sp|Q9SU25|T2FA_ARATH ----> Transcription initiation factor IIF subunit alpha
Intron 1 GTATGAGTTT ... TTACCAAAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 74.11 | 40 | 110 | 119 |
| A2 | 65.08 | 55 | 100 | 105 |
| A3 | 69.6 | 44 | 89 | 112.5 |
| A4 | 59.81 | 22 | 34 | 31.5 |
| A5 | 65.35 | 11 | 22 | 19.5 |
| A6 | 54.75 | 25 | 30 | 30.5 |
| A7 | 71.34 | 123 | 267 | 345.5 |
| A8 | 70.8 | 136 | 283 | 376.5 |
| A9 | 70.61 | 163 | 371 | 412 |
| A10 | 68.03 | 166 | 335 | 371.5 |
>TRINITY_DN96495_c0_g2_i3 from sample A4 / Example spliced isoformGAGAAAACGACCGTAACCGTATTGGTGGCGCAGTATAAATGGATTGGCGTCGATATGGATTCTGGTGCTTGCTTCCTCCGGTCCTCACCTCATCCACAACAAGGCAGAGCCGAGCCGCAGAGCAAGCCAGATTCAAATTCAAAGCCGAGCGTTATAATTCTTCTTCGTGTCTGTTCTGCGGTTTGTTGTCGTATACATGG
AGTACGCCAAGGAAAACGCCAAGTGCATGCAATGCGAGAACGGCAAGGATCTGTACGCATCCTATTGTAAGCATTTAGACCCCATCTGCATCACTTGCGCTACCAGCATGGCAAAGGAGAAGACTCCATGCCCTACATGTCACCAACTCTTCACTAAAGTCTTCCGGCGCTACGAGTTGAAACCATGTTCGCCTGGAGAT
ACCATCAAGTTTCTTGTCAAGTTTCCCCCCAAACTTAGTGGTATCGTGGACCTCCAAGGCGCAGAGAAGCAGCCGGCTGATGCCGGAAAAAGCAATACTGACAACAAATATTTCAAAAAATCTGACAGACGCAGGTGGATCATGTGCAAAGACGGTGCCGAGGGCAAACGAAATAATTTGAAAACCGACACTAGGCCGTG
GATATTGGAAAATGTGAAGGATAAAGGCAAGTACAAGGGCAAAGCAAAACCAGTTGACAACAACATGTATTACATGGTTCAGTTCGATGGCAAAAGGATGGGCGACCCCCTCGTTGTCTACCCAATTAAGTCATGGTGAAGACTGGGAACATGAGGGGGGATTTACAGATGATAACTTGTCAACTTCTTCTGAAGACTCT
GAATCTGAAGGAGTTCCTTCCGATATGTCGGATGCCAGAAATGCAGAGAAGCCAACAACAGAGCAAAAACACAGAAAGAGAAAGGCCACTGAGGTGAAATTGCAGGAGTCTGAAGCTCATCAACCTCCAAAGAAAGCAAAAGATACATCTCGAGGTAAATCACAAGAATCTGAAGCTCAAAAGAAAGAAAATGAAAAACC
TTCTTTGGACATGCAATTGCGTGAATTTCTACAGAAGGGGAAAGATAAAGAAGAAATGAGAAGTTTCCTCCGCCAAAACGCTAAAGGGAAGTGATATTTGATGATATTTGAAACTACTTGGATATATATCAACAACTTGCTTAAACTCGGTGAATGATGTGTACTTACTTTGATAAGCATTGGTGAATGGTGGCAAAACT
GTGTGTAAAATCTAAGTTGAATAATCAGAGATTGATATTTGTTGAATTAGATTGCGACAACATTTGCATTGAGTTTGGTGATGTATTTTATGATTTTGACAAGCTTATTGCTCTATACAAGGTCTGATTTTCTCCTTTTTCAAGGTGTTGTCTGCTGCTACAGTCATAATTTTTTCAGATCTGGAAAGTGCACTTATTGT
ATCAAAATACCGAGTTACCTACTGAATGCTAAGATATTAC
>TRINITY_DN96495_c0_g2_i4 from sample A4 / Example unspliced isoform:GAGAAAACGACCGTAACCGTATTGGTGGCGCAGTATAAATGGATTGGCGTCGATATGGATTCTGGTGCTTGCTTCCTCCGGTCCTCACCTCATCCACAACAAGGCAGAGCCGAGCCGCAGAGCAAGCCAGATTCAAATTCAAAGCCGAGCGTTATAATTCTTCTTCGTGTCTGTTCTGCGGTTTGTTGTCGTATACATGG
AGTACGCCAAGGAAAACGCCAAGTGCATGCAATGCGAGAACGGCAAGGATCTGTACGCATCCTATTGTAAGCATTTAGACCCCATCTGCATCACTTGCGCTACCAGCATGGCAAAGGAGAAGACTCCATGCCCTACATGTCACCAACTCTTCACTAAAGTCTTCCGGCGCTACGAGTTGAAACCATGTTCGCCTGGAGAT
ACCATCAAGTTTCTTGTCAAGTTTCCCCCCAAACTTAGTGGTATCGTGGACCTCCAAGGCGCAGAGAAGCAGCCGGCTGATGCCGGAAAAAGCAATACTGACAACAAATATTTCAAAAAATCTGACAGACGCAGGTGGATCATGTGCAAAGACGGTGCCGAGGGCAAACGAAATAATTTGAAAACCGACACTAGGCCGTG
GATATTGGAAAATGTGAAGGATAAAGGCAAGTACAAGGGCAAAGCAAAACCAGTTGACAACAACATGTATTACATGGTTCAGTTCGATGGCAAAAGGATGGGCGACCCCCTCGTTGTCTACCCAATTAAGTCATGgtatgagtttgaaagtgaaattcaacacaagacattaacaacagaggaggctgaaaacataatta
aatctcgcaaaaggaatgacgaaggatacagcagatggatagtgaaagaaagcggggaaaatgacaaaatggaatatgtcgatggacaacatgagaatgatgagactaggaagcagaaacaaataaaaaaagaagatgatagtgaccatgatgaagaagagaaaaaatccaaccctgatgagaatgatttaccaaaagGT
GAAGACTGGGAACATGAGGGGGGATTTACAGATGATAACTTGTCAACTTCTTCTGAAGACTCTGAATCTGAAGGAGTTCCTTCCGATATGTCGGATGCCAGAAATGCAGAGAAGCCAACAACAGAGCAAAAACACAGAAAGAGAAAGGCCACTGAGGTGAAATTGCAGGAGTCTGAAGCTCATCAACCTCCAAAGAAAGC
AAAAGATACATCTCGAGGTAAATCACAAGAATCTGAAGCTCAAAAGAAAGAAAATGAAAAACCTTCTTTGGACATGCAATTGCGTGAATTTCTACAGAAGGGGAAAGATAAAGAAGAAATGAGAAGTTTCCTCCGCCAAAACGCTAAAGGGAAGTGATATTTGATGATATTTGAAACTACTTGGATATATATCAACAACT
TGCTTAAACTCGGTGAATGATGTGTACTTACTTTGATAAGCATTGGTGAATGGTGGCAAAACTGTGTGTAAAATCTAAGTTGAATAATCAGAGATTGATATTTGTTGAATTAGATTGCGACAACATTTGCATTGAGTTTGGTGATGTATTTTATGATTTTGACAAGCTTATTGCTCTATACAAGGTCTGATTTTCTCCTT
TTTCAAGGTGTTGTCTGCTGCTACAGTCATAATTTTTTCAGATCTGGAAAGTGCACTTATTGTATCAAAATACCGAGTTACCTACTGAATGCTAAGATATTAC