sp|Q9ZUX7|IPT2_ARATH ----> tRNA dimethylallyltransferase 2
Intron 1 GTATGTTTCC ... TTGCTTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 26.67 | 33 | 3 | 12 |
| A2 | 18.75 | 26 | 2 | 6 |
| A3 | 38.89 | 22 | 2 | 14 |
| A4 | 15.79 | 16 | 1 | 3 |
| A5 | 33.33 | 2 | 1 | 1 |
| A6 | 31.03 | 20 | 3 | 9 |
| A7 | 23.91 | 70 | 5 | 22 |
| A8 | 29.01 | 93 | 9 | 38 |
| A9 | 22.22 | 63 | 7 | 18 |
| A10 | 27.17 | 67 | 0 | 25 |
>TRINITY_DN116994_c0_g2_i3 from sample A1 / Example spliced isoformCAAAAATCAAGAGAAGCGGAGAGATACAAAATCTTGGACAGATGGTGTATGTAGCTCCACAAGCACAAAACTTAAAACGTATTCGTGGATGAAACGGAAAACCTCTGCTGCGACGGAAAACCTCTGCTGCGATGCGATGAATTAAATGTAAGCGCAGGAAAGGGACAGCGGTGGGGAAGTAAGATTTTTAGATTCTCTTA
CCAAGAACGCTAAAACGCAAGTTACTGATTTTTGCGCTGAGGGGAGCGAGAATGGAGGCGATAGAAGTGGCAGCCAGAAGGAAAGAATAGAATAGAAGACCGAGAGCATGGGGAGGGACATGGACAGGGACAGTAAAATGGTATACTTATGGTCTTGTCCCTGTCTTTGTCCCTCCGCATCATTGGATGCATGCTCCCCG
TTCGATTCGGCCCCTCCTTATCTCTCTTGATTCTCCCTGATCCCTTCAAATTCTTTCCGCAATTGAATTAAAATATTTTGAAGAAGATATGTTCAAAAAAAAGTATTTAAAAAGGGGATGTGAATTGGGCTTTTCCGTAAGCATACCAGTTAGCACAGCTATTATCAATAACAATGGAGGACCATTTACCTAAATCTCCC
AACGTCAAGCACAAGCAAAAGGTGGTGGTTATAATGGGAGCCACGGGTTCTGGAAAATCGCGTCTTGCCATTGATTTAGCTCAGCGCTTCCCTGCTGAGATCCTAAATGCCGACTCCATGCAGGTCTACGAAGGTTTGGATATCGTAACCAACAAAGTGCCAATCGACGAAAGAAAGGGAATACTTCATCATCTTCTTGG
TACAATCAATGCCAATGTCAACTTCACATCAGAAGATTTCCGTGCTATGGCTATTCCTATTATTGATTCAATCATCTCTCGGAAACACTTGCCTATCATTGTTGGTGGTTCAAACTCCTTCATACAGGCTCTTGTTTGTTCATGCATGGTAGATGATGCGACGAAGATTGGAAATGGTGACCTCAAAAAAAGCGAGAGAC
CTTCTAGTGTTTGTAGCGATGCAGGAAGTTCAAATGACCTACATAAAAGATGCGATGTTGATGTTCGAAATACAAGTAATCAATTTGATCAAGTTGAAGAGATTGATCCAGTTGCAACTAATGGCCTTTGTCCCAATAATTTTAGCAAGGGAAGTGCCAATGACATACATAAAAGATGCAATGATGATGTTCGGAATACA
AGTAATCAATTTGATCAAGTTGTAGAGAGTGATCCGATTGCAACTAGTGGGCTTCATGCTAATGATTTTAATAAGGAAAGCGCCAATGATCTACATAAAAGATGCAATGACGATGTTCGAAATACAAGTAATCTATTTGATCAAGTTGAAAAGATTGATCCAATTGCATCTAATAGGCTTCATCCTAATGGTTTTATCAA
GGGGCAGAAACGGGATACAGCAGATTCTTTCAGATATGATTGCTGCTTTTTGTGGTTAGATGCCTCGTTGCCTGTACTTGACAAATTTGTTGAGGATAGAGTAGATTTTATGATTGAAGCTGGTTTACTGGAAGAAGTATCTGCATTTTATGATCCTGAGGCAGATTATACACATGGCTTATGGCAAGCAATTGGGTTGT
GCGAATTCAAGGATTTTTTCAATGCTTTTCCCCCAGAAGCTAATGGCCAAGAAATAGAAAAATTAGATAAGGGGAGTCACAATATCCTGTTAGATGATGCCATTGGAAGGATGAAAGAAAATACTTGTCGACTTGTACGCAAACAAAAACAACGAATCGATCAATTGAAAGCAATCAATGGTTGGAACTTGCATCGACTC
GATTCAACAAAAGCTCTAGAAAAATCTGGCTCTGAATCACTTGAACTATGGGAAGGGACAGTAGTCAATATTAGTATAGACATGGTGAAAAGGTTTTTGTCTGAGCATGCATGTGAAGCAAGCTTAAAAGAAGATGTGGAAACCGGAGTTGACTCTACACATCCAGAGCAAGCACAAGAGTTATGGACACAATATGCCTG
TGAGGCTTGCAGAGATCAAGTGTTTCAAGGAGCACATGAAAGGAAGCAACATAAACTTGGTCGTTCACATCAGAGGCAAATTCTGTGACTTGAAAAATAACTTGCAAGATTAATTACTTGAGAAACAAGTCATGGAGGTATGAATTTGGGTTTCTTAACATCTAAACAAACTTTGATGAGCTTGTTTGTTAAGCAGCAAT
GGATGATTACAAGCTTGGTTATGGAAGGAAAATAAAATTCTAGAGAAATTTTCTTCTCTGCGGTTGCTCATTTCTGAGCATTTTGAACAACTCCAAATTCATTGGATTGTGAGATGAAAACATACAGCAAATGGTAGGATGGTTCGTGTATCTTATCATCATAGAATGAAATAATGTGATCTTCATGTTTCCAAAATTTA
TATTAAGGCCATGATCTGCATTTTGACTGTATTGACAGGCTG
>TRINITY_DN116994_c0_g2_i7 from sample A1 / Example unspliced isoform:GCGGAAGTACCAGGTGCATTTGAGGGATGGATTTTTGACCTCTACTGCATTACATACTCTCTTTATATGAACCAACTGGCGATCAACTGGCGATCAGTCAACAGGGCCACTCATTCTTCATTCATTCGACGCAGTTCTCTTACTGCTGCAAGGGCAGAAACGGGATACAACAAATTCTTTCAGATATGATTGCTGCTTTT
TGTGGTTAGATGCCTCGTTGCCTGTACTTGACAAATTTGTTGAGGATAGAGTAGATTTTATGATTGAAGCTGGTTTACTGGAAGAAGTATCTGCATTTTATGATCCTGAGGCAGATTATACACATGGCTTATGGCAAGCAATTGGGTTGTGCGAATTCAAGGATTTTTTCAATGCTTTTCCCCCAGGTAGTAAGTTGCTT
CTCTTTTCTGGTAGAGAGGTCACGAGTTGTGGACCAAGTGCAGGTAGTTTGGATGACTAATTTGATACAAATACTGTTTGCTTCAGAAGCTAATGGCCAAGAAATAGAAAAATTAGATAAGGGGAGTCACAATATCCTGTTAGATGATGCCATTGGAAGGATGAAAGAAAATACTTGTCGACTTGTACGCAAACAAgtat
gtttccaccaatatctctctttgttgatgttacgtggtggattgaatgttaacaatgtaatttgatggtattactatttacagttaaattgctttgcttttagtatgaatatgtttgttttgacaagggacactgttatctctcaagagtttggccatttacctttgcttgcagAAACAACGAATCGATCAATTGAAAGC
AATCAATGGTTGGAACTTGCATCGACTCGATTCAACAAAAGCTCTAGAAAAATCTGGCTCTGAATCACTTGAACTATGGGAAGGGACAGTAGTCAATATTAGTATAGACATGGTGAAAAGGTTTTTGTCTGAGCATGCATGTGAAGCAAGCTTAAAAGAAGATGTGGAAACCGGAGTTGACTCTACACATCCAGAGCAAG
CACAAGAGTTATGGACACAATATGCCTGTGAGGTTAGCTGAAATTTACTTATGCATTGTTTGTTTGCTAAGGTTGTTAGAAT
Intron 2 GTAGTAAGTT ... TTTGCTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 31.22 | 32 | 15.2 | 14.1 |
| A2 | 28.52 | 29 | 13 | 10.4 |
| A3 | 31.16 | 21 | 11.9 | 7.3 |
| A4 | 65.07 | 5 | 6 | 12.6 |
| A5 | 42.86 | 12 | 10 | 8 |
| A6 | 20.11 | 22 | 8 | 3.1 |
| A7 | 22.93 | 85 | 35.5 | 15.3 |
| A8 | 24.21 | 73 | 27.8 | 19.3 |
| A9 | 28.7 | 55 | 25.9 | 18.5 |
| A10 | 21 | 72 | 30 | 8.5 |
>TRINITY_DN116994_c0_g2_i3 from sample A1 / Example spliced isoformCAAAAATCAAGAGAAGCGGAGAGATACAAAATCTTGGACAGATGGTGTATGTAGCTCCACAAGCACAAAACTTAAAACGTATTCGTGGATGAAACGGAAAACCTCTGCTGCGACGGAAAACCTCTGCTGCGATGCGATGAATTAAATGTAAGCGCAGGAAAGGGACAGCGGTGGGGAAGTAAGATTTTTAGATTCTCTTA
CCAAGAACGCTAAAACGCAAGTTACTGATTTTTGCGCTGAGGGGAGCGAGAATGGAGGCGATAGAAGTGGCAGCCAGAAGGAAAGAATAGAATAGAAGACCGAGAGCATGGGGAGGGACATGGACAGGGACAGTAAAATGGTATACTTATGGTCTTGTCCCTGTCTTTGTCCCTCCGCATCATTGGATGCATGCTCCCCG
TTCGATTCGGCCCCTCCTTATCTCTCTTGATTCTCCCTGATCCCTTCAAATTCTTTCCGCAATTGAATTAAAATATTTTGAAGAAGATATGTTCAAAAAAAAGTATTTAAAAAGGGGATGTGAATTGGGCTTTTCCGTAAGCATACCAGTTAGCACAGCTATTATCAATAACAATGGAGGACCATTTACCTAAATCTCCC
AACGTCAAGCACAAGCAAAAGGTGGTGGTTATAATGGGAGCCACGGGTTCTGGAAAATCGCGTCTTGCCATTGATTTAGCTCAGCGCTTCCCTGCTGAGATCCTAAATGCCGACTCCATGCAGGTCTACGAAGGTTTGGATATCGTAACCAACAAAGTGCCAATCGACGAAAGAAAGGGAATACTTCATCATCTTCTTGG
TACAATCAATGCCAATGTCAACTTCACATCAGAAGATTTCCGTGCTATGGCTATTCCTATTATTGATTCAATCATCTCTCGGAAACACTTGCCTATCATTGTTGGTGGTTCAAACTCCTTCATACAGGCTCTTGTTTGTTCATGCATGGTAGATGATGCGACGAAGATTGGAAATGGTGACCTCAAAAAAAGCGAGAGAC
CTTCTAGTGTTTGTAGCGATGCAGGAAGTTCAAATGACCTACATAAAAGATGCGATGTTGATGTTCGAAATACAAGTAATCAATTTGATCAAGTTGAAGAGATTGATCCAGTTGCAACTAATGGCCTTTGTCCCAATAATTTTAGCAAGGGAAGTGCCAATGACATACATAAAAGATGCAATGATGATGTTCGGAATACA
AGTAATCAATTTGATCAAGTTGTAGAGAGTGATCCGATTGCAACTAGTGGGCTTCATGCTAATGATTTTAATAAGGAAAGCGCCAATGATCTACATAAAAGATGCAATGACGATGTTCGAAATACAAGTAATCTATTTGATCAAGTTGAAAAGATTGATCCAATTGCATCTAATAGGCTTCATCCTAATGGTTTTATCAA
GGGGCAGAAACGGGATACAGCAGATTCTTTCAGATATGATTGCTGCTTTTTGTGGTTAGATGCCTCGTTGCCTGTACTTGACAAATTTGTTGAGGATAGAGTAGATTTTATGATTGAAGCTGGTTTACTGGAAGAAGTATCTGCATTTTATGATCCTGAGGCAGATTATACACATGGCTTATGGCAAGCAATTGGGTTGT
GCGAATTCAAGGATTTTTTCAATGCTTTTCCCCCAGAAGCTAATGGCCAAGAAATAGAAAAATTAGATAAGGGGAGTCACAATATCCTGTTAGATGATGCCATTGGAAGGATGAAAGAAAATACTTGTCGACTTGTACGCAAACAAAAACAACGAATCGATCAATTGAAAGCAATCAATGGTTGGAACTTGCATCGACTC
GATTCAACAAAAGCTCTAGAAAAATCTGGCTCTGAATCACTTGAACTATGGGAAGGGACAGTAGTCAATATTAGTATAGACATGGTGAAAAGGTTTTTGTCTGAGCATGCATGTGAAGCAAGCTTAAAAGAAGATGTGGAAACCGGAGTTGACTCTACACATCCAGAGCAAGCACAAGAGTTATGGACACAATATGCCTG
TGAGGCTTGCAGAGATCAAGTGTTTCAAGGAGCACATGAAAGGAAGCAACATAAACTTGGTCGTTCACATCAGAGGCAAATTCTGTGACTTGAAAAATAACTTGCAAGATTAATTACTTGAGAAACAAGTCATGGAGGTATGAATTTGGGTTTCTTAACATCTAAACAAACTTTGATGAGCTTGTTTGTTAAGCAGCAAT
GGATGATTACAAGCTTGGTTATGGAAGGAAAATAAAATTCTAGAGAAATTTTCTTCTCTGCGGTTGCTCATTTCTGAGCATTTTGAACAACTCCAAATTCATTGGATTGTGAGATGAAAACATACAGCAAATGGTAGGATGGTTCGTGTATCTTATCATCATAGAATGAAATAATGTGATCTTCATGTTTCCAAAATTTA
TATTAAGGCCATGATCTGCATTTTGACTGTATTGACAGGCTG
>TRINITY_DN116994_c0_g2_i7 from sample A1 / Example unspliced isoform:GCGGAAGTACCAGGTGCATTTGAGGGATGGATTTTTGACCTCTACTGCATTACATACTCTCTTTATATGAACCAACTGGCGATCAACTGGCGATCAGTCAACAGGGCCACTCATTCTTCATTCATTCGACGCAGTTCTCTTACTGCTGCAAGGGCAGAAACGGGATACAACAAATTCTTTCAGATATGATTGCTGCTTTT
TGTGGTTAGATGCCTCGTTGCCTGTACTTGACAAATTTGTTGAGGATAGAGTAGATTTTATGATTGAAGCTGGTTTACTGGAAGAAGTATCTGCATTTTATGATCCTGAGGCAGATTATACACATGGCTTATGGCAAGCAATTGGGTTGTGCGAATTCAAGGATTTTTTCAATGCTTTTCCCCCAGgtagtaagttgctt
ctcttttctggtagagaggtcacgagttgtggaccaagtgcaggtagtttggatgactaatttgatacaaatactgtttgcttcagAAGCTAATGGCCAAGAAATAGAAAAATTAGATAAGGGGAGTCACAATATCCTGTTAGATGATGCCATTGGAAGGATGAAAGAAAATACTTGTCGACTTGTACGCAAACAAGTAT
GTTTCCACCAATATCTCTCTTTGTTGATGTTACGTGGTGGATTGAATGTTAACAATGTAATTTGATGGTATTACTATTTACAGTTAAATTGCTTTGCTTTTAGTATGAATATGTTTGTTTTGACAAGGGACACTGTTATCTCTCAAGAGTTTGGCCATTTACCTTTGCTTGCAGAAACAACGAATCGATCAATTGAAAGC
AATCAATGGTTGGAACTTGCATCGACTCGATTCAACAAAAGCTCTAGAAAAATCTGGCTCTGAATCACTTGAACTATGGGAAGGGACAGTAGTCAATATTAGTATAGACATGGTGAAAAGGTTTTTGTCTGAGCATGCATGTGAAGCAAGCTTAAAAGAAGATGTGGAAACCGGAGTTGACTCTACACATCCAGAGCAAG
CACAAGAGTTATGGACACAATATGCCTGTGAGGTTAGCTGAAATTTACTTATGCATTGTTTGTTTGCTAAGGTTGTTAGAAT