NA ----> NA
Intron 1 GCCTTGAGGG ... TCTCAAACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 75.12 | 25 | 75 | 76 |
| A2 | 71.93 | 24 | 62 | 61 |
| A3 | 70.75 | 31 | 78 | 72 |
| A4 | 75.44 | 14 | 41 | 45 |
| A5 | 68.57 | 11 | 23 | 25 |
| A6 | 67.88 | 88 | 160 | 212 |
| A7 | 69.19 | 118 | 254 | 276 |
| A8 | 68.71 | 97 | 206 | 220 |
| A9 | 66.07 | 105 | 197 | 212 |
| A10 | 68.94 | 98 | 222 | 213 |
>TRINITY_DN104924_c5_g3_i6 from sample A4 / Example spliced isoformGTTAAAACCCACGGGGCCGCGTTCGCGGCGTTTTCGCTGCAGTCTGAGCATGTAACAGAAGCCTCCTAAAGTCAGAGGTAGTGAAGGACCGATTCTAAATTTTGGTATGTTAGATTCCGCAGGCTGAGATTACCTGCCACCTGAAATAGTCCAAATCATCATCTCATCCGGCATCTGTATGAGATTAGGGATGGCAATTA
GTGAGGCGGAGGTCGAGGCAGAGGCAGAGGAGGGAAACGCATCCCATTCCAATTGCCACGGCGACAGGAGGATAAAGAAGAGAAGAAGGGACGAAGACGAAAAGGAGGATGAGGAGGAGAGAACCAGGAACGAAGAAGAAGAGTTGGAGGCGGCGTCTTTAGAGGACTCTATTACTTTCACAGATACGTTAATTGCTTTG
AAGATTATCCGTGCCCAGTTTCCTAAGATTGAAAGGGTGGCAGTACAACCATTTGTTCTCCGTTCACAATTATACAGCAGCGTCAAAGACAGAACACAAGTTGACAGGGAATTGGAGGTTGAAGCTGCCAGGATACGGATAGAAGCAAAGCATCCAGATGATGTTGTCATTTTTGGTTGGTTCAGATCTTTTGTTCTTCC
TTCCAAGAATCAAGTCAGTATTAGCCATTTGGAGCTGTGTGAGCTATTATCAAGTGGAGGAGAAGTGAAGGATAAACATATTTCACTTCTCATAAATGCGGGGCTCTTGGCCTTGAGGGAAGAGGAGGTTCTACGCATATTCAAATTGAATACGGGTCAAGATGATCATGCCATCATGTTCACTGATGATTATCTCAAAC
AGGTTGAAGCTGCCAGGATACGG
>TRINITY_DN104924_c5_g3_i7 from sample A4 / Example unspliced isoform:GTTAAAACCCACGGGGCCGCGTTCGCGGCGTTTTCGCTGCAGTCTGAGCATGTAACAGAAGCCTCCTAAAGTCAGAGGTAGTGAAGGACCGATTCTAAATTTTGGTATGTTAGATTCCGCAGGCTGAGATTACCTGCCACCTGAAATAGTCCAAATCATCATCTCATCCGGCATCTGTATGAGATTAGGGATGGCAATTA
GTGAGGCGGAGGTCGAGGCAGAGGCAGAGGAGGGAAACGCATCCCATTCCAATTGCCACGGCGACAGGAGGATAAAGAAGAGAAGAAGGGACGAAGACGAAAAGGAGGATGAGGAGGAGAGAACCAGGAACGAAGAAGAAGAGTTGGAGGCGGCGTCTTTAGAGGACTCTATTACTTTCACAGATACGTTAATTGCTTTG
AAGATTATCCGTGCCCAGTTTCCTAAGATTGAAAGGGTGGCAGTACAACCATTTGTTCTCCGTTCACAATTATACAGCAGCGTCAAAGACAGAACACAAGTTGACAGGGAATTGGAGgccttgagggaagaggaggttctacgcatattcaaattgaatacgggtcaagatgatcatgccatcatgttcactgatgatta
tctcaaacagGTTGAAGCTGCCAGGATACGGATAGAAGCAAAGCATCCAGATGATGTTGTCATTTTTGGTTGGTTCAGATCTTTTGTTCTTCCTTCCAAGAATCAAGTCAGTATTAGCCATTTGGAGCTGTGTGAGCTATTATCAAGTGGAGGAGAAGTGAAGGATAAACATATTTCACTTCTCATAAATGCGGGGCTCT
TGACTCGGCAGCTGGCTGATTCAAACTCATATTGGTTTTCGATCCCAAACGTTGGAATGCTGCTCAAGAGCCTCAGTCAGGGTCGAAAGGAGCTCTTGTCTTTTTTAAATCGAAGGAAATACAAAGAAATGTTGTTGTCACCTTTAGAGAAAAGACGCCTGCGATTTTCACAACTAGACATGAGATTTCATCTGCGAGAT
TTGATAGGTTCTGGCCACCTCAAAATTGTTCCAACCCCTGCGGGGTCACTAGTTCGAGTTGCAAAGGAATGAGGCCCATATAGGTGTGGCATCGATGTAGTTTATTTTCAGGTCCATTGCCACGTTTTCAGGACCACAGAAATCTTTGATGTTTTATTTCATTGTTACTTCATTCTTTATTTTTTAATAATAGATTACAA
GTTGTTAGGTTGCCTACGTTAATGTCCAAAATTGCTTGCAAGAAGTCCAATGTGGGAAGGTAATTTCCATCTTCAATGATTTGGTTTGTAAGTAATAGGTTTAACAGGTAGCCTGGTGCATGCGTTATGTTTATATTGATTATTTTAATAGCTACAAGTCCACGAAGGTGGATCAGTCCAATGTTCATTCATATTGATTC
AGTAGTGGCAACCAGATTCGTTAGCAAGCCCAAGTTGCCAATGTATTAAAATCTTTAATTTCAGTTTTTTGATGCTGGATAATCTTTTACTCTGTGTTCTACATCGGCAACCATTACTTGCTAGATCACTAATATGGCATGTTCTCAATAGTGTAGTTG