sp|O22938|PXC3_ARATH ----> Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3

Intron 1 GTTTTCACTT ... TATCATTCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	56.25	7	9	3
A2	0	4	0	0
A3	44.44	5	4	3
A4	50	4	4	1
A5	0	6	0	2
A6	50	5	5	0
A7	57.14	12	16	0
A8	50	4	4	0
A9	52.63	9	10	4
A10	70	3	7	5

>TRINITY_DN107549_c0_g1_i2 from sample A1 / Example spliced isoform

CACGAGTAGGATTAGGGTTAAACTTGCAGTCAAGGGCGATTGATAAAACTCAAAGTCAGGGTCAAGTGCACACATTTTCAATTCGGCAGTCTGGTTCTTCAAGGTGCTAGTATGGGGCCCAAGAAAACAAAGACGGAGAATGGAAGAGGACCTGCAATTGCTCCGAACCTTCAACTCCCTTGTCAGGCATCTGCACATCT
TGACCAAAACTCGAAGGGACTGGGGAGGGAGCCTGAGACAAAATCTGTGCAGGAGACGGATGCCCATCAAATAGGTTGAAGCAGGGATTGCATGCATTTTTCGTTTCTTTGCTGTGAAAAATGAGGTATTGTTGGACATATTCTCCTTTTCTCAGTCTCCTGTTCATTCTTTCATGTTTGGATTCTGGAATTTGTCTCGA
TA

>TRINITY_DN107549_c0_g1_i1 from sample A1 / Example unspliced isoform:

CACGAGTAGGATTAGGGTTAAACTTGCAGTCAAGGGCGATTGATAAAACTCAAAGTCAGGGTCAAGTGCACACATTTTCAATTCGGCAGTCTGGTTCTTCAAGGTGCTAGTATGGGGCCCAAGAAAACAAAGACGGAGAATGGAAGAGGACCTGCAATTGCTCCGAACCTTCAACTCCCTTGTCAGGCATCTGCACATCT
TGACCAAAACTCGAAGgttttcacttttaatcgtcaatccttagactttctgaattttgaaaatgacacccattgaataacaatggaaaccctgcatacccaataatatatatcattcagGGACTGGGGAGGGAGCCTGAGACAAAATCTGTGCAGGAGACGGATGCCCATCAAATAGGTTGAAGCAGGGATTGCATGCA
TTTTTCGTTTCTTTGCTGTGAAAAATGAGGTATTGTTGGACATATTCTCCTTTTCTCAGTCTCCTGTTCATTCTTTCATGTTTGGATTCTGGAATTTGTCTCGATA

Intron 2 GTTTTCACTT ... TATCATTCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	57.29	6	8	1.5
A2	0	3.5	0	0
A3	48.61	4.3	4	1.5
A4	44.64	4	3.3	0.3
A5	0	5.5	0	0.5
A6	47.11	6.8	6	0
A7	57.14	12	16	0
A8	50	4	4	0
A9	53.53	10	11.5	2.5
A10	57.14	3	4	2.8

>TRINITY_DN42409_c0_g2_i3 from sample A9 / Example spliced isoform

GGATTGTTTACCAAGCTGTCTCCGGAACTAACACGAGTAGGATTAGGGTTAAACTTGCAGTCAAGGGCGATTGATAAAACTCAAAGTCAGGGTCAAGTGCACACATTTTCAATTCGGCAGTCTGGTTCTTCAAGGTTCTAGTATGGGGCCCAAGAAAACAAAGACGGAGAATGGAAGAGGAGCTGCAATTGCTCCGAACC
TTCAACTCCCTTGTCAGGCATCTGCACATCTTGACCAAAACTCGAAGGGACTGGGGAGGGAGCCTGAGACAAAATCTGTGCGGGAGACGGATGCCCATCAAATAGAATATGCATACACTATGAGAG

>TRINITY_DN42409_c0_g2_i8 from sample A9 / Example unspliced isoform:

GGATTGTTTACCAAGCTGTCTCCGGAACTAACACGAGTAGGATTAGGGTTAAACTTGCAGTCAAGGGCGATTGATAAAACTCAAAGTCAGGGTCAAGTGCACACATTTTCAATTCGGCAGTCTGGTTCTTCAAGGTTCTAGTATGGGGCCCAAGAAAACAAAGACGGAGAATGGAAGAGGAGCTGCAATTGCTCCGAACC
TTCAACTCCCTTGTCAGGCATCTGCACATCTTGACCAAAACTCGAAGgttttcacttttactcttcaatccctagactttctgaattttgaaaatgacacgcattgaataacaaggaaaccctgcatacccaataatatatatcattcagGGACTGGGGAG