sp|F4IXE7|IDM1_ARATH ----> Increased DNA methylation 1
Intron 1 GTAGGATTAT ... GTCTCTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 13.23 | 82 | 12 | 13 |
| A2 | 3.7 | 52 | 3 | 1 |
| A3 | 8.96 | 61 | 9 | 3 |
| A4 | 12.59 | 59 | 12 | 5 |
| A5 | 11.63 | 19 | 5 | 0 |
| A6 | 42.86 | 2 | 3 | 0 |
| A7 | 12.5 | 28 | 8 | 0 |
| A8 | 5.88 | 24 | 3 | 0 |
| A9 | 0 | 21 | 0 | 0 |
| A10 | 4.92 | 29 | 3 | 0 |
>TRINITY_DN134349_c0_g1_i12 from sample A1 / Example spliced isoformATTACTTGCCGCCTACTATATCTGATCCCAGAGCCGCCAAATTAAGCGGGCGCTAAAAATAGTGGACGCCATCTAAAATCTAAATCCCCATGCTGAGATGGATCTAGGTATTAACTGGAAGTTCCCAGCTAAGCTAAACAGGAATGAGTGAGCAGCTGCTCAGCAGACTGGAACTGAGAATTCTGTGGGAAGGCCCCTTT
CAAGTAACTGCGCAGGGCGGATTCGCTGTTCTCGTGTTCGAGGTTTGAAACCTCTCTACACTCAAATATGAGTAGGAAATGCTGGAAATGGCGGTTCCCAGGAGGGAAATTACAGAAAGCTCTCTTCCGATAGGCCCAAGAAAGGTTGGAGATAGGGTTTGGTGTTTAGGGAAAAAGCATGCATAGGGTCAGCATCTTGG
AATTCAATTTGAGAGGTCGCGAGGTCGAAAATCGTAAAAGATTCAGCTCGTCGTTCTGCCGTTAAAACATAGTTTTAGTCAGAGGTCTGTCGGTTTGAAGTTAGGCATGCTGCCTTCGAAGCAGAAGAAGCTCCTCCGAGGGGAGAAGGTGGAGGTTCGACAGCACGAGGAGGGACTGCGGGGGTCGTGGCATGCTGGAG
TTGTGAAGTATGCTAGAAAATTACAGCGTTTTGTTGAGTATAACGAGCTTCTGAATGAAAAAAACAATACGAAGCTCGTTGAAAGTATTCGAGTTGGGCATGCTATTGATGGCTTGGCTAGTAGCCTGAAACAGCGTAAAACTTACAGGGGCTATATCAGGCCTCTGCCGCCAGCTTTGGAGAATTGTGAGCAGAAATGG
AGCTATGGGCTCTGCGTGGAAGCCCTTTTGGATGATGCATGGTGGGAGGGCGTGCTTTTGGACGATCACGAAGATTCCGAAGAGAGGGCGGTGTTTTTCCCGGATGAAGGTGATGAGCAGAAATTTCATGTGAAGCAACTGAGAGTGGCACAAGATTGGGATGAGTTGGAGGGGACTTGGAGTCTCCGGGGTCATTGGGT
TTTGGCCACCATGCGAGAAAGCTTTGAGCGCGAAGGTTTGTCTATTAAAGAAGTTTGGTATTACTTGAGACAGACGATGTATTTTCTGAGGAGAGTAGGAGAATGGACTGTTGGCGAAGAGAGCTTGTGGCTGAAACTCATGAAGGAAGTTATTTGGGATCGTATAAGTCAACCTCTAAATCAGTTGCCGGTAGGCGTCA
AGTCGTCCACGCAAGACTTGACATTAGCTTGTAGTTACTTGAGAAGTGGACCATGCTTAGATTCCAGTGTATTGCAAGGTTTGGCCCAAGCTCAGGAGAGCAAAAGAGATTTAGATTCTGGCTTGACTCCCCAAACGGGGGCCATGGTTCCCTGTGAAACAGTCTACTCGAAAGAGGCATTCGATTCTAGTGCTGTTCTG
GATACTTTAATGGTTGTGCAGACTGATGGTGAATATTTGAAAAATCCAAGAGAACACAGCAGTGATAAGCTATTGAAGGTTCCTGTTAGGAAGGCAGACTCGGAGGATCAGCCAAATTGTGTAGTCAACGATTTATCTGAGGTTCCATGCGGTGGAGCAGATTTTTGGGGTCAAGCAGATTGTGCAGGCAGAGATTTCTC
CAAAGTTCCAGGCAGAGGGGCTAATTCAATTAACTTAAAAGAATGCACCAGTAGCTTCTGCAATGGGGAAGTTGTGAAGGATCAATCACATTATACATGCTCAGTTGCTAGAGAATCATACAAGAATCTGGCAAATGGGTCAGATTTGCAGGGTCAGACAGATTGCCTCGACAGAGCATTATCTAAGGATTCCTCCAGCA
GGGCAGGTTCAAAAGAACAAACAGAATGTGTGAAGGTACTGTCGCATGTTCCAGCCAATGAAGCAGATTTGAAAAATAAAACAGAATGCATAGAGAAAATTATGCCCCAGTCTCCAGCCAAGGAGGCAGACTTGAAAGACCAAGCAGAATGCAAATTTGACAGAATATTATCAAAGGATATAGCCACTGGATTGGATGAT
GGGATGACCTCTACAAATGGGAGAGAATTTTCTAATGACATGTCACTTTCTTTAGCCAATCATGGAAAACCTGAACAGCATTACAGGCCAGGGCACATATCAACTCCATCATGGGAGCCTCCTCCAAAAGGAGAAACCTTTGATGCTGAATATTGTCCTCCAGCAGCCCTTAACTATAATCTTAATTTGGACAAGACTGT
AAAAAAACAAGCTCGCATAAAAGCGAAAATGCATCTTCTGTCTGTAGGATGGAGATTTGAGTTCAAATCTCGCAGGGGACGTTATGATGTTCGTTATATTTCCCCTACAGGTCAGAATTACTATTCTCTCTTACAAGCGTGTTTGGCATGGAAGCAGCAGCAGAAGGTTCAGGGAGTAATAGATGGGAATCATGAAGATA
ATGTGGAGGCTGACAAGTCAAGACAATGCATTCTGGGGGGTATTTCGTCATCTCCTTCACTGCAGAAAACTCGGGCAAGGGTTACAAGAAACATGTCTTCAACTGCTGTGTGTCCAAAGAAGTCAGGGAGAGTCTATAGTTCCACGGAGGTAGCAAAACATGAATACAGCAATAATGAAATTGCCGAGGATGCTTTGATA
AATCACATAGGAATAAAGCGACGGGTATTTAGGAGTCAAAAGATGCATAATCATGTCAATAAGAGGAGAAATGTTTCAGGTGAAACGATTCCTCTTACAGAAACAGTTACTAGGGAAAAGGAATGTACTTTGGAGTCAGAGTGCTTTGACCAGGAAAATGTGATGAGAAGTGCAAGCACAGAAGGACCAAAATTAAAAAA
ATCAAGGCAAGGTTTATTAGCAGTTTCGGGATTTAGCAGTAAAAAACAAAAACTTGGTTTAGAAGATTCGGTTGAAGGTCAGAAACGGAAAAGAGGAAGACCATGCCGCCTTGTGAAAAGAAAGGGGAAACCAGGCAATGGTTACCGAATGCAGGTAATCCCTTCTACTCCAGGAAAATCAAAGAATTTATCTTCGGGCC
AGGTTAAGCGGACTGTTCGATCGGTTTTGTCCTGGATGATAGAAAATGGCATGGTGGCCCCAAACCAGAGAGTTTTCTATTGGAATAGAAAGGAGAACTGTGCACAGGCAGAAGGCTGGATAACCTGTGATGGAATTATGTGTGCATGTTGTAAAAAGGTGTACAGTCTAACAAACTTTGAAGCTCATGCTGGGAGCAAG
AATCACCGGCCTTCTGCAAACCTCATTTTGGAAGATGGCAGATCTTTACTGCAATGCCAGATGCAGGTACTGGACAGTAAAAACAAGTTAAAGGGGCGTAGAGCTTCGTCAAGAGAAAGCAGGAAGAAAAAACCTCCTCCATTTGAAAGTGATGATGTCTGCAACATCTGTCATGTTGGTGGAACATTGATATTGTGTGA
TCATTGCCCATCTTCATTCCATTTAGAGTGCATTCAAATGAAGATTATTCCTGAAGGAAATTGGTACTGTCCAAGTTGTCGCTGTGTTTTGTGTGGGGGGAGTGAATTCAATGGTGATCCAGAATGCTTCACAGAGATGACAATTCTCCTTTGTGATCAATGCGAACGCCAGTATCATGTGGGTTGCTTATATAAAAGAG
GGATGCCGAAATTAGACTCTTGCCCCGTAGGCAATTGGTTTTGTAGTAAAAAATGCTATGAGATTTTTTCACAGCTTCGGAATCTTGTTGGAGCAGTGAATTTAGTTGGTTTTGATGGTCTTTCTTGGACAATGCTAAGGTCAAGGGTTGAAGACAATGAAAGTTGCGATCCATCAAATGCTGAAGTTATGGCAGAACAT
CACAGCAAGCTATCTGTTGCACTCACCGTTATGCATGAATGCTTTGTACCTATCATTGAATCTAGGACCAAAAAGGATCTCATCGCAGAAGTGATTTTCAATAGAGGGTTAGTAAAAATTACTTGATGTTAAAGTAGCCAGGCTGTATTGTTTAGTGGTATTTCTCTGTTTCTTGATCTATTTCTTTAATGCAAACTATT
TCATGCTGAATTCACGTGGAATTAAAGCTCAGATCAGTAAATAAAACAGAAGCCCACATTCTGGTTTCCTTATTGGACTATAGTTTGTTCTGTCAGATAATAACCCATTTTCTTGGTGCCTTTCATTTTAGTTGGCGCCTATAGTTTGTTCTGTCAGATAATAACACAATTCTGTGGATTTTTATAGACGTCTAAATACG
TCTCTAGGGAGGATTAATTTTAAGTTAAGTTGAATGTGAAATGTTTTAGAATGAAATTAATCAGAGAATTACAATATGCGTAAATAAATGAGCATAATATACTAGCATGC
>TRINITY_DN134349_c0_g1_i13 from sample A1 / Example unspliced isoform:ATTACTTGCCGCCTACTATATCTGATCCCAGAGCCGCCAAATTAAGCGGGCGCTAAAAATAGTGGACGCCATCTAAAATCTAAATCCCCATGCTGAGATGGATCTAGGTATTAACTGGAAGTTCCCAGCTAAGCTAAACAGGAATGAGTGAGCAGCTGCTCAGCAGACTGGAACTGAGAATTCTGTGGGAAGGCCCCTTT
CAAGTAACTGCGCAGGGCGGATTCGCTGTTCTCGTGTTCGAGGTTTGAAACCTCTCTACACTCAAATATGAGTAGGAAATGCTGGAAATGGCGGTTCCCAGGAGGGAAATTACAGAAAGCTCTCTTCCGATAGGCCCAAGAAAGGTTGGAGATAGGGTTTGGTGTTTAGGGAAAAAGCATGCATAGGGTCAGCATCTTGG
AATTCAATTTGAGAGGTCGCGAGGTCGAAAATCGTAAAAGATTCAGCTCGTCGTTCTGCCGTTAAAACATAGTTTTAGTCAGAGGTCTGTCGGTTTGAAGTTAGGCATGCTGCCTTCGAAGCAGAAGAAGCTCCTCCGAGGGGAGAAGGTGGAGGTTCGACAGCACGAGGAGGGACTGCGGGGGTCGTGGCATGCTGGAG
TTGTGAAGTATGCTAGAAAATTACAGCGTTTTGTTGAGTATAACGAGCTTCTGAATGAAAAAAACAATACGAAGCTCGTTGAAAGTATTCGAGTTGGGCATGCTATTGATGGCTTGGCTAGTAGCCTGAAACAGCGTAAAACTTACAGGGGCTATATCAGGCCTCTGCCGCCAGCTTTGGAGAATTGTGAGCAGAAATGG
AGCTATGGGCTCTGCGTGGAAGCCCTTTTGGATGATGCATGGTGGGAGGGCGTGCTTTTGGACGATCACGAAGATTCCGAAGAGAGGGCGGTGTTTTTCCCGGATGAAGGTGATGAGCAGAAATTTCATGTGAAGCAACTGAGAGTGGCACAAGATTGGGATGAGTTGGAGGGGACTTGGAGTCTCCGGGGTCATTGGGT
TTTGGCCACCATGCGAGAAAGCTTTGAGCGCGAAGGTTTGTCTATTAAAGAAGTTTGGTATTACTTGAGACAGACGATGTATTTTCTGAGGAGAGTAGGAGAATGGACTGTTGGCGAAGAGAGCTTGTGGCTGAAACTCATGAAGGAAGTTATTTGGGATCGTATAAGTCAACCTCTAAATCAGTTGCCGGTAGGCGTCA
AGTCGTCCACGCAAGACTTGACATTAGCTTGTAGTTACTTGAGAAGTGGACCATGCTTAGATTCCAGTGTATTGCAAGGTTTGGCCCAAGCTCAGGAGAGCAAAAGAGATTTAGATTCTGGCTTGACTCCCCAAACGGGGGCCATGGTTCCCTGTGAAACAGTCTACTCGAAAGAGGCATTCGATTCTAGTGCTGTTCTG
GATACTTTAATGGTTGTGCAGACTGATGGTGAATATTTGAAAAATCCAAGAGAACACAGCAGTGATAAGCTATTGAAGGTTCCTGTTAGGAAGGCAGACTCGGAGGATCAGCCAAATTGTGTAGTCAACGATTTATCTGAGGTTCCATGCGGTGGAGCAGATTTTTGGGGTCAAGCAGATTGTGCAGGCAGAGATTTCTC
CAAAGTTCCAGGCAGAGGGGCTAATTCAATTAACTTAAAAGAATGCACCAGTAGCTTCTGCAATGGGGAAGTTGTGAAGGATCAATCACATTATACATGCTCAGTTGCTAGAGAATCATACAAGAATCTGGCAAATGGGTCAGATTTGCAGGGTCAGACAGATTGCCTCGACAGAGCATTATCTAAGGATTCCTCCAGCA
GGGCAGGTTCAAAAGAACAAACAGAATGTGTGAAGGTACTGTCGCATGTTCCAGCCAATGAAGCAGATTTGAAAAATAAAACAGAATGCATAGAGAAAATTATGCCCCAGTCTCCAGCCAAGGAGGCAGACTTGAAAGACCAAGCAGAATGCAAATTTGACAGAATATTATCAAAGGATATAGCCACTGGATTGGATGAT
GGGATGACCTCTACAAATGGGAGAGAATTTTCTAATGACATGTCACTTTCTTTAGCCAATCATGGAAAACCTGAACAGCATTACAGGCCAGGGCACATATCAACTCCATCATGGGAGCCTCCTCCAAAAGGAGAAACCTTTGATGCTGAATATTGTCCTCCAGCAGCCCTTAACTATAATCTTAATTTGGACAAGACTGT
AAAAAAACAAGCTCGCATAAAAGCGAAAATGCATCTTCTGTCTGTAGGATGGAGATTTGAGTTCAAATCTCGCAGGGGACGTTATGATGTTCGTTATATTTCCCCTACAGGTCAGAATTACTATTCTCTCTTACAAGCGTGTTTGGCATGGAAGCAGCAGCAGAAGGTTCAGGGAGTAATAGATGGGAATCATGAAGATA
ATGTGGAGGCTGACAAGTCAAGACAATGCATTCTGGGGGGTATTTCGTCATCTCCTTCACTGCAGAAAACTCGGGCAAGGGTTACAAGAAACATGTCTTCAACTGCTGTGTGTCCAAAGAAGTCAGGGAGAGTCTATAGTTCCACGGAGGTAGCAAAACATGAATACAGCAATAATGAAATTGCCGAGGATGCTTTGATA
AATCACATAGGAATAAAGCGACGGGTATTTAGGAGTCAAAAGATGCATAATCATGTCAATAAGAGGAGAAATGTTTCAGGTGAAACGATTCCTCTTACAGAAACAGTTACTAGGGAAAAGGAATGTACTTTGGAGTCAGAGTGCTTTGACCAGGAAAATGTGATGAGAAGTGCAAGCACAGAAGGACCAAAATTAAAAAA
ATCAAGGCAAGGTTTATTAGCAGTTTCGGGATTTAGCAGTAAAAAACAAAAACTTGGTTTAGAAGATTCGGTTGAAGGTCAGAAACGGAAAAGAGGAAGACCATGCCGCCTTGTGAAAAGAAAGGGGAAACCAGGCAATGGTTACCGAATGCAGGTAATCCCTTCTACTCCAGGAAAATCAAAGAATTTATCTTCGGGCC
AGGTTAAGCGGACTGTTCGATCGGTTTTGTCCTGGATGATAGAAAATGGCATGGTGGCCCCAAACCAGAGAGTTTTCTATTGGAATAGAAAGGAGAACTGTGCACAGGCAGAAGGCTGGATAACCTGTGATGGAATTATGTGTGCATGTTGTAAAAAGGTGTACAGTCTAACAAACTTTGAAGCTCATGCTGGGAGCAAG
AATCACCGGCCTTCTGCAAACCTCATTTTGGAAGATGGCAGATCTTTACTGCAATGCCAGATGCAGGTACTGGACAGTAAAAACAAGTTAAAGGGGCGTAGAGCTTCGTCAAGAGAAAGCAGGAAGAAAAAACCTCCTCCATTTGAAAGTGATGATGTCTGCAACATCTGTCATGTTGGTGGAACATTGATATTGTGTGA
TCATTGCCCATCTTCATTCCATTTAGAGTGCATTCAAATGAAGATTATTCCTGAAGGAAATTGGTACTGTCCAAGTTGTCGCTGTGTTTTGTGTGGGGGGAGTGAATTCAATGGTGATCCAGAATGCTTCACAGAGATGACAATTCTCCTTTGTGATCAATGCGAACGCCAGTgtaggattatgccctctatattaagat
aaagtgttttgttgtttttaacttgattgctcttgtactgatgcatcttcatccagatcattcaaatatttaaaacttcaatatggtatgtctctgcagATCATGTGGGTTGCTTATATAAAAGAGGGATGCCGAAATTAGACTCTTGCCCCGTAGGCAATTGGTTTTGTAGTAAAAAATGCTATGAGGTAAACATGGTC
TTTACTGCCATTCTTTCTATGTCAATTAATATTGCTTCTCTGCCTGATTCAAAAGATGCTGTATCCATGTAAGTGGGAGAAATGTTATTCAAAATTTTGATTTAGGAAGATATATTGAATTAATTGGCATACTAAAACGGCATTACTGTTGTAAATAAGGGGAAATTCTTTTGCAATAGATCTGGGACATAGTGATCTGG
GACATAGTGCCAAGGATTAAGTCAAAACCTTTGCTTTGAATTTACGTTAAAATTAGAACAAAGCATGAGAACAATTCTAAAGAGAGTGGTATATTCATATGAAATGACGCAAAGCTTTTAAGTTTTTT
Intron 2 GTAAGGGATT ... ATTTGGGTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 27.2 | 61.8 | 2.5 | 23 |
| A2 | 32.72 | 43.5 | 2 | 21 |
| A3 | 26.89 | 32.8 | 0 | 12 |
| A4 | 21.07 | 48.8 | 0.5 | 13 |
| A5 | 13.54 | 13 | 3 | 2 |
| A6 | 0 | 5 | 0 | 0 |
| A7 | 25.48 | 41 | 0 | 14 |
| A8 | 32.76 | 18.5 | 0 | 9 |
| A9 | 34.56 | 24.8 | 0 | 13 |
| A10 | 14.38 | 6.3 | 0 | 1 |
>TRINITY_DN134349_c0_g1_i10 from sample A1 / Example spliced isoformATTACTTGCCGCCTACTATATCTGATCCCAGAGCCGCCAAATTAAGCGGGCGCTAAAAATAGTGGACGCCATCTAAAATCTAAATCCCCATGCTGAGATGGATCTAGGTATTAACTGGAAGTTCCCAGCTAAGCTAAACAGGAATGAGTGAGCAGCTGCTCAGCAGACTGGAACTGAGAATTCTGTGGGAAGGCCCCTTT
CAAGTAACTGCGCAGGGCGGATTCGCTGTTCTCGTGTTCGAGGTTTGAAACCTCTCTACACTCAAATATGAGTAGGAAATGCTGGAAATGGCGGTTCCCAGGAGGGAAATTACAGAAAGCTCTCTTCCGATAGGCCCAAGAAAGGTTGGAGATAGGGTTTGGTGTTTAGGGAAAAAGCATGCATAGGGTCAGCATCTTGG
AATTCAATTTGAGAGGTCGCGAGGTCGAAAATCGTAAAAGATTCAGCTCGTCGTTCTGCCGTTAAAACATAGTTTTAGTCAGAGGTCTGTCGGTTTGAAGTTAGGCATGCTGCCTTCGAAGCAGAAGAAGCTCCTCCGAGGGGAGAAGGTGGAGGTTCGACAGCACGAGGAGGGACTGCGGGGGTCGTGGCATGCTGGAG
TTGTGAAGTATGCTAGAAAATTACAGCGTTTTGTTGAGTATAACGAGCTTCTGAATGAAAAAAACAATACGAAGCTCGTTGAAAGTATTCGAGTTGGGCATGCTATTGATGGCTTGGCTAGTAGCCTGAAACAGCGTAAAACTTACAGGGGCTATATCAGGCCTCTGCCGCCAGCTTTGGAGAATTGTGAGCAGAAATGG
AGCTATGGGCTCTGCGTGGAAGCCCTTTTGGATGATGCATGGTGGGAGGGCGTGCTTTTGGACGATCACGAAGATTCCGAAGAGAGGGCGGTGTTTTTCCCGGATGAAGGTGATGAGCAGAAATTTCATGTGAAGCAACTGAGAGTGGCACAAGATTGGGATGAGTTGGAGGGGACTTGGAGTCTCCGGGGTCATTGGGT
TTTGGCCACCATGCGAGAAAGCTTTGAGCGCGAAGGTTTGTCTATTAAAGAAGTTTGGTATTACTTGAGACAGACGATGTATTTTCTGAGGAGAGTAGGAGAATGGACTGTTGGCGAAGAGAGCTTGTGGCTGAAACTCATGAAGGAAGTTATTTGGGATCGTATAAGTCAACCTCTAAATCAGTTGCCGGTAGGCGTCA
AGTCGTCCACGCAAGACTTGACATTAGCTTGTAGTTACTTGAGAAGTGGACCATGCTTAGATTCCAGTGTATTGCAAGGTTTGGCCCAAGCTCAGGAGAGCAAAAGAGATTTAGATTCTGGCTTGACTCCCCAAACGGGGGCCATGGTTCCCTGTGAAACAGTCTACTCGAAAGAGGCATTCGATTCTAGTGCTGTTCTG
GATACTTTAATGGTTGTGCAGACTGATGGTGAATATTTGAAAAATCCAAGAGAACACAGCAGTGATAAGCTATTGAAGGTTCCTGTTAGGAAGGCAGACTCGGAGGATCAGCCAAATTGTGTAGTCAACGATTTATCTGAGGTTCCATGCGGTGGAGCAGATTTTTGGGGTCAAGCAGATTGTGCAGGCAGAGATTTCTC
CAAAGTTCCAGGCAGAGGGGCTAATTCAATTAACTTAAAAGAATGCACCAGTAGCTTCTGCAATGGGGAAGTTGTGAAGGATCAATCACATTATACATGCTCAGTTGCTAGAGAATCATACAAGAATCTGGCAAATGGGTCAGATTTGCAGGGTCAGACAGATTGCCTCGACAGAGCATTATCTAAGGATTCCTCCAGCA
GGGCAGGTTCAAAAGAACAAACAGAATGTGTGAAGGTACTGTCGCATGTTCCAGCCAATGAAGCAGATTTGAAAAATAAAACAGAATGCATAGAGAAAATTATGCCCCAGTCTCCAGCCAAGGAGGCAGACTTGAAAGACCAAGCAGAATGCAAATTTGACAGAATATTATCAAAGGATATAGCCACTGGATTGGATGAT
GGGATGACCTCTACAAATGGGAGAGAATTTTCTAATGACATGTCACTTTCTTTAGCCAATCATGGAAAACCTGAACAGCATTACAGGCCAGGGCACATATCAACTCCATCATGGGAGCCTCCTCCAAAAGGAGAAACCTTTGATGCTGAATATTGTCCTCCAGCAGCCCTTAACTATAATCTTAATTTGGACAAGACTGT
AAAAAAACAAGCTCGCATAAAAGCGAAAATGCATCTTCTGTCTGTAGGATGGAGATTTGAGTTCAAATCTCGCAGGGGACGTTATGATGTTCGTTATATTTCCCCTACAGGTCAGAATTACTATTCTCTCTTACAAGCGTGTTTGGCATGGAAGCAGCAGCAGAAGGTTCAGGGAGTAATAGATGGGAATCATGAAGATA
ATGTGGAGGCTGACAAGTCAAGACAATGCATTCTGGGGGGTATTTCGTCATCTCCTTCACTGCAGAAAACTCGGGCAAGGGTTACAAGAAACATGTCTTCAACTGCTGTGTGTCCAAAGAAGTCAGGGAGAGTCTATAGTTCCACGGAGGTAGCAAAACATGAATACAGCAATAATGAAATTGCCGAGGATGCTTTGATA
AATCACATAGGAATAAAGCGACGGGTATTTAGGAGTCAAAAGATGCATAATCATGTCAATAAGAGGAGAAATGTTTCAGGTGAAACGATTCCTCTTACAGAAACAGTTACTAGGGAAAAGGAATGTACTTTGGAGTCAGAGTGCTTTGACCAGGAAAATGTGATGAGAAGTGCAAGCACAGAAGGACCAAAATTAAAAAA
ATCAAGGCAAGGTTTATTAGCAGTTTCGGGATTTAGCAGTAAAAAACAAAAACTTGGTTTAGAAGATTCGGTTGAAGGTCAGAAACGGAAAAGAGGAAGACCATGCCGCCTTGTGAAAAGAAAGGGGAAACCAGGCAATGGTTACCGAATGCAGGTAATCCCTTCTACTCCAGGAAAATCAAAGAATTTATCTTCGGGCC
AGGTTAAGCGGACTGTTCGATCGGTTTTGTCCTGGATGATAGAAAATGGCATGGTGGCCCCAAACCAGAGAGTTTTCTATTGGAATAGAAAGGAGAACTGTGCACAGGCAGAAGGCTGGATAACCTGTGATGGAATTATGTGTGCATGTTGTAAAAAGGTGTACAGTCTAACAAACTTTGAAGCTCATGCTGGGAGCAAG
AATCACCGGCCTTCTGCAAACCTCATTTTGGAAGATGGCAGATCTTTACTGCAATGCCAGATGCAGGTACTGGACAGTAAAAACAAGTTAAAGGGGCGTAGAGCTTCGTCAAGAGAAAGCAGGAAGAAAAAACCTCCTCCATTTGAAAGTGATGATGTCTGCAACATCTGTCATGTTGGTGGAACATTGATATTGTGTGA
TCATTGCCCATCTTCATTCCATTTAGAGTGCATTCAAATGAAGATTATTCCTGAAGGAAATTGGTACTGTCCAAGTTGTCGCTGTGTTTTGTGTGGGGGGAGTGAATTCAATGGTGATCCAGAATGCTTCACAGAGATGACAATTCTCCTTTGTGATCAATGCGAACGCCAGTATCATGTGGGTTGCTTATATAAAAGAG
GGATGCCGAAATTAGACTCTTGCCCCGTAGGCAATTGGTTTTGTAGTAAAAAATGCTATGAGATTTTTTCACAGCTTCGGAATCTTGTTGGAGCAGTGAATTTAGTTGGTTTTGATGGTCTTTCTTGGACAATGCTAAGGTCAAGGGTTGAAGACAATGAAAGTTGCGATCCATCAAATGCTGAAGTTATGGCAGAACAT
CACAGCAAGCTATCTGTTGCACTCACCGTTATGCATGAATGCTTTGTACCTATCATTGAATCTAGGACCAAAAAGGATCTCATCGCAGAAGTGATTTTCAATAGAGGGTCTGATATAAATCGGTTAAATTTTCGTGGATTTTATACGATAATATTGGAAAGAGGAGATGAACTTATATCTGTGGCCACTCTGAGAATTCA
TGGAGAAAGAGTTGCCGAAATGCCTTTCATTGGCACCCGTGTGGAGTATCGTCGTAAAGGAATGTGTCGCATTCTCGTCAATGAACTTGAGAAGCTGCTTCATTCGATAGGGGTGGAAAAGCTGATTTTGCCAGCAGTGTCGGAGCTTAAGCAGACATGGGAAAATGCATTTGGGTTTCAGGAGATAAGTTCTGTTGAGA
GATTAAAGCTGTTAGATCTCAGTTTTGTAGGTTTTCCGGACACTGTAGTTCTTCAGAAGTTACTTACAAGGCAGAGCCCAGAACAGGAAATAGTTACAGGTACAGCTGTTAGTGAAAATGGAGTTGATTTGCCACGTCTCAGTCTAGGATGCGACTTTGAGAAAGGAACTCAATCTGAGATTGTGGAGATTACTACTTCT
AAAATAGGACCTTCTTACACTGAAGTTGAAGATATTGTGACTCCTATTTGTAGTTTACCTTGTGATGCTCACACATGTTCAGCGTGGCACACTAAATCCGAAGGAGAGAGCTGCGTTGATAACAAAATGGGGAAGTCTTTGTTAAAAGGTCACCGGGTTTCTGGATCAACTTCTGCTTCAAAAGAAACGAACACAATCCA
AGAAAATATAACTGAAGATATCTGCCAGTCTGAA
>TRINITY_DN134349_c0_g1_i6 from sample A1 / Example unspliced isoform:CTTATATCTGTGGCCACTCTGAGgtaagggattgatgtttatgcttcccagttcatagcattgaatgtatttttaataaatggttcttttactttttgtttcaactcccgaacatttgccattcactggtaatgtggtctcaaatgcggaatctcatttgccaccttttatttgggtagAATTCATGGAGAAAGAGTTGC
CGAAATGCCTTTCATTGGCACCCGTGTGGAGTATCGTCGTAAAGGAATGTGTCGCATTCTCGTCAATGAACTTGAGAAGCTGCTTCATTCGATAGGGGTGGAAAAGCTGATTTTGCCAGCAGTGTCGGAGCTTAAGCAGACATGGGAAAATGCATTTGGGTTTCAGGAGATAAGTTCTGTTGAGAGATTAAAGCTGTTAG
ATCTCAGTTTTGTAGGTTTTCCGGACACTGTAGTTCTTCAGAAGTTACTTACAAGGCAGAGCCCAGAACAGGAAATAGTTACAGGTACAGCTGTTAGTGAAAATGGAGTTGATTTGCCACGTCTCAGTCTAGGATGCGACTTTGAGAAAGGAACTCAATCTGAGATTGTGGAGATTACTACTTCTAAAATAGGACCTTCT
TACACTGAAGTTGAAGATATTGTGACTCCTATTTGTAGTTTACCTTGTGATGCTCACACATGTTCAGCGTGGCACACTAAATCCGAAGGAGAGAGCTGCGTTGATAACAAAATGGGGAAGTCTTTGTTAAAAGGTCACCGGGTTTCTGGATCAACTTCTGCTTCAAAAGAAACGAACACAATCCAAGAAAATATAACTGA
AGATATCTGCCAGTCTGAAATCAATCAATTATGGAAATTATTAAGATAAAGAGCAATTTTGTCAGTGCTGCAAACATGCCTTAGGTACTTCTGTGGATGATGATGTGGATGATGATGATGTGGATGATGAATCTGTGGTGGTTGTTGGAACTACACGCTCAAATCGTCTGGTTAGACAAGTAAGATGGAAAGTTGCATAT
TCATATCGCAGAAATGAACCTAAACCAGATATATCAGAGGAGCTTCGATCCAATGACAAGGGAACTGTAGTCAAAAGGAAGAGGAGGAGTGAAGGTAATATCTACAAGAGGAGGAGGAAGGAGCAAAATGTCACACACAATAATTGCTCTGTCATCACCTGTTCCACCTTGTTGCAATCATCAAATAACAAGGATATTCA
GTTTGGTTTATTTGGAGTGAGGAAAGCTGACATACAAGTATCAACGGGCTGTGGGTCAGGTTCAGCAGCAGCTTTGGAAGCAAGTACATCTTTATTTGATAGATCTAAATTCCCTAGAGGTGGGTCAGAATATGAACATTCATATAAATCAGAAGACTACAAAGGAAATGGAGTTGGTAATTCAGATTATCCATGCTCTA
ATGAATTCTACAGGAAAGATGGATTTGGGTCTTTCAAGTATTTTTATAGCCGCCGAAGAAAACAAATATGTGCTGGAAATGTTTTGTCTGGTAAGCTCCAGTCTGATATATCATTACCAGTAAGATCTTCCAGTTTGCAATCACATACAGTATGCTGATACAGATATTCATGACAATACAGAAAAAACTGTATTACCATA
GCAAATTTGTTTCTTGCATGTATGGTTCCAACAATGAGCTGCATGCAATTATGCCATGGAGAAAAGTGGCATAAATTCTTCTGGAAAAAATCAAACACTGAATGTTAATGTACAATGTTGAAATCATAAATTCTTTACCAGAAGTGTGCACTGGAAATGGTTGAATTGCTCGGTTACCAGAATTTCAATACCCATGTACA
AAGTTGGTACATGTTTATCTGGCCAAATGGGGATTTTGTACTTGTGAACCATAACTTTTCTTGGCCAATTACTTCTCTGATTGGCATGGAAGCATGCTAAGCCTTAGGGTGATCAAAGGGGCAATATCCTAAAAGATATATGGCCATGATCTTTGTGGAAAATATCAGTATGAGCTGCAGCTGTGTTGAGCATCATTGAA
AATTGATAGTGCAATGTGAATATAGCATCAGTATGGGGCTGAAGTAAGCTTACAGAATATAATATATATTGACAAAAGAGAGCAATTATCTCTGATTCAGACACTGGTTGTAAAATATGATCGCCGCTCCATTGGTCATGGTGTTGTCTGTTCAATCAATGAAGGACAGATTTTGAAACACCTAAATCTTTTAGTTTTGA
TTTATCAGGAAGCCAATGTGGTTTTTTAAAAGTTGAGAGATATCTCAACCGGGGATTTGTTGGCTTACGCATGAGTGCTTAGGCAAATCTGTAGTAAAAAATGTCCAAGGAATTAGTGTAAAGTTTCTTGTTTCATTTTGGAGGAATTACGAAGAAAGAGGCAAGTTGTGTCAATATTTGAGTTATACTGTGATCCACTT
TAAAGTTTACATGCATTCTTTAGAGTCTTTTCTCTGTTTCTTGAGTGTAAAGTATGTGTAAAACTTTACAGAACATGATTGTACCAAGAAACCAATGTGCCCACCCAGATTCTTGTTGCCTTGTCTTTTCAAAATATTCCGAGGATTGCACATCTCCCTTTTCTTTTGGAACAATAAATACTACATATCATTGTCTTCAT
TTTTTACATTTGTATACTGCTATTTACTCCCTCGTGAAGAATAAAACAATAATTTGCTAGTAATTTTATAAGTGGTTGTA