sp|Q9S7Y1|BH030_ARATH ----> Transcription factor bHLH30
Intron 1 GTTTGAGACT ... TGTGTTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 81.82 | 2 | 2 | 9 |
| A2 | 88.24 | 2 | 0 | 15 |
| A3 | 88.89 | 1 | 4 | 8 |
| A4 | 58.33 | 5 | 1 | 7 |
| A5 | 61.54 | 5 | 7 | 8 |
| A6 | 86.21 | 4 | 2 | 25 |
| A7 | 100 | 0 | 5 | 30 |
| A8 | 75 | 7 | 3 | 21 |
| A9 | 79.41 | 7 | 5 | 27 |
| A10 | 84.62 | 8 | 4 | 44 |
>TRINITY_DN43773_c0_g1_i4 from sample A10 / Example spliced isoformCGGTGAAAGATGCAAAAAGAAAAAGTGAAAATCGACAAATGAAATGGAAGTAAACCCAGGCATACGGTAAACGGAAGAATGTAGTATGTATGTGGTGGTATCGATCGGAAGGAATCTGCAGCGTCTGCAGAGGTTTGCCCATGGTGGGATGAAACCCTAGAATATTTTCCTTCTCTTTTTAAAGAGAACAGTCGGAAGGA
GCCTCGAGAATATCGATCCGGCAGGTGGGCAGGGTTTCAGTACCCAGGAATGTTTTGAAAATCTGTGCCCTACAAGTACCAGAAACACCAAACAGCAAGGAAAGGAAACCCAGGTTTTTCTTAATAAATTTTCTTTTCGTTTCTTTTTGTAAATTTTTTGTCGACTTCAGAAAGGCTCGAGATCCGCGTTCAATACAGTA
CCCGAGAAATAGCGAAAGAAGAAGCATATTTGCAGGTAGCGATTTGAAAACTCTTGTCGAGGTGAGAAATGGTGTAGGAAACGGTACTGGCGATTAAGAAAGGAGGTGCATGAGAAAAGGAAGGAAAATAAAGAGGAATGGAACGCTGTTTCGCTGCTGGCACAGACGAGTCAGGAGTTCAAGTTGCAGTAAGAAGAAAC
GCTGCAAAATCTGCAACGTTAGCCAATCTGTTTGCTTTGTATTATCTGTTTCAGACGAAGATAGGTGGTCTGGGCTGGTTATTCGTTCCAAAGGCGGGTGATCCTGTGGGGAAGAGAGGGGCTTAACATTTTGCGTGAGACGAGAAAAGAGATGCAGCAGGACGATCAAGCGGGTAGCTCAATGAACGCCAGGCGGGCGG
ATCAAGACTTTAAAATGCTGTTTCCGACCTGGCCGACGATAGCAGTTCCTTCTCACAACGTAGGACAGGGACATCTGGAACCGTTCCAGACGCAAGTGATCCCCGGCCGTGACCAGATTCTGGCGGCGATGGCTTCGGAAGCCGGCTCTTCGTCATCTAATTCGCTCTCGGGGTTCCAAGACCTCATGAATAGCGGGGCG
CCGCTGCAATTTTCCTACGATTATCGTGGAGGCCACATGTTGCAGATCCCCGCTGGTTTGGCAAGCTTCAGTTCCGTGGACCATAAATCTGTCCACGATCGGCTTCTTCCACCGGTCTTGATGACTAGATCGGCATTGGAAATGAGCAAAATGACGGCGCAGGATATCGTGGAAGCCAAAGCCCTTGCGGCATCCAAGAG
CCACAGCGAAGCCGAGCGGAGGCGCCGCGAACGGATTAACAACCATCTTGCCACCCTTCGCAGCCTGCTTCCCAACACAACCAAAACGGATAAAGCTTCTCTGCTGGCGGAGGTCATCGATCATGTTAGAGAGCTGAAACGCATGGTGGACGACATAGGGCAAACCAGCCCGGTACCCAGCGAAGCCGACGAAGTAAGCC
TGGAATATCCTGATCCGAGTGAAGAAGGAAGGCAGGTCATACGCGCTTCCCTGTGCTGCGAAGACCGCCCCGAGCTCCTGTCGGATCTCATAAAAACCCTAAGATCACTCCGGCTCCGCGCAGTCAAGGCGGAGATCGCAACCCTCGGTGGGAGGGTGAAGAACGTGTTAGTCGTGACCAGCAGTGGCTCCCAGGACCCC
AGCGACGTGAGCGAAACCCCCTCCGCTTCCAGCATTCAGGAGGCGCTAAAGGCTGTCATGGAAAGGCAGAATTCCGACGATCTATCGCCTGCAACATCTTCCGGCGGGAATAAAAGACAACGTCAGGTAGGTTGATTCTGCGTATCTCTGCAAATTTTTGATGATAAACGATTCCGATATCATTTGAATAATCAGAAGTC
CATGCAGGCCTCGTGCACTGTAATATTCTCTCTCTCTCTGTCTATGTACTGCTAATATGGTGGACTCTCATCAATCTATCTCTCTGTATATGTTCATGCTGCCAAAATTTCCTAAATTATCTGCAACTTCATACGCTGAATATTTCTTAC
>TRINITY_DN43773_c0_g1_i3 from sample A10 / Example unspliced isoform:CGGTGAAAGATGCAAAAAGAAAAAGTGAAAATCGACAAATGAAATGGAAGTAAACCCAGGCATACGGTAAACGGAAGAATGTAGTATGTATGTGGTGGTATCGATCGGAAGGAATCTGCAGCGTCTGCAGAGGTTTGCCCATGGTGGGATGAAACCCTAGAATATTTTCCTTCTCTTTTTAAAGAGAACAGTCGGAAGGA
GCCTCGAGAATATCGATCCGGCAGGTGGGCAGGGTTTCAGTACCCAGGAATGTTTTGAAAATCTGTGCCCTACAAGTACCAGAAACACCAAACAGCAAGGAAAGGAAACCCAGGTTTTTCTTAATAAATTTTCTTTTCGTTTCTTTTTGTAAATTTTTTGTCGACTTCAGAAAGGCTCGAGATCCGCGTTCAATACAGTA
CCCGAGAAATAGCGAAAGAAGAAGCATATTTGCAGGTAGCGATTTGAAAACTCTTGTCGAGGgtttgagactaaaaccgagcttcttttgaattgtcttccttttgtactggcttctgaatctgtgttttgtttgacgaaagcttttagcagattaaagatccggtgggtaaagataagtttgttcttggattttgatgt
atgtggaaatatcgcagagggaaagattcgagtcggcttttgttttcttttccagaaggagagtttaaacgcgcataagtttgatgtttttatgcattccttttactgtgttgcagTGAGAAATGGTGTAGGAAACGGTACTGGCGATTAAGAAAGGAGGTGCATGAGAAAAGGAAGGAAAATAAAGAGGAATGGAACGC
TGTTTCGCTGCTGGCACAGACGAGTCAGGAGTTCAAGTTGCAGTAAGAAGAAACGCTGCAAAATCTGCAACGTTAGCCAATCTGTTTGCTTTGTATTATCTGTTTCAGACGAAGATAGGTGGTCTGGGCTGGTTATTCGTTCCAAAGGCGGGTGATCCTGTGGGGAAGAGAGGGGCTTAACATTTTGCGTGAGACGAGAA
AAGAGATGCAGCAGGACGATCAAGCGGGTAGCTCAATGAACGCCAGGCGGGCGGATCAAGACTTTAAAATGCTGTTTCCGACCTGGCCGACGATAGCAGTTCCTTCTCACAACGTAGGACAGGGACATCTGGAACCGTTCCAGACGCAAGTGATCCCCGGCCGTGACCAGATTCTGGCGGCGATGGCTTCGGAAGCCGGC
TCTTCGTCATCTAATTCGCTCTCGGGGTTCCAAGACCTCATGAATAGCGGGGCGCCGCTGCAATTTTCCTACGATTATCGTGGAGGCCACATGTTGCAGATCCCCGCTGGTTTGGCAAGCTTCAGTTCCGTGGACCATAAATCTGTCCACGATCGGCTTCTTCCACCGGTCTTGATGACTAGATCGGCATTGGAAATGAG
CAAAATGACGGCGCAGGATATCGTGGAAGCCAAAGCCCTTGCGGCATCCAAGAGCCACAGCGAAGCCGAGCGGAGGCGCCGCGAACGGATTAACAACCATCTTGCCACCCTTCGCAGCCTGCTTCCCAACACAACCAAAACGGATAAAGCTTCTCTGCTGGCGGAGGTCATCGATCATGTTAGAGAGCTGAAACGCATGG
TGGACGACATAGGGCAAACCAGCCCGGTACCCAGCGAAGCCGACGAAGTAAGCCTGGAATATCCTGATCCGAGTGAAGAAGGAAGGCAGGTCATACGCGCTTCCCTGTGCTGCGAAGACCGCCCCGAGCTCCTGTCGGATCTCATAAAAACCCTAAGATCACTCCGGCTCCGCGCAGTCAAGGCGGAGATCGCAACCCTC
GGTGGGAGGGTGAAGAACGTGTTAGTCGTGACCAGCAGTGGCTCCCAGGACCCCAGCGACGTGAGCGAAACCCCCTCCGCTTCCAGCATTCAGGAGGCGCTAAAGGCTGTCATGGAAAGGCAGAATTCCGACGATCTATCGCCTGCAACATCTTCCGGCGGGAATAAAAGACAACGTCAGGTAGGTTGATTCTGCGTATC
TCTGCAAATTTTTGATGATAAACGATTCCGATATCATTTGAATAATCAGAAGTCCATGCAGGCCTCGTGCACTGTAATATTCTCTCTCTCTCTGTCTATGTACTGCTAATATGGTGGACTCTCATCAATCTATCTCTCTGTATATGTTCATGCTGCCAAAATTTCCTAAATTATCTGCAACTTCATACGCTGAATATTTC
TTAC
Intron 2 GTAGCGATTT ... TGTGTTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 36 | 16 | 15 | 9 |
| A2 | 75 | 5 | 3 | 15 |
| A3 | 80 | 2 | 4 | 8 |
| A4 | 50 | 7 | 3 | 7 |
| A5 | 72.73 | 3 | 7 | 8 |
| A6 | 86.21 | 4 | 0 | 25 |
| A7 | 83.33 | 6 | 9 | 30 |
| A8 | 77.78 | 6 | 3 | 21 |
| A9 | 84.38 | 5 | 5 | 27 |
| A10 | 78.57 | 12 | 6 | 44 |
>TRINITY_DN103574_c0_g1_i1 from sample A1 / Example spliced isoformAAATAATTTGAAATTATAGACTGTCGAGTACGCATCGCGTCAATTTATCCAGCGGTGAAAGATGCAAAAAGAAAAAGTGAAAATCGACAAATGAAATGGAAGTAAACCCAGGCATACGGTAAACGGAAGAATGTAGTATGTATGTGGTGGTATCGATCGGAAGGAATCTGCAGCGTCTGCAGAGGTTTGCCCATGGTGGG
ATGAAACCCTAGAATATTTTCCTTCTCTTTTTAAAGAGAACAGTCGGAAGGAGCCTCGAGAATATCGATCCGGCAGGTAGGCAGGGTTTCAGTACCCAGGAATGTTTTGAAAATCTGTGCCCTACAAGTACCAGAAACACCAAACAGCAAGGAAAGGAAACCCAGGTTTTTCTTAATAAATTTTCTTTTCGTTTCTTTTT
GTAAATTTTTTGTCGACTTCAGAAAGGCTCGAGATCCGCGTTCAATACAGTACCCGAGAAATAGCGAAAGAAGAAGCATATTTGCAGTGAGAAATGGTGTAGGAAACGGTACTGGCGATTAAGAAAGGAGGTGCATGAGAAAAGGAAGGAAAATAAAGAGGAATGGAACGCTGTTTCGCTGCTGGCACAGACGAGTCAGG
AGTTCAAGTTGCAGTAAGAAGAAACGCTGCAAAATCTGCAACGTTAGCCAATCTGTTTGCTTTGTATTATCTGTTTCAGACGAAGATAGGTGGTCTGGGCTGGTTATTCGTTCCAAAGGCGGGTGATCCTGTGGGGAAGAGAGGGGCTTAACATTTTGCGTGAGACGAGAAAAGAGATGCAGCAGGACGATCAAGCGGGT
AGCTCAATGAACGCCAGGCGGGCGGATCAAGACTTTAAAATGCTGTTTCCGACCTGGCCGACGATAGCAGTTCCTTCTCACAACGTAGGACAGGGACATCTGGAACCGTTCCAGACGCAAGTGATCCCCGGCCGTGACCAGATTCTGGCGGCGATGGCTTCGGAAGCCGGCTCTTCGTCATCTAATTCGCTCTCGGGGTT
CCAAGACCTCATGAATAGCGGGGCGCCGCTGCAATTTTCCTACGATTATCGTGGAGGCCACATGTTGCAGATCCCCGCTGGTTTGGCAAGCC
>TRINITY_DN103574_c0_g1_i2 from sample A1 / Example unspliced isoform:AAATAATTTGAAATTATAGACTGTCGAGTACGCATCGCGTCAATTTATCCAGCGGTGAAAGATGCAAAAAGAAAAAGTGAAAATCGACAAATGAAATGGAAGTAAACCCAGGCATACGGTAAACGGAAGAATGTAGTATGTATGTGGTGGTATCGATCGGAAGGAATCTGCAGCGTCTGCAGAGGTTTGCCCATGGTGGG
ATGAAACCCTAGAATATTTTCCTTCTCTTTTTAAAGAGAACAGTCGGAAGGAGCCTCGAGAATATCGATCCGGCAGGTAGGCAGGGTTTCAGTACCCAGGAATGTTTTGAAAATCTGTGCCCTACAAGTACCAGAAACACCAAACAGCAAGGAAAGGAAACCCAGGTTTTTCTTAATAAATTTTCTTTTCGTTTCTTTTT
GTAAATTTTTTGTCGACTTCAGAAAGGCTCGAGATCCGCGTTCAATACAGTACCCGAGAAATAGCGAAAGAAGAAGCATATTTGCAGgtagcgatttgaaaactcttgtcgagggtttgagactaaaaccgagcttcttttgaattgtcttccttttgtactggcttctgaatctgtgttttgtttgacgaaagctttta
gcagattaaagatccggtgggtaaagataagtttgttcttggattttgatgtatgtggaaatatcgcagagggaaagattcgagtcggcttttgttttcttttccagaaggagagtttaaacgcgcataagtttgatgtttttatgcattccttttactgtgttgcagTGAGAAATGGTGTAGGAAACGGTACTGGCGAT
TAAGAAAGGAGGTGCATGAGAAAAGGAAGGAAAATAAAGAGGAATGGAACGCTGTTTCGCTGCTGGCACAGACGAGTCAGGAGTTCAAGTTGCAGTAAGAAGAAACGCTGCAAAATCTGCAACGTTAGCCAATCTGTTTGCTTTGTATTATCTGTTTCAGACGAAGATAGGTGGTCTGGGCTGGTTATTCGTTCCAAAGG
CGGGTGATCCTGTGGGGAAGAGAGGGGCTTAACATTTTGCGTGAGACGAGAAAAGAGATGCAGCAGGACGATCAAGCGGGTAGCTCAATGAACGCCAGGCGGGCGGATCAAGACTTTAAAATGCTGTTTCCGACCTGGCCGACGATAGCAGTTCCTTCTCACAACGTAGGACAGGGACATCTGGAACCGTTCCAGACGCA
AGTGATCCCCGGCCGTGACCAGATTCTGGCGGCGATGGCTTCGGAAGCCGGCTCTTCGTCATCTAATTCGCTCTCGGGGTTCCAAGACCTCATGAATAGCGGGGCGCCGCTGCAATTTTCCTACGATTATCGTGGAGGCCACATGTTGCAGATCCCCGCTGGTTTGGCAAGCC
Intron 3 GTTTTTCTTA ... ATATTTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 94.59 | 1 | 19 | 16 |
| A2 | 64.71 | 6 | 17 | 5 |
| A3 | 66.67 | 2 | 6 | 2 |
| A4 | 61.54 | 5 | 9 | 7 |
| A5 | 69.23 | 2 | 6 | 3 |
| A6 | 61.54 | 5 | 12 | 4 |
| A7 | 41.18 | 15 | 15 | 6 |
| A8 | 57.58 | 7 | 13 | 6 |
| A9 | 56.52 | 10 | 21 | 5 |
| A10 | 46.43 | 15 | 14 | 12 |
>TRINITY_DN39298_c0_g1_i4 from sample A8 / Example spliced isoformCGCGGTGAAAGATGCAAAAAGAAAAAGTGAAAATCGACAAATGAAATGGAAGTAAACCCAGGCATACGGTAAACGGAAGAATGTAGTATGTATGTGGTGGTATCGATCGGAAGGAATCTGCAGCGTCTGCAGAGGTTTGCCCATGGTGGGATGAAACCCTAGAATATTTTCCTTCTCTTTTTAAAGAGAACAGTCGGAAG
GAGCCTCGAGAATATCGATCCGGCAGGTAGGCAGGGTTTCAGTACCCAGGAATGTTTTGAAAATCTGTGCCCTACAAGTACCAGAAACACCAAACAGCAAGGAAAGGAAACCCAGTGAGAAATGGTGTAGGAAACGGTACTGGCGATTAAGAAAGGAGGTGCATGAGAAAAGGAAGGAAAATAAAGAGGAATGGAACGCT
GTTTCGCTGCTGGCACAGACGAGTCAGGAGTTCAAGTTGCAGTAAGAAGAAACGCTGCAAAATCTGCAACGTTAGCCAATCTGTTTGCTTTGTATTATCTGTTTCAGACGAAGATAGGTGGTCTGGGCTGGTTATTCGTTCCAAAGGCGGGTGATCCTGTGGGGAAGAGAGGGGCTTAACATTTTGCGTGAGACGAGAAA
AGAGATGCAGCAGGACGATCAAGCGGGTAGCTCAATGAACGCCAGGCGGGCGGATCAAGACTTTAAAATGCTGTTTCCGACCTGGCCGACGATAGCAGTTCCTTCTCACAACGTAGGACAGGGACATCTGGAACCGTTCCAGACGCAAGTGATCCCCGGCCGTGACCAGATTCTGGCGGCGATGGCTTCGGAAGCCGGCT
CTTCGTCATCTAATTCGCTCTCGGGGTTCCAAGACCTCATGAATAGCGGGGCGCCGCTGCAATTTTCCTACGATTATCGTGGAGGCCACATGTTGCAGATCCCCGCTGGTTTGGCAAGCTTCAGTTCCGTGGACCATAAATCTGTCCACGATCGGCTTCTTCCACCGGTCTTGATGACTAGATCGGCATTGGAAATGAGC
AAAATGACGGCGCAGGATATCGTGGAAGCCAAAGCCCTTGCGGCATCCAAGAGCCACAGCGAAGCCGAGCGGAGGCGCCGCGAACGGATTAACAACCATCTTGCCACCCTTCGCAGCCTGCTTCCCAACACAACCAAAACGGATAAAGCTTCTCTGCTGGCGGAGGTCATCGATCATGTTAGAGAGCTGAAACGCATGGT
GGACGACATAGGGCAAACCAGCCCGGTACCCAGCGAAGCCGACGAAGTAAGCCTGGAATATCCTGATCCGAGTGAAGAAGGAAGGCAGGTCATACGCGCTTCCCTGTGCTGCGAAGACCGCCCCGAGCTCCTGTCGGATCTCATAAAAACCCTAAGATCACTCCGGCTCCGCGCAGTCAAGGCGGAGATCGCAACCCTCG
GTGGGAGGGTGAAGAACGTGTTAGTCGTGACCAGCAGTGGCTCCCAGGACCCCAGCGACGTGAGCGAAACCCCCTCCGCTTCCAGCATTCAGGAGGCGCTAAAGGCTGTCATGGAAAGGCAGAATTCCGACGATCTATCGCCTGCAACATCTTCCGGCGGGAATAAAAGACAACGTCAGGTAGGTTGATTCTGCGTATCT
CTGCAAATTTTTGATGATAAACGATTCCGATATCATTTGAATAATCAGAAGTCCATGCAGGCCTCGTGCACTGTAATATTCTCTCTCTCTCTGTCTATGTACTGCTAATATGGTGGACTCTCATCAATCTATCTCTCTGTATATGTTCATGCTGCCAAAATTTCCTAAATTATCTGCAACTTCATACGCTGAATATTTCT
TACATGGAGTTTATAATTTAGACCGTGTATGATTTTCTTCCATTACATCTATTCTCAGTAGTCTGCGCAATCAAAGCCATAAATTAATGGATTTGACGGGAACATGTTGTATTTTTCTGACGGAATATCCATCGCCAACCTTAAATTTTTAAATTTAGCATAGTTCAT
>TRINITY_DN39298_c0_g1_i2 from sample A8 / Example unspliced isoform:CGCGGTGAAAGATGCAAAAAGAAAAAGTGAAAATCGACAAATGAAATGGAAGTAAACCCAGGCATACGGTAAACGGAAGAATGTAGTATGTATGTGGTGGTATCGATCGGAAGGAATCTGCAGCGTCTGCAGAGGTTTGCCCATGGTGGGATGAAACCCTAGAATATTTTCCTTCTCTTTTTAAAGAGAACAGTCGGAAG
GAGCCTCGAGAATATCGATCCGGCAGGTAGGCAGGGTTTCAGTACCCAGGAATGTTTTGAAAATCTGTGCCCTACAAGTACCAGAAACACCAAACAGCAAGGAAAGGAAACCCAGgtttttcttaataaattttcttttcgtttctttttgtaaattttttgtcgacttcagaaaggctcgagatccgcgttcaatacag
tacccgagaaatagcgaaagaagaagcatatttgcagTGAGAAATGGTGTAGGAAACGGTACTGGCGATTAAGAAAGGAGGTGCATGAGAAAAGGAAGGAAAATAAAGAGGAATGGAACGCTGTTTCGCTGCTGGCACAGACGAGTCAGGAGTTCAAGTTGCAGTAAGAAGAAACGCTGCAAAATCTGCAACGTTAGCCA
ATCTGTTTGCTTTGTATTATCTGTTTCAGACGAAGATAGGTGGTCTGGGCTGGTTATTCGTTCCAAAGGCGGGTGATCCTGTGGGGAAGAGAGGGGCTTAACATTTTGCGTGAGACGAGAAAAGAGATGCAGCAGGACGATCAAGCGGGTAGCTCAATGAACGCCAGGCGGGCGGATCAAGACTTTAAAATGCTGTTTCC
GACCTGGCCGACGATAGCAGTTCCTTCTCACAACGTAGGACAGGGACATCTGGAACCGTTCCAGACGCAAGTGATCCCCGGCCGTGACCAGATTCTGGCGGCGATGGCTTCGGAAGCCGGCTCTTCGTCATCTAATTCGCTCTCGGGGTTCCAAGACCTCATGAATAGCGGGGCGCCGCTGCAATTTTCCTACGATTATC
GTGGAGGCCACATGTTGCAGATCCCCGCTGGTTTGGCAAGCTTCAGTTCCGTGGACCATAAATCTGTCCACGATCGGCTTCTTCCACCGGTCTTGATGACTAGATCGGCATTGGAAATGAGCAAAATGACGGCGCAGGATATCGTGGAAGCCAAAGCCCTTGCGGCATCCAAGAGCCACAGCGAAGCCGAGCGGAGGCGC
CGCGAACGGATTAACAACCATCTTGCCACCCTTCGCAGCCTGCTTCCCAACACAACCAAAACGGATAAAGCTTCTCTGCTGGCGGAGGTCATCGATCATGTTAGAGAGCTGAAACGCATGGTGGACGACATAGGGCAAACCAGCCCGGTACCCAGCGAAGCCGACGAAGTAAGCCTGGAATATCCTGATCCGAGTGAAGA
AGGAAGGCAGGTCATACGCGCTTCCCTGTGCTGCGAAGACCGCCCCGAGCTCCTGTCGGATCTCATAAAAACCCTAAGATCACTCCGGCTCCGCGCAGTCAAGGCGGAGATCGCAACCCTCGGTGGGAGGGTGAAGAACGTGTTAGTCGTGACCAGCAGTGGCTCCCAGGACCCCAGCGACGTGAGCGAAACCCCCTCCG
CTTCCAGCATTCAGGAGGCGCTAAAGGCTGTCATGGAAAGGCAGAATTCCGACGATCTATCGCCTGCAACATCTTCCGGCGGGAATAAAAGACAACGTCAGGTAGGTTGATTCTGCGTATCTCTGCAAATTTTTGATGATAAACGATTCCGATATCATTTGAATAATCAGAAGTCCATGCAGGCCTCGTGCACTGTAATA
TTCTCTCTCTCTCTGTCTATGTACTGCTAATATGGTGGACTCTCATCAATCTATCTCTCTGTATATGTTCATGCTGCCAAAATTTCCTAAATTATCTGCAACTTCATACGCTGAATATTTCTTACATGGAGTTTATAATTTAGACCGTGTATGATTTTCTTCCATTACATCTATTCTCAGTAGTCTGCGCAATCAAAGCC
ATAAATTAATGGATTTGACGGGAACATGTTGTATTTTTCTGACGGAATATCCATCGCCAACCTTAAATTTTTAAATTTAGCATAGTTCAT
Intron 4 GTTTTTCTTA ... TGTGTTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 93.33 | 1 | 19 | 9 |
| A2 | 72.73 | 6 | 17 | 15 |
| A3 | 77.78 | 2 | 6 | 8 |
| A4 | 64.29 | 5 | 11 | 7 |
| A5 | 77.78 | 2 | 6 | 8 |
| A6 | 78.72 | 5 | 12 | 25 |
| A7 | 60 | 15 | 15 | 30 |
| A8 | 70.83 | 7 | 13 | 21 |
| A9 | 70.59 | 10 | 21 | 27 |
| A10 | 65.91 | 15 | 14 | 44 |
>TRINITY_DN33548_c0_g1_i1 from sample A9 / Example spliced isoformGCGCCGTCGTGCCGTATGGATGGGATCGGTAACGGCCGTAAAAATCCCGATGCGAATTATTATAATTATAAACGGCAAGAAAGCAGGACCCATGCGAAAGAGAGATTAAATAATTTGAAATTATAGACTGTCGAGTACGCATCGCGTCAATTTATCCAGCGGTGAAAGATGCAAAAAGAAAAAGTGAAAATCGACAAATG
AAATGGAAGTAAACCCAGGCATACGGTAAACGGAAGAATGTAGTATGTATGTGGTGGTATCGATCGGAAGGAATCTGCAGCGTCTGCAGAGGTTTGCCCATGGTGGGATGAAACCCTAGAATATTTTCCTTCTCTTTTTAAAGAGAACAGTCGGAAGGAGCCTCGAGAATATCGATCCGGCAGGTAGGCAGGGTTTCAGT
ACCCAGGAATGTTTTGAAAATCTGTGCCCTACAAGTACCAGAAACACCAAACAGCAAGGAAAGGAAACCCAGTGAGAAATGGTGTAGGAAACGGTACTGGCGATTAAGAAAGGAGGTGCATGAGAAAAGGAAGGAAAATAAAGAGGAATGGAACGCTGTTTCGCTGCTGGCACAGACGAGTCAGGAGTTCAAGTTGCAGT
AAGAAGAAACGCTGCAAAATCTGCAACGTTAGCCAATCTGTCTGCTTTGTATTATCTGTTTCAGACGAAGATAGGTGGTCTGGGCTGGTTATTCGTTCCAAAGGCGGGTGATCCTGTGGGGAAGAGAGGGGCTTAACATTTTGCGTGAGACGAGAAAAGAGATGCAGCAGGACGATCAAGCGGGTAGCTCAATGAACGCC
AGGCGGGCGGATCAAGACTTTAAAATGCTGTTTCCGACCTGGCCGACGATAGCAGTTCCTTCTCACAACGTAGGACAGGGACATCTGGAACCGTTCCAGACGCAAGTGATCCCCGGCCGTGACCAGATTCTGGCGGCGATGGCTTCGGAAGCCGGCTCTTCGTCATCTAATTCGCTCTCGGGGTTCCAAGACCTCATGAA
TAGCGGGGCGCCGCTGCAATTTTCCTACGATTATCGTGGAGGCCACATGTTGCAGATCCCCGCTGGTTTGGCAAGCTTCAGTTCCGTGGACCATAAATCTGTCCACGATCGGCTTCTTCCACCGGTCTTGATGACTAGATCGGCATTGGAAATGAGCAAAATGACGGCGCAGGATATCGTGGAAGCCAAAGCCCTTGCGG
CATCCAAGAGCCACAGCGAAGCCGAGCGGAGGCGCCGCGAACGGATTAACAACCATCTTGCCACCCTTCGCAGCCTGCTTCCCAACACAACCAAAACGGATAAAGCTTCTCTGCTGGCGGAGGTCATCGATCATGTTAGAGAGCTGAAACGCATGGTGGACGACATAGGGCAAACCAGCCCGGTACCCAGCGAAGCCGAC
GAAGTAAGCCTGGAATATCCTGATCCGAGTGAAGAAGGAAGGCAGGTCATACGCGCTTCCCTGTGCTGCGAAGACCGCCCCGAGCTCCTGTCGGATCTCATAAAAACCCTAAGATCACTCCGGCTCCGCGCAGTCAAGGCGGAGATCGCAACCCTCGGTGGGAGGGTGAAGAACGTGTTAGTCGTGACCAGCAGTGGCTC
CCAGGACCCCAGCGACGTGAGCGAAACCCCCTCCGCTTCCAGCATTCAGGAGGCGCTAAAGGCTGTCATGGAAAGGCAGAATTCCGACGATCTATCGCCTGCAACATCTTCCGGCGGGAATAAAAGACAACGTCAGGTAGGTTGATTCTGCGTATCTCTGCAAATTTTTGATGATAAACGATTCCGATATCATTTGAATA
ATCAGAAGTCCATGCAGGCCTCGTGCACTGTAATATTCTCTCTCTCTCTGTCTATGTACTGCTAATATGGTGGACTCTCATCAATCTATCTCTCTGTATATGTTCATGCTGCCAAAATTTCCTAAATTATCTGCAACTTCATACGCTGAATATTTCTTACATGGAGTTTATAATTTAGACCGTGTATGATTTTCTTCCAT
TACATCTATTCTCAGTAGTCTGCGCAATCAAAGCCATAAATTAATGGATTTGACGGGAACATGTTGTATTTTTCTGACGGAATATCCATCGCCAACCTTAAATTTTTAAATTTA
>TRINITY_DN33548_c0_g1_i3 from sample A9 / Example unspliced isoform:GCGCCGTCGTGCCGTATGGATGGGATCGGTAACGGCCGTAAAAATCCCGATGCGAATTATTATAATTATAAACGGCAAGAAAGCAGGACCCATGCGAAAGAGAGATTAAATAATTTGAAATTATAGACTGTCGAGTACGCATCGCGTCAATTTATCCAGCGGTGAAAGATGCAAAAAGAAAAAGTGAAAATCGACAAATG
AAATGGAAGTAAACCCAGGCATACGGTAAACGGAAGAATGTAGTATGTATGTGGTGGTATCGATCGGAAGGAATCTGCAGCGTCTGCAGAGGTTTGCCCATGGTGGGATGAAACCCTAGAATATTTTCCTTCTCTTTTTAAAGAGAACAGTCGGAAGGAGCCTCGAGAATATCGATCCGGCAGGTAGGCAGGGTTTCAGT
ACCCAGGAATGTTTTGAAAATCTGTGCCCTACAAGTACCAGAAACACCAAACAGCAAGGAAAGGAAACCCAGgtttttcttaataaattttcttttcgtttctttttgtaaattttttgtcgacttcagaaaggctcgagatccgcgttcaatacagtacccgagaaatagcgaaagaagaagcatatttgcagctttta
gcagattaaagatccggtgggtaaagataagtttgttcttggattttgatgtatgtggaaatatcgcagagggaaagattcgagtcggcttttgttttcttttccagaaggagagtttaaacgcgcataagtttgatgtttttatgcattccttttactgtgttgcagTGAGAAATGGTGTAGGAAACGGTACTGGCGAT
TAAGAAAGGAGGTGCATGAGAAAAGGAAGGAAAATAAAGAGGAATGGAACGCTGTTTCGCTGCTGGCACAGACGAGTCAGGAGTTCAAGTTGCAGTAAGAAGAAACGCTGCAAAATCTGCAACGTTAGCCAATCTGTCTGCTTTGTATTATCTGTTTCAGACGAAGATAGGTGGTCTGGGCTGGTTATTCGTTCCAAAGG
CGGGTGATCCTGTGGGGAAGAGAGGGGCTTAACATTTTGCGTGAGACGAGAAAAGAGATGCAGCAGGACGATCAAGCGGGTAGCTCAATGAACGCCAGGCGGGCGGATCAAGACTTTAAAATGCTGTTTCCGACCTGGCCGACGATAGCAGTTCCTTCTCACAACGTAGGACAGGGACATCTGGAACCGTTCCAGACGCA
AGTGATCCCCGGCCGTGACCAGATTCTGGCGGCGATGGCTTCGGAAGCCGGCTCTTCGTCATCTAATTCGCTCTCGGGGTTCCAAGACCTCATGAATAGCGGGGCGCCGCTGCAATTTTCCTACGATTATCGTGGAGGCCACATGTTGCAGATCCCCGCTGGTTTGGCAAGCTTCAGTTCCGTGGACCATAAATCTGTCC
ACGATCGGCTTCTTCCACCGGTCTTGATGACTAGATCGGCATTGGAAATGAGCAAAATGACGGCGCAGGATATCGTGGAAGCCAAAGCCCTTGCGGCATCCAAGAGCCACAGCGAAGCCGAGCGGAGGCGCCGCGAACGGATTAACAACCATCTTGCCACCCTTCGCAGCCTGCTTCCCAACACAACCAAAACGGATAAA
GCTTCTCTGCTGGCGGAGGTCATCGATCATGTTAGAGAGCTGAAACGCATGGTGGACGACATAGGGCAAACCAGCCCGGTACCCAGCGAAGCCGACGAAGTAAGCCTGGAATATCCTGATCCGAGTGAAGAAGGAAGGCAGGTCATACGCGCTTCCCTGTGCTGCGAAGACCGCCCCGAGCTCCTGTCGGATCTCATAAA
AACCCTAAGATCACTCCGGCTCCGCGCAGTCAAGGCGGAGATCGCAACCCTCGGTGGGAGGGTGAAGAACGTGTTAGTCGTGACCAGCAGTGGCTCCCAGGACCCCAGCGACGTGAGCGAAACCCCCTCCGCTTCCAGCATTCAGGAGGCGCTAAAGGCTGTCATGGAAAGGCAGAATTCCGACGATCTATCGCCTGCAA
CATCTTCCGGCGGGAATAAAAGACAACGTCAGGTAGGTTGATTCTGCGTATCTCTGCAAATTTTTGATGATAAACGATTCCGATATCATTTGAATAATCAGAAGTCCATGCAGGCCTCGTGCACTGTAATATTCTCTCTCTCTCTGTCTATGTACTGCTAATATGGTGGACTCTCATCAATCTATCTCTCTGTATATGTT
CATGCTGCCAAAATTTCCTAAATTATCTGCAACTTCATACGCTGAATATTTCTTACATGGAGTTTATAATTTAGACCGTGTATGATTTTCTTCCATTACATCTATTCTCAGTAGTCTGCGCAATCAAAGCCATAAATTAATGGATTTGACGGGAACATGTTGTATTTTTCTGACGGAATATCCATCGCCAACCTTAAATT
TTTAAATTTA
Intron 5 GTAGCGATTT ... TTGACGAAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 42.37 | 17 | 15 | 10 |
| A2 | 38.46 | 4 | 3 | 2 |
| A3 | 100 | 0 | 4 | 2 |
| A4 | 50 | 4 | 3 | 5 |
| A5 | 68.42 | 3 | 7 | 6 |
| A6 | 100 | 0 | 0 | 4 |
| A7 | 55.56 | 4 | 9 | 1 |
| A8 | 100 | 0 | 3 | 8 |
| A9 | 51.72 | 7 | 5 | 10 |
| A10 | 52.38 | 5 | 6 | 5 |
>TRINITY_DN33548_c0_g1_i3 from sample A9 / Example spliced isoformGCGCCGTCGTGCCGTATGGATGGGATCGGTAACGGCCGTAAAAATCCCGATGCGAATTATTATAATTATAAACGGCAAGAAAGCAGGACCCATGCGAAAGAGAGATTAAATAATTTGAAATTATAGACTGTCGAGTACGCATCGCGTCAATTTATCCAGCGGTGAAAGATGCAAAAAGAAAAAGTGAAAATCGACAAATG
AAATGGAAGTAAACCCAGGCATACGGTAAACGGAAGAATGTAGTATGTATGTGGTGGTATCGATCGGAAGGAATCTGCAGCGTCTGCAGAGGTTTGCCCATGGTGGGATGAAACCCTAGAATATTTTCCTTCTCTTTTTAAAGAGAACAGTCGGAAGGAGCCTCGAGAATATCGATCCGGCAGGTAGGCAGGGTTTCAGT
ACCCAGGAATGTTTTGAAAATCTGTGCCCTACAAGTACCAGAAACACCAAACAGCAAGGAAAGGAAACCCAGGTTTTTCTTAATAAATTTTCTTTTCGTTTCTTTTTGTAAATTTTTTGTCGACTTCAGAAAGGCTCGAGATCCGCGTTCAATACAGTACCCGAGAAATAGCGAAAGAAGAAGCATATTTGCAGCTTTTA
GCAGATTAAAGATCCGGTGGGTAAAGATAAGTTTGTTCTTGGATTTTGATGTATGTGGAAATATCGCAGAGGGAAAGATTCGAGTCGGCTTTTGTTTTCTTTTCCAGAAGGAGAGTTTAAACGCGCATAAGTTTGATGTTTTTATGCATTCCTTTTACTGTGTTGCAGTGAGAAATGGTGTAGGAAACGGTACTGGCGAT
TAAGAAAGGAGGTGCATGAGAAAAGGAAGGAAAATAAAGAGGAATGGAACGCTGTTTCGCTGCTGGCACAGACGAGTCAGGAGTTCAAGTTGCAGTAAGAAGAAACGCTGCAAAATCTGCAACGTTAGCCAATCTGTCTGCTTTGTATTATCTGTTTCAGACGAAGATAGGTGGTCTGGGCTGGTTATTCGTTCCAAAGG
CGGGTGATCCTGTGGGGAAGAGAGGGGCTTAACATTTTGCGTGAGACGAGAAAAGAGATGCAGCAGGACGATCAAGCGGGTAGCTCAATGAACGCCAGGCGGGCGGATCAAGACTTTAAAATGCTGTTTCCGACCTGGCCGACGATAGCAGTTCCTTCTCACAACGTAGGACAGGGACATCTGGAACCGTTCCAGACGCA
AGTGATCCCCGGCCGTGACCAGATTCTGGCGGCGATGGCTTCGGAAGCCGGCTCTTCGTCATCTAATTCGCTCTCGGGGTTCCAAGACCTCATGAATAGCGGGGCGCCGCTGCAATTTTCCTACGATTATCGTGGAGGCCACATGTTGCAGATCCCCGCTGGTTTGGCAAGCTTCAGTTCCGTGGACCATAAATCTGTCC
ACGATCGGCTTCTTCCACCGGTCTTGATGACTAGATCGGCATTGGAAATGAGCAAAATGACGGCGCAGGATATCGTGGAAGCCAAAGCCCTTGCGGCATCCAAGAGCCACAGCGAAGCCGAGCGGAGGCGCCGCGAACGGATTAACAACCATCTTGCCACCCTTCGCAGCCTGCTTCCCAACACAACCAAAACGGATAAA
GCTTCTCTGCTGGCGGAGGTCATCGATCATGTTAGAGAGCTGAAACGCATGGTGGACGACATAGGGCAAACCAGCCCGGTACCCAGCGAAGCCGACGAAGTAAGCCTGGAATATCCTGATCCGAGTGAAGAAGGAAGGCAGGTCATACGCGCTTCCCTGTGCTGCGAAGACCGCCCCGAGCTCCTGTCGGATCTCATAAA
AACCCTAAGATCACTCCGGCTCCGCGCAGTCAAGGCGGAGATCGCAACCCTCGGTGGGAGGGTGAAGAACGTGTTAGTCGTGACCAGCAGTGGCTCCCAGGACCCCAGCGACGTGAGCGAAACCCCCTCCGCTTCCAGCATTCAGGAGGCGCTAAAGGCTGTCATGGAAAGGCAGAATTCCGACGATCTATCGCCTGCAA
CATCTTCCGGCGGGAATAAAAGACAACGTCAGGTAGGTTGATTCTGCGTATCTCTGCAAATTTTTGATGATAAACGATTCCGATATCATTTGAATAATCAGAAGTCCATGCAGGCCTCGTGCACTGTAATATTCTCTCTCTCTCTGTCTATGTACTGCTAATATGGTGGACTCTCATCAATCTATCTCTCTGTATATGTT
CATGCTGCCAAAATTTCCTAAATTATCTGCAACTTCATACGCTGAATATTTCTTACATGGAGTTTATAATTTAGACCGTGTATGATTTTCTTCCATTACATCTATTCTCAGTAGTCTGCGCAATCAAAGCCATAAATTAATGGATTTGACGGGAACATGTTGTATTTTTCTGACGGAATATCCATCGCCAACCTTAAATT
TTTAAATTTA
>TRINITY_DN33548_c0_g1_i2 from sample A9 / Example unspliced isoform:GCGCCGTCGTGCCGTATGGATGGGATCGGTAACGGCCGTAAAAATCCCGATGCGAATTATTATAATTATAAACGGCAAGAAAGCAGGACCCATGCGAAAGAGAGATTAAATAATTTGAAATTATAGACTGTCGAGTACGCATCGCGTCAATTTATCCAGCGGTGAAAGATGCAAAAAGAAAAAGTGAAAATCGACAAATG
AAATGGAAGTAAACCCAGGCATACGGTAAACGGAAGAATGTAGTATGTATGTGGTGGTATCGATCGGAAGGAATCTGCAGCGTCTGCAGAGGTTTGCCCATGGTGGGATGAAACCCTAGAATATTTTCCTTCTCTTTTTAAAGAGAACAGTCGGAAGGAGCCTCGAGAATATCGATCCGGCAGGTAGGCAGGGTTTCAGT
ACCCAGGAATGTTTTGAAAATCTGTGCCCTACAAGTACCAGAAACACCAAACAGCAAGGAAAGGAAACCCAGGTTTTTCTTAATAAATTTTCTTTTCGTTTCTTTTTGTAAATTTTTTGTCGACTTCAGAAAGGCTCGAGATCCGCGTTCAATACAGTACCCGAGAAATAGCGAAAGAAGAAGCATATTTGCAGgtagcg
atttgaaaactcttgtcgagggtttgagactaaaaccgagcttcttttgaattgtcttccttttgtactggcttctgaatctgtgttttgtttgacgaaagCTTTTAGCAGATTAAAGATCCGGTGGGTAAAGATAAGTTTGTTCTTGGATTTTGATGTATGTGGAAATATCGCAGAGGGAAAGATTCGAGTCGGCTTTT
GTTTTCTTTTCCAGAAGGAGAGTTTAAACGCGCATAAGTTTGATGTTTTTATGCATTCCTTTTACTGTGTTGCAGTGAGAAATGGTGTAGGAAACGGTACTGGCGATTAAGAAAGGAGGTGCATGAGAAAAGGAAGGAAAATAAAGAGGAATGGAACGCTGTTTCGCTGCTGGCACAGACGAGTCAGGAGTTCAAGTTGC
AGTAAGAAGAAACGCTGCAAAATCTGCAACGTTAGCCAATCTGTCTGCTTTGTATTATCTGTTTCAGACGAAGATAGGTGGTCTGGGCTGGTTATTCGTTCCAAAGGCGGGTGATCCTGTGGGGAAGAGAGGGGCTTAACATTTTGCGTGAGACGAGAAAAGAGATGCAGCAGGACGATCAAGCGGGTAGCTCAATGAAC
GCCAGGCGGGCGGATCAAGACTTTAAAATGCTGTTTCCGACCTGGCCGACGATAGCAGTTCCTTCTCACAACGTAGGACAGGGACATCTGGAACCGTTCCAGACGCAAGTGATCCCCGGCCGTGACCAGATTCTGGCGGCGATGGCTTCGGAAGCCGGCTCTTCGTCATCTAATTCGCTCTCGGGGTTCCAAGACCTCAT
GAATAGCGGGGCGCCGCTGCAATTTTCCTACGATTATCGTGGAGGCCACATGTTGCAGATCCCCGCTGGTTTGGCAAGCTTCAGTTCCGTGGACCATAAATCTGTCCACGATCGGCTTCTTCCACCGGTCTTGATGACTAGATCGGCATTGGAAATGAGCAAAATGACGGCGCAGGATATCGTGGAAGCCAAAGCCCTTG
CGGCATCCAAGAGCCACAGCGAAGCCGAGCGGAGGCGCCGCGAACGGATTAACAACCATCTTGCCACCCTTCGCAGCCTGCTTCCCAACACAACCAAAACGGATAAAGCTTCTCTGCTGGCGGAGGTCATCGATCATGTTAGAGAGCTGAAACGCATGGTGGACGACATAGGGCAAACCAGCCCGGTACCCAGCGAAGCC
GACGAAGTAAGCCTGGAATATCCTGATCCGAGTGAAGAAGGAAGGCAGGTCATACGCGCTTCCCTGTGCTGCGAAGACCGCCCCGAGCTCCTGTCGGATCTCATAAAAACCCTAAGATCACTCCGGCTCCGCGCAGTCAAGGCGGAGATCGCAACCCTCGGTGGGAGGGTGAAGAACGTGTTAGTCGTGACCAGCAGTGG
CTCCCAGGACCCCAGCGACGTGAGCGAAACCCCCTCCGCTTCCAGCATTCAGGAGGCGCTAAAGGCTGTCATGGAAAGGCAGAATTCCGACGATCTATCGCCTGCAACATCTTCCGGCGGGAATAAAAGACAACGTCAGGTAGGTTGATTCTGCGTATCTCTGCAAATTTTTGATGATAAACGATTCCGATATCATTTGA
ATAATCAGAAGTCCATGCAGGCCTCGTGCACTGTAATATTCTCTCTCTCTCTGTCTATGTACTGCTAATATGGTGGACTCTCATCAATCTATCTCTCTGTATATGTTCATGCTGCCAAAATTTCCTAAATTATCTGCAACTTCATACGCTGAATATTTCTTACATGGAGTTTATAATTTAGACCGTGTATGATTTTCTTC
CATTACATCTATTCTCAGTAGTCTGCGCAATCAAAGCCATAAATTAATGGATTTGACGGGAACATGTTGTATTTTTCTGACGGAATATCCATCGCCAACCTTAAATTTTTAAATTTA
Intron 6 GTTTTTCTTA ... TGTGTTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 93.33 | 1 | 19 | 9 |
| A2 | 72.73 | 6 | 17 | 15 |
| A3 | 77.78 | 2 | 6 | 8 |
| A4 | 64.29 | 5 | 11 | 7 |
| A5 | 77.78 | 2 | 6 | 8 |
| A6 | 78.72 | 5 | 12 | 25 |
| A7 | 60 | 15 | 15 | 30 |
| A8 | 70.83 | 7 | 13 | 21 |
| A9 | 70.59 | 10 | 21 | 27 |
| A10 | 65.91 | 15 | 14 | 44 |
>TRINITY_DN42025_c0_g2_i2 from sample A7 / Example spliced isoformGAGAGATTAAATAATTTGAAATTATAGACTGTCGAGTACGCATCGCGTCAATTTATCCAGCGGTGAAAGATGCAAAAAGAAAAAGTGAAAATCGACAAATGAAATGGAAGTAAACCCAGGCATACGGTAAACGGAAGAATGTAGTATGTATGTGGTGGTATCGATCGGAAGGAATCTGCAGCGTCTGCAGAGGTTTGCCC
ATGGTGGGATGAAACCCTAGAATATTTTCCTTCTCTTTTTAAAGAGAACAGTCGGAAGGAGCCTCGAGAATATCGATCCGGCAGGTGGGCAGGGTTTCAGTACCCAGGAATGTTTTGAAAATCTGTGCCCTACAAGTACCAGAAACACCAAACAGCAAGGAAAGGAAACCCAGTGAGAAATGGTGTAGGAAACGGTACTG
GCGATTAAGAAAGGAGGTGCATGAGAAAAGGAAGGAAAATAAAGAGGAATGGAACGCTGTTTCGCTGCTGGCACAGACGAGTCAGGAGTTCAAGTTGCAGTAAGAAGAAACGCTGCAAAATCTGCAACGTTAGCCAATCTGTTTGCTTTGTATTATCTGTTTCAGACGAAGATAGGTGGTCTGGGCTGGTTATTCGTTCC
AAAGGCGGGTGATCCTGTGGGGAAGAGAGGGGCTTAACATTTTGCGTGAGACGAGAAAAGAGATGCAGCAGGACGATCAAGCGGGTAGCTCAATGAACGCCAGGCGGGCGGATCAAGACTTTAAAATGCTGTTTCCGACCTGGCCGACGATAGCAGTTCCTTCTCACAACGTAGGACAGGGACATCTGGAACCGTTCCAG
ACGCAAGTGATCCCCGGCCGTGACCAGATTCTGGCGGCGATGGCTTCGGAAGCCGGCTCTTCGTCATCTAATTCGCTCTCGGGGTTCCAAGACCTCATGAATAGCGGGGCGCCGCTGCAATTTTCCTACGATTATCGTGGAGGCCACATGTTGCAGATCCCCGCTGGTTTGGCAAGCTTCAGTTCCGTGGACCATAAATC
TGTCCACGATCGGCTTCTTCCACCGGTCTTGATGACTAGATCGGCATTGGAAATGAGCAAAATGACGGCGCAGGATATCGTGGAAGCCAAAGCCCTTGCGGCATCCAAGAGCCACAGCGAAGCCGAGCGGAGGCGCCGCGAACGGATTAACAACCATCTTGCCACCCTTCGCAGCCTGCTTCCCAACACAACCAAAACGG
ATAAAGCTTCTCTGCTGGCGGAGGTCATCGATCATGTTAGAGAGCTGAAACGCATGGTGGACGACATAGGGCAAACCAGCCCGGTACCCAGCGAAGCCGACGAAGTAAGCCTGGAATATCCTGATCCGAGTGAAGAAGGAAGGCAGGTCATACGCGCTTCCCTGTGCTGCGAAGACCGCCCCGAGCTCCTGTCGGATCTC
ATAAAAACCCTAAGATCACTCCGGCTCCGCGCAGTCAAGGCGGAGATCGCAACCCTCGGTGGGAGGGTGAAGAACGTGTTAGTCGTGACCAGCAGTGGCTCCCAGGACCCCAGCGACGTGAGCGAAACCCCCTCCGCTTCCAGCATTCAGGAGGCGCTAAAGGCTGTCATGGAAAGGCAGAATTCCGACGATCTATCGCC
TGCAACATCTTCCGGCGGGAATAAAAGACAACGTCAGGTAGGTTGATTCTGCGTATCTCTGCAAATTTTTGATGATAAACGATTCCGATATCATTTGAATAATCAGAAGTCCATGCAGGCCTCGTGCACTGTAATATTCTCTCTCTCTCTGTCTATGTACTGCTAATATGGTGGACTCTCATCAATCTATCTCTCTGTAT
ATGTTCATGCTGCCAAAATTTCCTAAATTATCTGCAACTTCATACGCTGAATATTTCTTACATGGAGTTTATAATTTAGACCGTGTATGATTTTCTTCCATTACATCTATTCTCAGTAGTCTGCGCAATCAAAGCCATAAATTAATGGATTTGACGGGAACATGTTGTATTTTTCTGACGGAATATCCATCGCCAACCTT
AAATTTTTAAATT
>TRINITY_DN42025_c0_g2_i1 from sample A7 / Example unspliced isoform:GAGAGATTAAATAATTTGAAATTATAGACTGTCGAGTACGCATCGCGTCAATTTATCCAGCGGTGAAAGATGCAAAAAGAAAAAGTGAAAATCGACAAATGAAATGGAAGTAAACCCAGGCATACGGTAAACGGAAGAATGTAGTATGTATGTGGTGGTATCGATCGGAAGGAATCTGCAGCGTCTGCAGAGGTTTGCCC
ATGGTGGGATGAAACCCTAGAATATTTTCCTTCTCTTTTTAAAGAGAACAGTCGGAAGGAGCCTCGAGAATATCGATCCGGCAGGTGGGCAGGGTTTCAGTACCCAGGAATGTTTTGAAAATCTGTGCCCTACAAGTACCAGAAACACCAAACAGCAAGGAAAGGAAACCCAGgtttttcttaataaattttcttttcgt
ttctttttgtaaattttttgtcgacttcagaaaggctcgagatccgcgttcaatacagtacccgagaaatagcgaaagaagaagcatatttgcaggtagcgatttgaaaactcttgtcgagggtttgagactaaaaccgagcttcttttgaattgtcttccttttgtactggcttctgaatctgtgttttgtttgacgaa
agcttttagcagattaaagatccggtgggtaaagataagtttgttcttggattttgatgtatgtggaaatatcgcagagggaaagattcgagtcggcttttgttttcttttccagaaggagagtttaaacgcgcataagtttgatgtttttatgcattccttttactgtgttgcagTGAGAAATGGTGTAGGAAACGGTA
CTGGCGATTAAGAAAGGAGGTGCATGAGAAAAGGAAGGAAAATAAAGAGGAATGGAACGCTGTTTCGCTGCTGGCACAGACGAGTCAGGAGTTCAAGTTGCAGTAAGAAGAAACGCTGCAAAATCTGCAACGTTAGCCAATCTGTTTGCTTTGTATTATCTGTTTCAGACGAAGATAGGTGGTCTGGGCTGGTTATTCGT
TCCAAAGGCGGGTGATCCTGTGGGGAAGAGAGGGGCTTAACATTTTGCGTGAGACGAGAAAAGAGATGCAGCAGGACGATCAAGCGGGTAGCTCAATGAACGCCAGGCGGGCGGATCAAGACTTTAAAATGCTGTTTCCGACCTGGCCGACGATAGCAGTTCCTTCTCACAACGTAGGACAGGGACATCTGGAACCGTTC
CAGACGCAAGTGATCCCCGGCCGTGACCAGATTCTGGCGGCGATGGCTTCGGAAGCCGGCTCTTCGTCATCTAATTCGCTCTCGGGGTTCCAAGACCTCATGAATAGCGGGGCGCCGCTGCAATTTTCCTACGATTATCGTGGAGGCCACATGTTGCAGATCCCCGCTGGTTTGGCAAGCTTCAGTTCCGTGGACCATAA
ATCTGTCCACGATCGGCTTCTTCCACCGGTCTTGATGACTAGATCGGCATTGGAAATGAGCAAAATGACGGCGCAGGATATCGTGGAAGCCAAAGCCCTTGCGGCATCCAAGAGCCACAGCGAAGCCGAGCGGAGGCGCCGCGAACGGATTAACAACCATCTTGCCACCCTTCGCAGCCTGCTTCCCAACACAACCAAAA
CGGATAAAGCTTCTCTGCTGGCGGAGGTCATCGATCATGTTAGAGAGCTGAAACGCATGGTGGACGACATAGGGCAAACCAGCCCGGTACCCAGCGAAGCCGACGAAGTAAGCCTGGAATATCCTGATCCGAGTGAAGAAGGAAGGCAGGTCATACGCGCTTCCCTGTGCTGCGAAGACCGCCCCGAGCTCCTGTCGGAT
CTCATAAAAACCCTAAGATCACTCCGGCTCCGCGCAGTCAAGGCGGAGATCGCAACCCTCGGTGGGAGGGTGAAGAACGTGTTAGTCGTGACCAGCAGTGGCTCCCAGGACCCCAGCGACGTGAGCGAAACCCCCTCCGCTTCCAGCATTCAGGAGGCGCTAAAGGCTGTCATGGAAAGGCAGAATTCCGACGATCTATC
GCCTGCAACATCTTCCGGCGGGAATAAAAGACAACGTCAGGTAGGTTGATTCTGCGTATCTCTGCAAATTTTTGATGATAAACGATTCCGATATCATTTGAATAATCAGAAGTCCATGCAGGCCTCGTGCACTGTAATATTCTCTCTCTCTCTGTCTATGTACTGCTAATATGGTGGACTCTCATCAATCTATCTCTCTG
TATATGTTCATGCTGCCAAAATTTCCTAAATTATCTGCAACTTCATACGCTGAATATTTCTTACATGGAGTTTATAATTTAGACCGTGTATGATTTTCTTCCATTACATCTATTCTCAGTAGTCTGCGCAATCAAAGCCATAAATTAATGGATTTGACGGGAACATGTTGTATTTTTCTGACGGAATATCCATCGCCAAC
CTTAAATTTTTAAATT