sp|Q0D9C7|CCB22_ORYSJ ----> Cyclin-B2-2
Intron 1 GTGAGAACCT ... TGAGTTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 12.09 | 722.3 | 110.3 | 40.7 |
| A2 | 15.01 | 560.1 | 113.1 | 29.1 |
| A3 | 12.27 | 594.2 | 92.8 | 26.4 |
| A4 | 12.31 | 590.7 | 92.1 | 26.2 |
| A5 | 13.63 | 225.4 | 39.9 | 12.9 |
| A6 | 10.42 | 805.3 | 100.9 | 61.1 |
| A7 | 10.9 | 1706.8 | 227.8 | 101.8 |
| A8 | 11.48 | 1328.8 | 188 | 103.8 |
| A9 | 11.49 | 1574.6 | 223.9 | 107.2 |
| A10 | 13.14 | 1633.9 | 276.4 | 92.7 |
>TRINITY_DN42873_c0_g1_i5 from sample A7 / Example spliced isoformTCCGGATTGTCTAATACACCCATCGCGGCTCCCAATTTCTGACCGTTAGAGACCACGAGCAAACAATATATCCGTTACAAAGCAACGAACTCTTCTCAGGTCGAGGGAATTTAAATTAACATCTTGGCATCACCTCATCGATATGTTTTTCTGTGGGGATCGTCTCTTTTGGCATTGAGCGGATGTAAATGTTGTTCGGG
CTGCAGGGCTAAAGAAATGTTTATTTGATCGCCTTCGCTCTGCAGTCCCTCTGTTACTTTGAATCATAAGACGGTGCCAAATTTGATTAAACCCCTTGGAAATCCAGTTACTGGGCTTCTCCCCTCTGTTACTTTGAATCATAAGACGGTGCCAAATTTGATTAAACCCCTTGGAAATACACTGCACTTCCTTCGTATTT
GTTTGTAATTCACCCATTGCCCTGTAGAAACCAGACCCACCTATCTAATCTATTGGACTCTGGGAGAAAACCCATCAATCCCTGCTGCTCCACAACAATGTATTTCACCAGGCAAATGGCAGGATTTGTTGAAAACGCACCTGGATTGGCCAAGCCCACCAACAGTAAAGGTGCTCCTGAAATGGAAGGCAACAAAGCAG
CAGCACCATCAGGTCAAGCACATGGTCGTCGAGTGCTAGGGGACATTGGAAATGTTGTTTCTGCCATGCCCCAAAGGAATCCACATGCTGTTGGTTCTAAAATTTTTGTTTCAAACAATCGTCCGGTGACAAGGAAATATGTTGCAACATTGGCAAACAATCCGCATTTTGTACAGGATTCCCAACATTTGGATGGACCT
GATGAGAAGTTCTGCGTGGGAGAGAAGCACCAAAGGGCACTTTCATCTACAGGGAACAATAATGATCAAATGGCGCATGAAGTTGATATGGAAGATCAGATGACATCAGAGCTGACTGGACCTTCTGTGGTTCAGACTGAGTGGATCCAATATCAGGAATGCTGTGAAGTGGAAATGGAAGATTCAGTTGATCCAATGTC
AGACATCGACGAGGCTGATGCAGGAGACCCAATGGCGGTTTCCGAATACGTACAAGACATTTACAGTTTGTATAAGACCAGGGAGAATCTTAGTTGTGTTCCACAAGACTACATGTCCCAGCAATTAGACATAAATGAGAGAATGAGGGCTATCCTGATTGACTGGCTCATTGAGGTGCACATGAAGTTTGAGCTCATGG
ATGAAACTCTATTTTTGACTATCAACATCATTGATAGATACCTCTCCAGACACAGGGTGATGAGAAAACATTTGCAGCTTGTAGGGGTGACCGCCATGCTTTTGGCATGCAAGTATGAGGAGGTCTCTGTTCCTGTGGTTGATGACTTCGTTCTTATTTCTGACAATGCCTACACTAAAGAAGAAGTTTTACAAATGGAG
AAATTGATACTTAGTACTCTGCAATTCAATATGGCTGTGCCAACTCCTTATGTCTTCATGAAGAGATTTCTCAAAGTAGCTCAATCTGATGAAGAGACGGAGAGATTGTCTTTTTTCTTCATGGAGCTTTGCCTGGTGGAGTATGCTATGTTGAGATACCAACCCTCCATTCTTGCAGCTGCCGCAGTTTACACTGCCCA
ATGTACCCTCGGAAGAACTCCATGTTGGAATGGAAGTCTTGAATGGCATAGTAGCTACTCAGAAAGTCAACTTCGGGAATGTGCCAAGATGATGGTGCATTATCATGAAAAGGCAGGAGAAGGGAAGCTTACTTGTGTTTACAGGAAATACTCTGCCTCCAAATATGACCGTGTAGCCAAGATAGAACCAGCTCTCTTCA
TTAGAGACATGGTCCTCTAGGATACTGACAGATTAGCAATCATTCTACAGCATGGTTTACTAACCATGGAAGCGCATGTCATGACTTTTAATATGTTTTTATTTTATGTTTACATATTGTTGCTGGATTTCATATGCTGAATTACGCTTTGAAGTGATCATTACGCTTTGAAGTGATCACGATGAAGAGCATTAAATTTA
ACAACTGAGGCAGTAGCAATCTCTGCACCTCCTCATTGATTTTAACTAGCTGGGTGAGGGAGCAGTCTTAACTAATGATGGGTGATTTCTTCAATCTTCTCTTCCTTCCTGAGAAGAACACTGCTAGGCGGTGATCGGGATGTTTAAGTTGGTCCCTGATCTCTTTATCTAACAGAAAAAGAAGTGAGCAAGTAAGCTCC
TCCTCCTCCACTGGGGTAATAAGGAAATTCAATGCTTAATAAATCTGTCGGCTTAAAGATATATACAGAGATCCAGGAGGGATGATTTGTACAAGACCAACGCCTGGTTATGTTTGTGATATTAATCTCAGCTTCTGGATCTGTATTTTGCAATCAGATCAGGTTGAGGCTGTAGAAGCTGAGTTGGGTGAGGAGAATTA
GTTGTACATTCCAACAGCAACAGCGTTGTTAGTAGTTGTGTTTTTGACATAATAACAGTAATGATTCAGGATTGCTGTTTTCGTAATTGTTTTCTTTATCATTGAATGGTTTTTTCTTTCAGCGGGTTTTACAATGTTGTTTGCTAAAAAGAGCATATAACTAATTTATGTGGTGCTAGCAATAAGGAAATAGTGTAATT
CTTTTTCTTTCTCAGGAAATAGTGTAATTCTTTTTATTTCTCAGGAAAACCAAGATGCCTTGCATCTGCCTGTTTTTCTTCATTATGTTTATGG
>TRINITY_DN42873_c0_g1_i4 from sample A7 / Example unspliced isoform:TAAAGAAGAAGTTTTACAAATGgtgagaacctttcttccatcaatcgaaaatagaagttaagtctcattgcataaattagccataagccatgggcaagctcttatagaaatagagtcacagaattttatgcatcaacgaaatagcagggcagtcaataaattatgcagaaataactatttttcagtatatggctgcaagg
tccagtcataaacgatttagaaataactatttttcaataaatggctgcaagcctaattttgggtgtcaggtccttgtaaatcacatatatctttgtcgtgactaatctaagtctggggtcacattagtctgaactgaatccctctagttttattgatctttagtctgaactgaatccctctagttttattgatctttgaa
gaatagatgaagcaacctttgcggattttcattccactaattttcaagtctttctgagttgcagGAGAAATTGATACTTAGTACTCTGCAATTCAATATGGCTGTGCCAACTCCTTATGTCTTCATGAAGAGATTTCTCAAAGTAGCTCAATCTGATGAAGAGACGGAGAGATTGTCTTTTTTCTTCATGGAGCTTTGCC
TGGTGGAGTATGCTATGTTGAGATACCAACCCTCCATTCTTGCAGCTGCCGCAGTTTACACTGCCCAATGTACCCTCGGAAGAACTCCATGTTGGAATGGAAGTCTTGAATGGCATAGTAGCTACTCAGAAAGTCAACTTCGGGAATGTGCCAAGATGATGGTGCATTATCATGAAAAGGCAGGAGAAGGGAAGCTTACT
TGTGTTTACAGGAAATACTCTGCCTCCAAATATGACCGTGTAGCCAAGATAGAACCAGCTCTCTTCATTAGAGACATGGTCCTCTAGGATACTGACAGATTAGCAATCATTCTACAGCATGGTTTACTAACCATGGAAGCGCATGTCATGACTTTTAATATGTTTTTATTTTATGTTTACATATTGTTGCTGGATTTCAT
ATGCTGAATTACGCTTTGAAGTGATCATTACGCTTTGAAGTGATCACGATGAAGAGCATTAAATTTAACAACTGAGGCAGTAGCAATCTCTGCACCTCCTCATTGATTTTAACTAGCTGGGTGAGGGAGCAGTCTTAACTAATGATGGGTGATTTCTTCAATCTTCTCTTCCTTCCTGAGAAGAACACTGCTAGGCGGTG
ATCGGGATGTTTAAGTTGGTCCCTGATCTCTTTATCTAACAGAAAAAGAAGTGAGCAAGTAAGCTCCTCCTCCTCCACTGGGGTAATAAGGAAATTCAATGCTTAATAAATCTGTCGGCTTAAAGATATATACAGAGATCCAGGAGGGATGATTTGTACAAGACCAACGCCTGGTTATGTTTGTGATATTAATCTCAGCT
TCTGGATCTGTATTTTGCAATCAGATCAGGTTGAGGCTGTAGAAGCTGAGTTGGGTGAGGAGAATTAGTTGTACATTCCAACAGCAACAGCGTTGTTAGTAGTTGTGTTTTTGACATAATAACAGTAATGATTCAGGATTGCTGTTTTCGTAATTGTTTTCTTTATCATTGAATGGTTTTTTCTTTCAGCGGGTTTTACA
ATGTTGTTTGCTAAAAAGAGCATATAACTAATTTATGTGGTGCTAGCAATAAGGAAATAGTGTAATTCTTTTTCTTTCTCAGGAAATAGTGTAATTCTTTTTATTTCTCAGGAAAACCAAGATGCCTTGCATCTGCCTGTTTTTCTTCATTATGTTTATGG
Intron 2 GTGAAGACTT ... TTTGGTCCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 13.07 | 430 | 36.5 | 74.5 |
| A2 | 11.21 | 371 | 27.5 | 53 |
| A3 | 10.79 | 447 | 39 | 61.5 |
| A4 | 12.18 | 407 | 38.5 | 65.5 |
| A5 | 11.36 | 228 | 24.5 | 33.5 |
| A6 | 11.17 | 358 | 39.5 | 51.5 |
| A7 | 11.18 | 988 | 92 | 142 |
| A8 | 12.48 | 496 | 35 | 82.5 |
| A9 | 11.13 | 978 | 86 | 140 |
| A10 | 12.69 | 1005 | 88.5 | 170 |
>TRINITY_DN124363_c6_g2_i1 from sample A1 / Example spliced isoformCCGGATTGTCTAATACACCCATCGCGGCTCCCAATTTCTGACCGTTAGAGACCACGAGCAAACAATATATCCGTTACAAAGCAACGAACTCTTCTCAGGTCGAGGGAATTTAAATTAACATCTTGGCATCACCTCATCGATATGTTTTTCTGTGGGGATCGTCTCTTTTGGCATTGAGCGGATGTAAATGTTGTTCGGGC
TGCAGGGCTAAAGAAATGTTTATTTGATCGCCTTCGCTCTGCAGTCCCTCTGTTACTTTGAATCATAAGACGGTGCCAAATTTGATTAAACCCCTTGGAAATCCAGTTACTGGGCTTCTCCCCTCTGTTACTTTGAATCATAAGACGGTGCCAAATTTGATTAAACCCCTTGGAAATACACTGCACTTCCTTCGTATTTG
TTTGTAATTCACCCATTGCCCTGTAGAAACCAGACCCACCTATCTAATCTATTGGACTCTGGGAGAAAACCCATCAATCCCTGCTGCTCCACAACAATGTATTTCACCAGGCAAATGGCAGGATTTGTTGAAAACGCACCTGGATTGGCCAAGCCCACCAACAGTAAAGGTGCTCCTGAAATGGAAGGCAACAAAGCAGC
AGCACCATCAGGTCAAGCACATGGTCGTCGAGTGCTAGGGGACATTGGAAATGTTGTTTCTGCCATGCCCCAAAGGAATCCACATGCTGTTGGTTCTAAAATTTTTGTTTCAACCAATCGTCCGGTGACAAGGAAATATGTTGCAACATTGGCAAACAATCCGCATTTTGTACAGGATTCCCAACATTTGGATGGACCTG
ATGAGAAGTTCTGCGTGGGAGAGAAGCACCAAAGGGCACTTTCATCTACAGGGAACAATAATGATCAAATGGCGCATGAAGTTGATATGGAAGATCAGATGACATCAGAGCTGACTGGACCTTCTGTGGTTCAGACTGAGGAATGCTGTGAAGTGGAAATGGAAGATTCAGTTGATCCAATGTCAGACATCGACGAGGCT
GATGCAGGAGACCCAATGGCGGTTTCCGAATACGTACAAGACATTTACAGTTTGTATAAGACCAGGGAGAATCTTAGTTGTGTTCCACAAGACTACATGTCCCAGCAATTAGACATAAATGAGAGAATGAGGGCTATCCTGATTGACTGGCTCATTGAGGTGCACATGAAGTTTGAGCTCATGGATGAAACTCTATTTTT
GACTATCAACATCATTGATAGATACCTCTCCAGACACAGGGTGATGAGAAAACATTTGCAGCTTGTAGGGGTGACCGCCATGCTTTTGGCATGCAAGTATGAGGAGGTCTCTGTTCCTGTGGTTGATGACTTCGTTCTTATTTCTGACAATGCCTACACTAAAGAAGAAGTTTTACAAATGGTGAGAACCTTTCTTCCAT
CAATCGAAAATAGAAGTTAAGTCTCATTGCATAAATTAGCCATAAGCCATGGGCAAGCTCTTATAGAAATAGAGTCACAGAATTTTATGCATCAACGAAATAGCAGGGCAGTCAATAAATTATGCAGAAATAACTATTTTTCAGTATATGGCTGCAAGGTCCAGT
>TRINITY_DN124363_c6_g2_i4 from sample A1 / Example unspliced isoform:CCGGATTGTCTAATACACCCATCGCGGCTCCCAATTTCTGACCGTTAGAGACCACGAGCAAACAATATATCCGTTACAAAGCAACGAACTCTTCTCAGGTCGAGGGAATTTAAATTAACATCTTGGCATCACCTCATCGATATGTTTTTCTGTGGGGATCGTCTCTTTTGGCATTGAGCGGATGTAAATGTTGTTCGGGC
TGCAGGGCTAAAGAAATGTTTATTTGATCGCCTTCGCTCTGCAGTCCCTCTGTTACTTTGAATCATAAGACGGTGCCAAATTTGATTAAACCCCTTGGAAATCCAGTTACTGGGCTTCTCCCCTCTGTTACTTTGAATCATAAGACGGTGCCAAATTTGATTAAACCCCTTGGAAATACACTGCACTTCCTTCGTATTTG
TTTGTAATTCACCCATTGCCCTGTAGAAACCAGACCCACCTATCTAATCTATTGGACTCTGGGAGAAAACCCATCAATCCCTGCTGCTCCACAACAATGTATTTCACCAGGCAAATGGCAGGATTTGTTGAAAACGCACCTGGATTGGCCAAGCCCACCAACAGTAAAGGTGCTCCTGAAATGGAAGGCAACAAAGCAGC
AGCACCATCAGGTCAAGCACATGGTCGTCGAGTGCTAGGGGACATTGGAAATGTTGTTTCTGCCATGCCCCAAAGGAATCCACATGCTGTTGGTTCTAAAATTTTTGTTTCAAACAATCGTCCGGTGACAAGgtgaagacttttcttcaaacatcattctgattcttcctatctagattgaactgtggatctatctatga
gtacaggatttgattccatctctgtggtattttggtccagGAAATATGTTG