGATTTGTGAAATATCAATGGCTCTGCTGTAAGTCACATGGTGTGTTTGTAAA
CAGAGAGAATAGTGGTTGTTGTGTTTTAATTGATCGATTGATGATTTATACCTTCCAAAAAGGGAAATCCCT
Intron 2 GTATGCCAGA ... TTTCCCGAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 70 | 7 | 13.7 | 19 |
| A2 | 61.52 | 8 | 10.7 | 15 |
| A3 | 67.52 | 6 | 14 | 11 |
| A4 | 88.46 | 2 | 13.7 | 17 |
| A5 | 100 | 0 | 2 | 6 |
| A6 | 71.78 | 22 | 50 | 62 |
| A7 | 69.19 | 21 | 41.3 | 53 |
| A8 | 69.4 | 23 | 44.3 | 60 |
| A9 | 62.75 | 35 | 52 | 66 |
| A10 | 84.77 | 5 | 23.7 | 32 |
>TRINITY_DN42365_c0_g1_i5 from sample A8 / Example spliced isoformCACAACTCAATAGAAAAATCAGAATCATTGAAATTCAAACTATTGACAATTATTTAAAAATAACAAAACAGTTTCAGGAAAACACTAGAACGGTCAATCAGGCCTGTTGAAGAAAATGGCGCCACAAAATAAGGCACGCGTCGTGGCCAGATCACAAATTATTTCCACCGTAAGCTGGAGCATTTGAAGTTTCATCTCAG
CATCTACAACGGTGCCAGATTATTACGGGTACGCCATGGCAGCATCCAATGCAGCGCCTGCATAATGCCCTAGGGATTAGGGTTTATCGTTTGATGAAATCATTGCAGGGTTTGAATTGAAGAACTTCTGCAATTATTAATAATACACAATTGGCCATCGAGGGATCTAATTTTTTGAGTAGATATCCTAAACCGTAAAT
TTCATTCAAGGGCTTTCGATCTTTTGAAGCAACGGTTTTCGTTGAAGACTTTGAGACAATTTGTTATCAACCAGGGATTCTAATCGAGGAGAAACGAAATATTGGAATCATTTGCAAGGTTTTGGTTGTTTGTTTGGAATCGAGTCTTAATAAAAGAAGAAAGGAATTTTGGAGAATTACATCATACGCTTTTATAAGAT
AACGAAGGAAGTTGAAGCCTAAAGAAGAAGTGGCAGGCTTTGTATTTTGTGTGAATATAGTCTTGATGCGCATCTTTATCAATGGCCGTGCCTCATTACAGGAAAGATCTGAAACGGGCTTTTGATTTCGTGTGCAAGAGTGTTTCCACCATTAGCCGCTCGCCTCTCGGTTTAAATGCCAGAGCCACTCACGGCCATTC
AATTGAGTCATCAAAGAGTGGTAATTGTGTAAAATCGGGAGATTTTCAAAATCCCTCGCAGTATGTGAAAACCCTAGGTCGCAGGTATTATAGCACTGTAAATAAAGGTGAAAGGTCTGGTCCAGTGCAGTGCTGGAAGTATGGGGAACATCCTTCCAGTGCATTGAAGCAAACGTTAAGTAAAGAGGCGGGTAAATTCA
GCAAACCTTCTCTTTTGTTGATTGGGATTCAAGGAAGGAGAGCGATCAATCACTCCTTTGGGCCATACGGGACTCAAAATATATTGCAGGGAAAGCGATTCTATTATGTGGATAGGTATAATGTACAGCACTTTAGACCAAGAGGGCCACGGCGATGGATTGACAATCCACAGAAGCTTTTGGTTATCGTAGTTCTCAGC
TCAGGTCTGGTTATTTCTATTTATTTCTCAAATTTGGAAACCGTTCCGTATTCTCATCGCAAGCATTTCGTCTTGATATCCGATGAGATGGAAAAAAAGATCGGCGAAAACCAATTTGAGCAGATGAAAAAGACGTTCAAACCAAAGATTCTTCCTGCAATTCATCCACAAAGTGTGAGAGTGAGACTAATAGCCAAGGA
TATCATAGAAGCATTACAAAGGGGAACACGACACCAGGAAAGCGGGAGTGATGTTGTTTATAGTAATACAAAAACCATTCCGTCTGATGCTCATACTAGTCAGGATCCCTGGGGCTTAAGGAGCGAAAAAGAAAATAAAGAAGAACAGTTGTACAGCAATGATGAAATCCTAGATGACAAATGGGTTGAGAAGAGTCGTA
AGTCTGGAAAAGAGCGTGGGGACAAGGCATCAACTCAGCACTTGAGGGCATTTAATTGGGAAATTCTGGTGGTGGATGATCCAATTGTCAATGCATTTTGCCTACCCGGTGGGAAAATAATGGTTTTCACTGGATTGCTGAATGCATTTCCGTCTGATGCAGAGATTGCCACTGTTATCTCTCATGAGGTTGGACATGCT
GTGGCAAGGCATGCAGCAGAAGGCATGACGAGCAATTTGTGGTTTGCAATTTTACAAATCATTCTTCTTCAGTTCATTGGATGGAAGTTGAAGCAGATTACATAGGATTACTTTTGATGGCATCAGCTGGATATGATCCACGCGTGGCATCCTCTGTTTATGAGAAACTCGGAAAACTTTCTGGTGATTCAGTAATTCAA
AACTATTTGTCTACACATCCATCTGGAAAGAAAAGAGCGGAGCTTCTTAAACAAGCAAAGGTAATGGATGAAGCACTTGGGATTTACAGAGAGAGAATATCAGGGCATGGAATTGAAGGGTTTTTATGAGATTTTAACATGGTTTAGATATCGTACATTTGTAAATTAATCTGGACACCAATTTGTCTACCTTAAGGTTG
ATGCTTTACAGCAAAATTCACACTCAGCATACGGATTAAAGATGCGTAGTTGAAAAACCATTTGAAGTGTCCATTTAATGTGCTGTCCAGGAAACGTACGACTCTCACAGGAAGGATTGTACTAGCTTTGGTATTTGTAATAAAATTCTCATCTCTTCAAAATAAATTTTCTAAATGCTTTCATCTTGTTCCTTTCATTC
AATCTCAAGTGCACACTTAGTGCTATATATGAACGTACATTTCAAAATATGATCAATGAAGTCCAGCGATTATGCACTCTAATGCATATAGATTTGTTTCACACCAAGGTAATTTCATAGAACTGCTCCAGCCTTTATGGTATTGTTCGTACACCATTCAAATTTCATGTTCCTCTGTTCGGTTAAGCTTAGAAGCATGC
ATTTGGATTTGTGAAATATCAATGGCTCTGCTGTAAGTCACATGGTGTGTTTGTAAACAGAGAGAATAGTGGTTGTTGTGTTTTAATTGATCGATTGATGATTTATACCTTCCAAAAAGGGAAATCCCT
>TRINITY_DN42365_c0_g1_i1 from sample A8 / Example unspliced isoform:CACAACTCAATAGAAAAATCAGAATCATTGAAATTCAAACTATTGACAATTATTTAAAAATAACAAAACAGTTTCAGGAAAACACTAGAACGGTCAATCAGGCCTGTTGAAGAAAATGGCGCCACAAAATAAGGCACGCGTCGTGGCCAGATCACAAATTATTTCCACCGTAAGCTGGAGCATTTGAAGTTTCATCTCAG
CATCTACAACGGTGCCAGATTATTACGGGTACGCCATGGCAGCATCCAATGCAGCGCCTGCATAATGCCCTAGGGATTAGGGTTTATCGTTTGATGAAATCATTGCAGGGTTTGAATTGAAGAACTTCTGCAATTATTAATAATACACAATTGGCCATCGAGGGATCTAATTTTTTGAGTAGATATCCTAAACCGTAAAT
TTCATTCAAGGGCTTTCGATCTTTTGAAGCAACGGTTTTCGTTGAAGACTTTGAGACAATTTGTTATCAACCAGGGATTCTAATCGAGGAGAAACGAAATATTGGAATCATTTGCAAGGTTTTGGTTGTTTGTTTGGAATCGAGTCTTAATAAAAGAAGAAAGGAATTTTGGAGAATTACATCATACGCTTTTATAAGAT
AACGAAGGAAGTTGAAGCCTAAAGAAGAAGTGGCAGGCTTTGTATTTTGTGTGAATATAGTCTTGATGCGCATCTTTATCAATGGCCGTGCCTCATTACAGGAAAGATCTGAAACGGGCTTTTGATTTCGTGTGCAAGAGTGTTTCCACCATTAGCCGCTCGCCTCTCGGTTTAAATGCCAGAGCCACTCACGGCCATTC
AATTGAGTCATCAAAGAGTGGTAATTGTGTAAAATCGGGAGATTTTCAAAATCCCTCGCAGTATGTGAAAACCCTAGGTCGCAGGTATTATAGCACTGTAAATAAAGGTGAAAGGTCTGGTCCAGTGCAGTGCTGGAAGTATGGGGAACATCCTTCCAGTGCATTGAAGCAAACGTTAAGTAAAGAGGCGGGTAAATTCA
GCAAACCTTCTCTTTTGTTGATTGGGATTCAAGGAAGGAGAGCGATCAATCACTCCTTTGGGCCATACGGGACTCAAAATATATTGCAGGGAAAGCGATTCTATTATGTGGATAGGTATAATGTACAGCACTTTAGACCAAGAGGGCCACGGCGATGGATTGACAATCCACAGAAGCTTTTGGTTATCGTAGTTCTCAGC
TCAGGTCTGGTTATTTCTATTTATTTCTCAAATTTGGAAACCGTTCCGTATTCTCATCGCAAGCATTTCGTCTTGATATCCGATGAGATGGAAAAAAAGATCGGCGAAAACCAATTTGAGCAGATGAAAAAGACGTTCAAACCAAAGATTCTTCCTGCAATTCATCCACAAAGTGTGAGAGTGAGACTAATAGCCAAGGA
TATCATAGAAGCATTACAAAGGGGAACACGACACCAGGAAAGCGGGAGTGATGTTGTTTATAGTAATACAAAAACCATTCCGTCTGATGCTCATACTAGTCAGGATCCCTGGGGCTTAAGGAGCGAAAAAGAAAATAAAGAAGAACAGTTGTACAGCAATGATGAAATCCTAGATGACAAATGGGTTGAGAAGAGTCGTA
AGTCTGGAAAAGAGCGTGGGGACAAGGCATCAACTCAGCACTTGAGGGCATTTAATTGGGAAATTCTGGTGGTGGATGATCCAATTGTCAATGCATTTTGCCTACCCGGTGGGAAAATAATGGTTTTCACTGGATTGCTGAATGCATTTCCGTCTGATGCAGAGATTGCCACTGTTATCTCTCATGAGGTTGGACATGCT
GTGGCAAGGCATGCAGCAGAAGGCATGACGAGCAATTTGTGGTTTGCAATTTTACAAATCATTCTTCTTCAGTTCATTGgtatgccagatgttgtttatgcaatgtcaaatctacttttgaaacttcccttttcccgaagGATGGAAGTTGAAGCAGATTACATAGGATTACTTTTGATGGCATCAGCTGGATATGATCC
ACGCGTGGCATCCTCTGTTTATGAGAAACTCGGAAAACTTTCTGGTGATTCAGTAATTCAAAACTATTTGTCTACACATCCATCTGGAAAGAAAAGAGCGGAGCTTCTTAAACAAGCAAAGGTAATGGATGAAGCACTTGGGATTTACAGAGAGAGAATATCAGGGCATGGAATTGAAGGGTTTTTATGAGATTTTAACA
TGGTTTAGATATCGTACATTTGTAAATTAATCTGGACACCAATTTGTCTACCTTAAGGTTGATGCTTTACAGCAAAATTCACACTCAGCATACGGATTAAAGATGCGTAGTTGAAAAACCATTTGAAGTGTCCATTTAATGTGCTGTCCAGGAAACGTACGACTCTCACAGGAAGGATTGTACTAGCTTTGGTATTTGTA
ATAAAATTCTCATCTCTTCAAAATAAATTTTCTAAATGCTTTCATCTTGTTCCTTTCATTCAATCTCAAGTGCACACTTAGTGCTATATATGAACGTACATTTCAAAATATGATCAATGAAGTCCAGCGATTATGCACTCTAATGCATATAGATTTGTTTCACACCAAGGTAATTTCATAGAACTGCTCCAGCCTTTATG
GTATTGTTCGTACACCATTCAAATTTCATGTTCCTCTGTTCGGTTAAGCTTAGAAGCATGCATTTGGATTTGTGAAATATCAATGGCTCTGCTGTAAGTCACATGGTGTGTTTGTAAACAGAGAGAATAGTGGTTGTTGTGTTTTAATTGATCGATTGATGATTTATACCTTCCAAAAAGGGAAATCCCT
Intron 3 GTAATGGATG ... TGCTGTCCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 70.83 | 14 | 35 | 33 |
| A2 | 89.47 | 2 | 10 | 24 |
| A3 | 94.12 | 1 | 3 | 29 |
| A4 | 65.52 | 5 | 14 | 5 |
| A5 | 100 | 0 | 3 | 6 |
| A6 | 80.8 | 27 | 72.3 | 155 |
| A7 | 82.35 | 24 | 87 | 137 |
| A8 | 82.11 | 28 | 105 | 152 |
| A9 | 74.41 | 38 | 79 | 142 |
| A10 | 79.02 | 15 | 55 | 58 |
>TRINITY_DN41020_c0_g2_i1 from sample A9 / Example spliced isoformGGAAAACACTAGAACGGTCAATCAGGCCTGTTGAAGAAAATGGCGCCACAAAATAAGGCACGCGTCGTGGCCAGATCACAAATTATTTCCACCGTAAGCTGGAGCATTTGAAGTTTCATCTCAGCATCTACAACGGTGCCAGATTATTACGGGTACGCCATGGCAGCATCCAATGCAGCGCCTGCATAATGCCCTAGGGA
TTAGGGTTTATCGTTTGATGAAATCATTGCAGGGTTTGAATTGAAGAACTTCTGCAATTATTAATAATACACAATTGGCCATCGAGGGATCTAATTTTTTGAGTAGATATCCTAAACCGTAAATTTCATTCAAGGGCTTTCGATCTTTTGAAGCAACGGTTTTCGTTGAAGACTTTGAGACAATTTGTTATCAACCAGGG
ATTCTAATCGAGGAGAAACGAAATATTGGAATCATTTGCAAGGTTTTGGTTGTTTGTTTGGAATCGAGTCTTAATAAAAGAAGAAAGGAATTTTGGAGAATTACATCATACGCTTTTATAAGATAACGAAGGAAGTTGAAGCCTAAAGAAGAAGTGGCAGGCTTTGTATTTTGTGTGAATATAGTCTTGATGCGCATCTT
TATCAATGGCCGTGCCTCATTACAGGAAAGATCTGAAACGGGCTTTTGATTTCGTGTGCAAGAGTGTTTCCACCATTAGCCGCTCGCCTCTCGGTTTAAATGCCAGAGCCACTCACGGCCGTTCAATTGAGTCATCAAAGAGTGGTAATTGTGTAAAATCGGGAGATTTTCAAAATCCCTCGCAGTATGTGAAAACCCTA
GGTCGCAGGTATTATAGCACTGTAAATAAAGGTGAAAGGTCTGGTCCAGTGCAGTGCTGGAAGTATGGGGAACATCCTTCCAGTGCATTGAAGCAAACGTTAAGTAAAGAGGCGGGTAAATTCAGCAAACCTTCTCTTTTGTTGATTGGGATTCAAGGAAGGAGAGCGATCAATCACTCCTTTGGGCCATACGGGACTCA
AAATATATTGCAGGGAAAGCGATTCTATTATGTGGATAGGTATAATGTACAGCACTTTAGACCAAGAGGGCCACGGCGATGGATTGACAATCCACAGAAGCTTTTGGTTATCGTAGTTCTCAGCTCAGGTCTGGTTATTTCTATTTATTTCTCAAATTTGGAAACCGTTCCGTATTCTCATCGCAAGCATTTCGTCTTGA
TATCCGATGAGATGGAAAAAAAGATCGGCGAAAACCAATTTGAGCAGTTGAAAAAGACGTTCAAACCAAAGATTCTTCCAGCAATTCATCCACAAAGTGTGAGAGTGAGACTAATAGCCAAGGATATCATAGAAGCATTACAAAGGGGAACACGACACCAGGAAAGCGGGAGTGATGTTGTTTATAGTAATACAAAAACC
ATTCCGTCTGGTGCTCATACTAGTCAGGATCCCTGGGGCTTAAGGAGCGAAAAAGAAAATAAAGAAGAACAGTTGTACAGCAATGATGAAATCCTAGATGACAAATGGGTTGAGAAGAGTCGTAAGTCTGGAAAAGAGCGTGGGGACAAGGCATCAACTCAGCACTTGAGGGCATTTAATTGGGAAATTCTGGTGGTGGA
TGATCCAATTGTCAATGCATTTTGCCTACCCGGTGGGAAAATAATGGTTTTCACTGGATTGCTGAATGCATTTCCGTCTGATGCAGAGATTGCCACTGTTATCTCTCATGAGGTTGGACATGCTGTGGCAAGGCATGCAGCAGAAGGCATGACGAGCAATTTGTGGTTTGCAATTTTACAAATCATTCTTCTTCAGTTCA
TTGGTATGCCAGATGTTGTTTATGCAATGTCAAATCTACTTTTGAAACTTCCCTTTTCCCGAAGGATGGAAGTTGAAGCAGATTACATAGGATTACTTTTGATGGCATCAGCTGGATATGATCCACGCGTGGCATCCTCTGTTTATGAGAAACTCGGAAAACTTTCTGGTGATTCAGTAATTCAAAACTATTTGTCTACA
CATCCATCTGGAAAGAAAAGAGCGGAGCTTCTTAAACAAGCAAAGGAAACGTACGACTCTCACAGGAAGGATTGTACTAGCTTTGGTATTTGTAATAAAATTCTCATCTCTTCAAAATAAATTTTCTAAATGCTTTCATCTTGTTCCTTTCATTCAATCTCAAGTGCACA
>TRINITY_DN41020_c0_g2_i4 from sample A9 / Example unspliced isoform:GGAAAACACTAGAACGGTCAATCAGGCCTGTTGAAGAAAATGGCGCCACAAAATAAGGCACGCGTCGTGGCCAGATCACAAATTATTTCCACCGTAAGCTGGAGCATTTGAAGTTTCATCTCAGCATCTACAACGGTGCCAGATTATTACGGGTACGCCATGGCAGCATCCAATGCAGCGCCTGCATAATGCCCTAGGGA
TTAGGGTTTATCGTTTGATGAAATCATTGCAGGGTTTGAATTGAAGAACTTCTGCAATTATTAATAATACACAATTGGCCATCGAGGGATCTAATTTTTTGAGTAGATATCCTAAACCGTAAATTTCATTCAAGGGCTTTCGATCTTTTGAAGCAACGGTTTTCGTTGAAGACTTTGAGACAATTTGTTATCAACCAGGG
ATTCTAATCGAGGAGAAACGAAATATTGGAATCATTTGCAAGGTTTTGGTTGTTTGTTTGGAATCGAGTCTTAATAAAAGAAGAAAGGAATTTTGGAGAATTACATCATACGCTTTTATAAGATAACGAAGGAAGTTGAAGCCTAAAGAAGAAGTGGCAGGCTTTGTATTTTGTGTGAATATAGTCTTGATGCGCATCTT
TATCAATGGCCGTGCCTCATTACAGGAAAGATCTGAAACGGGCTTTTGATTTCGTGTGCAAGAGTGTTTCCACCATTAGCCGCTCGCCTCTCGGTTTAAATGCCAGAGCCACTCACGGCCGTTCAATTGAGTCATCAAAGAGTGGTAATTGTGTAAAATCGGGAGATTTTCAAAATCCCTCGCAGTATGTGAAAACCCTA
GGTCGCAGGTATTATAGCACTGTAAATAAAGGTGAAAGGTCTGGTCCAGTGCAGTGCTGGAAGTATGGGGAACATCCTTCCAGTGCATTGAAGCAAACGTTAAGTAAAGAGGCGGGTAAATTCAGCAAACCTTCTCTTTTGTTGATTGGGATTCAAGGAAGGAGAGCGATCAATCACTCCTTTGGGCCATACGGGACTCA
AAATATATTGCAGGGAAAGCGATTCTATTATGTGGATAGGTATAATGTACAGCACTTTAGACCAAGAGGGCCACGGCGATGGATTGACAATCCACAGAAGCTTTTGGTTATCGTAGTTCTCAGCTCAGGTCTGGTTATTTCTATTTATTTCTCAAATTTGGAAACCGTTCCGTATTCTCATCGCAAGCATTTCGTCTTGA
TATCCGATGAGATGGAAAAAAAGATCGGCGAAAACCAATTTGAGCAGTTGAAAAAGACGTTCAAACCAAAGATTCTTCCAGCAATTCATCCACAAAGTGTGAGAGTGAGACTAATAGCCAAGGATATCATAGAAGCATTACAAAGGGGAACACGACACCAGGAAAGCGGGAGTGATGTTGTTTATAGTAATACAAAAACC
ATTCCGTCTGGTGCTCATACTAGTCAGGATCCCTGGGGCTTAAGGAGCGAAAAAGAAAATAAAGAAGAACAGTTGTACAGCAATGATGAAATCCTAGATGACAAATGGGTTGAGAAGAGTCGTAAGTCTGGAAAAGAGCGTGGGGACAAGGCATCAACTCAGCACTTGAGGGCATTTAATTGGGAAATTCTGGTGGTGGA
TGATCCAATTGTCAATGCATTTTGCCTACCCGGTGGGAAAATAATGGTTTTCACTGGATTGCTGAATGCATTTCCGTCTGATGCAGAGATTGCCACTGTTATCTCTCATGAGGATGGAAGTTGAAGCAGATTACATAGGATTACTTTTGATGGCATCAGCTGGATATGATCCACGCGTGGCATCCTCTGTTTATGAGAAA
CTCGGAAAACTTTCTGGTGATTCAGTAATTCAAAACTATTTGTCTACACATCCATCTGGAAAGAAAAGAGCGGAGCTTCTTAAACAAGCAAAGgtaatggatgaagcacttgggatttacagagagagaatatcagggcatggaattgaagggtttttatgagattttaacatggtttagatatggtacatttgtaaatt
aatctggacaccaatttgtctaccttatggttgatgctttacagcaaaattcacactcagcatacggattaaagatgtgtagttgaaaaaccatttgaagtgtccatttaatgtgctgtccagGAAACGTACGACTCTCACAGGAAGGATTGTACTAGCTTTGGTATTTGTAATAAAATTCTCATCTCTTCAAAATAAAT
TTTGTAAACGCTTTCATCTTGTTCTTTTCATTCAATCTCAAGTGCACACTTAGTGCTATATATGAACGTACATTTCAAAATATGATCAATGAAGTCCAGCGATTATGCACTCTAATGCATATAGATTTGTTTCACACCAAGGTAATTTCATAGAACTGCTCCAGCCTTTATGGTATTGTTCGTACACCATTCAAATTTCA
TGTTCCTCTGTTCGGTTAAGCTTAGAAGCATGCATTTGGATTTGTGAAATATCAATGGCTCTGCTGTAAGTCACATGGTGTGTTTGTAAACAGAGA
Intron 4 GTTGGACATG ... TTTCCCGAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 56.16 | 16 | 22 | 19 |
| A2 | 51.65 | 22 | 32 | 15 |
| A3 | 47.83 | 24 | 33 | 11 |
| A4 | 57.58 | 14 | 21 | 17 |
| A5 | 47.37 | 10 | 12 | 6 |
| A6 | 68 | 28 | 57 | 62 |
| A7 | 50 | 80 | 107 | 53 |
| A8 | 59.32 | 48 | 80 | 60 |
| A9 | 55.18 | 67 | 99 | 66 |
| A10 | 53.01 | 43 | 65 | 32 |
>TRINITY_DN41020_c0_g2_i4 from sample A9 / Example spliced isoformGGAAAACACTAGAACGGTCAATCAGGCCTGTTGAAGAAAATGGCGCCACAAAATAAGGCACGCGTCGTGGCCAGATCACAAATTATTTCCACCGTAAGCTGGAGCATTTGAAGTTTCATCTCAGCATCTACAACGGTGCCAGATTATTACGGGTACGCCATGGCAGCATCCAATGCAGCGCCTGCATAATGCCCTAGGGA
TTAGGGTTTATCGTTTGATGAAATCATTGCAGGGTTTGAATTGAAGAACTTCTGCAATTATTAATAATACACAATTGGCCATCGAGGGATCTAATTTTTTGAGTAGATATCCTAAACCGTAAATTTCATTCAAGGGCTTTCGATCTTTTGAAGCAACGGTTTTCGTTGAAGACTTTGAGACAATTTGTTATCAACCAGGG
ATTCTAATCGAGGAGAAACGAAATATTGGAATCATTTGCAAGGTTTTGGTTGTTTGTTTGGAATCGAGTCTTAATAAAAGAAGAAAGGAATTTTGGAGAATTACATCATACGCTTTTATAAGATAACGAAGGAAGTTGAAGCCTAAAGAAGAAGTGGCAGGCTTTGTATTTTGTGTGAATATAGTCTTGATGCGCATCTT
TATCAATGGCCGTGCCTCATTACAGGAAAGATCTGAAACGGGCTTTTGATTTCGTGTGCAAGAGTGTTTCCACCATTAGCCGCTCGCCTCTCGGTTTAAATGCCAGAGCCACTCACGGCCGTTCAATTGAGTCATCAAAGAGTGGTAATTGTGTAAAATCGGGAGATTTTCAAAATCCCTCGCAGTATGTGAAAACCCTA
GGTCGCAGGTATTATAGCACTGTAAATAAAGGTGAAAGGTCTGGTCCAGTGCAGTGCTGGAAGTATGGGGAACATCCTTCCAGTGCATTGAAGCAAACGTTAAGTAAAGAGGCGGGTAAATTCAGCAAACCTTCTCTTTTGTTGATTGGGATTCAAGGAAGGAGAGCGATCAATCACTCCTTTGGGCCATACGGGACTCA
AAATATATTGCAGGGAAAGCGATTCTATTATGTGGATAGGTATAATGTACAGCACTTTAGACCAAGAGGGCCACGGCGATGGATTGACAATCCACAGAAGCTTTTGGTTATCGTAGTTCTCAGCTCAGGTCTGGTTATTTCTATTTATTTCTCAAATTTGGAAACCGTTCCGTATTCTCATCGCAAGCATTTCGTCTTGA
TATCCGATGAGATGGAAAAAAAGATCGGCGAAAACCAATTTGAGCAGTTGAAAAAGACGTTCAAACCAAAGATTCTTCCAGCAATTCATCCACAAAGTGTGAGAGTGAGACTAATAGCCAAGGATATCATAGAAGCATTACAAAGGGGAACACGACACCAGGAAAGCGGGAGTGATGTTGTTTATAGTAATACAAAAACC
ATTCCGTCTGGTGCTCATACTAGTCAGGATCCCTGGGGCTTAAGGAGCGAAAAAGAAAATAAAGAAGAACAGTTGTACAGCAATGATGAAATCCTAGATGACAAATGGGTTGAGAAGAGTCGTAAGTCTGGAAAAGAGCGTGGGGACAAGGCATCAACTCAGCACTTGAGGGCATTTAATTGGGAAATTCTGGTGGTGGA
TGATCCAATTGTCAATGCATTTTGCCTACCCGGTGGGAAAATAATGGTTTTCACTGGATTGCTGAATGCATTTCCGTCTGATGCAGAGATTGCCACTGTTATCTCTCATGAGGATGGAAGTTGAAGCAGATTACATAGGATTACTTTTGATGGCATCAGCTGGATATGATCCACGCGTGGCATCCTCTGTTTATGAGAAA
CTCGGAAAACTTTCTGGTGATTCAGTAATTCAAAACTATTTGTCTACACATCCATCTGGAAAGAAAAGAGCGGAGCTTCTTAAACAAGCAAAGGTAATGGATGAAGCACTTGGGATTTACAGAGAGAGAATATCAGGGCATGGAATTGAAGGGTTTTTATGAGATTTTAACATGGTTTAGATATGGTACATTTGTAAATT
AATCTGGACACCAATTTGTCTACCTTATGGTTGATGCTTTACAGCAAAATTCACACTCAGCATACGGATTAAAGATGTGTAGTTGAAAAACCATTTGAAGTGTCCATTTAATGTGCTGTCCAGGAAACGTACGACTCTCACAGGAAGGATTGTACTAGCTTTGGTATTTGTAATAAAATTCTCATCTCTTCAAAATAAAT
TTTGTAAACGCTTTCATCTTGTTCTTTTCATTCAATCTCAAGTGCACACTTAGTGCTATATATGAACGTACATTTCAAAATATGATCAATGAAGTCCAGCGATTATGCACTCTAATGCATATAGATTTGTTTCACACCAAGGTAATTTCATAGAACTGCTCCAGCCTTTATGGTATTGTTCGTACACCATTCAAATTTCA
TGTTCCTCTGTTCGGTTAAGCTTAGAAGCATGCATTTGGATTTGTGAAATATCAATGGCTCTGCTGTAAGTCACATGGTGTGTTTGTAAACAGAGA
>TRINITY_DN41020_c0_g2_i3 from sample A9 / Example unspliced isoform:GGAAAACACTAGAACGGTCAATCAGGCCTGTTGAAGAAAATGGCGCCACAAAATAAGGCACGCGTCGTGGCCAGATCACAAATTATTTCCACCGTAAGCTGGAGCATTTGAAGTTTCATCTCAGCATCTACAACGGTGCCAGATTATTACGGGTACGCCATGGCAGCATCCAATGCAGCGCCTGCATAATGCCCTAGGGA
TTAGGGTTTATCGTTTGATGAAATCATTGCAGGGTTTGAATTGAAGAACTTCTGCAATTATTAATAATACACAATTGGCCATCGAGGGATCTAATTTTTTGAGTAGATATCCTAAACCGTAAATTTCATTCAAGGGCTTTCGATCTTTTGAAGCAACGGTTTTCGTTGAAGACTTTGAGACAATTTGTTATCAACCAGGG
ATTCTAATCGAGGAGAAACGAAATATTGGAATCATTTGCAAGGTTTTGGTTGTTTGTTTGGAATCGAGTCTTAATAAAAGAAGAAAGGAATTTTGGAGAATTACATCATACGCTTTTATAAGATAACGAAGGAAGTTGAAGCCTAAAGAAGAAGTGGCAGGCTTTGTATTTTGTGTGAATATAGTCTTGATGCGCATCTT
TATCAATGGCCGTGCCTCATTACAGGAAAGATCTGAAACGGGCTTTTGATTTCGTGTGCAAGAGTGTTTCCACCATTAGCCGCTCGCCTCTCGGTTTAAATGCCAGAGCCACTCACGGCCGTTCAATTGAGTCATCAAAGAGTGGTAATTGTGTAAAATCGGGAGATTTTCAAAATCCCTCGCAGTATGTGAAAACCCTA
GGTCGCAGGTATTATAGCACTGTAAATAAAGGTGAAAGGTCTGGTCCAGTGCAGTGCTGGAAGTATGGGGAACATCCTTCCAGTGCATTGAAGCAAACGTTAAGTAAAGAGGCGGGTAAATTCAGCAAACCTTCTCTTTTGTTGATTGGGATTCAAGGAAGGAGAGCGATCAATCACTCCTTTGGGCCATACGGGACTCA
AAATATATTGCAGGGAAAGCGATTCTATTATGTGGATAGGTATAATGTACAGCACTTTAGACCAAGAGGGCCACGGCGATGGATTGACAATCCACAGAAGCTTTTGGTTATCGTAGTTCTCAGCTCAGGTCTGGTTATTTCTATTTATTTCTCAAATTTGGAAACCGTTCCGTATTCTCATCGCAAGCATTTCGTCTTGA
TATCCGATGAGATGGAAAAAAAGATCGGCGAAAACCAATTTGAGCAGTTGAAAAAGACGTTCAAACCAAAGATTCTTCCAGCAATTCATCCACAAAGTGTGAGAGTGAGACTAATAGCCAAGGATATCATAGAAGCATTACAAAGGGGAACACGACACCAGGAAAGCGGGAGTGATGTTGTTTATAGTAATACAAAAACC
ATTCCGTCTGGTGCTCATACTAGTCAGGATCCCTGGGGCTTAAGGAGCGAAAAAGAAAATAAAGAAGAACAGTTGTACAGCAATGATGAAATCCTAGATGACAAATGGGTTGAGAAGAGTCGTAAGTCTGGAAAAGAGCGTGGGGACAAGGCATCAACTCAGCACTTGAGGGCATTTAATTGGGAAATTCTGGTGGTGGA
TGATCCAATTGTCAATGCATTTTGCCTACCCGGTGGGAAAATAATGGTTTTCACTGGATTGCTGAATGCATTTCCGTCTGATGCAGAGATTGCCACTGTTATCTCTCATGAGgttggacatgctgtggcaaggcatgcagcagaaggcatgacgagcaatttgtggtttgcaattttacaaatcattcttcttcagttca
ttggtatgccagatgttgtttatgcaatgtcaaatctacttttgaaacttcccttttcccgaagGATGGAAGTTGAAGCAGATTACATAGGATTACTTTTGATGGCATCAGCTGGATATGATCCACGCGTGGCATCCTCTGTTTATGAGAAACTCGGAAAACTTTCTGGTGATTCAGTAATTCAAAACTATTTGTCTACA
CATCCATCTGGAAAGAAAAGAGCGGAGCTTCTTAAACAAGCAAAGGTAATGGATGAAGCACTTGGGATTTACAGAGAGAGAATATCAGGGCATGGAATTGAAGGGTTTTTATGAGATTTTAACATGGTTTAGATATGGTACATTTGTAAATTAATCTGGACACCAATTTGTCTACCTTATGGTTGATGCTTTACAGCAAA
ATTCACACTCAGCATACGGATTAAAGATGTGTAGTTGAAAAACCATTTGAAGTGTCCATTTAATGTGCTGTCCAGGAAACGTACGACTCTCACAGGAAGGATTGTACTAGCTTTGGTATTTGTAATAAAATTCTCATCTCTTCAAAATAAATTTTGTAAACGCTTTCATCTTGTTCTTTTCATTCAATCTCAAGTGCACA
CTTAGTGCTATATATGAACGTACATTTCAAAATATGATCAATGAAGTCCAGCGATTATGCACTCTAATGCATATAGATTTGTTTCACACCAAGGTAATTTCATAGAACTGCTCCAGCCTTTATGGTATTGTTCGTACACCATTCAAATTTCATGTTCCTCTGTTCGGTTAAGCTTAGAAGCATGCATTTGGATTTGTGAA
ATATCAATGGCTCTGCTGTAAGTCACATGGTGTGTTTGTAAACAGAGACAATAGCGGTTGTTGTGTTTTAATTGATCGATTGATGATTTATACCTTCCAAAAAGGGAAATCCCTTAGTAGCCCAAG
Intron 5 GTACGCCATG ... CTCTCATGAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 91.67 | 2 | 7 | 22 |
| A2 | 84.21 | 6 | 20 | 32 |
| A3 | 76.74 | 10 | 36 | 33 |
| A4 | 72.41 | 8 | 17 | 21 |
| A5 | 92.31 | 1 | 10 | 12 |
| A6 | 83.82 | 11 | 5 | 57 |
| A7 | 89.92 | 12 | 19 | 107 |
| A8 | 80.81 | 19 | 2 | 80 |
| A9 | 84.26 | 18.5 | 13.5 | 99 |
| A10 | 86.67 | 10 | 7 | 65 |
>TRINITY_DN43930_c0_g1_i3 from sample A7 / Example spliced isoformGGCCTGTTGAAGAAAATGGCGCCACAAAATAAGGCACGCGTCGTGGCCAGATCGCAACTTATTTCCACCGTAAGCTGGAGCATTTGAAGTTTCATCTCAGCATCTACAACGGTGCCAGATTATTACGGGTTGGACATGCTGTGGCAAGGCATGCAGCAGAAGGCATGACGAGCAATTTGTGGTTTGCAATTTTACAAATC
ATTCTTCTTCAGTTCATTGGTATGCCAGATGTTGTTTATGCAATGTCAAATCTACTTTTGAAACTTCCCTTTTCCCGAAGGATGGAAGTTGAAGCAGATTACATAGGATTACTTTTGATGGCATCAGCTGGATATGATCCACGCGTGGCATCCTCTGTTTATGAGAAACTCGGAAAACTTTCTGGTGATTCAGTAATTCA
AAACTATTTGTCTACACATCCATCTGGAAAGAAAAGAGCGGAGCTTCTTAAACAAGCAAAGGTAATGGATGAAGCACTTGGGATTTACAGAGAGAGAATATCAGGGCATGGAATTGAAGGGTTTTTATGAGATTTTAACATGGTTTAGATATGGTACATTTGTAAATTAATCTGGACACCAATTTGTCTACCTTATGGTT
GATGCTTTACAGCAAAATTCACACTCAGCATACGGATTAAAGATGCGTAGTTGAAAAACCATTTGAAGTGTCCATTTAATGTGCTGTCCAGGAAACGTACAACTCTCACAGGAAGGATTGTACTAGCTTTGGTATTTGTAATAAAATTCTCATCTCTTCAAAATAAATTTTGTAAACGCTTTCATCTTGTTCTTTTCATT
CAATCTCAAGTGCACACTTAGTGCTATATATGAACGTACATTTCAAAATATGATCAATGAAGTCCAGCGATTATGCACTCTAATGCATATAGATTTGTTTCACACCAAGGTAATTTCATAGAACTGCTCCAGCCTTTATGGTATTGTTCGTACACCATTCAAATTTCATGTTCCTCTGTTCGGTTAAGCTTAGAAGCATG
CATTTGGATTTGTGAAATATCTATGGCTCTGCTGTAAGTCACATGGTGTGTTTGTAAACAGAGAGAATAGTGGTTGTTGTGTTTTAATTGATCGATTGATGATTTATACCTTCC
>TRINITY_DN43930_c0_g1_i2 from sample A7 / Example unspliced isoform:GGCCTGTTGAAGAAAATGGCGCCACAAAATAAGGCACGCGTCGTGGCCAGATCGCAACTTATTTCCACCGTAAGCTGGAGCATTTGAAGTTTCATCTCAGCATCTACAACGGTGCCAGATTATTACGGgtacgccatggcagcatccaatgcagcgcctgcataatgccctagggattagggtttatcgtttgatgaaat
cattgcagggtttgaattgaagaacttctgcaattattaataatacacaattggccatcgagggatctaattttttgagtagatatcctaaaccgtaaatttcattcaagggctttcgatcttttgaagcaacggttttcgttgaagactttgagacaatttgttatcaaccagggattctaatcgaggagaaacgaaat
attggaatcatttgcaaggttttggttgtttgtttggaatcgagtcttaataaaagaagaaaggaattttggagaattacatcatacgcttttataagataacgaaggaagttgaagcctaaagaagaagtggcaggctttgtattttgtgtgaatatagtcttgatgcgcatctttatcaatggccgtgcctcattaca
ggaaagatctgaaacgggcttttgatttcgtgtgcaagagtgtttccaccattagccgctcgcctctcggtttaaatgccagagccactcacggccattcaattgagtcatcaaagagtggtaattgtgtaaaatcgggagattttcaaaatccctcgcagtatgtgaaaaccctaggtcgcaggtattatagcactgta
aataaaggtgaaaggtctggtccagtgcagtgctggaagtatggggaacatccttccagtgcattgaagcaaacgttaagtaaagaggcgggtaaattcagcaaaccttctcttttgttgattgggattcaaggaaggagagcgatcaatcactcctttgggccatacgggactcaaaatatattgcagggaaagcgatt
ctattatgtggataggtataatgtacagcactttagaccaagagggccacggcgatggattgacaatccacagaagcttttggttatcgtagttctcagctcaggtctggttatttctatttatttctcaaatttggaaaccgttccgtattctcatcgcaagcatttcgtcttgatatccgatgagatggaaaaaaaga
tcggcgaaaaccaatttgagcagatgaaaaagacgttcaaaccaaagattcttccagcaattcatccacaaagtgtgagagtgagactaatagccaaggatatcatagaagcattacaaaggggaacacgacaccaggaaagcgggagtgatgttgtttatagtaatacaaaaaccattccgtctgatgctcatactagt
caggatccctggggcttaaggagcgaaaaagaaaataaagaagaacagttgtacagcaatgatgaaatcctagatgacaaatgggttgagaagagtcgtaagtctggaaaagagcgtggggacaaggcatcaactcagcacttgagggcatttaattgggaaattctggtggtggatgatccaattgtcaatgcattttg
cctacccggtgggaaaataatggttttcactggattgctgaatgcatttccgtctgatgcagagattgccactgttatctctcatgagGTTGGACATGCTGTGGCAAGGCATGCAGCAGAAGGCATGACGAGCAATTTGTGGTTTGCAATTTTACAAATCATTCTTCTTCAGTTCATTGGTATGCCAGATGTTGTTTATG
CAATGTCAAATCTACTTTTGAAACTTCCCTTTTCCCGAAGCATTGTGAGACATTTCATGGTGCATGAAGAGGACATTTCAGATCCTATTTCCTTTGATATTGGACAGCTAGAAGATGTTGAGGATGGAAGTTGAAGCAGATTA