NA ----> NA
Intron 1 GTTCATTCAG ... TTATGCGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | -1 | 0 | 0 | 0 |
| A2 | 33.33 | 1 | 0 | 1 |
| A3 | 38.89 | 11 | 8 | 6 |
| A4 | 50 | 1 | 1 | 1 |
| A5 | 100 | 0 | 0 | 2 |
| A6 | 78.95 | 2 | 8 | 7 |
| A7 | 62.5 | 3 | 5 | 5 |
| A8 | 86.67 | 1 | 2 | 11 |
| A9 | 100 | 0 | 1 | 2 |
| A10 | 61.9 | 4 | 5 | 8 |
>TRINITY_DN45470_c2_g3_i1 from sample A8 / Example spliced isoformCGTGAACAGAAAAATCAGTTAGAATCTCACGATCCATGCAAAAGATTAATGGAAAGATTAATGGAAGTTGACTGTTGTTAAGGAAGCATTTGCAGCAAACCGCATGTGAAATAGAATCAGTTTTAATTTCTGCTAAATTTGTCTTCATTTCTGAAATGGAGTTCTCCGGTAGTAATACCTGATCACGCCGGCTACCTGAA
ATCTATATTTAACACGCCATCGAAGAACACTGAACAGATAACATCAGATCTAATTTGTTATTGATCTGAGAGATTTCTGCCTGTGATTGAGGAGTCTTTCTTCGAAGGCAAACTACCAGATCGTTGTGACAGTTCATGGAGGATGCAGTTACAATGGATCGCCCTTTGATCGCAGAAGTTCCACCATGATCGCATACATA
CTGGTTAACATTGAATACGATGGTGAATGCACAGGAATTACGTTTTGAAGATACATACTTGAATCTGTCCACCAACAATAAAGAAGGTTATACCAGATTCCGAGCATATCGTAGCTCATGAGGAATAAAATTAAATCACTCAGTTCATGCAAGAGACAGCAAGACGAAGCTCGTTCCACAGATAGGCTAAAGATTTATGA
AATCACGACCACTTCAGCAGGGAAAAGAGGAAGACTAGCATAAAGATGGAGTTTGTTTTGAACAATACGCCTGAGATCCTGCCAGAAAAGATGTAAATAGATTCTTTATCATTGCATCTGCTCATAGGGAAGGGGATCTGTCATTAGTATTCATGGCTTATAAAAGCAAAGAATATCACCTGTGTAGTGGGGGTCTCGTC
AGAATAAGTGAAACCTTGTTTTCATTATTCTATTTCTATTTTGTAAAATTTATGTTTGCAGAGTGGAGGAGACATTGCCATGGAGGAGGCTCTGTAAAGGATGAACGGAAGTTTTTCCGAGAAGCTTTATTATTTTCTCCTATTGGTTCGAATTCTGGATAATAGAGGAAGGCGATATCAATACAATATATAATAGTGTT
ATTTTCTGC
>TRINITY_DN45470_c2_g3_i2 from sample A8 / Example unspliced isoform:CGTGAACAGAAAAATCAGTTAGAATCTCACGATCCATGCAAAAGATTAATGGAAAGATTAATGGAAGTTGACTGTTGTTAAGGAAGCATTTGCAGCAAACCGCATGTGAAATAGAATCAGTTTTAATTTCTGCTAAATTTGTCTTCATTTCTGAAATGGAGTTCTCCGGTAGTAATACCTGATCACGCCGGCTACCTGAA
ATCTATATTTAACACGCCATCGAAGAACACTGAACAGATAACATCAGATCTAATTTGTTATTGATCTGAGAGATTTCTGCCTGTGATTGAGGAGTCTTTCTTCGAAGGCAAACTACCAGATCGTTGTGACAGTTCATGGAGGATGCAGTTACAATGGATCGCCCTTTGATCGCAGAAGTTCCACCATGATCGCATACATA
CTGgttcattcagcgatattacgagactgatcaagagagaagattcttgttattttaccatttatctttctgttttagccgattttagcctgtgtagcttatgtctaatatatctatatttatgcgcagGTTAACATTGAATACGATGGTGAATGCACAGGAATTACGTTTTGAAGATACATACTTGAATCTGTCCACCA
ACAATAAAGAAGGTTATACCAGATTCCGAGCATATCGTAGCTCATGAGGAATAAAATTAAATCACTCAGTTCATGCAAGAGACAGCAAGACGAAGCTCGTTCCACAGATAGGCTAAAGATTTATGAAATCACGACCACTTCAGCAGGGAAAAGAGGAAGACTAGCATAAAGATGGAGTTTGTTTTGAACAATACGCCTGA
GATCCTGCCAGAAAAGATGTAAATAGATTCTTTATCATTGCATCTGCTCATAGGGAAGGGGATCTGTCATTAGTATTCATGGCTTATAAAAGCAAAGAATATCACCTGTGTAGTGGGGGTCTCGTCAGAATAAGTGAAACCTTGTTTTCATTATTCTATTTCTATTTTGTAAAATTTATGTTTGCAGAGTGGAGGAGACA
TTGCCATGGAGGAGGCTCTGTAAAGGATGAACGGAAGTTTTTCCGAGAAGCTTTATTATTTTCTCCTATTGGTTCGAATTCTGGATAATAGAGGAAGGCGATATCAATACAATATATAATAGTGTTATTTTCTGC