NA ----> NA

Intron 1 GCAAGTAGAG ... GCATGCGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	22.12	22.7	0	6
A2	17.19	14.7	0	3
A3	21.01	31.3	0	8
A4	40.14	20.7	2	13
A5	41.27	6.3	2	4
A6	24.64	568.7	0	182
A7	21.05	556.7	0	145
A8	21.88	820.3	1	223
A9	22.84	752	4	216
A10	25.03	507	2	164

>TRINITY_DN101716_c0_g1_i3 from sample A5 / Example spliced isoform

GTTTGGGCACCAGTGGAGTATCACCGTCGTAAGTAAGAAGTCGGAGTTTTGTTGTCATTGGGTTTCAGTAGCTAAGTACAGATTCCCAGCAGCTCTAAGTTCTGTAGTGGCCAGCAGCATGGATACTGCCTTCCCTGTTTTAAATATCTTACAACCATCACATCGCAATCCTCAATCACAGCCACAGCCTAACCCTGGCA
ATTTTATCAACAAACCCAATCAGGCCTTCAACCCCAACATGGGCTACAACCCCACCATCGTCTACAAGCCCAACGCGGCCAATACCATGACCAATAGCAATCGAAATGCAGGCCCAATGACCAACAAACCCAACCAGAGCTTCAACCCCAACATGGCCTACAACCCCAACATCGCCTACAACCCCAACGCGGCCAATACC
ATGAGAAACTGAGGGATGGGAGATACTTAACAGAGTCATGCTCGACTGACTGTGTGCTCCTATGGTGAAATACAGTCATGTTCTACTGACTGTGTGATCCTATGGCGAAGTACTACACAGCCAAATGCTCTGTATCATCTGAATTCAGTAATAAGCATAAACGTTCGCAGTATTATTACATTAATGCATGTTATAACTAC
GATTATGTGTTCCTCATTACCATGCTTTTAATGGCTTGATATATGAAGGCAAACTATTTAGTTAAGTAGATGAAATTCTGC

>TRINITY_DN101716_c0_g1_i4 from sample A5 / Example unspliced isoform:

GCCAATACCATGAGAAACTGAGgcaagtagagcaacttataatcagcatcaattgttttacctttgatctgcacaaatatgtcatgattttcctttcttttgcttaaatattgcattgcttttgcatgcgcagGGATGGGAGATACTTAACAGAGTCATGCTCGACTGACTGTGTGCTCCTATGGTGAAATACAGTCATG
TTCTACTGACTGTGTGATCCTATGGCGAAGTACTACACAGCCAAATGCTCTGTATCATCTGAATTCAGTAATAAGCATAAACGTTCGCAGTATTATTACATTAATGCATGTTATAACTACGATTATGTGTTCCTCATTACCATGCTTTTAATGGCTTGATATATGAAGGCAAACTATTTAGTTAAGTAGATGAAATTCTG
C