NA ----> NA
Intron 1 GTGCGTGGAC ... AAATATTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 16.13 | 26 | 6 | 4 |
| A2 | 30.43 | 24 | 10 | 11 |
| A3 | 9.09 | 10 | 1 | 1 |
| A4 | 30.77 | 18 | 7 | 9 |
| A5 | 4 | 12 | 0 | 1 |
| A6 | 16.67 | 5 | 1 | 1 |
| A7 | 14.29 | 9 | 1 | 2 |
| A8 | 16.67 | 15 | 3 | 3 |
| A9 | 22.58 | 12 | 4 | 3 |
| A10 | 29.41 | 12 | 2 | 8 |
>TRINITY_DN116198_c5_g1_i4 from sample A2 / Example spliced isoformAAATGAACCACATCAATAAGTTTCTAGTTGGATTATTTGGGTTACGGCATTTGGTAAGAGACATTTGGCATGCCTTTTGGTAAGATGAAGGGCATAAAGAATCAGGACAGTCTAGAACTAACTACAACATGCCATAGCCTTGTAGAAACTGATGTAAAGTCCTGGAATTGTGTTTCTTTTGCTTATATTGTATATAGTTA
GTATTTGTTTACGAATACATATTACTTAGATGAGGATGACATATATTCTATACTAAGGTTTTTGTTGAGGGCTTTGCAGGTTTTTGCATTTGGATCTGTGCCACTGAAAACATATCTTTCTGATGGAGACATTGATTTGACTGCTTTTGGCAATCATCAACAGCTTACAAATGCATGGGCAAATGAAGTGCGTTCTGCCC
TTGAAGAAGAAGGGCGAAGCAAGGATGCTAAATTTAGAGTAAAAGATGTTCAGTACATACATGCTGCTGAGGTGAAGCTAGTGAAATGTATTGTTGAAAACATTGTTGTAGACATCTCCTTCAATCAGCTTGGAGGACTTTGCACCCTTTGCTTTCTTGAGCACGTAAGTGCCTTATATTTTCCAGTAGATCACATCCTA
CTTGTGGGTCATGTTGTCATTAGTGCATGTAATGATGCCAGTCTATTCAAAAGTTGCAATGTCCATTTGATGTTAATGTGACAAATTTACTTGTGAATTGATATACAAACCCCGTCTGTAGGTTAATCTATTGATTGGGAAGAGACACTTATTCAAACGTAGTATTATACTTGTTAAAGCATGGTGCTATTATGAAAGCC
GTCTTCTTGGTGCTCATCATGGACTTATTTCAACGTATGCTTTGGAGACATTGGTCCTGTACATTTTTCATCTTTTCCATGCATCACTACGGGGTCCTCTGGAGGTTTTATTTAGGTTTCTGGATTATTTTAGTAAGTTCGATTGGGACAATTATTGTGTCAGCATACAGGGTCCTGTTCCCATCGCCTCTCTTCCACAA
ATAGCGGCTGAACAACCTCAGACAGATGGAGGCAAACTGTTGCTTAGCAAGGAATTTCTGAAGACATGCATTGATAGGTACTCTGATGTTCCAAACAGCCATGATAGTAATAGTCGACTATTCAGCTCCAAATTCTTGAATATAGTTGATCCATTACGTGAAAATAATAATCTTGGGCGGAGTGTGAGCAAAGCAAATTT
CTATCGTATACGAAGTGCATTTGGATATGGAGCTCGCAAATTGGCAAAGATTCTACAATCTCCTGAAGGAAAGATTGCTGCAGAACTGGATTGTTTTTTCCCCATTACTTGGGAGAGGCATGCAAGTGGACAACGTCAAGATGTTCCAGACTCAATATCATGGGCATTGGAATGCAGGTTTTCTGTGGAAAATGCAAGCT
TCATTTCATTTTCAGAGTCAAGTGTTGAGAATGATAAGCAAGATACAAAGGATAATGCTTCAACTGAGGGAAATGGATCTCAATATGGAGAAACGGTTGGCCAAACTAGTAATTTAAAATCTGAAACTATCAAGATTGATAAGAGTTTAATTTCATCCTCTGCTGGAGACATGTCCATAATGGCACAAAGTAATGGCACC
GACTTGAACATTGTTGAAACCAAGAGCGATGATGCATCATTTAAAGAGCAGGAAGCAGCATTAGCAGCCCATGAATTCCCATATAAATTTTCCCCAAGCTTAGTGGTTCAACCTAACCTTAGTCCCCACTATCCAACACAAAATACTGAAACGATGTTTCTTTCACCAAAATCAAATACTGAAACCTCCCAAGTAAATGA
CATTTCAGCTCTCAGTTCAAATCTGTCCCACCTTCCCATGGTAACTGAAAGCACAGATTCTAACCCCTATGCATATCAGCCTACTATTATACCATTTTCTTCGACCAATATATATAATTCTACGTATCCAATTCAACCTGCTGTGGAAGTAGGAGGAGCTTCATATAAATCCCAAGGTAGAAATTTTGAAAATGCCAATG
AAGTTATCAGGAAGAAAAGTTTAAGGGATCAGCAAGCTAGCAAAAGCACAGAGACTGGACCTATGCAGAAGATAGAAATTGTAGTTCCTGATCCAAGGTTGGAGAGCAGGTCAACTGAGGCTGTAGTCGATGCCTTGAGTAGTCCAAGTTCTGATCTCCTCACTGGTGATTTTGAAAATCACTTGAACAATCTTGCTCAT
GGAAGATCATGCCAAAATCCTGTTTGGCATGGTTATATTGCACAATCTCCAGTTCTGCCTCCGTATGCCCATGAACACCTGCTATGGGAAGGTCCCGGAAGACCTGTTCATCCTAACATGAGTATGCCCTCTCACATGCATGGCCGGGGTGTTGTTCCCAGATATCCATATTTTCCGGTTGGTTATCGAGGAGCAAATCC
TCCAGTCCTGCCAGGGACCTTCAATGTTGAGGAAATGCCAAGGCCAAGAAGTGGAACGGGAACATACTTACCGAATCTGAACTATCATTCCTCTAGAGAGAAAAACTTTTCTAAAGGTAAGCATCAACATGGCATACTTGCACATGATTCTACTGCTCGAGAGGGTGGTGCCCACCATAGTAGTAGCAGAAGTCAAGTGG
GATACAATTCAGGATCATCCTGGCAGATTGGAATAGAAAGACTGCACAAGAGTTCATATCTGCCAATTTCTCATGCAGTGATGAGGAACACAGCTGTGGCCTCACAACCAGGATCAGGGGCTCCAGGGCCGCACTCGCTGTCTCGTGTTAGTGTCCAGGAGGCACCTTCGTTTACAGCAGTTAGCCCATCTGGTCCTCCA
TTTGTCACACGTTACCCCTTTTCAAATGGTACTACTTTTCCATCTGATCCACCAGAGTTAGAAACACTTGGACCAGTACAATTCAGTAATGATCGCGTGAGATCAGAGTCAGGGGAGCACGTTAGCTCTGTGCTGAATGAGCAATCTTACAAGTCTGGTGCAGCAGCTCCCTTACCTTCTTCCAGTGAGAGGGAACTGCA
GCAACCAGCTGCCGCTCTCAAGCAAGACAGGGCAGCACCACGGAATTACCAAATGAAGGAAGAAGATTTCAGCCACCTTCTTGCCAGTGAGAGGGGACTGCAGCAACCAGCTGCCGCTTTGAAGCAGGACAGGGCAGCACCACAGAGTTACCAGATGAAGGAAGAAGATTTCCCTCCACTTTCTGTCCAAGGGCAACATA
AGGGCAGTTCAGCCACTGCTGGAAATGGTCATAGTTGCAATGATAGAAGTTAACATAGTTAAGCCCTTGTTGTAACTTGTATAACTCTTTCATCATAGTTTAACTCAAGTGAGATAAGAGCCAGGGGGCCACGTTAGCTCTGTGCTGAATGAGCAATCTTACAAGTCTGGTGCAGCAGCTCCCTTACCTTCTTCCAGTGA
GAGGGAACTGCAGCAACCAGCTGCCGCTCTCAAGCAAGACAGGTATGACATAAAGAAAGACCATTCTTTTATGCTCAA
>TRINITY_DN116198_c5_g1_i6 from sample A2 / Example unspliced isoform:TAATCTATTGATTGGGAAGAGACACTTATTCAAACGTAGTATTATACTTGTTAAAGCATGGTGCTATTATGAAAGCCGTCTTCTTGGTGCTCATCATGGACTTATTTCAACGTATGCTTTGGAGACATTGGTCCTGTACATTTTTCATCTTTTCCATGCATCACTACGGGGTCCTCTGGAGgtgcgtggacatatcagtg
acatatatttcctttgctagatgctagaaataacaggacatcaaatattcagGTTTTATTTAGGTTTCTGGATTATTTTAGTAAGTTCGATTGGGACAATTATTGTGTCAGCATACAGGGTCCTGTTCCCATCGCCTCTCTTCCACAAATAGCGGCTGAACAACCTCAGACAGATGGAGGCAAACTGTTGCTTAGCAAGG
AATTTCTGAAGACATGCATTGATAGGTACTCTGATGTTCCAAACAGCCATGATAGTAATAGTCGACTATTCAGCTCCAAATTCTTGAATATAGTTGATCCATTACGTGAAAATAATAATCTTGGGCGGAGTGTGAGCAAAG
Intron 2 GTATGACATA ... TAATATCCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 6.67 | 14 | 0 | 1 |
| A2 | 7.69 | 12 | 0 | 1 |
| A3 | 20.69 | 23 | 0 | 6 |
| A4 | 3.7 | 26 | 0 | 1 |
| A5 | 8.33 | 11 | 0 | 1 |
| A6 | 10.98 | 73 | 0 | 9 |
| A7 | 5.13 | 37 | 0 | 2 |
| A8 | 8.25 | 89 | 0 | 8 |
| A9 | 14.29 | 66 | 0 | 11 |
| A10 | 19.51 | 33 | 0 | 8 |
>TRINITY_DN41619_c0_g1_i8 from sample A9 / Example spliced isoformTGATGCCAGTCTATTCAAAAGTTGCAATGTCCATTTGATGTTAATGTGACAAATTTACTTGTGAATTGATATACAAACCCCGTCTGTAGGTTAATCTATTGATTGGGAAGAGACACTTATTCAAACGTAGTATTATACTTGTTAAAGCATGGTGCTATTATGAAAGCCGTCTTCTTGGTGCTCATCATGGACTTATTTCA
ACGTATGCTTTGGAGACATTGGTCCTGTACATTTTTCATCTTTTCCATGCATCACTACGGGGTCCTCTGGAGGTTTTATTTAGGTTTCTGGATTATTTTAGTAAGTTCGATTGGGACAATTATTGTGTCAGCATACAGGGTCCTGTTCCCATCGCCTCTCTTCCACAAATAGCGGCTGAACAACCTCAGACAGATGGAGG
CAAACTGTTGCTTAGCAAGGAATTTCTGAAGACATGCATTGATAGGTACTCTGATGTTCCAAACAGCCATGATAGTAATAGTCGACTATTCAGCTCCAAATTCTTGAATATAGTTGATCCATTACGTGAAAATAATAATCTTGGGCGGAGTGTGAGCAAAGCAAATTTCTATCGTATACGAAGTGCATTTGGATATGGAG
CTCGCAAATTGGCAAAGATTCTACAATCTCCTGAAGGAAAGATTGCTGCAGAACTGGATTGTTTTTTCCCCATTACTTGGGAGAGGCATGCAAGTGGACAACGTCAAGATGTTCCAGACTCAATATCATGGGCATTGGAATGCAGGTTTTCTGTGGAAAATGCAAGCTTCATTTCATTTTCAGAGTCAAGTGTTGAGAAT
GATAAGCAAGATACAAAGGATAATGCTTCAACTGAGGGAAATGGATCTCAATATGGAGAAACGGTTGGCCAAACTAGTAATTTAAAATCTGAAACTATCAAGATTGATAAGAGTTTAATTTCATCCTCTGCTGGAGACATGTCCATAATGGCACAAAGTAATGGCACCGACTTGAACATTGTTGAAACCAAGAGCGATGA
TGCATCATTTAAAGAGCAGGAAGCAGCATTAGCAGCCCATGAATTCCCATATAAATTTTCCCCAAGCTTAGTGGTTCAACCTAACCTTAGTCCCCACTATCCAACACAAAATACTGAAACGATGTTTCTTTCACCAAAATCAAATACTGAAACCTCCCAAGTAAATGACATTTCAGCTCTCAGTTCAAATCTGTCCCACC
TTCCCATGGTAACTGAAAGCACAGATTCTAACCCCTATGCATATCAGCCTACTATTATACCATTTTCTTCGACCAATATATATAATTCTACGTATCCAATTCAACCTGCTGTGGAAGTAGGAGGAGCTTCATATAAATCCCAAGGTAGAAATTTTGAAAATGCCAATGAAGTTATCAGGAAGAAAAGTTTAAGGGATCAG
CAAGCTAGCAAAAGCACAGAGACTGGACCTATGCAGAAGATAGAAATTGTAGTTCCTGATCCAAGGTTGGAGAGCAGGTCAACTGAGGCTGTAGTCGATGCCTTGAGTAGTCCAAGTTCTGATCTCCTCACTGGTGATTTTGAAAATCACTTGAACAATCTTGCTCATGGAAGATCATGCCAAAATCCTGTTTGGCATGG
TTATATTGCACAATCTCCAGTTCTGCCTCCGTATGCCCATGAACACCTGCTATGGGAAGGTCCCGGAAGACCTGTTCATCCTAACATGAGTATGCCCTCTCACATGCATGGCCGGGGTGTTGTTCCCAGATATCCATATTTTCCGGTTGGTTATCGAGGAGCAAATCCTCCAGTCCTGCCAGGGACCTTCAATGTTGAGG
AAATGCCAAGGCCAAGAAGTGGAACGGGAACATACTTACCGAATCTGAACTATCATTCCTCTAGAGAGAAAAACTTTTCTAAAGGTAAGCATCAACATGGCATACTTGCACATGATTCTACTGCTCGAGAGGGTGGTGCCCACCATAGTAGTAGCAGAAGTCAAGTGGGATACAATTCAGGATCATCCTGGCAGATTGGA
ATAGAAAGACTGCACAAGAGTTCATATCTGCCAATTTCTCATGCAGTGATGAGGAACACAGCTGTGGCCTCACAACCAGGATCAGGGGCTCCAGGGCCGCACTCGCTGTCTCGTGTTAGTGTCCAGGAGGCACCTTCGTTTACAGCAGTTAGCCCATCTGGTCCTCCATTTGTCACACGTTACCCCTTTTCAAATGGTAC
TACTTTTCCATCTGATCCACCAGAGTTAGAAACACTTGGACCAGTACAATTCAGTAATGATCGCGTGAGATCAGAGTCAGGGGAGCACGTTAGCTCTGTGCTGAATGAGCAATCTTACATGTCTGGTGCAGCAGCTCCCTTACCTTCTGCCAGTGAGAGGGGACTGCAGCAACCAGCTGCCGCTTTGAAGCAGGACAGGG
CAGCACCACAGAGTTACCAGATGAAGGAAGAAGATTTCCCTCCACTTTCTGTCCAAGGGCAACATAAGGGCAGTTCAGCCACTGCTGGAAATGGTCATAGTTGCAATGATAGAAGTTAACATAGTTAAGCCCTTGTTGTAACTTGTATAACTCTTTCATCATAGTTTAACTCAAGTGAGATAAGAGCCAGGGGGCCACGT
TAGCTCTGTGCTGAATGAGCAATCTTACATGTCTGGTGCAGCAGCTCCCTTACCTTCTTCCAGTGAGAGGGAACTGCAGCAACCAGCTGCCGCTCTCAAGCAAGACAGGGCAGCACCACGGAATTACCAAATGAAGGAAGAAGATTTCAGCCACCTTCTTTCCAAGGGCAACATAAGGGCAGTTCAGCCACTGCTGGAAA
TGGTCATAATTGCAATGGTAGAAGTTCACAGAGTTAAGCTTTTGTTGTAACTTTTTCATCATAGTTTTTTAATTCATGTTCAACTGCCTGATTGAGCTGCTTTCAATGCTCTGTCTAAATTCAGGCAGGAGCAGCAGCCAAAAGGTTTCTGTATATCCGATTGGTTAAATTTGGATTTAATTTATGTCTAGTTTATAGAC
TGTAAAGTTGTTGCCCAATTTCATTCGATAACATGCCCAGCCCATTTTTTAAGGGCTTTAAGTCAGAATAACACCTGCCAGTGAACTGGAAATGGAAAGAAATTGTTGATGTTGTTGAGATTCTGCTGCCACCACATTCTACTTGTCTGTTGTGTATCCTATCTTGGTTACACTTACGGAATTCTACTTGTCATAGTAGT
CTGAAGGCGCCGGCTGCTTTTGAGTGTTTTACCAGCGGGGATTTTAACCATTTTTTATTAATTACTCGTACATTTTTTTGTGAATTTGAATTTGTTTAATGAAAAGTTACATTTGATTAGAACATCGTGATGTTCATGAAGCTTTGATCGAGAGGAAATATCCGAGAGTGCAGGCAAAATGGGCTTGGCTTCTTGGAATG
CATAGGAGATAAAATGGGTATTTTTTTTTTCTGGATATGTGTTCATTGCATTCTTTAGTTCTACCTAATTGCTGTCCTGATTATTTCAAATAGAAGTTCATGATCAGGCCTGATCTGGCCAAAACTGTAGCTCTTGTTGCAAGTATGTGTAAGCCTTGAAGCATATAAAATTACCAGATGAATGGATTTTGGAATGGAAC
TCTTATTATCCATTCTAATCGCTTGCCACATTTATTTAAATCTATTGGATTAAAATTCACAGGTATTGAATCAGAGTTCTTTTTCTCGGAGTAATTTCATGGGTAATAACAGTTTAGGATGC
>TRINITY_DN41619_c0_g1_i7 from sample A9 / Example unspliced isoform:CTGCCGCTCTCAAGCAAGACAGgtatgacataaagaaagaccattcttttatgctcaatttaataacccttttatgcagaacctgttttctctgtatacagacttgagtttggttactttgggtaatttgcatatgtattatctgtcgcaacttcttgtttgttttacatttgatacttaacactgggtttacgataatt
ttattcttctaatatccagGGCAGCACCACGGAATTACCAAATGAAGGAAGAAGATTTCAGCCACCTTCTTTCCAAGGGCAACATAAGGGCAGTTCAGCCACTGCTGGAAATGGTCATAATTGCAATGGTAGAAGTTCACAGAGTTAAGCTTTTGTTGTAACTTTTTCATCATAGTTTTTTAATTCATGTTCAACTGCCT
GATTGAGCTGCTTTCAATGCTCTGTCTAAATTCAGGCAGGAGCAGCAGCCAAAAGGTTTCTGTATATCCGATTGGTTAAATTTGGATTTAATTTATGTCTAGTTTATAGACTGTAAAGTTGTTGCCCAATTTCATTCGATAACATGCCCAGCCCATTTTTTAAGGGCTTTAAGTCAGAATAACACCTGCCAGTGAACTGG
AAATGGAAAGAAATTGTTGATGTTGTTGAGATTCTGCTGCCACCACATTCTACTTGTCTGTTGTGTATCCTATCTTGGTTACACTTACGGAATTCTACTTGTCATAGTAGTCTGAAGGCGCCGGCTGCTTTTGAGTGTTTTACCAGCGGGGATTTTAACCATTTTTTATTAATTACTCGTACATTTTTTTGTGAATTTGA
ATTTGTTTAATGAAAAGTTACATTTGATTAGAACATCGTGATGTTCATGAAGCTTTGATCGAGAGGAAATATCCGAGAGTGCAGGCAAAATGGGCTTGGCTTCTTGGAATGCATAGGAGATAAAATGGGTATTTTTTTTTTCTGGATATGTGTTCATTGCATTCTTTAGTTCTACCTAATTGCTGTCCTGATTATTTCAA
ATAGAAGTTCATGATCAGGCCTGATCTGGCCAAAACTGTAGCTCTTGTTGCAAGTATGTGTAAGCCTTGAAGCATATAAAATTACCAGATGAATGGATTTTGGAATGGAACTCTTATTATCCATTCTAATCGCTTGCCACATTTATTTAAATCTATTGGATTAAAATTCACAGGTATTGAATCAGAGTTCTTTTTCTCGG
AGTAATTTCATGGGTAATAACAGTTTAGGATGC
Intron 3 GTATGACATA ... TAATATCTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 23.08 | 15 | 5 | 4 |
| A2 | 21.21 | 13 | 3 | 4 |
| A3 | 30.3 | 23 | 10 | 10 |
| A4 | 15.07 | 31 | 8 | 3 |
| A5 | 12.5 | 14 | 4 | 0 |
| A6 | 15.66 | 70 | 12 | 14 |
| A7 | 8.62 | 53 | 6 | 4 |
| A8 | 10.47 | 77 | 7 | 11 |
| A9 | 9.09 | 65 | 6 | 7 |
| A10 | 17.53 | 40 | 9 | 8 |
>TRINITY_DN37542_c0_g1_i4 from sample A6 / Example spliced isoformTGAGCACAGAGATTAGCGGAAACTGAACTAACTTGTAGAGAGAAAACATAAAAGTTAGTTTGCATGGGCAATCTGGACAGTTCAAAGGGAAATTTAACAGAAGAAGAATGTCCACCTTCGGCTAACCCTTTGCCCACTGCCATTGATGTTGGCATCGAGGGCTGGGATAAAGCTGAGCTTAGGACTGGAGAACTTATTTC
TCAAATTCAACCAACTGTTATTTCAGAGAATCGAAGGAAGGCTGTTGTTCAATATGTTCAACATCTTGTTCGCCGATGTATTGGATGTGAGGTTTTTGCATTTGGATCTGTGCCACTGAAAACATATCTTTCTGATGGAGACATTGATTTGACTGCTTTTGGCAATCATCAACAGCTTACAAATGCATGGGCAAATGAAG
TGCGTTCTGCCCTTGAAGAAGAAGGGCGAAGCAAGGATGCTAAATTTAGAGTAAAAGATGTTCAGTACATACATGCTGCTGAGGTGAAGCTAGTGAAATGTATTGTTGAAAACATTGTTGTAGACATCTCCTTCAATCAGCTTGGAGGACTTTGCACCCTTTGCTTTCTTGAGCACGTTAATCTATTGATTGGGAAGAGA
CACTTATTCAAACGTAGTATTATACTTGTTAAAGCATGGTGCTATTATGAAAGCCGTCTTCTTGGTGCTCATCATGGACTTATTTCAACGTATGCTTTGGAGACATTGGTCCTGTACATTTTTCATCTTTTCCATGCATCACTACGGGGTCCTCTGGAGGTTTTATTTAGGTTTCTGGATTATTTTAGTAAGTTCGATTG
GGACAATTATTGTGTCAGCATACAGGGTCCTGTTCCCATCGCCTCTCTTCCACAAATAGCGGCTGAACAACCTCAGACAGATGGAGGCAAACTGTTGCTTAGCAAGGAATTTCTGAAGACATGCATTGATAGGTACTCTGATGTTCCAAACAGCCATGATAGTAATAGTCGACTATTCAGCTCCAAATTCTTGAATATAG
TTGATCCATTACGTGAAAATAATAATCTTGGGCGGAGTGTGAGCAAAGCAAATTTCTATCGTATACGAAGTGCATTTGGATATGGAGCTCGCAAATTGGCAAAGATTCTACAATCTCCTGAAGGAAAGATTGCTGCAGAACTGGATTGTTTTTTCCCCATTACTTGGGAGAGGCATGCAAGTGGACAACGTCAAGATGTT
CCAGACTCAATATCATGGGCATTGGAATGCAGGTTTTCTGTGGAAAATGCAAGCTTCATTTCATTTTCAGAGTCAAGTGTTGAGAATGATAAGCAAGATACAAAGGATAATGCTTCAACTGAGGGAAATGGATCTCAATATGGAGAAACGGTTGGCCAAACTAGTAATTTAAAATCTGAAACTATCAAGATTGATAAGAG
TTTAATTTCATCCTCTGCTGGAGACATGTCCATAATGGCACAAAGTAATGGCACCGACTTGAACATTGTTGAAACCAAGAGCGATGATGCATCATTTAAAGAGCAGGAAGCAGCATTAGCAGCCCATGAATTCCCATATAAATTTTCCCCAAGCTTAGTGGTTCAACCTAACCTTAGTCCCCACTATCCAACACAAAATA
CTGAAACGATGTTTCTTTCACCAAAATCAAATACTGAAACCTCCCAAGTAAATGACATTTCAGCTCTCAGTTCAAATCTGTCCCACCTTCCCATGGTAACTGAAAGCACAGATTCTAACCCCTATGCATATCAGCCTACTATTATACCATTTTCTTCGACCAATATATATAATTCTACGTATCCAATTCAACCTGCTGTG
GAAGTAGGAGGAGCTTCATATAAATCCCAAGGTAGAAATTTTGAAAATGCCAATGAAGTTATCAGGAAGAAAAGTTTAAGGGATCAGCAAGCTAGCAAAAGCACAGAGACTGGACCTATGCAGAAGATAGAAATTGTAGTTCCTGATCCAAGGTTGGAGAGCAGGTCAACTGAGGCTGTAGTCGATGCCTTGAGTAGTCC
AAGTTCTGATCTCCTCACTGGTGATTTTGAAAATCACTTGAACAATCTTGCTCATGGAAGATCATGCCAAAATCCTGTTTGGCATGGTTATATTGCACAATCTCCAGTTCTGCCTCCGTATGCCCATGAACACCTGCTATGGGAAGGTCCCGGAAGACCTGTTCATCCTAACATGAGTATGCCCTCTCACATGCATGGCC
GGGGTGTTGTTCCCAGATATCCATATTTTCCGGTTGGTTATCGAGGAGCAAATCCTCCAGTCCTGCCAGGGACCTTCAATGTTGAGGAAATGCCAAGGCCAAGAAGTGGAACGGGAACATACTTACCGAATCTGAACTATCATTCCTCTAGAGAGAAAAACTTTTCTAAAGGTAAGCATCAACATGGCATACTTGCACAT
GATTCTACTGCTCGAGAGGGTGGTGCCCACCATAGTAGTAGCAGAAGTCAAGTGGGATACAATTCAGGATCATCCTGGCAGATTGGAATAGAAAGACTGCACAAGAGTTCATATCTGCCAATTTCTCATGCAGTGATGAGGAACACAGCTGTGGCCTCACAACCAGGATCAGGGGCTCCAGGGCCGCACTCGCTGTCTCG
TGTTAGTGTCCAGGAGGCACCTTCGTTTACAGCAGTTAGCCCATCTGGTCCTCCATTTGTCACACGTTACCCCTTTTCAAATGGTACTACTTTTCCATCTGATCCACCAGAGTTAGAAACACTTGGACCAGTACAATTCAGTAATGATCGCGTGAGATCAGAGTCAGGGGAGCACGTTAGCTCTGTGCTGAATGAGCAAT
CTTACATGTCTGGTGCAGCAGCTCCCTTACCTTCTGCCAGTGAGAGGGGACTGCAGCAACCAGCTGCCGCTTTGAAGCAGGACAGGGCAGCACCACAGAGTTACCAGATGAAGGAAGAAGATTTCCCTCCACTTTCTGTCCAAGGGCAACATAAGGGCAGTTCAGCCACTGCTGGAAATGGTCATAGTTGCAATGATAGA
AGTTAACATAGTTAAGCCCTTGTTGTAACTTGTATAACTCTTTCATCATAGTTTAACTCAAGTGAGATAAGAGCCAGGGGGCCACGTTAGCTCTGTGCTGAATGAGCAATCTTACATGTCTGGTGCAGCAGCTCCCTTACCTTCTTCCAGTGAGAGGGAACTGCAGCAACCAGCTGCCGCTCTCAAGCAAGACAGGGCAG
CACCACGGAATTACCAAATGAAGGAAGAAGATTTCAGCCACCTTCTTTCCAAGGGCAACATAAGGGCAGTTCAGCCACTGCTGGAAATGGTCATAATTGCAATGGTAGAAGTTCACAGAGTTAAGCTTTTGTTGTAACTTTTTCATCATAGTTTTTTAATTCATGTTCAACTGCCTGATTGAGCTGCTTTCAATGCTCTG
TCTAAATTCAGGCAGGAGCAGCAGCCAAAAGGTTTCTGTATATCCGATTGGTTAAATTTGGATTTAATTTATGTCTAGTTTATAGACTGTAAAGTTGTTGCCCAATTTCATTCGATAACATGCCCAGCCCATTTTTTAAGGGCTTTAAGTCAGAATAACACCTGCCAGTGAACTGGAAATGGAAAGAAATTGTTGATGTT
GTTGAGATTCTGCTGCCACCACATTCTACTTGTCTGTTGTGTATCCTATCTTGGTTACACTTACGGAATTCTACTTGTCATAGTAGTCTGAAGGCGCCGGCTGCTTTTGAGTGTTTTACCAGCGGGGATTTTAACCATTTTTTATTAATTACTCGTACATTTTTTTGTGAATTTGAATTTGTTTAATGAAAAGTTACATT
TGATTAGAACATCGTGATGTTCATGAAGCTTTGATCGAGAGGAAATATCCGAGAGTGCAGGCAAAATGGGCTTGGCTTCTTGGAATGCATAGGAGATAAAATGGGTATTTTTTTTTTCTGGATATGTGTTCATTGCATTCTTTAGTTCTACCTAATTGCTGTCCTGATTATTTCAAATAGAAGTTCATGATCAGGCCTGA
TCTGGCCAAAACTGTAGCTCTTGTTGCAAGTATGTGTAAGCCTTGAAGCATATAAAATTACCAGATGAATGGATTTTGGAATGGAACTCTTATTATCCATTCTAATCGCTTGCCACATTTATTTAAATCTATTGGATTAAAATTCACAGGTATTGAATCAGAG
>TRINITY_DN37542_c0_g1_i2 from sample A6 / Example unspliced isoform:TGAGCACAGAGATTAGCGGAAACTGAACTAACTTGTAGAGAGAAAACATAAAAGTTAGTTTGCATGGGCAATCTGGACAGTTCAAAGGGAAATTTAACAGAAGAAGAATGTCCACCTTCGGCTAACCCTTTGCCCACTGCCATTGATGTTGGCATCGAGGGCTGGGATAAAGCTGAGCTTAGGACTGGAGAACTTATTTC
TCAAATTCAACCAACTGTTATTTCAGAGAATCGAAGGAAGGCTGTTGTTCAATATGTTCAACATCTTGTTCGCCGATGTATTGGATGTGAGGTTTTTGCATTTGGATCTGTGCCACTGAAAACATATCTTTCTGATGGAGACATTGATTTGACTGCTTTTGGCAATCATCAACAGCTTACAAATGCATGGGCAAATGAAG
TGCGTTCTGCCCTTGAAGAAGAAGGGCGAAGCAAGGATGCTAAATTTAGAGTAAAAGATGTTCAGTACATACATGCTGCTGAGGTGAAGCTAGTGAAATGTATTGTTGAAAACATTGTTGTAGACATCTCCTTCAATCAGCTTGGAGGACTTTGCACCCTTTGCTTTCTTGAGCACGTTAATCTATTGATTGGGAAGAGA
CACTTATTCAAACGTAGTATTATACTTGTTAAAGCATGGTGCTATTATGAAAGCCGTCTTCTTGGTGCTCATCATGGACTTATTTCAACGTATGCTTTGGAGACATTGGTCCTGTACATTTTTCATCTTTTCCATGCATCACTACGGGGTCCTCTGGAGGTTTTATTTAGGTTTCTGGATTATTTTAGTAAGTTCGATTG
GGACAATTATTGTGTCAGCATACAGGGTCCTGTTCCCATCGCCTCTCTTCCACAAATAGCGGCTGAACAACCTCAGACAGATGGAGGCAAACTGTTGCTTAGCAAGGAATTTCTGAAGACATGCATTGATAGGTACTCTGATGTTCCAAACAGCCATGATAGTAATAGTCGACTATTCAGCTCCAAATTCTTGAATATAG
TTGATCCATTACGTGAAAATAATAATCTTGGGCGGAGTGTGAGCAAAGCAAATTTCTATCGTATACGAAGTGCATTTGGATATGGAGCTCGCAAATTGGCAAAGATTCTACAATCTCCTGAAGGAAAGATTGCTGCAGAACTGGATTGTTTTTTCCCCATTACTTGGGAGAGGCATGCAAGTGGACAACGTCAAGATGTT
CCAGACTCAATATCATGGGCATTGGAATGCAGGTTTTCTGTGGAAAATGCAAGCTTCATTTCATTTTCAGAGTCAAGTGTTGAGAATGATAAGCAAGATACAAAGGATAATGCTTCAACTGAGGGAAATGGATCTCAATATGGAGAAACGGTTGGCCAAACTAGTAATTTAAAATCTGAAACTATCAAGATTGATAAGAG
TTTAATTTCATCCTCTGCTGGAGACATGTCCATAATGGCACAAAGTAATGGCACCGACTTGAACATTGTTGAAACCAAGAGCGATGATGCATCATTTAAAGAGCAGGAAGCAGCATTAGCAGCCCATGAATTCCCATATAAATTTTCCCCAAGCTTAGTGGTTCAACCTAACCTTAGTCCCCACTATCCAACACAAAATA
CTGAAACGATGTTTCTTTCACCAAAATCAAATACTGAAACCTCCCAAGTAAATGACATTTCAGCTCTCAGTTCAAATCTGTCCCACCTTCCCATGGTAACTGAAAGCACAGATTCTAACCCCTATGCATATCAGCCTACTATTATACCATTTTCTTCGACCAATATATATAATTCTACGTATCCAATTCAACCTGCTGTG
GAAGTAGGAGGAGCTTCATATAAATCCCAAGGTAGAAATTTTGAAAATGCCAATGAAGTTATCAGGAAGAAAAGTTTAAGGGATCAGCAAGCTAGCAAAAGCACAGAGACTGGACCTATGCAGAAGATAGAAATTGTAGTTCCTGATCCAAGGTTGGAGAGCAGGTCAACTGAGGCTGTAGTCGATGCCTTGAGTAGTCC
AAGTTCTGATCTCCTCACTGGTGATTTTGAAAATCACTTGAACAATCTTGCTCATGGAAGATCATGCCAAAATCCTGTTTGGCATGGTTATATTGCACAATCTCCAGTTCTGCCTCCGTATGCCCATGAACACCTGCTATGGGAAGGTCCCGGAAGACCTGTTCATCCTAACATGAGTATGCCCTCTCACATGCATGGCC
GGGGTGTTGTTCCCAGATATCCATATTTTCCGGTTGGTTATCGAGGAGCAAATCCTCCAGTCCTGCCAGGGACCTTCAATGTTGAGGAAATGCCAAGGCCAAGAAGTGGAACGGGAACATACTTACCGAATCTGAACTATCATTCCTCTAGAGAGAAAAACTTTTCTAAAGGTAAGCATCAACATGGCATACTTGCACAT
GATTCTACTGCTCGAGAGGGTGGTGCCCACCATAGTAGTAGCAGAAGTCAAGTGGGATACAATTCAGGATCATCCTGGCAGATTGGAATAGAAAGACTGCACAAGAGTTCATATCTGCCAATTTCTCATGCAGTGATGAGGAACACAGCTGTGGCCTCACAACCAGGATCAGGGGCTCCAGGGCCGCACTCGCTGTCTCG
TGTTAGTGTCCAGGAGGCACCTTCGTTTACAGCAGTTAGCCCATCTGGTCCTCCATTTGTCACACGTTACCCCTTTTCAAATGGTACTACTTTTCCATCTGATCCACCAGAGTTAGAAACACTTGGACCAGTACAATTCAGTAATGATCGCGTGAGATCAGAGTCAGGGGAGCACGTTAGCTCTGTGCTGAATGAGCAAT
CTTACATGTCTGGTGCAGCAGCTCCCTTACCTTCTGCCAGTGAGAGGGGACTGCAGCAACCAGCTGCCGCTTTGAAGCAGGACAGgtatgacataaagagagaccaatattttatgctcatatctaaaacttttaatacagaacctgttttggttactttgggtaatttgcagatgtattatctatcgcaacttcttgtt
tgttttacacttgtaacactgggtttacaatgatttgattgttctaatatctagGGCAGCACCACAGAGTTACCAGATGAAGGAAGAAGATTTCCCTCCACTTTCTGTCCAAGGGCAACATAAGGGCAGTTCAGCCACTGCTGGAAATGGTCATAGTTGCAATGATAGAAGTTAACATAGTTAAGCCCTTGTTGTAACTT
GTATAACTCTTTCATCATAGTTTAACTCAAGTGAGATAAGAGCCAGGGGGCCACGTTAGCTCTGTGCTGAATGAGCAATCTTACATGTCTGGTGCAGCAGCTCCCTTACCTTCTTCCAGTGAGAGGGAACTGCAGCAACCAGCTGCCGCTCTCAAGCAAGACAGGGCAGCACCACGGAATTACCAAATGAAGGAAGAAGA
TTTCAGCCACCTTCTTTCCAAGGGCAACATAAGGGCAGTTCAGCCACTGCTGGAAATGGTCATAATTGCAATGGTAGAAGTTCACAGAGTTAAGCTTTTGTTGTAACTTTTTCATCATAGTTTTTTAATTCATGTTCAACTGCCTGATTGAGCTGCTTTCAATGCTCTGTCTAAATTCAGGCAGGAGCAGCAGCCAAAAG
GTTTCTGTATATCCGATTGGTTAAATTTGGATTTAATTTATGTCTAGTTTATAGACTGTAAAGTTGTTGCCCAATTTCATTCGATAACATGCCCAGCCCATTTTTTAAGGGCTTTAAGTCAGAATAACACCTGCCAGTGAACTGGAAATGGAAAGAAATTGTTGATGTTGTTGAGATTCTGCTGCCACCACATTCTACTT
GTCTGTTGTGTATCCTATCTTGGTTACACTTACGGAATTCTACTTGTCATAGTAGTCTGAAGGCGCCGGCTGCTTTTGAGTGTTTTACCAGCGGGGATTTTAACCATTTTTTATTAATTACTCGTACATTTTTTTGTGAATTTGAATTTGTTTAATGAAAAGTTACATTTGATTAGAACATCGTGATGTTCATGAAGCTT
TGATCGAGAGGAAATATCCGAGAGTGCAGGCAAAATGGGCTTGGCTTCTTGGAATGCATAGGAGATAAAATGGGTATTTTTTTTTTCTGGATATGTGTTCATTGCATTCTTTAGTTCTACCTAATTGCTGTCCTGATTATTTCAAATAGAAGTTCATGATCAGGCCTGATCTGGCCAAAACTGTAGCTCTTGTTGCAAGT
ATGTGTAAGCCTTGAAGCATATAAAATTACCAGATGAATGGATTTTGGAATGGAACTCTTATTATCCATTCTAATCGCTTGCCACATTTATTTAAATCTATTGGATTAAAATTCACAGGTATTGAATCAGAG
Intron 4 GTAGTCACCT ... TTTATGGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 23.57 | 25.9 | 4.8 | 8 |
| A2 | 12.59 | 20.9 | 2.5 | 3 |
| A3 | 50.08 | 18.9 | 0 | 19 |
| A4 | 29.47 | 23.9 | 5.4 | 10 |
| A5 | 20.83 | 3.9 | 1.6 | 1 |
| A6 | 22.22 | 7 | 0 | 2 |
| A7 | 30 | 21 | 1.6 | 9 |
| A8 | 22.8 | 16.9 | 0 | 5 |
| A9 | 33.5 | 17.9 | 0.6 | 9 |
| A10 | 17.36 | 23.8 | 2.3 | 5 |
>TRINITY_DN116198_c5_g1_i6 from sample A2 / Example spliced isoformTAATCTATTGATTGGGAAGAGACACTTATTCAAACGTAGTATTATACTTGTTAAAGCATGGTGCTATTATGAAAGCCGTCTTCTTGGTGCTCATCATGGACTTATTTCAACGTATGCTTTGGAGACATTGGTCCTGTACATTTTTCATCTTTTCCATGCATCACTACGGGGTCCTCTGGAGGTGCGTGGACATATCAGTG
ACATATATTTCCTTTGCTAGATGCTAGAAATAACAGGACATCAAATATTCAGGTTTTATTTAGGTTTCTGGATTATTTTAGTAAGTTCGATTGGGACAATTATTGTGTCAGCATACAGGGTCCTGTTCCCATCGCCTCTCTTCCACAAATAGCGGCTGAACAACCTCAGACAGATGGAGGCAAACTGTTGCTTAGCAAGG
AATTTCTGAAGACATGCATTGATAGGTACTCTGATGTTCCAAACAGCCATGATAGTAATAGTCGACTATTCAGCTCCAAATTCTTGAATATAGTTGATCCATTACGTGAAAATAATAATCTTGGGCGGAGTGTGAGCAAAG
>TRINITY_DN116198_c5_g1_i12 from sample A2 / Example unspliced isoform:CAGGTTCTGAGAATATTTAAGAAGGGCTACTTGATTAAATTTTTATATGTAATGACTATCAAGTACTGATGCAGTAGTCAATGGACAGGTTTTATTTAGGTTTCTGGATTATTTTAGTAAGTTCGATTGGGACAATTATTGTGTCAGCATACAGGGTCCTGTTCCCATCGCCTCTCTTCCACAAATAGCGGgtagtcacc
tttgatttatttatacatagtagatttattgaccgggaatattaaattcaattttttagttttcatttttttttcattgatgctattttctttatggcagCTGAACAACCTCAGACAGATGGAGGCAAACTGTTGCTTAGCAAGGAATTTCTGAAGACATGCATTGATAGGTACTCTGATGTTCCAAACAGCCATGATAG
TAATAGTCGACTATTCAGCTCCAAATTCTTGAATATAGTTGATCCATTACGTGAAAATAATAATCTTGGGCGGAGTGTGAGCAAAGGTATTTTTGTTCTTACTTTCAATTTACATCGGGTCATATTCCATATATTGTAGTTGAATACCTTGCAATTCATTTTCCATGATAATTGATACCATAAGTTTCCTCTTCCATATT
GTTACAAATCAAGATATAAAAAATAGAATGCGAAACTTATAACAAAAAACTGAGAAGTATACATCTGGTTAATTATTCAATGTGAAATACATAGTTAAAAACAAATGGAC
Intron 5 GTAGAAGTTC ... CTAAATTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 83.61 | 5 | 28 | 23 |
| A2 | 53.85 | 3 | 4 | 3 |
| A3 | 76 | 9 | 28 | 29 |
| A4 | 51.35 | 9 | 11 | 8 |
| A5 | 77.78 | 1 | 4 | 3 |
| A6 | 65.17 | 31 | 57 | 59 |
| A7 | 65.67 | 23 | 41 | 47 |
| A8 | 72.88 | 24 | 58 | 71 |
| A9 | 69.12 | 21 | 42 | 52 |
| A10 | 60.92 | 17 | 31 | 22 |
>TRINITY_DN41640_c0_g1_i5 from sample A10 / Example spliced isoformAGGGCAGCACCACAGAGTTACCAGATGAAGGAAGAAGATTTCCCTCCACTTTCTGTCCAAGGGCAACATAAGGGCAGTTCAGCCACTGCTGGAAATGGTCATAGTTGCAATGATAGAAGTTAACATAGTTAAGCCCTTGTTGTAACTTGTATAACTCTTTCATCATAGTTTAACTCAAGTGAGATAAGAGCCAGGGGGCC
ACGTTAGCTCTGTGCTGAATGAGCAATCTTACAAGTCTGGTGCAGCAGCTCCCTTACCTTCTTCCAGTGATAGGGAACTGCAGCAACCAGCTGCCGCTCTCAAGCAAGACAGGGCAGCACCACGGAATTACCAAATGAAGGAAGAAGATTTCAGCCACCTTCTTTCCAAGGGCAACATAAGGGCAGTTCAGCCACTGCTG
GAAATGGTCATAATTGCAATGGCAGGAGCAGCAGCCAAAAGGTTTCTGTATATCCGATTGGTTAAATTTGGATTTAATTTATGTCTAGTTTATAGACTGTAAAGTTGTTGCCCAATTTCATTCGATAACATGCCCAGCCCATTTTTTAAGGGCTTTAAGTCAGAATAACACCTGCCAGTGAACTGGAAATGGAAAGAAAT
TGTTGATGTTGTTGAGATTCTGCTGCCACCACATTCTACTTGTCTGTTGTGTATCCTATCTTGGTTACACTTACGGAATTCTACTTGTCATAGTAGTCTGAAGGCGCCGGCTGCTTTTGAGTGTTTTACCAGCGGGGATTTTAACCATTTTTTATTAATTACTCGTACATTTTTTTGTGAATTTGAATTTGTTTAATGAA
AAGTTACATTTGATTAGAACATCGTGATGTTCATGAAGCTTTGATCGAGAGGAAATATCCGAGAGTGCAGGCAAAATGGGCTTGGCTTCTTGGAATGCATAGGAG
>TRINITY_DN41640_c0_g1_i13 from sample A10 / Example unspliced isoform:GTTAATCTATTGATTGGGAAGAGACACTTATTCAAACGTAGTATTATACTTGTTAAAGCATGGTGCTATTATGAAAGCCGTCTTCTTGGTGCTCATCATGGACTTATTTCAACGTATGCTTTGGAGACATTGGTCCTGTACATTTTTCATCTTTTCCATGCATCACTACGGGGTCCTCTGGAGGTTTTATTTAGGTTTCT
GGATTATTTTAGTAAGTTCGATTGGGACAATTATTGTGTCAGCATACAGGGTCCTGTTCCCATCGCCTCTCTTCCACAAATAGCGGACAGATGGAGGCAAACTGTTGCTTAGCAAGGAATTTCTGAAGACATGCATTGATAGGTACTCTGATGTTCCAAACAGCCATGATAGTAATAGTCGACTATTCAGCTCCAAATTC
TTGAATATAGTTGATCCATTACGTGAAAATAATAATCTTGGGCGGAGTGTGAGCAAAGCAAATTTCTATCGTATACGAAGTGCATTTGGATATGGAGCTCGCAAATTGGCAAAGATTCTACAATCTCCTGAAGGAAAGATTGCTGCAGAACTGGATTGTTTTTTCCCCATTACTTGGGAGAGGCATGCAAGTGGACAACG
TCAAGATGTTCCAGACTCAATATCATGGGCATTGGAATGCAGGTTTTCTGTGGAAAATGCAAGCTTCATTTCATTTTCAGAGTCAAGTGTTGAGAATGATAAGCAAGATACAAAGGATAATGCTTCAACTGAGGGAAATGGATCTCAATATGGAGAAACGGTTGGCCAAACTAGTAATTTAAAATCTGAAACTATCAAGA
TTGATAAGAGTTTAATTTCATCCTCTGCTGGAGACATGTCCATAATGGCACAAAGTAATGGCACCGACTTGAACATTGTTGAAACCAAGAGCGATGATGCATCATTTAAAGAGCAGGAAGCAGCATTAGCAGCCCATGAATTCCCATATAAATTTTCCCCAAGCTTAGTGGTTCAACCTAACCTTAGTCCCCACTATCCA
ACACAAAATACTGAAACGATGTTTCTTTCACCAAAATCAAATACTGAAACCTCCCAAGTAAATGACATTTCAGCTCTCAGTTCAAATCTGTCCCACCTTCCCATGGTAACTGAAAGCACAGATTCTAACCCCTATGCATATCAGCCTACTATTATACCATTTTCTTCGACCAATATATATAATTCTACGTATCCAATTCA
ACCTGCTGTGGAAGTAGGAGGAGCTTCATATAAATCCCAAGGTAGAAATTTTGAAAATGCCAATGAAGTTATCAGGAAGAAAAGTTTAAGGGATCAGCAAGCTAGCAAAAGCACAGAGACTGGACCTATGCAGAAGATAGAAATTGTAGTTCCTGATCCAAGGTTGGAGAGCAGGTCAACTGAGGCTGTAGTCGATGCCT
TGAGTAGTCCAAGTTCTGATCTCCTCACTGGTGATTTTGAAAATCACTTGAACAATCTTGCTCATGGAAGATCATGCCAAAATCCTGTTTGGCATGGTTATATTGCACAATCTCCAGTTCTGCCTCCGTATGCCCATGAACACCTGCTATGGGAAGGTCCCGGAAGACCTGTTCATCCTAACATGAGTATGCCCTCTCAC
ATGCATGGCCGGGGTGTTGTTCCCAGATATCCATATTTTCCGGTTGGTTATCGAGGAGCAAATCCTCCAGTCCTGCCAGGGACCTTCAATGTTGAGGAAATGCCAAGGCCAAGAAGTGGAACGGGAACATACTTACCGAATCTGAACTATCATTCCTCTAGAGAGAAAAACTTTTCTAAAGGTAAGCATCAACATGGCAT
ACTTGCACATGATTCTACTGCTCGAGAGGGTGGTGCCCACCATAGTAGTAGCAGAAGTCAAGTGGGATACAATTCAGGATCATCCTGGCAGATTGGAATAGAAAGACTGCACAAGAGTTCATATCTGCCAATTTCTCATGCAGTGATGAGGAACACAGCTGTGGCCTCACAACCAGGATCAGGGGCTCCAGGGCCGCACT
CGCTGTCTCGTGTTAGTGTCCAGGAGGCACCTTCGTTTACAGCAGTTAGCCCATCTGGTCCTCCATTTGTCACACGTTACCCCTTTTCAAATGGTACTACTTTTCCATCTGATCCACCAGAGTTAGAAACACTTGGACCAGTACAATTCAGTAATGATCGCGTGAGATCAGAGTCAGGGGAGCACGTTAGCTCTGTGCTG
AATGAGCAATCTTACAAGTCTGGTGCAGCAGCTCCCTTACCTTCTGCCAGTGAGAGGGGACTGCAGCAACCAGCTGCCGCTTTGAAGCAGGACAGGGCAGCACCACAGAGTTACCAGATGAAGGAAGAAGATTTCCCTCCACTTTCTGTCCAAGGGCAACATAAGGGCAGTTCAGCCACTGCTGGAAATGGTCATAGTTG
CAATGATAGAAGTTAACATAGTTAAGCCCTTGTTGTAACTTGTATAACTCTTTCATCATAGTTTAACTCAAGTGAGATAAGAGCCAGGGGGCCACGTTAGCTCTGTGCTGAATGAGCAATCTTACAAGTCTGGTGCAGCAGCTCCCTTACCTTCTTCCAGTGATAGGGAACTGCAGCAACCAGCTGCCGCTCTCAAGCAA
GACAGGGCAGCACCACGGAATTACCAAATGAAGGAAGAAGATTTCAGCCACCTTCTTTCCAAGGGCAACATAAGGGCAGTTCAGCCACTGCTGGAAATGGTCATAATTGCAATGgtagaagttcacagagttaagcttttgttgtaactttttcatcatagttttttaattcatgttcaactgcctgattgagctgcttt
caatgctctgtctaaattcagGCAGGAGCAGCAGCCAAAAGGTTTCTGTATATCCGATTGGTTAAATTTGGATTTAATTTATGTCTAGTTTATAGACTGTAAAGTTGTTGCCCAATTTCATTCGATAACATGCCCAGCCCATTTTTTAAGGGCTTTAAGTCAGAATAACACCTGCCAGTGAACTGGAAATGGAAAGAAAT
TGTTGATGTTGTTGAGATTCTGCTGCCACCACATTCTACTTGTCTGTTGTGTATCCTATCTTGGTTACACTTACGGAATTCTACTTGTCATAGTAGTCTGAAGGCGCCGGCTGCTTTTGAGTGTTTTACCAGCGGGGATTTTAACCATTTTTTATTAATTACTCGTACATTTTTTTGTGAATTTGAATTTGTTTAATGAA
AAGTTACATTTGATTAGAACATCGTGATGTTCATGAAGCTTTGATCGAGAGGAAATATCCGAGAGTGCAGGCAAAATGGGCTTGGCTTCTTGGAATGCATAGGAG
Intron 6 GTGCGTGGAC ... CAATGGACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 18.1 | 26 | 6 | 5.5 |
| A2 | 23.47 | 24 | 9 | 5.8 |
| A3 | 14.78 | 10 | 3 | 0.5 |
| A4 | 37.38 | 18 | 11 | 10.5 |
| A5 | 1 | 12 | 0 | 0.3 |
| A6 | 10.99 | 5 | 1 | 0.3 |
| A7 | 7.52 | 9 | 1 | 0.5 |
| A8 | 10.99 | 15 | 3 | 0.8 |
| A9 | 16.36 | 12 | 4 | 0.8 |
| A10 | 16.97 | 12 | 2 | 3 |
>TRINITY_DN126242_c2_g1_i5 from sample A1 / Example spliced isoformTTCCTGATAGTCTGTACAAGGTTCGTTTCTGATCATAAGTACATCCTCCAACACTATAAATTAAGTGGTAAGCTTTAACCTGAATCACCAATCTGAAATGCACTGAAAATACTAATATTTTGCAGAAAGTCTGCTTCGCAGAAACTCTGGATGAAAGCTAGATGCTGGATTGAAACCATGTAGCATTTATGTTAATAAAT
GAACCACATCAATAAGTTTCTAGTTGGATTATTTGGGTTACGGCATTTGGTAAGAGACATTTGGCATGCCTTTTGGTAAGATGAAGGGCATAAAGAATCAGGACAGTCTAGAACTAACTACAACATGCCATAGCCTTGTAGAAACTGATGTAAAGTCCTGGAATTGTGTTTCTTTTGCTTATATTGTATATAGTTAGTAT
TTGTTTACGAATACATATTACTTAGATGAGGATGACATATATTCTATACTAAGGTTTTTGTTGAGGGCTTTGCAGGTTTTTGCATTTGGATCTGTGCCACTGAAAACATATCTTTCTGATGGAGACATTGATTTGACTGCTTTTGGCAATCATCAACAGCTTACAAATGCATGGGCAAATGAAGTGCGTTCTGCCCTTGA
AGAAGAAGGGCGAAGCAAGGATGCTAAATTTAGAGTAAAAGATGTTCAGTACATACATGCTGCTGAGGTGAAGCTAGTGAAATGTATTGTTGAAAACATTGTTGTAGACATCTCCTTCAATCAGCTTGGAGGACTTTGCACCCTTTGCTTTCTTGAGCACGTTAATCTATTGATTGGGAAGAGACACTTATTCAAACGTA
GTATTATACTTGTTAAAGCATGGTGCTATTATGAAAGCCGTCTTCTTGGTGCTCATCATGGACTTATTTCAACGTATGCTTTGGAGACATTGGTCCTGTACATTTTTCATCTTTTCCATGCATCACTACGGGGTCCTCTGGAGGTTTTATTTAGGTTTCTGGATTATTTTAGTAAGTTCGATTGGGACAATTATTGTGTC
AGCATACAGGGTCCTGTTCCCATCGCCTCTCTTCCACAAATAGCGGCTGAACAACCTCAGACAGATGGAGGCAAACTGTTGCTTAGCAAGGAATTTCTGAAGACATGCATTGATAGGTACTCTGATGTTCCAAACAGCCATGATAGTAATAGTCGACTATTCAGCTCCAAATTCTTGAATATAGTTGATCCATTACGTGA
AAATAATAATCTTGGGCGGAGTGTGAGCAAAGCAAATTTCTATCGTATACGAAGTGCATTTGGATATGGAGCTCGCAAATTGGCAAAGATTCTACAATCTCCTGAAGGAAAGATTGCTGCAGAACTGGATTGTTTTTTCCCCATTACTTGGGAGAGGCATGCAAGTGGACAACGTCAAGATGTTCCAGACTCAATATCAT
GGGCATTGGAATGCAGGTTTTCTGTGGAAAATGCAAGCTTCATTTCATTTTCAGAGTCAAGTGTTGAGAATGATAAGCAAGATACAAAGGATAATGCTTCAACTGAGGGAAATGGATCTCAATATGGAGAAACGGTTGGCCAAACTAGTAATTTAAAATCTGAAACTATCAAGATTGATAAGAGTTTAATTTCATCCTCT
GCTGGAGACATGTCCATAATGGCACAAAGTAATGGCACCGACTTGAACATTGTTGAAACCAAGAGCGATGATGCATCATTTAAAGAGCAGGAAGCAGCATTAGCAGCCCATGAATTCCCATATAAATTTTCCCCAAGCTTAGTGGTTCAACCTAACCTTAGTCCCCACTATCCAACACAAAATACTGAAACGATGTTTCT
TTCACCAAAATCAAATACTGAAACCTCCCAAGTAAATGACATTTCAGCTCTCAGTTCAAATCTGTCCCACCTTCCCATGGTAACTGAAAGCACAGATTCTAACCCCTATGCATATCAGCCTACTATTATACCATTTTCTTCGACCAATATATATAATTCTACGTATCCAATTCAACCTGCTGTGGAAGTAGGAGGAGCTT
CATATAAATCCCAAGGTAGAAATTTTGAAAATGCCAATGAAGTTATCAGGAAGAAAAGTTTAAGGGATCAGCAAGCTAGCAAAAGCACAGAGACTGGACCTATGCAGAAGATAGAAATTGTAGTTCCTGATCCAAGGTTGGAGAGCAGGTCAACTGAGGCTGTAGTCGATGCCTTGAGTAGTCCAAGTTCTGATCTCCTC
ACTGGTGATTTTGAAAATCACTTGAACAATCTTGCTCATGGAAGATCATGCCAAAATCCTGTTTGGCATGGTTATATTGCACAATCTCCAGTTCTGCCTCCGTATGCCCATGAACACCTGCTATGGGAAGGTCCCGGAAGACCTGTTCATCCTAACATGAGTATGCCCTCTCACATGCATGGCCGGGGTGTTGTTCCCAG
ATATCCATATTTTCCGGTTGGTTATCGAGGAGCAAATCCTCCAGTCCTGCCAGGGACCTTCAATGTTGAGGAAATGCCAAGGCCAAGAAGTGGAACGGGAACATACTTACCGAATCTGAACTATCATTCCTCTAGAGAGAAAAACTTTTCTAAAGGTAAGCATCAACATGGCATACTTGCACATGATTCTACTGCTCGAG
AGGGTGGTGCCCACCATAGTAGTAGCAGAAGTCAAGTGGGATACAATTCAGGATCATCCTGGCAGATTGGAATAGAAAGACTGCACAAGAGTTCATATCTGCCAATTTCTCATGCAGTGATGAGGAACACAGCTGTGGCCTCACAACCAGGATCAGGGGCTCCAGGGCCGCACTCGCTGTCTCGTGTTAGTGTCCAGGAG
GCACCTTCGTTTACAGCAGTTAGCCCATCTGGTCCTCCATTTGTCACACGTTACCCCTTTTCAAATGGTACTACTTTTCCATCTGATCCACCAGAGTTAGAAACACTTGGACCAGTACAATTCAGTAATGATCGCGTGAGATCAGAGTCAGGGGAGCACGTTAGCTCTGTGCTGAATGAGCAATCTTACATGTCTGGTGC
AGCAGCTCCCTTACCTTCTGCCAGTGAGAGGGGACTGCAGCAACCAGCTGCCGCTTTGAAGCAGGACAGGGCAGCACCACAGAGTTACCAGATGAAGGAAGAAGATTTCCCTCCACTTTCTGTCCAAGGGCAACATAAGGGCAGT
>TRINITY_DN126242_c2_g1_i12 from sample A1 / Example unspliced isoform:ATTCAAGGAGAGGTTTGCACCTCGGGAGATTTGATCCCTCTCGGCGCTTGATAGAACCTAGGATTTGGATCTAGGCTGGTAATATTACAGTTGGTCACATGATAGTCACATATCACCAACATTGATAGTCATTTCATTATTAACATTCTTGTGGTCACAAGCTAATATTGACAGTAAATGGTGGAGCATACTGTTTGTTT
CTACAGCACCCTCCTTTAAATGAGAGCTCCAATAAACTACTAAAAATCTTTAGCATTTGATCTGCTTTTCTCTATCTTCAAGATCACTGTTTGCCAAAGATCAATTTCTGGCATCATCCCAGATGAGAACTGCAACTGTAGAAGTGTGACCTGATGATCCAAAATCAAGTGCCATAACCAGTAACCACTCATATCAGAAG
CTCCCTCTTAAACTCCTTCTAGACGCTATGGGAGAAACCAATACAGTCCAGTGATCAATTCCACAAATTGGAAAAGTGGTTTGCAAGAACACTAATCTCCCACGTACAATCCTATATAACAGTACCTAACAAGACTCCAAAAACCAAATTTCATTTGGTTTGTACTCACTGACAACTGTACCTAACTTGAAAAGATCTCG
TCTTAGGTGGCAACTGGTAACATATAACAAAAAAGAATGAGAAATCCATTTCTTTCAAGATCTGAAAGGGTGCAATGCACAATTTAAATGAAATTAAATTCACAATTTTAGACTAATGATTTATAGAATGAGTCACATCATAATTGAGAAGAGACGATCAATATTTAGTAAAATTTGGATGCAAACAACATAACTGGTCT
TATCAATATTAAATATTTTATGATGGAGTAGTAATATAATCTGCACAAGTTTAGATCTATTTCCTTAATCTGTAGTAATATCATAATCATATATGTGATGCCTCCACTAGGAATCTGCTTAAGCAATGGGAAGACACAAATGCAGGTTTATCTCCTTGTGCACATTGATTAACATATAAGGCTGGTGTTGATTTCTGGAC
TCACGATGTTCACGACATTGATGTCAATGTTTCATCAAATCCAAAAGAAAGAAAATAAACTATAATGAACAAAAGAGGGAAAGGATCATAATAAGTTTTAAACATCCTTTTGACAAGGCATCTTACTCGCTACAAATGCCCTGTTGTAACATGATTAGATGCTACTGTGTGCCTACAAAATGATATTTTTGACAGCGCTT
TTGTTGAAACTCAAGTCTGATCACTTTGAGCAATGAAACCATAAATCTCTCATGTTTTATTGAACTAATATTGTGAGATGTTTGCATGAGTCCAATGATAAGACCTATTGGTGAGGATTTATGGATGTATTATCACTGAAATTGATAGGTATTTACTTTGATGAAAAAGTCCTCTATTAGGTTCAAGAACTAGCTCATAG
GAAAAAAATAATGATAAGGTCAACATTAAATGTGAACTTTTAACAAAAATGTATGTAAGAAACATCTTGAAAATGTCTTCGATTAGGATTATCGTCTTCAAGATCTCATTGGCTGGAGTTCCAAGATATTGTCAAGGTGGCATTATCTACAACATTCTGGGTATGGGTATAATACCCTGAGCGGGACCATTATGGTGTGG
TACTGGTATCAACTTTAATTGAATACAAAGTGCTTTATGAACGATATAACTGGCAGCTAGAGCAAATAATAAAAAATAAGTGAAAATCATAAAGTTCAAGTAACACTGCAAGGAAAAATTGTTGTTGAAAGATACAATTTTTTTTGCAAAGAAGATGGATCGGTTAGTTTTTGATGAAGTATGGCACTGATCTCAATATC
GATTAATGTTGCCAATATCATTTTGGGGGAATATATTGCTGAGGGTCTGGAAATAAGCTTATCGGAAATATCGGGGAAAATATCTGAAATTATTGGAAAATATTGGCCAGCATAAACCTGGACCTGAAAAACTCAGAAAATATCAGAAACATCGGAAACTTCAAAAACTCGGAAAAATTCCGAACTACAAAACAAGTCTC
ATTAGAAACATAAGAGGGGAATGCTGCAAAAGAACAGAAAGAACTGCAAATTTACAACCAGTAATCTGCCAGATGAAATGGCCACATTTAAGAAAGTTGATACAATGATGCAACTAAATAAGCTTACAAATATTAATAGATATCAGAAAAAAGCAGATTGGAAAATGCAAAAACTCGGAATAGTGCTCTTCGGTTAGAAA
TATTGTTTTTTTTATCTAGAGCACTGGAAAAATAGTCACTAAGAGTGATCTCTTTCTTTCTTTAGATTGCTGCAAAGTTTATTTACTTTCTTCAACGAAAGAAAATAAATAGAAAATGTAGTATTTTGATTTTCCAAGTATGACAAGAAACTCTTTGATGAGACTGGTTATCATATACATGTCTAATGCAAACAAGTGGG
AGACATGTTAATTACAAGTTAAAACCAAGGGGGGACATGTTAATTACAAGTTAAAACCAGGGGGGTGCATTTAGCTTTGGTGATGAAGGAATTGAATTTGTACTGGTAAGGAGTTCCACACCTGGACAGTGCCAATACTTGCCTGTCACATTTGTTATATATATAAAAACTAAAAGCCATTGCGTAATCCAGAGCACTGG
CAAAGTTTAAATTAGTAGTGTTGTAAATGCCATCTTTATATTTATGCCAACATTATACAAGAAATGATCATCACGGATCAATTGACACAGCCAAGGAGTTTCACAAACACAAACACACTTTCAGATTTATGGGGTGCTTTTCAGGATTGGCAGAGTTTTTCCAAAATCAGTTCTCTGGGGCTTGTTTGAAGATTGTGTGC
TCAAATAGAAGAGTTTTAGCAGAGTATGGGGGCAATGCATGTCTGTTTCCGTGGTAGATTGTGTTTATGATTCTGGCTGAGATCATCTTTTGCATTGAGATTTAAGCATTTTTTTGGTATGCTCGCTTTCAACTAACTTGTATTTTAAATCTGGTTGTTAAATACTAATTCTGCCTATTTTACAACTCATTGGAACAGTT
TAATGCAGCTACAGTGACTTGGATGATTTTAATCACTTCAATTCTTAGGAGAATCCATTATCTAGTTTTGACAGTCCTTTTCAGAAACTACACTTTGAGGAAGCCAATATACAAAAAAACTGGTTCTATTTGAGAATGATTGCATGAGCACAGAGATTAGCGGAAACTGAACTAACTTGTAGAGAGAAAACATAAAAGTT
AGTTTGCATGGGCAATCTGGACAGTTCGAAGGGAAATTTAACAGAAGTAGAATGTCCACCTTCGGCTAACCCTTTGCCCACTGCCATTGATGTTGGCATCGAGGGCTGGGATAAAGCTGAGCTTAGGACTGGAGAACTTATTTCTCAAATTCAACCAACTGTTATTTCAGAGAATCGAAGGAAGGCTGTTGTTCAATATG
TTCAACATCTTGTTCGCCGATGTATTGGATGTGAGGTTTTTGCATTTGGATCTGTGCCACTGAAAACATATCTTTCTGATGGAGACATTGATTTGACTGCTTTTGGCAATCATCAACAGCTTACAAATGCATGGGCAAATGAAGTGCGTTCTGCCCTTGAAGAAGAAGGGCGAAGCAAGGATGCTAAATTTAGAGTAAAA
GATGTTCAGTACATACATGCTGCTGAGGTGAAGCTAGTGAAATGTATTGTTGAAAACATTGTTGTAGACATCTCCTTCAATCAGCTTGGAGGACTTTGCACCCTTTGCTTTCTTGAGCACGTAAGTGCCTTATATTTTCCAGTAGATCACATCCTACTTGTGGGTCATGTTGTCATTAGTGCATGTAATGATGCCAGTCT
ATTCAAAAGTTGCAATGTCCATTTGATGTTAATGTGACAAATTTACTTGTGAATTGATATACAAACCCCGTCTGTAGGTTAATCTATTGATTGGGAAGAGACACTTATTCAAACGTAGTATTATACTTGTTAAAGCATGGTGCTATTATGAAAGCCGTCTTCTTGGTGCTCATCATGGACTTATTTCAACGTATGCTTTG
GAGACATTGGTCCTGTACATTTTTCATCTTTTCCATGCATCACTACGGGGTCCTCTGGAGgtgcgtggacatatcagtgacatatatttcctttgctagatgctagaaataacaggacatcaaatattcaggttctgagaatatttaagaagggctacttgattaaatttttatatgtaatgactatcaagtactgatgc
agtagtcaatggacagGTTTTATTTAGGTTTCTGGATTATTTTAGTAAGTTCGATTGGGACAATTATTGTGTCAGCATACAGGGTCCTGTTCCCATCGCCTCTCTTCCACAAATAGCGGCTGAACAACCTCAGACAGATGGAGGCAAACTGTTGCTTAGCAAGGAATTTCTGAAGACATGCATTGATAGGTACTCTGATG
TTCCAAACAGCCATGATAGTAATAGTCGACTATTCAGCTCCAAATTCTTGAATATAGTTGATCCATTACGTGAAAATAATAATCTTGGGCGGAGTGTGAGCAAAGCAAATTTCTATCGTATACGAAGTGCATTTGGATATGGAGCTCGCAAATTGGCAAAGATTCTACAATCTCCTGAAGGAAAGATTGCTGCAGAACTG
GATTGTTTTTTCCCCATTACTTGGGAGAGGCATGCAAGTGGACAACGTCAAGATGTTCCAGACTCAATATCATGGGCATTGGAATGCAGGTTTTCTGTGGAAAATGCAAGCTTCATTTCATTTTCAGAGTCAAGTGTTGAGAATGATAAGCAAGATACAAAGGATAATGCTTCAACTGAGGGAAATGGATCTCAATATGG
AGAAACGGTTGGCCAAACTAGTAATTTAAAATCTGAAACTATCAAGATTGATAAGAGTTTAATTTCATCCTCTGCTGGAGACATGTCCATAATGGCACAAAGTAATGGCACCGACTTGAACATTGTTGAAACCAAGAGCGATGATGCATCATTTAAAGAGCAGGAAGCAGCATTAGCAGCCCATGAATTCCCATATAAAT
TTTCCCCAAGCTTAGTGGTTCAACCTAACCTTAGTCCCCACTATCCAACACAAAATACTGAAACGATGTTTCTTTCACCAAAATCAAATACTGAAACCTCCCAAGTAAATGACATTTCAGCTCTCAGTTCAAATCTGTCCCACCTTCCCATGGTAACTGAAAGCACAGATTCTAACCCCTATGCATATCAGCCTACTATT
ATACCATTTTCTTCGACCAATATATATAATTCTACGTATCCAATTCAACCTGCTGTGGAAGTAGGAGGAGCTTCATATAAATCCCAAGGTAGAAATTTTGAAAATGCCAATGAAGTTATCAGGAAGAAAAGTTTAAGGGATCAGCAAGCTAGCAAAAGCACAGAGACTGGACCTATGCAGAAGATAGAAATTGTAGTTCC
TGATCCAAGGTTGGAGAGCAGGTCAACTGAGGCTGTAGTCGATGCCTTGAGTAGTCCAAGTTCTGATCTCCTCACTGGTGATTTTGAAAATCACTTGAACAATCTTGCTCATGGAAGATCATGCCAAAATCCTGTTTGGCATGGTTATATTGCACAATCTCCAGTTCTGCCTCCGTATGCCCATGAACACCTGCTATGGG
AAGGTCCCGGAAGACCTGTTCATCCTAACATGAGTATGCCCTCTCACATGCATGGCCGGGGTGTTGTTCCCAGATATCCATATTTTCCGGTTGGTTATCGAGGAGCAAATCCTCCAGTCCTGCCAGGGACCTTCAATGTTGAGGAAATGCCAAGGCCAAGAAGTGGAACGGGAACATACTTACCGAATCTGAACTATCAT
TCCTCTAGAGAGAAAAACTTTTCTAAAGGTAAGCATCAACATGGCATACTTGCACATGATTCTACTGCTCGAGAGGGTGGTGCCCACCATAGTAGTAGCAGAAGTCAAGTGGGATACAATTCAGGATCATCCTGGCAGATTGGAATAGAAAGACTGCACAAGAGTTCATATCTGCCAATTTCTCATGCAGTGATGAGGAA
CACAGCTGTGGCCTCACAACCAGGATCAGGGGCTCCAGGGCCGCACTCGCTGTCTCGTGTTAGTGTCCAGGAGGCACCTTCGTTTACAGCAGTTAGCCCATCTGGTCCTCCATTTGTCACACGTTACCCCTTTTCAAATGGTACTACTTTTCCATCTGATCCACCAGAGTTAGAAACACTTGGACCAGTACAATTCAGTA
ATGATCGCGTGAGATCAGAGTCAGGGGAGCACGTTAGCTCTGTGCTGAATGAGCAATCTTACATGTCTGGTGCAGCAGCTCCCTTACCTTCTGCCAGTGAGAGGGGACTGCAGCAACCAGCTGCCGCTTTGAAGCAGGACAGGGCAGCACCACAGAGTTACCAGATGAAGGAAGAAGATTTCCCTCCACTTTCTGTCCAA
GGGCAACATAAGGGCAGTTCAGCCACTGCTGGAAATGGTCATAGTTGCAATGATAGAAGTTAACATAGTTAAGCCCTTGTTGTAACTTGTATAACTCTTTCATCATAGTTTAACTCAAGTGAGATAAGAGCCAGGGGGCCACGTTAGCTCTGTGCTGAATGAGCAATCTTACATGTCTGGTGCAGCAGCTCCCTTACCTT
CTTCCAGTGAGAGGGAACTGCAGCAACCAGCTGCCGCTCTCAAGCAAGACAGGGCAGCACCACGGAATTACCAAATGAAGGAAGAAGATTTCAGCCACCTTCTTTCCAAGGGCAACATAAGGGCAGTTCAGCCACTGCTGGAAATGGTCATAATTGCAATGGTAGAAGTTCACAGAGTTAAGCTTTTGTTGTAACTTTTT
CATCATAGTTTTTTAATTCATGTTCAACTGCCTGATTGAGCTGCTTTCAATGCTCTGTCTAAATTCAGGCAGGAGCAGCAGCCAAAAGGTTTCTGTATATCCGATTGGTTAAATTTGGATTTAATTTATGTCTAGTTTATAGACTGTAAAGTTGTTGCCCAATTTCATTCGATAACATGCCCAGCCCATTTTTTAAGGGC
TTTAAGTCAGAATAACACCTGCCAGTGAACTGGAAATGGAAAGAAATTGTTGATGTTGTTGAGATTCTGCTGCCACCACATTCTACTTGTCTGTTGTGTATCCTATCTTGGTTACACTTACGGAATTCTACTTGTCATAGTAGTCTGAAGGCGCCGGCTGCTTTTGAGTGTTTTACCAGCGGGGATTTTAACCATTTTTT
ATTAATTACTCGTACATTTTTTTGTGAATTTGAATTTGTTTAATGAAAAGTTACATTTGATTAGAACATCGTGATGTTCATGAAGCTTTGATCGAGAGGAAATATCCGAGAGTGCAGGCAAAATGGGCTTGGCTTCTTGGAATGCATAG
Intron 7 GTAAGTGCCT ... CCGTCTGTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 30.66 | 15.8 | 5 | 9 |
| A2 | 34.18 | 19.3 | 14 | 6 |
| A3 | 25.59 | 17.5 | 11 | 1 |
| A4 | 33.93 | 17.8 | 11 | 7 |
| A5 | 28.36 | 12.7 | 4 | 6 |
| A6 | 29.36 | 4.8 | 1 | 3 |
| A7 | 30.01 | 12.8 | 6 | 5 |
| A8 | 21.46 | 14.7 | 2 | 6 |
| A9 | 12.5 | 7 | 1 | 1 |
| A10 | 35.75 | 10.2 | 5 | 6 |
>TRINITY_DN126242_c2_g1_i5 from sample A1 / Example spliced isoformTTCCTGATAGTCTGTACAAGGTTCGTTTCTGATCATAAGTACATCCTCCAACACTATAAATTAAGTGGTAAGCTTTAACCTGAATCACCAATCTGAAATGCACTGAAAATACTAATATTTTGCAGAAAGTCTGCTTCGCAGAAACTCTGGATGAAAGCTAGATGCTGGATTGAAACCATGTAGCATTTATGTTAATAAAT
GAACCACATCAATAAGTTTCTAGTTGGATTATTTGGGTTACGGCATTTGGTAAGAGACATTTGGCATGCCTTTTGGTAAGATGAAGGGCATAAAGAATCAGGACAGTCTAGAACTAACTACAACATGCCATAGCCTTGTAGAAACTGATGTAAAGTCCTGGAATTGTGTTTCTTTTGCTTATATTGTATATAGTTAGTAT
TTGTTTACGAATACATATTACTTAGATGAGGATGACATATATTCTATACTAAGGTTTTTGTTGAGGGCTTTGCAGGTTTTTGCATTTGGATCTGTGCCACTGAAAACATATCTTTCTGATGGAGACATTGATTTGACTGCTTTTGGCAATCATCAACAGCTTACAAATGCATGGGCAAATGAAGTGCGTTCTGCCCTTGA
AGAAGAAGGGCGAAGCAAGGATGCTAAATTTAGAGTAAAAGATGTTCAGTACATACATGCTGCTGAGGTGAAGCTAGTGAAATGTATTGTTGAAAACATTGTTGTAGACATCTCCTTCAATCAGCTTGGAGGACTTTGCACCCTTTGCTTTCTTGAGCACGTTAATCTATTGATTGGGAAGAGACACTTATTCAAACGTA
GTATTATACTTGTTAAAGCATGGTGCTATTATGAAAGCCGTCTTCTTGGTGCTCATCATGGACTTATTTCAACGTATGCTTTGGAGACATTGGTCCTGTACATTTTTCATCTTTTCCATGCATCACTACGGGGTCCTCTGGAGGTTTTATTTAGGTTTCTGGATTATTTTAGTAAGTTCGATTGGGACAATTATTGTGTC
AGCATACAGGGTCCTGTTCCCATCGCCTCTCTTCCACAAATAGCGGCTGAACAACCTCAGACAGATGGAGGCAAACTGTTGCTTAGCAAGGAATTTCTGAAGACATGCATTGATAGGTACTCTGATGTTCCAAACAGCCATGATAGTAATAGTCGACTATTCAGCTCCAAATTCTTGAATATAGTTGATCCATTACGTGA
AAATAATAATCTTGGGCGGAGTGTGAGCAAAGCAAATTTCTATCGTATACGAAGTGCATTTGGATATGGAGCTCGCAAATTGGCAAAGATTCTACAATCTCCTGAAGGAAAGATTGCTGCAGAACTGGATTGTTTTTTCCCCATTACTTGGGAGAGGCATGCAAGTGGACAACGTCAAGATGTTCCAGACTCAATATCAT
GGGCATTGGAATGCAGGTTTTCTGTGGAAAATGCAAGCTTCATTTCATTTTCAGAGTCAAGTGTTGAGAATGATAAGCAAGATACAAAGGATAATGCTTCAACTGAGGGAAATGGATCTCAATATGGAGAAACGGTTGGCCAAACTAGTAATTTAAAATCTGAAACTATCAAGATTGATAAGAGTTTAATTTCATCCTCT
GCTGGAGACATGTCCATAATGGCACAAAGTAATGGCACCGACTTGAACATTGTTGAAACCAAGAGCGATGATGCATCATTTAAAGAGCAGGAAGCAGCATTAGCAGCCCATGAATTCCCATATAAATTTTCCCCAAGCTTAGTGGTTCAACCTAACCTTAGTCCCCACTATCCAACACAAAATACTGAAACGATGTTTCT
TTCACCAAAATCAAATACTGAAACCTCCCAAGTAAATGACATTTCAGCTCTCAGTTCAAATCTGTCCCACCTTCCCATGGTAACTGAAAGCACAGATTCTAACCCCTATGCATATCAGCCTACTATTATACCATTTTCTTCGACCAATATATATAATTCTACGTATCCAATTCAACCTGCTGTGGAAGTAGGAGGAGCTT
CATATAAATCCCAAGGTAGAAATTTTGAAAATGCCAATGAAGTTATCAGGAAGAAAAGTTTAAGGGATCAGCAAGCTAGCAAAAGCACAGAGACTGGACCTATGCAGAAGATAGAAATTGTAGTTCCTGATCCAAGGTTGGAGAGCAGGTCAACTGAGGCTGTAGTCGATGCCTTGAGTAGTCCAAGTTCTGATCTCCTC
ACTGGTGATTTTGAAAATCACTTGAACAATCTTGCTCATGGAAGATCATGCCAAAATCCTGTTTGGCATGGTTATATTGCACAATCTCCAGTTCTGCCTCCGTATGCCCATGAACACCTGCTATGGGAAGGTCCCGGAAGACCTGTTCATCCTAACATGAGTATGCCCTCTCACATGCATGGCCGGGGTGTTGTTCCCAG
ATATCCATATTTTCCGGTTGGTTATCGAGGAGCAAATCCTCCAGTCCTGCCAGGGACCTTCAATGTTGAGGAAATGCCAAGGCCAAGAAGTGGAACGGGAACATACTTACCGAATCTGAACTATCATTCCTCTAGAGAGAAAAACTTTTCTAAAGGTAAGCATCAACATGGCATACTTGCACATGATTCTACTGCTCGAG
AGGGTGGTGCCCACCATAGTAGTAGCAGAAGTCAAGTGGGATACAATTCAGGATCATCCTGGCAGATTGGAATAGAAAGACTGCACAAGAGTTCATATCTGCCAATTTCTCATGCAGTGATGAGGAACACAGCTGTGGCCTCACAACCAGGATCAGGGGCTCCAGGGCCGCACTCGCTGTCTCGTGTTAGTGTCCAGGAG
GCACCTTCGTTTACAGCAGTTAGCCCATCTGGTCCTCCATTTGTCACACGTTACCCCTTTTCAAATGGTACTACTTTTCCATCTGATCCACCAGAGTTAGAAACACTTGGACCAGTACAATTCAGTAATGATCGCGTGAGATCAGAGTCAGGGGAGCACGTTAGCTCTGTGCTGAATGAGCAATCTTACATGTCTGGTGC
AGCAGCTCCCTTACCTTCTGCCAGTGAGAGGGGACTGCAGCAACCAGCTGCCGCTTTGAAGCAGGACAGGGCAGCACCACAGAGTTACCAGATGAAGGAAGAAGATTTCCCTCCACTTTCTGTCCAAGGGCAACATAAGGGCAGT
>TRINITY_DN126242_c2_g1_i12 from sample A1 / Example unspliced isoform:ATTCAAGGAGAGGTTTGCACCTCGGGAGATTTGATCCCTCTCGGCGCTTGATAGAACCTAGGATTTGGATCTAGGCTGGTAATATTACAGTTGGTCACATGATAGTCACATATCACCAACATTGATAGTCATTTCATTATTAACATTCTTGTGGTCACAAGCTAATATTGACAGTAAATGGTGGAGCATACTGTTTGTTT
CTACAGCACCCTCCTTTAAATGAGAGCTCCAATAAACTACTAAAAATCTTTAGCATTTGATCTGCTTTTCTCTATCTTCAAGATCACTGTTTGCCAAAGATCAATTTCTGGCATCATCCCAGATGAGAACTGCAACTGTAGAAGTGTGACCTGATGATCCAAAATCAAGTGCCATAACCAGTAACCACTCATATCAGAAG
CTCCCTCTTAAACTCCTTCTAGACGCTATGGGAGAAACCAATACAGTCCAGTGATCAATTCCACAAATTGGAAAAGTGGTTTGCAAGAACACTAATCTCCCACGTACAATCCTATATAACAGTACCTAACAAGACTCCAAAAACCAAATTTCATTTGGTTTGTACTCACTGACAACTGTACCTAACTTGAAAAGATCTCG
TCTTAGGTGGCAACTGGTAACATATAACAAAAAAGAATGAGAAATCCATTTCTTTCAAGATCTGAAAGGGTGCAATGCACAATTTAAATGAAATTAAATTCACAATTTTAGACTAATGATTTATAGAATGAGTCACATCATAATTGAGAAGAGACGATCAATATTTAGTAAAATTTGGATGCAAACAACATAACTGGTCT
TATCAATATTAAATATTTTATGATGGAGTAGTAATATAATCTGCACAAGTTTAGATCTATTTCCTTAATCTGTAGTAATATCATAATCATATATGTGATGCCTCCACTAGGAATCTGCTTAAGCAATGGGAAGACACAAATGCAGGTTTATCTCCTTGTGCACATTGATTAACATATAAGGCTGGTGTTGATTTCTGGAC
TCACGATGTTCACGACATTGATGTCAATGTTTCATCAAATCCAAAAGAAAGAAAATAAACTATAATGAACAAAAGAGGGAAAGGATCATAATAAGTTTTAAACATCCTTTTGACAAGGCATCTTACTCGCTACAAATGCCCTGTTGTAACATGATTAGATGCTACTGTGTGCCTACAAAATGATATTTTTGACAGCGCTT
TTGTTGAAACTCAAGTCTGATCACTTTGAGCAATGAAACCATAAATCTCTCATGTTTTATTGAACTAATATTGTGAGATGTTTGCATGAGTCCAATGATAAGACCTATTGGTGAGGATTTATGGATGTATTATCACTGAAATTGATAGGTATTTACTTTGATGAAAAAGTCCTCTATTAGGTTCAAGAACTAGCTCATAG
GAAAAAAATAATGATAAGGTCAACATTAAATGTGAACTTTTAACAAAAATGTATGTAAGAAACATCTTGAAAATGTCTTCGATTAGGATTATCGTCTTCAAGATCTCATTGGCTGGAGTTCCAAGATATTGTCAAGGTGGCATTATCTACAACATTCTGGGTATGGGTATAATACCCTGAGCGGGACCATTATGGTGTGG
TACTGGTATCAACTTTAATTGAATACAAAGTGCTTTATGAACGATATAACTGGCAGCTAGAGCAAATAATAAAAAATAAGTGAAAATCATAAAGTTCAAGTAACACTGCAAGGAAAAATTGTTGTTGAAAGATACAATTTTTTTTGCAAAGAAGATGGATCGGTTAGTTTTTGATGAAGTATGGCACTGATCTCAATATC
GATTAATGTTGCCAATATCATTTTGGGGGAATATATTGCTGAGGGTCTGGAAATAAGCTTATCGGAAATATCGGGGAAAATATCTGAAATTATTGGAAAATATTGGCCAGCATAAACCTGGACCTGAAAAACTCAGAAAATATCAGAAACATCGGAAACTTCAAAAACTCGGAAAAATTCCGAACTACAAAACAAGTCTC
ATTAGAAACATAAGAGGGGAATGCTGCAAAAGAACAGAAAGAACTGCAAATTTACAACCAGTAATCTGCCAGATGAAATGGCCACATTTAAGAAAGTTGATACAATGATGCAACTAAATAAGCTTACAAATATTAATAGATATCAGAAAAAAGCAGATTGGAAAATGCAAAAACTCGGAATAGTGCTCTTCGGTTAGAAA
TATTGTTTTTTTTATCTAGAGCACTGGAAAAATAGTCACTAAGAGTGATCTCTTTCTTTCTTTAGATTGCTGCAAAGTTTATTTACTTTCTTCAACGAAAGAAAATAAATAGAAAATGTAGTATTTTGATTTTCCAAGTATGACAAGAAACTCTTTGATGAGACTGGTTATCATATACATGTCTAATGCAAACAAGTGGG
AGACATGTTAATTACAAGTTAAAACCAAGGGGGGACATGTTAATTACAAGTTAAAACCAGGGGGGTGCATTTAGCTTTGGTGATGAAGGAATTGAATTTGTACTGGTAAGGAGTTCCACACCTGGACAGTGCCAATACTTGCCTGTCACATTTGTTATATATATAAAAACTAAAAGCCATTGCGTAATCCAGAGCACTGG
CAAAGTTTAAATTAGTAGTGTTGTAAATGCCATCTTTATATTTATGCCAACATTATACAAGAAATGATCATCACGGATCAATTGACACAGCCAAGGAGTTTCACAAACACAAACACACTTTCAGATTTATGGGGTGCTTTTCAGGATTGGCAGAGTTTTTCCAAAATCAGTTCTCTGGGGCTTGTTTGAAGATTGTGTGC
TCAAATAGAAGAGTTTTAGCAGAGTATGGGGGCAATGCATGTCTGTTTCCGTGGTAGATTGTGTTTATGATTCTGGCTGAGATCATCTTTTGCATTGAGATTTAAGCATTTTTTTGGTATGCTCGCTTTCAACTAACTTGTATTTTAAATCTGGTTGTTAAATACTAATTCTGCCTATTTTACAACTCATTGGAACAGTT
TAATGCAGCTACAGTGACTTGGATGATTTTAATCACTTCAATTCTTAGGAGAATCCATTATCTAGTTTTGACAGTCCTTTTCAGAAACTACACTTTGAGGAAGCCAATATACAAAAAAACTGGTTCTATTTGAGAATGATTGCATGAGCACAGAGATTAGCGGAAACTGAACTAACTTGTAGAGAGAAAACATAAAAGTT
AGTTTGCATGGGCAATCTGGACAGTTCGAAGGGAAATTTAACAGAAGTAGAATGTCCACCTTCGGCTAACCCTTTGCCCACTGCCATTGATGTTGGCATCGAGGGCTGGGATAAAGCTGAGCTTAGGACTGGAGAACTTATTTCTCAAATTCAACCAACTGTTATTTCAGAGAATCGAAGGAAGGCTGTTGTTCAATATG
TTCAACATCTTGTTCGCCGATGTATTGGATGTGAGGTTTTTGCATTTGGATCTGTGCCACTGAAAACATATCTTTCTGATGGAGACATTGATTTGACTGCTTTTGGCAATCATCAACAGCTTACAAATGCATGGGCAAATGAAGTGCGTTCTGCCCTTGAAGAAGAAGGGCGAAGCAAGGATGCTAAATTTAGAGTAAAA
GATGTTCAGTACATACATGCTGCTGAGGTGAAGCTAGTGAAATGTATTGTTGAAAACATTGTTGTAGACATCTCCTTCAATCAGCTTGGAGGACTTTGCACCCTTTGCTTTCTTGAGCACgtaagtgccttatattttccagtagatcacatcctacttgtgggtcatgttgtcattagtgcatgtaatgatgccagtct
attcaaaagttgcaatgtccatttgatgttaatgtgacaaatttacttgtgaattgatatacaaaccccgtctgtagGTTAATCTATTGATTGGGAAGAGACACTTATTCAAACGTAGTATTATACTTGTTAAAGCATGGTGCTATTATGAAAGCCGTCTTCTTGGTGCTCATCATGGACTTATTTCAACGTATGCTTTG
GAGACATTGGTCCTGTACATTTTTCATCTTTTCCATGCATCACTACGGGGTCCTCTGGAGGTGCGTGGACATATCAGTGACATATATTTCCTTTGCTAGATGCTAGAAATAACAGGACATCAAATATTCAGGTTCTGAGAATATTTAAGAAGGGCTACTTGATTAAATTTTTATATGTAATGACTATCAAGTACTGATGC
AGTAGTCAATGGACAGGTTTTATTTAGGTTTCTGGATTATTTTAGTAAGTTCGATTGGGACAATTATTGTGTCAGCATACAGGGTCCTGTTCCCATCGCCTCTCTTCCACAAATAGCGGCTGAACAACCTCAGACAGATGGAGGCAAACTGTTGCTTAGCAAGGAATTTCTGAAGACATGCATTGATAGGTACTCTGATG
TTCCAAACAGCCATGATAGTAATAGTCGACTATTCAGCTCCAAATTCTTGAATATAGTTGATCCATTACGTGAAAATAATAATCTTGGGCGGAGTGTGAGCAAAGCAAATTTCTATCGTATACGAAGTGCATTTGGATATGGAGCTCGCAAATTGGCAAAGATTCTACAATCTCCTGAAGGAAAGATTGCTGCAGAACTG
GATTGTTTTTTCCCCATTACTTGGGAGAGGCATGCAAGTGGACAACGTCAAGATGTTCCAGACTCAATATCATGGGCATTGGAATGCAGGTTTTCTGTGGAAAATGCAAGCTTCATTTCATTTTCAGAGTCAAGTGTTGAGAATGATAAGCAAGATACAAAGGATAATGCTTCAACTGAGGGAAATGGATCTCAATATGG
AGAAACGGTTGGCCAAACTAGTAATTTAAAATCTGAAACTATCAAGATTGATAAGAGTTTAATTTCATCCTCTGCTGGAGACATGTCCATAATGGCACAAAGTAATGGCACCGACTTGAACATTGTTGAAACCAAGAGCGATGATGCATCATTTAAAGAGCAGGAAGCAGCATTAGCAGCCCATGAATTCCCATATAAAT
TTTCCCCAAGCTTAGTGGTTCAACCTAACCTTAGTCCCCACTATCCAACACAAAATACTGAAACGATGTTTCTTTCACCAAAATCAAATACTGAAACCTCCCAAGTAAATGACATTTCAGCTCTCAGTTCAAATCTGTCCCACCTTCCCATGGTAACTGAAAGCACAGATTCTAACCCCTATGCATATCAGCCTACTATT
ATACCATTTTCTTCGACCAATATATATAATTCTACGTATCCAATTCAACCTGCTGTGGAAGTAGGAGGAGCTTCATATAAATCCCAAGGTAGAAATTTTGAAAATGCCAATGAAGTTATCAGGAAGAAAAGTTTAAGGGATCAGCAAGCTAGCAAAAGCACAGAGACTGGACCTATGCAGAAGATAGAAATTGTAGTTCC
TGATCCAAGGTTGGAGAGCAGGTCAACTGAGGCTGTAGTCGATGCCTTGAGTAGTCCAAGTTCTGATCTCCTCACTGGTGATTTTGAAAATCACTTGAACAATCTTGCTCATGGAAGATCATGCCAAAATCCTGTTTGGCATGGTTATATTGCACAATCTCCAGTTCTGCCTCCGTATGCCCATGAACACCTGCTATGGG
AAGGTCCCGGAAGACCTGTTCATCCTAACATGAGTATGCCCTCTCACATGCATGGCCGGGGTGTTGTTCCCAGATATCCATATTTTCCGGTTGGTTATCGAGGAGCAAATCCTCCAGTCCTGCCAGGGACCTTCAATGTTGAGGAAATGCCAAGGCCAAGAAGTGGAACGGGAACATACTTACCGAATCTGAACTATCAT
TCCTCTAGAGAGAAAAACTTTTCTAAAGGTAAGCATCAACATGGCATACTTGCACATGATTCTACTGCTCGAGAGGGTGGTGCCCACCATAGTAGTAGCAGAAGTCAAGTGGGATACAATTCAGGATCATCCTGGCAGATTGGAATAGAAAGACTGCACAAGAGTTCATATCTGCCAATTTCTCATGCAGTGATGAGGAA
CACAGCTGTGGCCTCACAACCAGGATCAGGGGCTCCAGGGCCGCACTCGCTGTCTCGTGTTAGTGTCCAGGAGGCACCTTCGTTTACAGCAGTTAGCCCATCTGGTCCTCCATTTGTCACACGTTACCCCTTTTCAAATGGTACTACTTTTCCATCTGATCCACCAGAGTTAGAAACACTTGGACCAGTACAATTCAGTA
ATGATCGCGTGAGATCAGAGTCAGGGGAGCACGTTAGCTCTGTGCTGAATGAGCAATCTTACATGTCTGGTGCAGCAGCTCCCTTACCTTCTGCCAGTGAGAGGGGACTGCAGCAACCAGCTGCCGCTTTGAAGCAGGACAGGGCAGCACCACAGAGTTACCAGATGAAGGAAGAAGATTTCCCTCCACTTTCTGTCCAA
GGGCAACATAAGGGCAGTTCAGCCACTGCTGGAAATGGTCATAGTTGCAATGATAGAAGTTAACATAGTTAAGCCCTTGTTGTAACTTGTATAACTCTTTCATCATAGTTTAACTCAAGTGAGATAAGAGCCAGGGGGCCACGTTAGCTCTGTGCTGAATGAGCAATCTTACATGTCTGGTGCAGCAGCTCCCTTACCTT
CTTCCAGTGAGAGGGAACTGCAGCAACCAGCTGCCGCTCTCAAGCAAGACAGGGCAGCACCACGGAATTACCAAATGAAGGAAGAAGATTTCAGCCACCTTCTTTCCAAGGGCAACATAAGGGCAGTTCAGCCACTGCTGGAAATGGTCATAATTGCAATGGTAGAAGTTCACAGAGTTAAGCTTTTGTTGTAACTTTTT
CATCATAGTTTTTTAATTCATGTTCAACTGCCTGATTGAGCTGCTTTCAATGCTCTGTCTAAATTCAGGCAGGAGCAGCAGCCAAAAGGTTTCTGTATATCCGATTGGTTAAATTTGGATTTAATTTATGTCTAGTTTATAGACTGTAAAGTTGTTGCCCAATTTCATTCGATAACATGCCCAGCCCATTTTTTAAGGGC
TTTAAGTCAGAATAACACCTGCCAGTGAACTGGAAATGGAAAGAAATTGTTGATGTTGTTGAGATTCTGCTGCCACCACATTCTACTTGTCTGTTGTGTATCCTATCTTGGTTACACTTACGGAATTCTACTTGTCATAGTAGTCTGAAGGCGCCGGCTGCTTTTGAGTGTTTTACCAGCGGGGATTTTAACCATTTTTT
ATTAATTACTCGTACATTTTTTTGTGAATTTGAATTTGTTTAATGAAAAGTTACATTTGATTAGAACATCGTGATGTTCATGAAGCTTTGATCGAGAGGAAATATCCGAGAGTGCAGGCAAAATGGGCTTGGCTTCTTGGAATGCATAG
Intron 8 GTTTTTGCAT ... TCATCAACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 71.45 | 19.2 | 53 | 43 |
| A2 | 70.37 | 8 | 23 | 15 |
| A3 | 67.35 | 16 | 34 | 32 |
| A4 | 67.57 | 14.6 | 29 | 31 |
| A5 | 86.67 | 1 | 6 | 7 |
| A6 | 53.85 | 6 | 10 | 4 |
| A7 | 93.94 | 1 | 16 | 15 |
| A8 | 73.97 | 7 | 23 | 16.8 |
| A9 | 69.9 | 4 | 11 | 7.6 |
| A10 | 80 | 2 | 8 | 8 |
>TRINITY_DN102247_c5_g1_i11 from sample A4 / Example spliced isoformACTAACTCTACATTTAGGTACGGCATTTGCTCTTGTATAACCCATTATAATTTCATTGAACCACTAACTACATTCTTAGGAATAAGCCGTATTTCACACTTACATTTTACCTCCTATATCTTGGCTTCTACCTTCCAAAACCCATCAAGATCACGCTAGTAAATTGATAACAGAGTTTACATCTTACTACGTGGATAAGA
ATCCTTTTTTCAGGGCTAAAGCCGAGCTTATGAGTTTAATGCAGCTACAGTGACTTGGATGATTTTAATCACTTCAATTCTTAGGAGAATCCATTATCTAGTTTTGACAGTCCTTTTCAGAAACTACACTTTGAGGAAGCCAATATACAAAAAAACTGGTTCTATTTGAGAATGATTGCATGAGCACAGAGATTAGCGGA
AACTGAACTAACTTGTAGAGAGAAAACATAAAAGTTAGTTTGCATGGGCAATCTGGACAGTTCAAAGGGAAATTTAACAGAAGAAGAATGTCCACCTTCGGCTAACCCTTTGCCCACTGCCATTGATGTTGGCATCGAGGGCTGGGATAAAGCTGAGCTTAGGACTGGAGAACTTATTTCTCAAATTCAACCAACTGTTA
TTTCAGAGAATCGAAGGAAGGCTGTTGTTCAATATGTTCAACATCTTGTTCGCCGATGTATTGGATGTGAGCTTACAAATGCATGGGCAAATGAAGTGCGTTCTGCCCTTGAAGAAGAAGGGCGAAGCAAGGATGCTAAATTTAGAGTAAAAGATGTTCAGTACATACATGCTGCTGAGGT
>TRINITY_DN102247_c5_g1_i9 from sample A4 / Example unspliced isoform:ACTAACTCTACATTTAGGTACGGCATTTGCTCTTGTATAACCCATTATAATTTCATTGAACCACTAACTACATTCTTAGGAATAAGCCGTATTTCACACTTACATTTTACCTCCTATATCTTGGCTTCTACCTTCCAAAACCCATCAAGATCACGCTAGTAAATTGATAACAGAGTTTACATCTTACTACGTGGATAAGA
ATCCTTTTTTCAGGGCTAAAGCCGAGCTTATGAGTTTAATGCAGCTACAGTGACTTGGATGATTTTAATCACTTCAATTCTTAGGAGAATCCATTATCTAGTTTTGACAGTCCTTTTCAGAAACTACACTTTGAGGAAGCCAATATACAAAAAAACTGGTTCTATTTGAGAATGATTGCATGAGCACAGAGATTAGCGGA
AACTGAACTAACTTGTAGAGAGAAAACATAAAAGTTAGTTTGCATGGGCAATCTGGACAGTTCAAAGGGAAATTTAACAGAAGAAGAATGTCCACCTTCGGCTAACCCTTTGCCCACTGCCATTGATGTTGGCATCGAGGGCTGGGATAAAGCTGAGCTTAGGACTGGAGAACTTATTTCTCAAATTCAACCAACTGTTA
TTTCAGAGAATCGAAGGAAGGCTGTTGTTCAATATGTTCAACATCTTGTTCGCCGATGTATTGGATGTGAGgtttttgcatttggatctgtgccactgaaaacatatctttctgatggagacattgatttgactgcttttggcaatcatcaacagCTTACAAATGCATGGGCAAATGAAGTGCGTTCTGCCCTTGAAGAA
GAAGGGCGAAGCAAGGATGCTAAATTTAGAGTAAAAGATGTTCAGTACATACATGCTGCTGAGGTCAGTTGAGCTTGAAAGTGTTTGCTTTTTGTCTAGACATCAGGTTCTCATTAACTTGAGAACAAGTTATCATGTTGCTTGGATGAAGTATACTTTAATTTTTACAGACTAAATAGGATTTACAATTTCAGACTGAC
CCAGTTAACAGTGAATAACTTTGTTATGTTTGAGCTTATTTATTAGAGACCTATTGAAGTTTTCTATTTCTTTTTTGATTAAATAGAAATGCTGATATACTTTCTTCTCCTAGTTTCTCCTCTTTCCTATATTTTGTTGCA