sp|O80574|DAPB1_ARATH ----> 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic
Intron 1 GTTATATTCT ... ACTGGAGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 13.91 | 359 | 0 | 58 |
| A2 | 10.89 | 311 | 0 | 38 |
| A3 | 11.49 | 262 | 2 | 34 |
| A4 | 14.44 | 243 | 2 | 41 |
| A5 | 5 | 133 | 0 | 7 |
| A6 | 12.91 | 1552 | 0 | 230 |
| A7 | 12.6 | 1485 | 0 | 214 |
| A8 | 13.84 | 1675 | 0 | 269 |
| A9 | 12.88 | 1332 | 0 | 197 |
| A10 | 10.95 | 1082 | 3 | 133 |
>TRINITY_DN45552_c0_g3_i2 from sample A10 / Example spliced isoformTCAAATATTTTGCTTCACCAAATTCCAACAAGTATAATGTTTTCCGGAATTCACCGACGTCGCATCTACGTGCACCCACGAATGTTGAACCACTGAACTGTTGCGCCGTTTCTCAATTGGGAATCTCTTGACTAGTTTTATGTTATTTCAATTCGGATACTCTTCAGTAGCTTTATACTTTATTCCGAAGAGCTAGTTAA
AATTTTGTCTGAAGACGGGAGCTGGTGCCACCGCCCGCACTAGCACACCAAGAAATCTAAATCCGTTTTGAAACCGAGTAAAGCCCAGTGCCGATATAGGCAGGTTGCTTTAGAAGCTGTGAAAAATGCCTGCGAGGGCCATTGGCACTCCTCTTCAATCCTGCACTCCCCTTCTGCATAACCAATGGCAATGCAATGCA
GAACTGCACCGTCGGTGGGTTGGAAATGTCCATCCCATAGCATCTCCAGCAGCCATTCCACGGAGATTACATATGAAGAGGAGTTTCACCTGTAAATGCGTTGCAAATGTGGACACGCATCAGAATGTTTCTCTCAAATCCACACTAACCGCTATTCCTGTCATGGTAAATGGTTGTGCTGGTAATATGGGAAGAGCAGT
GGCAGAAGCAGCCCTTAGTGCAGGCCTTCAGCTTGTTCCTCTGTCTCTCACGAGTCCCGATCTAAGAGATCAAAAGGTCCATATAGGAGATGTGGAAGTTGATGTATGCAGTGCATCAGAAAAAGAGGCTGTCTTTGATTCTGTCCTTCAGAAGTATCCTGATGTAGTTGTAGTAGATTTCACGGTCCCTTCTGCTGTAA
ATCAAAATGCCGAACTTTACTGTAAAATAGGTGTCCCATTTGTAATGGGCACCACTGGAGGAGACCGCGAAAAGCTATTTGACTTGGTACAGAAGTCTAATAACTATGCTGTCATTTCACCGCAGATGGGAAAACAGGTGGTTGCATTCCAGGCAGCGATGGAGACCATGGCAAGGGAGTTCCCTGGGGCCTTTTCAGGC
TACACACTAAAGGTCACGGAATCTCATCAGTCAAGTAAGATAGACACATCAGGCACAGCAAAAGCAATTGTTTCAAGTTTCCAAAGGCTTGGTGTTAGATTCAATTCAGATCAGATAGAGAAGGTTCGAGACCCCACTGAACAAATTCAAAAGATGGGAGTTCCAGAAGAATATTTGGGAGGTCATGCATTCCACACATA
TAGCCTCACGTCTCCTGATAACACAGTTTCTTTTCAATTTCAACATAATGTGTGTGGAAGGTCAATATATGCCCAGGGTACCATTGATGCTGTCATTTTTCTGGCAAGGAAGGTTCAATTGAAAGCAGAGAAGAGGCTTTACAATATGATCGATGTTTTGCATGAAGGTAATATGCGTTGATGCTCTTTGTATTTGATCC
AGAGTTTGGTGTCAGAGGATATTCCCTTTTCCACATTTGCAATGACGAGAAGAAATGCTAGAAGCTGTTAGTTTGTTGGCAAGAGAAAGATTATTCCCATTCAAATTCTCAGGTGGCCTTTATCTTCCTGTCCTTGAAGCATATTTGACCATCATTTTCATTCTTCTTCTTGTTGCCTTATTTGGATGATTTCGATCCTT
TTTCCAGAGAGGATTGAGAAGGCATATCTGAACCTTTTTCTGGGCCTGTTTAGCATATGATAAACACAATATTTTAACTATACACAATATCAGTCAATTTTGTTACAACTTTGCTTATACCAATACTGCTCATTGTATTTAAATTTTTATGACTAGAACTATGGCCTGTTCCTTTAAAACCTGTTTTCTTAGGGGGTATG
AAACATTCTTCCTTTGATGCATTGCTTCTTTAAACTATTTGCAGAATATATATATATATATATATATAGT
>TRINITY_DN45552_c0_g3_i1 from sample A10 / Example unspliced isoform:AGCCTCACGTCTCCTGATAACACgttatattctctatccctccatttttttaatctaaccttgctttgtcctaacttctatgatctcgtattggaaaattaaattctctcctattataaccttctctatacatccataaatctgttcttatgttgtactggagcagAGTTTCTTTTCAATTTCAACATAATGTGTGTGGA
AGGTCAATATATGCCCAGGGTACCATTGATGCTGTCATTTTTCTGGCAAGGAAGGTTCAATTGAAAGCAGAGAAGAGGCTTTACAATATGATCGATGTTTTGCATGAAGGTAATATGCGTTGATGCTCTTTGTATTTGATCCAGAGTTTGGTGTCAGAGGATATTCCCTTTTCCACATTTGCAATGACGAGAAGAAATGC
TAGAAGCTGTTAGTTTGTTGGCAAGAGAAAGATTATTCCCATTCAAATTCTCAGGTGGCCTTTATCTTCCTGTCCTTGAAGCATATTTGACCATCATTTTCATTCTTCTTCTTGTTGCCTTATTTGGATGATTTCGATCCTTTTTCCAGAGAGGATTGAGAAGGCATATCTGAACCTTTTTCTGGGCCTGTTTAGCATAT
GATAAACACAATATTTTAACTATACACAATATCAGTCAATTTTGTTACAACTTTGCTTATACCAATACTGCTCATTGTATTTAAATTTTTATGACTAGAACTATGGCCTGTTCCTTTAAAACCTGTTTTCTTAGGGGGTATGAAACATTCTTCCTTTGATGCATTGCTTCTTTAAACTATTTGCAGAATATATATATATA
TATATATATAGT
Intron 2 GTGAGTGAAA ... CAATGTGTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 18.55 | 428 | 122.3 | 97.5 |
| A2 | 17.63 | 327 | 86 | 70 |
| A3 | 17.49 | 349 | 85.8 | 74 |
| A4 | 16.63 | 361 | 104.3 | 72 |
| A5 | 25.69 | 162 | 48.5 | 56 |
| A6 | 18.86 | 1372.5 | 346.5 | 319 |
| A7 | 17.46 | 1422.5 | 352.8 | 301 |
| A8 | 18.88 | 1147.5 | 263.3 | 267 |
| A9 | 19.69 | 1309.5 | 320 | 321 |
| A10 | 14.43 | 1117.8 | 340.3 | 188.5 |
>TRINITY_DN115870_c0_g1_i3 from sample A1 / Example spliced isoformCCGGAATTCACCGACGTCGCATCTACGTGCACCCACGAATGTTGAACCACTGAACTGTTGCGCCGTTTCTCAATTGGGAATCTCTTGACTAGTTTTATGTTATTTCAATTCGGATACTCTTCAGTAGCTTTATACTTTATTCCGAAGAGCTAGTTAAAATTTTGTCTGAAGACGGGAGCTGGTGCCACCGCCCGCAGTAG
CACACCAAGAAATCTAAATCCGTTTTGAAACCGAGTAAAGCCCAGTGCCGATATAGGCAGGTTGCTTTAGAAGCTGTGAAAAATGCCTGCGAGGGCCATTGGCACTCCTCTTCAATCCTGCACTCCCCTTCTGCATAACCAATGGCAATGCAATGCAGAACTGCACCCTCGGGGGGTTGGAAATGTCCATCCCATAGCAT
CTCCAGCAGCCATTCCACGGAGATTACATATGAAGAGGAGTTTCACCTGTAAATGCGTTGCAAATGCGGACACGCATCAGAATGTTTCTCTCAAATCCACACTAACCGCTATTCCTGTCATGGTAAATGGGTGTGCTGGTAATATGGGAAGAGCAGTGGCAGAAGCAGCCCTTAGTGCAGGCCTTCAGCTTGTTCCTCTG
TCTCTCACGAGTCCCGATCTAAGAGATCAAAAGGTCCATATAGGAGATGTGGAAGTTGATGTATGCAGTGCATCAGAAAAAGAGGCTGTCTTTGATTCTGTCCTTCAGAAGTATCCTGATGTTGTTGTAGTAGATTTCACGGTCCCTTCTGCTGTAAATCAAAATGCCGAACTTTACTGTAAAATAGGTGTCCCATTTGT
AATGGGCACCACTGGAGGAGACCGCGAAAAGCTATTTGACTTGGTACAGAAGTCTAATAACTATGCTGTCATTTCACCGCAGATGGGAAAACAGGTGGTTGCATTCCAGGCAGCGATGGAGACCATGGCAAGGGAGTTCCCTGGGGCCTTTTCAGGCTACACACTAAAGGTTTGGCTATTCATCTCTTTGCCTGCTTTCC
ACACTCTTATAAATATCTGGATATGATTGTGTGGGGCCTTTTCACTAAGTATTTATTTTTGTTTCATGCCAAATTCTCTCTTTAAGGCAGGCTATTTTGTTCTGTTTTTTTTTGCTAGCTGCTATCTATATCAGCTTTGTGTAAAGATGGATGGAACTTGTCTCCGGT
>TRINITY_DN115870_c0_g1_i2 from sample A1 / Example unspliced isoform:CCGGAATTCACCGACGTCGCATCTACGTGCACCCACGAATGTTGAACCACTGAACTGTTGCGCCGTTTCTCAATTGGGAATCTCTTGACTAGTTTTATGTTATTTCAATTCGGATACTCTTCAGTAGCTTTATACTTTATTCCGAAGAGCTAGTTAAAATTTTGTCTGAAGACGGGAGCTGGTGCCACCGCCCGCAGTAG
CACACCAAGAAATCTAAATCCGTTTTGAAACCGAGTAAAGCCCAGTGCCGATATAGGCAGGTTGCTTTAGAAGCTGTGAAAAATGCCTGCGAGGGCCATTGGCACTCCTCTTCAATCCTGCACTCCCCTTCTGCATAACCAATGGCAATGCAATGCAGAACTGCACCCTCGGGGGGTTGGAAATGTCCATCCCATAGCAT
CTCCAGCAGCCATTCCACGGAGATTACATATGAAGAGGAGTTTCACCTGTAAATGCGTTGCAAATGCGGACACGCATCAGAATGTTTCTCTCAAATCCACACTAACCGCTATTCCTGTCATGGTAAATGGGTGTGCTGGTAATATGGGAAGAGCAGTGGCAGAAGCAGCCCTTAGTGCAGGCCTTCAGCTTGTTCCTCTG
TCTCTCACGAGTCCCGATCTAAGAGATCAAAAGGTCCATATAGGAGATGTGGAAGTTGATGTATGCAGTGCATCAGAAAAAGAGGCTGTCTTTGATTCTGTCCTTCAGAAGTATCCTGATGTTGTTGTAGTAGATTTCACGGTCCCTTCTGCTGTAAATCgtgagtgaaaatttagtttcttctttcgtaaactgtttta
agtattcaggttagcatccgaaactttaatcagataaagggatatattaagtgttttctaccaagttactcatggtctgctttaaagtttgcaatacccccctttcaaaggtttattctgaacaataaggagttagtaaagacattgattttatatacagagattggaggctataacacatgcatagtaattactctgtt
aaaaactcatctagtgacacaaactatgttcttaccatccaatgtgtagAAAATGCCGAACTTTACTGTAAAATAGGTGTCCCATTTGTAATGGGCACCACTGGAGGAGACCGCGAAAAGCTATTTGACTTGGTACAGAAGTCTAATAACTATGCTGTCATTTCACCGCAGATGGGAAAACAGGTGGTTGCATTCCAGGC
AGCGATGGAGACCATGGCAAGGGAGTTCCCTGGGGCCTTTTCAGGCTACACACTAAAGGTCACGGAATCTCATCAGTCAAGTAAGATAGACACATCAGGCACAGCAAAAGCAATTGTTTCAAGTTTCCAAAGGCTTGGTGTTAGATTCAATTCAGATCAGATAGAGAAGGTTCGAGACCCCACTGAACAAATTCAAAAGA
TGGGAGTTCCAGAAGAATATTTGGGAGGTCATGCATTCCACACATATAGCCTCACGTCTCCTGATAACACAGTTTCTTTTCAATTTCAACATAATGTGTGTGGAAGGTCAATATATGCCCAGGGTACCATTGATGCTGTCATTTTTCTGGCAAGGAAGGTTCAATTGAAAGCAGAGAAGAGGCTTTACAATATGATCGAT
GTTTTGCATGAAGGTAATATGCGTTGATGCTCTTTGTATTTGATCCAGAGTTTGGTGTCAGAGGATATTCCCTTTTCCACATTTGCAATGACGAGAAGAAATGCTAGAAGCTGTTAGTTTGTTGGCAAGAGAAAGATTATTCCCATTCAAATTCTCAGGTGGCCTTTATCTTCCTGTCCTTGAAGCATATTTGACCATCA
TTTTCATTCTTCTTCTTGTTGCCTTATTTGGATGATTTCGATCCTTTTTCCAGAGAGGATTGAGAAGGCATATCTGAACCTTTTTCTGGGCCTGTTTAGCATATGATAAACACAATATTTTAACTATACACAATATCAGTCAATTTTGTTACAACTTTGCTTATACCAATACTGCTCATTGTATTTAAATTTTTATGACT
AGAACTATGGCCTGTTCCTTTAAAACCTGTTTTCTTAAGGGGTATGAAACATTCTTCCTTTTATGCATTGCTTCTTTAAACTATTTGCAGAATATACACACACAAAACATAGACTCTTTGGACAGAAACACATTGGAAACATGAGCCCACGTTTCAAGGACACATTTTCACTACCAAAACACCACCAGGATGTTTCTGGC
CTGGAAACGTGGGGAAGGGCATCTCCTGCAACTCACCATCATTTTCATTCTTCTTCT