NA ----> NA
Intron 1 GTAGCATACA ... CTTTACGAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 17.79 | 245 | 69 | 37 |
| A2 | 16.31 | 136 | 23 | 30 |
| A3 | 18.34 | 207 | 37 | 56 |
| A4 | 17.12 | 92 | 19 | 19 |
| A5 | 14.74 | 81 | 15 | 13 |
| A6 | 20.24 | 528 | 128 | 140 |
| A7 | 19.09 | 814 | 183 | 201 |
| A8 | 18.74 | 785 | 172 | 190 |
| A9 | 19.03 | 787 | 195 | 175 |
| A10 | 19.9 | 650 | 158 | 165 |
>TRINITY_DN36106_c0_g1_i1 from sample A6 / Example spliced isoformAAATCAATAAAAAAGCGAAAGAGGGAGTCGCACAGATGGGAGGGATGGAACATTATTTGTGAATGATATGTATGATATGATGGGCGAATGGCAATAGCAGAAGGATTGCAATAGCAATTTTGGGTATTAAGTCATCCGTATTAAGCCAAGGCGATCCTTTCCTGTCCCTGCATGTATGTCGATTATCAGCTGACACGCAC
ACATATTGTCTTTTGACCCTCAGCTAGATCTGCTCTGCCCTGTCCACTCAGCGTTTCGGCAATTGCCATGTCAGTTTGAGACTATCTGTAGCGGAGAATGGGCTGCGTCGGATCCTCAGAGAAGGCCGTTGATGGGCATTCAAAAAAGATACGAAAACCAAAGCCTTGGAAACATTCAGAGCCGATCACACGAGCACAAC
TTAAACAAATGCGTGATGAGTTTTGGGACACAGCACCTCATTATGGTGGGCAGAAAGAGATTTGGGATGCCTTACGAGCAGCAGCTGAGGCTGACTTGGGACTGGCACGGGCAATAGTTGATAGTGCAGGCATAATTGTCACTAGTGAAGATATGACAACCTGTTATGACGAAAGAGGTGCAAAATACGATCTTCCAAAG
TATGTCCTGACCGAGCCAACTAATCTTATAAAAGACGAGTAATGGCACCGACAAGGCCCAACTCAGTGCATGCAAAGGAGTTTGATGTAACATATTCTGTAAAACACATTTACTTGTGAAAAGATTTCTTCTTCGGTTTTTTGTGACGTTTAAACTTTAAAGCAAAGATAAAACCCATTTGTTTCCTCGATCATGCATCC
TGTCAACCGGCCTGATATTTAGAGGCAAGTGAAATCTAATCATTTACTCGATCTTGAATCCATCTCTGCCAATGACATTTGCTTATCCATGCTTTCGCTGATAGACAATGTGGAATGGCACACCCATGCGAAAGAATCTTAAAAGATTCTTTTACATTGCTAGCTCAAGTAAGAACTGCCTTTGTATCCATGCTTTCTGT
GATAGACAATGTGGAGTCGCATACTGACGTGGAAGAATCTTAAAAGATTCTTTTACATTGCTAGATCAAGTCAGAACTGCCTTTGCCTTAAAAGGTGCAGGATATTGGCAAAGGTGGAAAACAATCAGTACAGTGATTTCGGGTGCTGGTTTTTGTTGTTTTAGTATGCGGTTGCCTTCATACCTATTTGGCATCTCTTC
TTTGATTGCAAGGTGATTTCTGCATTTTTTTCCATATTGTATCAAAAACCAAGTCGAGCAAAATGGATATACCTATATTTACAATTGTTGTGTTACGCTGAAAAAGTTATAATGAAAATAAAAGAAATCAAAGCTACTTCCTTTTCTTCGAAAA
>TRINITY_DN36106_c0_g1_i2 from sample A6 / Example unspliced isoform:AAATCAATAAAAAAGCGAAAGAGGGAGTCGCACAGATGGGAGGGATGGAACATTATTTGTGAATGATATGTATGATATGATGGGCGAATGGCAATAGCAGAAGGATTGCAATAGCAATTTTGGGTATTAAGTCATCCGTATTAAGCCAAGGCGATCCTTTCCTGTCCCTGCATGTATGTCGATTATCAGCTGACACGCAC
ACATATTGTCTTTTGACCCTCAGCTAGATCTGCTCTGCCCTGTCCACTCAGCGTTTCGGCAATTGCCATGTCAGTTTGAGACTATCTGTAGCGGAGAATGGGCTGCGTCGGATCCTCAGAGAAGGCCGTTGATGGGCATTCAAAAAAGATACGAAAACCAAAGCCTTGGAAACATTCAGAGCCGATCACACGAGCACAAC
TTAAACAAATGCGTGATGAGTTTTGGGACACAGCACCTCATTATGGTGGGCAGAAAGgtagcatacatctacactcaaatgtgagagctagaggtgttaagttagttagacagctgatgggagtttctttacgaagAGATTTGGGATGCCTTACGAGCAGCAGCTGAGGCTGACTTGGGACTGGCACGGGCAATAGTTGA
TAGTGCAGGCATAATTGTCACTAGTGAAGATATGACAACCTGTTATGACGAAAGAGGTGCAAAATACGATCTTCCAAAGTATGTCCTGACCGAGCCAACTAATCTTATAAAAGACGAGTAATGGCACCGACAAGGCCCAACTCAGTGCATGCAAAGGAGTTTGATGTAACATATTCTGTAAAACACATTTACTTGTGAAA
AGATTTCTTCTTCGGTTTTTTGTGACGTTTAAACTTTAAAGCAAAGATAAAACCCATTTGTTTCCTCGATCATGCATCCTGTCAACCGGCCTGATATTTAGAGGCAAGTGAAATCTAATCATTTACTCGATCTTGAATCCATCTCTGCCAATGACATTTGCTTATCCATGCTTTCGCTGATAGACAATGTGGAATGGCAC
ACCCATGCGAAAGAATCTTAAAAGATTCTTTTACATTGCTAGCTCAAGTAAGAACTGCCTTTGTATCCATGCTTTCTGTGATAGACAATGTGGAGTCGCATACTGACGTGGAAGAATCTTAAAAGATTCTTTTACATTGCTAGATCAAGTCAGAACTGCCTTTGCCTTAAAAGGTGCAGGATATTGGCAAAGGTGGAAAA
CAATCAGTACAGTGATTTCGGGTGCTGGTTTTTGTTGTTTTAGTATGCGGTTGCCTTCATACCTATTTGGCATCTCTTCTTTGATTGCAAGGTGATTTCTGCATTTTTTTCCATATTGTATCAAAAACCAAGTCGAGCAAAATGGATATACCTATATTTACAATTGTTGTGTTACGCTGAAAAAGTTATAATGAAAATAA
AAGAAATCAAAGCTACTTCCTTTTCTTCGAAAA