NA ----> NA
Intron 1 GCGTCGTCGG ... GGAGTCCGAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 50 | 2 | 2 | 2 |
| A2 | 45.45 | 6 | 6 | 4 |
| A3 | 59.09 | 9 | 13 | 13 |
| A4 | 41.46 | 12 | 10 | 7 |
| A5 | 11.11 | 4 | 1 | 0 |
| A6 | 54.19 | 112 | 132 | 133 |
| A7 | 50.18 | 93 | 89.7 | 97.7 |
| A8 | 50.24 | 87.7 | 84 | 93 |
| A9 | 45.1 | 122.3 | 95 | 106 |
| A10 | 46.21 | 80.3 | 61 | 77 |
>TRINITY_DN38563_c0_g1_i2 from sample A6 / Example spliced isoformGGAAGATTCCCTTGTGCTTTCACCAATCCCGTGTAGAACCGACCTCAACATCTCCCGTGCTCAGCGAGTCAGCAGTACCGGTCGCTGGTTCGAAACCTGGTAAATGCGTGGAGATCATCTATTGATTTGACGTACCGTCAGAATTGTCGGTCCAATCACATTTACAGCCCAGTGACCTGTGATATTGTAGTGTTTGTAGC
ACTACTTTCTATTCTTGTGTTTGGAGCACTACTTCCATGACGCGGTATATTATTATTAAAGTCGGGGACCTCTTTCTTTGATGCTGATCTTGCGTAGTTCTTTAAAAGCCTTTGGTCTGGACATGGAAAAGACAGGCGAAGATCGCTTCAGGGATGGCGATAGTTTACGGGTCGTCGGCCGTTGGAAGGAGTCTGAGGGT
TGATGTTTGTGCTTGACAAATTTCTGAGAGTTGGAGATCAATTCTTCGAACGCCAGGGCATTGAGGTACTCAAAACATGGCGAGCTCTTATGCTTTGCATCATTTTTTGGCATATGGAGTCTGTAGAGCTCCGGCTCATAGATAAAAGCTTTATTATGTCAAGAATTGCCAGATTATGGTATATACCACACGGCAAAGTT
TGAGCTGCATTTAGCAAACAATCCTGTTAAAGTTCAGCGTTTAGCGACCTGTAAGCATTATGCTGACTTAATAGTCTGTAGAAAACGCTTTGGCTAGACTTCTTTACAAATGCATCTTGTAGCTTTTTAACCTTTTCCTTGCTGTTAACTCCTTTCATTGCTGACTTAATAGTCTCTAAAAAAACGCTTTGGCTAGACTT
CTTTACAAATGCAACTCGTAGCTTTTTAACCTTTTCCTTGCTGTTAACT
>TRINITY_DN38563_c0_g1_i3 from sample A6 / Example unspliced isoform:GGAAGATTCCCTTGTGCTTTCACCAATCCCGTGTAGAACCGACCTCAACATCTCCCGTGCTCAGCGAGTCAGCAGTACCGGTCGCTGGTTCGAAACCTGGTAAATGCGTGGAGATCATCTATTGATTTGACGTACCGTCAGAATTGTCGGTCCAATCACATTTACAGCCCAGTGACCTGTGATATTGTAGTGTTTGTAGC
ACTACTTTCTATTCTTGTGTTTGGAGCACTACTTCCATGACGCGGTATATTATTATTAAAGTCGGGGACCTCTTTCTTTGATGCTGATCTTGCGTAGTTCTTTAAAAGCCTTTGGTCTGGACATGGAAAAGACAGGCGAAGATCGCTTCAGGGATGGCGATAGTTTACGGGTCGTCGGCCGTTGGAAGGAGTCTGAGgcg
tcgtcggccgttggaaggagtccgagGGTTGATGTTTGTGCTTGACAAATTTCTGAGAGTTGGAGATCAATTCTTCGAACGCCAGGGCATTGAGGTACTCAAAACATGGCGAGCTCTTATGCTTTGCATCATTTTTTTGGCATATGGAGTCTGTAGAGCTCCGGCTCATAGATAAAAGCTTTATTATGTCAAGAATTGCC
AGATTATGGTATATACCACACGGCAAAGTTTGAGCTGCATTTAGCAAACAATCCTGTTAAAGTTCAGCGTTTAGCGACCTGTAAGCATTATGCTGACTTAATAGTCTGTAGAAAACAGCTTTTTAACCTTTTCCTTGCTGTTAACTCCTTTCATTGCTGACTTAATAGTCTCTAAAAAAACGCTTTGGCTAGACTTCTTT
ACAAATGCAACTCGTAGCTTTTTAACCTTTTCCTTGCTGTTAACT