sp|Q9MAP3|RK11_ARATH ----> Large ribosomal subunit protein uL11c
Intron 1 GTGAGTTGAA ... TGGCTCCAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 59.81 | 43 | 37 | 91 |
| A2 | 58.55 | 40 | 40 | 73 |
| A3 | 55.98 | 57 | 63 | 82 |
| A4 | 52.04 | 47 | 40 | 62 |
| A5 | 57.45 | 20 | 22 | 32 |
| A6 | 60.88 | 239 | 297 | 447 |
| A7 | 58.95 | 156 | 163 | 285 |
| A8 | 56.96 | 153 | 153 | 252 |
| A9 | 59.73 | 180 | 203 | 331 |
| A10 | 53.3 | 159 | 130 | 233 |
>TRINITY_DN110616_c0_g1_i2 from sample A1 / Example spliced isoformGCCAAGGATAGTCCAAGGAAGAAAAAAGGAGGGTAAAGAAAGGATAGCCTAAGAAGGAAAAAAAAAATAGGAAAGAATGGGAAATAACATTGAACTTCAACCGGAGTCTCTCCCATTTGATTCGAGTCAGCGGTTATCTTCACTTTCAACGGCACCCATGATGGTATTTGTGTGTTGCTAAAACCCCATACCCCATTCGA
TTAAGCTGGAACCCTAAGTCAGTCTCAACAGCAGCAATCAGTTATAGGATCAGAGTAATCAATCCCAGGAGACTGCAATCGCCGTTACAGGACGAGGATCCTTTGCTCCATCCACCAAGGGATCGAAGCTCCTGGGACGAGTAGCTTGGGTTATTCTCAGGTAGAGCTTATACAGGAATGTCCCGAGATTCGAACCTGGA
CTAGTTGTGATAAACTCCCACGGGTCAACTGCTAAATCACAGCCCAATCGACAGTTTATAATGGCTTCATTAGAAGCGATTTTGACGAGGCGGCCCGTGGCGGCGACCATCCGAATGGTGGTGCCGGCGGGACAAGCTAGACCGGCGCCCCCTGTTGGGCCTGCGCTGGGTCAGTACCGTCTCAACCTAATGACATTTTG
TAAAGAGTTCAATGCTCGCACTCAGAAATACAAGCCCGAGACGCCCATGTCCGTAATCCTCACTGCTTACAAAGACAGCACCTTTGAATTCATTGTCAAGACCCCCTCGGTCACATGGTATTTGAAGAAGGCCGCAGGAATTGAGTCAGGTAGCGGTAAGCCCGGTCATCAGGTTGTAGCCACACTAAGCCTCAAACATA
TCTATGAAATTGCCAAGGTCAAGCAATCCGATCCTTATTGTCAGTATATGCCGCTGGAATCAATCTGCAAGTCCATAATTAGTACAGCCAGGACTATGGGGATCGAGGTTAAGAAAGAGTTAGATTAATTTGTTACTTGATTCATTACCATTACAATTCCTTTTTTGGGTTTTTGCTAAGGGATAATGTGATTCTTGTGT
TACTGAAAAAGCTCAAAAACTGATACTGAAAGGGTTTTCTAGAATAGTCCAGATGTTATGACTGCCACTCTCATTGAATACACATTTGTTTTACTGATTAGTTGAAGCAACAGCTGTTATTGAGGACATTTGTTTTTTAATCAATAGTAGTGTAACTGTTATTGAGGACATTTTAATTCGCCTTTGTGATGCAATTCTTG
GTCAGTTACTTTGACTCAAATTTTGGTTGCATACAATTTTCAATGAGAA
>TRINITY_DN110616_c0_g1_i1 from sample A1 / Example unspliced isoform:GCCAAGGATAGTCCAAGGAAGAAAAAAGGAGGGTAAAGAAAGGATAGCCTAAGAAGGAAAAAAAAAATAGGAAAGAATGGGAAATAACATTGAACTTCAACCGGAGTCTCTCCCATTTGATTCGAGTCAGCGGTTATCTTCACTTTCAACGGCACCCATGATGGTATTTGTGTGTTGCTAAAACCCCATACCCCATTCGA
TTAAGCTGGAACCCTAAGTCAGTCTCAACAGCAGCAATCAGTTATAGGATCAGAGTAATCAATCCCAGGAGACTGCAATCGCCGTTACAGGACGAGGATCCTTTGCTCCATCCACCAAgtgagttgaagtatttttggttctctctgttatctatttttcctttttagcagaaacctcccaaagttttgttccgaggggg
atcgaagctattatttttaacagaaaccgcccaatttttggctccaagGGGATCGAAGCTCCTGGGACGAGTAGCTTGGGTTATTCTCAGGTAGAGCTTATACAGGAATGTCCCGAGATTCGAACCTGGACTAGTTGTGATAAACTCCCACGGGTCAACTGCTAAATCACAGCCCAATCGACAGTTTATAATGGCTTCAT
TAGAAGCGATTTTGACGAGGCGGCCCGTGGCGGCGACCATCCGAATGGTGGTGCCGGCGGGACAAGCTAGACCGGCGCCCCCTGTTGGGCCTGCGCTGGGTCAGTACCGTCTCAACCTAATGACATTTTGTAAAGAGTTCAATGCTCGCACTCAGAAATACAAGCCCGAGACGCCCATGTCCGTAATCCTCACTGCTTAC
AAAGACAGCACCTTTGAATTCATTGTCAAGACCCCCTCGGTCACATGGTATTTGAAGAAGGCCGCAGGAATTGAGTCAGGTAGCGGTAAGCCCGGTCATCAGGTTGTAGCCACACTAAGCCTCAAACATATCTATGAAATTGCCAAGGTCAAGCAATCCGATCCTTATTGTCAGTATATGCCGCTGGAATCAATCTGCAA
GTCCATAATTAGTACAGCCAGGACTATGGGGATCGAGGTTAAGAAAGAGTTAGATTAATTTGTTACTTGATTCATTACCATTACAATTCCTTTTTTGGGTTTTTGCTAAGGGATAATGTGATTCTTGTGTTACTGAAAAAGCTCAAAAACTGATACTGAAAGGGTTTTCTAGAATAGTCCAGATGTTATGACTGCCACTC
TCATTGAATACACATTTGTTTTACTGATTAGTTGAAGCAACAGCTGTTATTGAGGACATTTGTTTTTTAATCAATAGTAGTGTAACTGTTATTGAGGACATTTTAATTCGCCTTTGTGATGCAATTCTTGGTCAGTTACTTTGACTCAAATTTTGGTTGCATACAATTTTCAATGAGAA