NA ----> NA
Intron 1 GTAATATATT ... ATTGTTATAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 65.71 | 12 | 26 | 20 |
| A2 | 75 | 2 | 7 | 5 |
| A3 | 63.93 | 11 | 22 | 17 |
| A4 | 78.08 | 8 | 30 | 27 |
| A5 | 53.85 | 3 | 1 | 6 |
| A6 | 72.41 | 12 | 31 | 32 |
| A7 | 72.65 | 16 | 36 | 49 |
| A8 | 68.25 | 10 | 17 | 26 |
| A9 | 75.76 | 8 | 20 | 30 |
| A10 | 74.55 | 7 | 22 | 19 |
>TRINITY_DN38989_c0_g1_i3 from sample A6 / Example spliced isoformATGCGTGTGAAAAAGACGCAGAGGAGATATGTGATCTTGCTGCCAGAATGACATTTGATGATCAGCAAAAGCAAGTCCAAGAAAATGTACATAGTCAAATTCAAGATATTTGTAGAGTTATGGATGATATTCTGGTTCCAGATGCAGGAAAGGAAAAACCAATAATAAAGCTCGACAGCACACCAGTCAAGGAGAGCACA
CGTCGCAGCGGCCTTAGTTTTGCTGTAGGCGGAAGCAGGACATGTTCAATTCCAGACACCACTGCTGTTGCCGCAACTCGGCCCATCAAAAGTGTGGAATTGTCTAATGCTTTGAAGGAGCGCATTGGATATACTCTTGAATTGAGGACATCGAAAATATGCCATGAAGAAGCAGGTCAAGGCCTCTATTTGAGTGGAAA
AGCTGGGATTGGGGCTGTTGTCTCATTTTACCCTGGGATGCTCAACCTTGGGGAACTGGTGGCGAAGCTCGTCAATTATGGGATGGCTTTTTTGATAAGAGAATGGCAAAATCCTCTGGAAACAGTAAAGAAACTAAGGTTGATGTTCTGTGGCGAGTGCTTAGTAAACCAGAGGAGAACAGGTCTTTGATAAAAGGTGC
TGTTGTGGAGAGGAGGAATCCCTTTGCTTTAGGACATTTTGCAAATCATCCTGAAAAAGGAACACAACCAAATGTGATGGTTTGCCCCTATAATTTTTATTTACCTGAAACAAGGATGAGGCCATACATTCCTAATTTAGTGTTTGGTAGCGATGAGGAAATAACCATGCAAAGGTATGGTTCATTCTGGCTAAAATCGA
CATCTGCAAATCATGAGAATTCAGTTCCTCCGGCAATTCGTACATTGGTCCTTGTGGCAACAAGGCCAATATGTGATGAAGAAATATTTCTCAACTATAGATTGAGTAACCCCAAAAAGAGGCCCACTTGGTATCATCCAGTTGATGAGGATGAAGATCGGCGGAGGTGGAGCTGAATACATTGCATTGATAGAAAATAA
GTCCAGTTCAGATATTATTCTTGATACATTATTCAGGAGGCTGAACAATAATGCTGGCTAAAGATCCGGGTCCCTCTTTTGCAATAGTAGACTAGCATTTTTCTATGATGGGATTATCTAGTAGGCCTCTTTCGTGAAATGTACATTTGAAATGAGCACACGGTCTTCCACATATGACCTGTTTAGAAAGGCAGTCCAGG
ATTCTAGGTTTTTTAATTGTTTCAGGATTTTAGTCCTTGAAACTCTGCTTGATTTTTTTCCTTTTTAGAGGTCTGGCTGCTTTAGACTCTGGAAACATAACTCCCAATTTATGTTATAGCCTGGGCTGGTAGTCTCTTATGACTGGTGGCTGAGATTATGCCCAAAAGTTAAGTTGTAGTAGTTGTGGAACTAACTCTCA
ATAAAGATGTCAATTCTCTCTCTAATCCTGATTGAATGGATGCAAGCGAACTTAAAATTAAGGAGTTGCAAAATCTATTGCAAGTTGTGGCCCACTTTATCTGAAGGCTACCTAGATAGTAGTCAGCTTTGTTTGTTTAGCC
>TRINITY_DN38989_c0_g1_i1 from sample A6 / Example unspliced isoform:GGGAAATGTTTAACTTTCAAGGATACTAATACCTATACAAGACTCTAACGATGCCCACAGCACAAGCTGAGTGACCTACATTCTGAAGGGGTTCATTATTTCAAAGCAAAGGGAGAAGCTTCACCGTCACAAATGGCTACCATCGTTCAAAAACTGCGTAAGCTACAATCATTTCATCAAGAATGCGTGTGAAAAAGACG
CAGAGGAGATATGTGATCTTGCTGCCAGAATGACATTTGATGATCAGCAAAAGCAAGTCCAAGAAAATGTACATAGTCAAATTCAAGATATTTGTAGAGTTATGGATGATATTCTGGTTCCAGATGCAGGAAAGGAAAAACCAATAATAAAGCTCGACAGCACACCAGTCAAGGAGAGCACACGTCGCAGCGGCCTTAGT
TTTGCTGTAGGCGGAAGCAGGACATGTTCAATTCCAGACACCACTGCTGTTGCCGCAACTCGGCCCATCAAAAGTGTGGAATTGTCTAATGCTTTGAAGGAGCGCATTGGATATACTCTTGAATTGAGGACATCGAAAATATGCCATGAAGAAGCAGGTCAAGGCCTCTATTTGAGTGGAAAAGCTGGGATTGGGGCTGT
TGTCTCATTTTACCCTGGGgtaatatattctccatttaattattgttccatccctggatatccacgagttgatgctggaaatccctatttgatttcaaggtatgatggaattgttatagATGCTCAACCTTGGGGAACTGGTGGCGAAGCTCGTCAATTATGGGATGGCTTTTTTGATAAGAGAATGGCAAAATCCTCTG
GAAACAGTAAAGAAACTAAGGTTGATGTTCTGTGGCGAGTGCTTAGTAAACCAGAGGAGAACAGGTCTTTGATAAAAGGTGCTGTTGTGGAGAGGAGGAATCCCTTTGCTTTAGGACATTTTGCAAATCATCCTGAAAAAGGAACACAACCAAATGTGATGGTTTGCCCCTATAATTTTTATTTACCTGAAACAAGGATG
AGGCCATACATTCCTAATTTAGTGTTTGGTAGCGATGAGGAAATAACCATGCAAAGGTATGGTTCATTCTGGCTAAAATCGACATCTGCAAATCATGAGAATTCAGTTCCTCCGGCAATTCGTACATTGGTCCTTGTGGCAACAAGGCCAATATGTGATGAAGAAATATTTCTCAACTATAGATTGAGTAACCCCAAAAA
GAGGCCCACTTGGTATCATCCAGTTGATGAGGATGAAGATCGGCGGAGGTGGAGCTGAATACATTGCATTGATAGAAAATAAGTCCAGTTCAGATATTATTCTTGATACATTATTCAGGAGGCTGAACAATAATGCTGGCTAAAGATCCGGGTCCCTCTTTTGCAATAGTAGACTAGCATTTTTCTATGATGGGATTATC
TAGTAGGCCTCTTTCGTGAAATGTACATTTGAAATGAGCACACGGTCTTCCACATATGACCTGTTTAGAAAGGCAGTCCAGGATTCTAGGTTTTTTAATTGTTTCAGGATTTTAGTCCTTGAAACTCTGCTTGATTTTTTTCCTTTTTAGAGGTCTGGCTGCTTTAGACTCTGGAAACATAACTCCCAATTTATGTTATA
GCCTGGGCTGGTAGTCTCTTATGACTGGTGGCTGAGATTATGCCCAAAAGTTAAGTTGTAGTAGTTGTGGAACTAACTCTCAATAAAGATGTCAATTCTCTCTCTAATCCTGATTGAATGGATGCAAGCGAACTTAAAATTAAGGAGTTGCAAAATCTATTGCAAGTTGTGGCCCACTTTATCTGAAGGCTACCTAGATA
GTAGTCAGCTTTGTTTGTTTAGCC