sp|Q5RJC5|C3H67_ARATH ----> Zinc finger CCCH domain-containing protein 67
Intron 1 GTAGGGTTTT ... ATCATTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 63.23 | 62 | 113.6 | 99.7 |
| A2 | 59.47 | 51 | 67.7 | 82 |
| A3 | 64.92 | 51 | 105.2 | 83.6 |
| A4 | 71.36 | 34 | 88.1 | 81.3 |
| A5 | 70.56 | 25 | 86.4 | 33.4 |
| A6 | 64.72 | 632 | 1264.1 | 1055.7 |
| A7 | 60.27 | 528 | 900.8 | 700.9 |
| A8 | 62.07 | 487 | 850.8 | 743.3 |
| A9 | 63.36 | 448 | 945.6 | 603.8 |
| A10 | 63.22 | 336 | 702.4 | 452.7 |
>TRINITY_DN120047_c0_g1_i1 from sample A1 / Example spliced isoformGGAGAATACGCGCCAAAGCCGTCTGTCAATCCCCTCTATTTATTTCCAAGTCTTGTAAATCTTCCTTCGAGCTGAAATATTTTCCGACGCTGCAATCCAACTTTCCATTCCTTCCCAGTATCTGCTCCTTAAACTGTTCAAATGGAGAAAGCCAGCTCCAATTCGAACCTGGAAGCTCCCAAAACCCAAGAGGTTTCAAG
TTGCGGCAATGCTGAAAACCCAGATACTGAAACCCAAGCAATAAATTTGAGCAAAACCCCTGCAGCCGAGCCTTCTGCTTCCAATGGTAGACAACCCCCTGCCGCCGAGCCTTCTGCTTCCAATGGCAGACGACCCCCTCCTTGCAGATATTTTCGGCAAGGTTATTGTAGAAATGGCAGTGCTTGCCGTTTCCAGCATG
TGGGATCCCAAACGTTGGACAGTTCTGCTGCCAATGGAGCCAGTTCTGATGATAGGGTTTGCAGATTTTATCAGCAGGGCCGTTGCAGATTCGGTGATTCCTGTCGCTTCCGCCACATACAACCGCCGGCTATTGAAGAAGATGACGACGACGAAGCTGAGTTGGATCCGCTGCAGCTGGCCATGCTTATCGCGCTCATA
GAAGGCTCTCAGGGGCTGGCTGAAGTGGCTCTGGACGAGGATTTGGAGCAGAGGTTTTGGAATTGTGGGTTTACTGAGGAAGAGGTCTTTGAGCTAGCTTGCCAGGGGGTGAAACCCTGGGACGAGGATGCCGAAGCAGTCCTGGACGTGTTGAATAATGGCTGGGATTATGATCCTTTTGATATGGACTACGGGGACTT
TGAGCTGGGCTCCCTTGATCTGGGCACTGATGATGATGATAATAATTGAGGGTTTATACGAGGCTTTAGAGATGAAAGAAGATTTAGGGGTTGAGAGCGCTTTCTGGGTTTTTGAGTTGCAGTATCTACCCACAAAGTTCTCTGAGCTCTTGCGAGTTTCTATGCAACATGTCGATTGGGATACTTTAGATTCCATGGAA
GCTCTATGGGTTCTTGCGAGTTTCTCTGCAATATTTTTTGTTAAAGTAGCATCCATAGCATTTGGTAGGTCGAATGTCTCAAATGACCAATTTGTGTGGTGGTTTAAAATATGGGTATCAAGCCACCTCTTTGAAAACCAAATCAAATCATTTTGCTTGTGTATTGTGAGCATGAAGGCATTTTTTTTGGGTGATCTTAC
AAAATCAGTTTGCTTATTAATTTTGAGGATGAAGCCATGCTTGTGGGTAGTTGTGGAAGCTATTATTAATGGGTTGTTAGTAGCTATTTAAATTTTTTCATAAGTTGGAAAGTCTTAGTGAGTAAGAACTGTAAGTGTTTGTGGGGAATTTATTTGACAAACGTTCACA
>TRINITY_DN120047_c0_g1_i2 from sample A1 / Example unspliced isoform:GGAGAATACGCGCCAAAGCCGTCTGTCAATCCCCTCTATTTATTTCCAAGTCTTGTAAATCTTCCTTCGAGCTGAAATATTTTCCGACGCTGCAATCCAACTTTCCATTCCTTCCCAGTATCTGCTCCTTAAACTGTTCAAATGGAGAAAGCCAGCTCCAATTCGAACCTGGAAGCTCCCAAAACCCAAGAGGTTTCAAG
TTGCGGCAATGCTGAAAACCCAGATACTGAAACCCAAGCAATAAATTTGAGCAAAACCCCTGCAGCCGAGCCTTCTGCTTCCAATGGTAGACAACCCCCTGCCGCCGAGCCTTCTGCTTCCAATGGCAGACGACCCCCTCCTTGCAGATATTTTCGGCAAGGTTATTGTAGAAATGGCAGTGCTTGCCGTTTCCAGCATG
TGGGATCCCAAACGTTGGACAGTTCTGCTGCCAATGGAGCCAGTTCTGATGATAGGGTTTGCAGATTTTATCAGCAGGGCCGTTGCAGATTCGGTGATTCCTGTCGCTTCCGCCACATACAACCGCCGGCTATTGAAGAAGATGACGACGACGAAGCTGAGTTGGATCCGCTGCAGCTGGCCATGCTTATCGCGCTCATA
GAAGGCTCTCAGGGGCTGGCTGAAGTGGCTCTGGACGAGGATTTGGAGCAGAGGTTTTGGAATTGTGGGTTTACTGAGGAAGAGGTCTTTGAGCTAGCTTGCCAGGGGGTGAAACCCTGGGACGAGGATGCCGAAGCAGTCCTGGACGTGTTGAATAATGGCTGGGATTATGATCCTTTTGATATGGACTACGGGGACTT
TGAGCTGGGCTCCCTTGATCTGGGCACTGATGATGATGATAATAATTGAGgtagggttttcttgacggtttacagttctgtcttagtggggccttcgactctgttttgaaatgaaaacttgggcacaccggcattaactagggtttcaatggtttctgaagggttcgaggggaattttggattgtaataggtttaatggc
gattatatcatttcagGGTTTATACGAGGCTTTAGAGATGAAAGAAGATTTAGGGGTTGAGAGCGCTTTCTGGGTTTTTGAGTTGCAGTATCTACCCACAAAGTTCTCTGAGCTCTTGCGAGTTTCTATGCAACATGTCGATTGGGATACTTTAGATTCCATGGAAGCTCTATGGGTTCTTGCGAGTTTCTCTGCAATAT
TTTTTGTTAAAGTAGCATCCATAGCATTTGGTAGGTCGAATGTCTCAAATGACCAATTTGTGTGGTGGTTTAAAATATGGGTATCAAGCCACCTCTTTGAAAACCAAATCAAATCATTTTGCTTGTGTATTGTGAGCATGAAGGCATTTTTTTTGGGTGATCTTACAAAATCAGTTTGCTTATTAATTTTGAGGATGAAG
CCATGCTTGTGGGTAGTTGTGGAAGCTATTATTAATGGGTTGTTAGTAGCTATTTAAATTTTTTCATAAGTTGGAAAGTCTTAGTGAGTAAGAACTGTAAGTGTTTGTGGGGAATTTATTTGACAAACGTTCACA
Intron 2 GTAGGGTTTT ... ATCATTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 74.03 | 29 | 80.5 | 86 |
| A2 | 69.84 | 28 | 79.5 | 50.5 |
| A3 | 74.09 | 30 | 95.5 | 77 |
| A4 | 71.02 | 36 | 108.5 | 69 |
| A5 | 80.92 | 14 | 66 | 53.5 |
| A6 | 74.31 | 400 | 1219 | 1105.5 |
| A7 | 75.56 | 179 | 623.5 | 493.5 |
| A8 | 74.36 | 203 | 616 | 569.5 |
| A9 | 76.9 | 163 | 586 | 509 |
| A10 | 77.82 | 105 | 429 | 317 |
>TRINITY_DN43142_c0_g2_i6 from sample A6 / Example spliced isoformTGTCAATCCCCTCTATTTATTTCCAAGTCTTGTAGATCATTCTTTGAGCTGAAATATTTTCTCACGCTGCAATCCAACTTTCCATTCCTTCCCAGTATCTGCTCTTTCAACTGCTCAAATGGAGAAATCCAACTCCAATTCGAACCAGGAAGCTCCCCAAATCCAACAGGTTTCAAGTTGTGGGGATGCTGAAAACCCAG
ATACTGAAACCCAAGGAATAAATTTGAGCAAGCCTCCTGCCGCCGAGCCTTCTGCTTCCAATGGCAGACAACACCGTCCTTGCAGACGTTTTCGGCAAGGTTATTGTAGAAAGGGCAGTGCTTGCCGATTTCAGCATGTGGGATCAGAAACGTTGGACAGTTCTGCTGCCAATGGAACCAGTTCCGATGACCGGGTTTGC
AGATTTTATCAGCAGGGCCGTTGCAGATTTGGTGATTCCTGTCGTTTCCGCCACATACAAACGCCGGCTATTAAAGAAGATGACGGAGGCGAAGGTGAGTTGGATCCGCTGCAGTTGGCCAAGCTTATCCGGCGCATGGAAGGCTTTCAGGGGCTGACTGAAAAACCTCCGCAGGAGGATTTGGGGCAGAGGTTTCGGAA
TCGCGGGTTTACTGACGAAGAGGTCTTAGAGCTCGCTTGCCATGGGGTGAAACCCTGGGACTATGAAGCCGAAGGAGTCCTGGACGTGTTGAATAATGGCTGGGATTATGATCCTTTTGATATGGACTATGAAGACTTTGATCTGGGCACTTCTAAAGATGACAATAATTGAGGTTTATACGAGGTTTAGAGATGAAAGA
AGATTTGGGGGTTTAGAGTGCTTTCTGGGTTTTTGAGGTGCAGTATTTACCCAGAAAGCTCTCTGAGCTCTTGCAATATGTTGATTGGGATGCTTTAGATTCCATGGAAGCTCTCTGAGCTCTTGCGAGTTTCTCAGCAATATTTTTTTAAGTGGCATCCATAGCATTTGATAGGTTGAATTTCTTAAATGACAAATTTG
TGGTTGTTTAAAATATGGGTATGAAGTCACCTCTTTGGAAAGCCAAATCAAATCATTTTGCTTGTGTAATTGTGTGCATGAAGCTATATCTTTGGGTGATCTTACAAAATCATTTTGTTTATTAATTTTTAGATTGAAGCCATGCCTATGGGGTGATCTTATAAATTGTTGCATTTGTGTAGATATAGTCAGGAATCATT
ATTGATAGGTTGCTATTTCAAATATTTGTATTAATGGAAAGGTTTTAGTGAG
>TRINITY_DN43142_c0_g2_i1 from sample A6 / Example unspliced isoform:TGTCAATCCCCTCTATTTATTTCCAAGTCTTGTAGATCATTCTTTGAGCTGAAATATTTTCTCACGCTGCAATCCAACTTTCCATTCCTTCCCAGTATCTGCTCTTTCAACTGCTCAAATGGAGAAATCCAACTCCAATTCGAACCAGGAAGCTCCCCAAATCCAACAGGTTTCAAGTTGTGGGGATGCTGAAAACCCAG
ATACTGAAACCCAAGGAATAAATTTGAGCAAGCCTCCTGCCGCCGAGCCTTCTGCTTCCAATGGCAGACAACACCGTCCTTGCAGACGTTTTCGGCAAGGTTATTGTAGAAAGGGCAGTGCTTGCCGATTTCAGCATGTGGGATCAGAAACGTTGGACAGTTCTGCTGCCAATGGAACCAGTTCCGATGACCGGGTTTGC
AGATTTTATCAGCAGGGCCGTTGCAGATTTGGTGATTCCTGTCGTTTCCGCCACATACAAACGCCGGCTATTAAAGAAGATGACGGAGGCGAAGGTGAGTTGGATCCGCTGCAGTTGGCCAAGCTTATCCGGCGCATGGAAGGCTTTCAGGGGCTGACTGAAAAACCTCCGCAGGAGGATTTGGGGCAGAGGTTTCGGAA
TCGCGGGTTTACTGACGAAGAGGTCTTAGAGCTCGCTTGCCATGGGGTGAAACCCTGGGACTATGAAGCCGAAGGAGTCCTGGACGTGTTGAATAATGGCTGGGATTATGATCCTTTTGATATGGACTATGAAGACTTTGATCTGGGCACTTCTAAAGATGACAATAATTGAGgtagggttttcttgatggtttacagtt
ctgttttagtggggccttggactctgttttgaaatgaaaccttggagaaaccggtactaactaggcttctagggtttctgaagggttcggggcgattttggattgtagtatgttttatggcgtttatatcatttcagGTTTATACGAGGTTTAGAGATGAAAGAAGATTTGGGGGTTTAGAGTGCTTTCTGGGTTTTTGA
GGTGCAGTATTTACCCAGAAAGCTCTCTGAGCTCTTGCAATATGTTGATTGGGATGCTTTAGATTCCATGGAAGCTCTCTGAGCTCTTGCGAGTTTCTCAGCAATATTTTTTTAAGTGGCATCCATAGCATTTGATAGGTTGAATTTCTTAAATGACAAATTTGTGGTTGTTTAAAATATGGGTATGAAGTCACCTCTTT
GGAAAGCCAAATCAAATCATTTTGCTTGTGTAATTGTGTGCATGAAGCTATATCTTTGGGTGATCTTACAAAATCATTTTGTTTATTAATTTTTAGATTGAAGCCATGCCTATGGGGTGATCTTATAAATTGTTGCATTTGTGTAGATATAGTCAGGAATCATTATTGATAGGTTGCTATTTCAAATATTTGTATTAATG
GAAAGGTTTTAGTGAG