sp|Q84WK5|GID8_ARATH ----> Protein GID8 homolog

Intron 1 GTATGATTTT ... CCGATAACAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	36.84	18	7	14
A2	24.38	25.3	14.3	2
A3	28	18	10	4
A4	23.35	30.7	16.7	2
A5	33.33	11	5	6
A6	9.5	81	16	1
A7	11.92	85	20	3
A8	8.03	63	6	5
A9	13.8	64.6	17.7	3
A10	15.22	39	11	3

>TRINITY_DN119157_c0_g1_i7 from sample A1 / Example spliced isoform

CAAAACTTTCAACAACCGGCTTTAGCCGGGTTACGCAGGATCCTATCAAATGTATGACAAATATGTGCGATAAAAAAAAAGTCAATGTATTATTTTTGTTAAGATCGAAACTGCTTGTGTGATCTGCGTAGAGATGAGAAAGTGAAGTCGTTTTTTAACGAAAAAATAGCAGGCGTTGAAGAGGTCGAATCCCGTGATCG
TTCTTATCAACACCAGTCATGCAGAGCAATAAGGTCAATTTGGTAATTCGTTAATGCCGAGAGAATTTTGGGCTTATAGTGGCTAATTGTGGTTTACTGGACCGGCAAATTAGTGTCTGGGATGGACGTAGATCCTCGCCAATCTGACCATTTGACTATTAATGACAATGATGTCCGTAATATTGTGCTCTCGTACTTGA
TGCACAATTGTTTCAAAGAAACTGCAGAAACCTTTATCTCTTGCACAGGGATGAAGCAGCCAGCTGATTATCCTGTTGATATTGATAAGAGAAAACGTGAGTGCTACGGATTTGTTTCAAAATTTCTAGTTGTTGCCATGTTATTGAAGTTTAAAGTCTTTCCTAGTTAATTTCTGATGTTTTTAGTCCTTGGCAGCCAA
ACATAAAGAATTACTTTTGACTATTTTATTAACATGTTTGGATTTCAGTTCTAGTCAATGGATTTCTTCTGCCAGGTGATTGATTCATGCTACTATTTCTTTGCATGTTTATTCAGCAATTTACAATTTCGCTTTGGAAGGAAATGCTCTGAGGGCCATAGAACTTACGAACCAGCTTGCCCCTGAACTCCTACAGGAAA
ATAAGGACTTGCATTTTGATCTTTTGAGTATTCATTTTGTTGAGCTTGTCCGCAAGAGGCAGTGCACAGAGGCTTTAGTGTTTGCTCAGAATGAGCTAACATCATTTGGAAAGCAGAACCGATATGTCGAAAAATTAGAAGATTGCATGGCACTTCTAGCTTATGAGGAGCCTGAAAAGTCACCCATGTTTAATCTTTTG
AGTATGGACTATCGGCAAAGTGTAGCTGATTCGCTGAATCGAGCCATCTTGGCGCATGCTAACCTGCCTAGCTACACATCCATGGAAAGGCTTATACAGCAAACAACAGTTGTGAGACAATGGCTGCATCAAGAAATTGGGAAGGATGGGCCTCCTCTCTTTTCATTGCCCGCATTTCTGAAGAATTAGACACATGAAGG
GTACACAACAGAATATATGTTCATCATTCAGAGCCTACTTATCTAATCAAGTACCTGGCCTCTGTATGTATTACGAATGGTCATTGTTAAAGTCTATTGAAACTCTTGTATTAGGTTGGGAGTATAAAGGCTCGCCTGTTGTCGAGCAATTCTATTTTTAAAGTATCAATTCATTCATTTTTCCGTTCCACAGCATTTTT
TTTAGCTTCTTGTTAAAAAGGTTAAAAATAGGTAGCTGAGCGGCCTTTGTACATGGATATAATTCATTATGGTAGTTTCTCTTTGGATTGACTATGAAGAATGCATTACGTTGTTTGACATCTTTGAGCAGGGAATGCATATTTTCTGCACTTTTGTAAACAAGGTTTCCCGTTTCTTAAATGTTTCGCCT

>TRINITY_DN119157_c0_g1_i6 from sample A1 / Example unspliced isoform:

CAAAACTTTCAACAACCGGCTTTAGCCGGGTTACGCAGGATCCTATCAAATGTATGACAAATATGTGCGATAAAAAAAAAGTCAATGTATTATTTTTGTTAAGATCGAAACTGCTTGTGTGATCTGCGTAGAGATGAGAAAGTGAAGTCGTTTTTTAACGAAAAAATAGCAGGCGTTGAAGAGGTCGAATCCCGTGATCG
TTCTTATCAACACCAGTCATGCAGAGCAATAAGACTATTAATGACAATGATGTCCGTAATATTGTGCTCTCGTACTTGATGCACAATTGTTTCAAAGAAACTGCAGAAACCTTTATCTCTTGCACAGGGATGAAGCAGCCAGCTGATTATCCTGTTGATATTGATAAGAGAAAACCAATTTACAATTTCGCTTTGGAAGG
AAATGCTCTGAGGGCCATAGAACTTACGAACCAGCTTGCCCCTGAACTCCTACAGGAAAATAAGGACTTGCATTTTGATCTTTTGAGTATTCATTTTGTTGAGCTTGTCCGCAAGAGGCAGTGgtatgattttacacaacttttagtttgttatctatgcattatttttgaacagataaaactttaagatagatgtcagg
tgaactgtagggagagtaggacattttacgtacatatcccattttgaaagaaattaagtattctgtttgttccgataacagCACAGAGGCTTTAGTGTTTGACGTACATATCCCATTTTGAAAGAAATTAAGTATTCTGTTTGTTCCGATAACAGCACAGAGGCTTTAGTGTTTGACGTACATATCCCATTTTGAAAG

Intron 2 GTAAGTATTT ... AGTTTTGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	33.33	12	4	8
A2	27.03	27	8	12
A3	30.77	9	2	6
A4	33.33	17	9	8
A5	23.12	8	1.9	3
A6	17.83	129	9	47
A7	20.02	95	20.6	27
A8	18.52	88	12	28
A9	22.55	66	6.4	32
A10	17.19	53	7	15

>TRINITY_DN42889_c0_g1_i2 from sample A8 / Example spliced isoform

CAACAACCGGCTTTAGCCGGGTTACGCAGGATCCTATCAAATGTATGACAAATATGTGCGATAAAAAAAAAGTCAATGTATTATTTTTGTTAAGATCGAAACTGCTTGTGTGATCTGCGTAGAGATGAGAAAGTGAAGTCGTTTTTTAACGAAAAAATAGCAGGCGTTGAAGAGGTCGAATCCCGTGATCGTTCTTATCA
ACACCAGTCATGCAGAGCAATAAGACTATTAATGACAATGATGTCCGTAATATTGTGCTCTCGTACTTGATGCACAATTGTTTCAAAGAAACTGCAGAAACCTTTATCTCTTGCACAGGGATGAAGCAGCCAGCTGATTATCCTGTTGATATTGATAAGAGAAAACCAATTTACAATTTCGCTTTGGAAGGAAATGCTCT
GAGGGCCATAGAACTTACGAACCAGCTTGCCCCTGAACTCCTACAGGAAAATAAGGACTTGCATTTTGATCTTTTGAGCATTCATTTTGTTGAGCTTGTCCGCAAGAGGCAGTGCACAGAGGCTTTAGTGTTTGCTCAGAATGAGCTAACATCATTTGGAAAGCAGAACCGATATGTCGAAAAATTAGAAGATTGCATGG
CACTTCTAGCTTATGAGGAGCCTGAAAAGTCACCCATGTTTTATCTTTTGAGTATGGACTATCGGCAAAGTGTAGCTGATTCGCTGAATCGAGCCATCTTGGCGCATGCTAACCTGCCTAGCTACACATCCATGGAAAGGCTTATACAGCAAACAACAGTTGTGAGACAATGGCTGCATCAAGAAATTGGGAAGGATGGG
CCTCCTCTCTTTTCATTGCCCGCATTTCTGAAGAATTAGACGCATGAAGGGTACACAACAGAATATATGTTCATCATTCAGAGCCTACTTATCTAATCAAGTACCTGGCCTCTGTATGTATTACGAATGGTCATTGTTAAAGTCTATTGAAACTCTTGTATTAGGTTGGGAGTATAAAGGCTCGCCTGTTGTCGAGCAAT
TCTATTTTTAAAGTATCAATTCATTCATTTTTCCGTTCCACAGCATTTTTTTTAGCTTCTTGTTAAAAAGGTTAAAAATAGGTAGCTGAGTGGCCTTTGTACATGGATATAATTCATTATGGTAGTTTCTCTTTGGATTGACTATGAAGAATGCATTACGTTGTTTGACATCTTTCAGCAGGGAATGCATATTTTCTGCA
CTTTTGTAAACAAGGTTTCCCGTTTCTTAAATGTTTCGCTTGTCAATTTTGTTGCTGACATTTCCTTGAGGGTTGGCCTTGTATATAAATTCAAGAAGTTGGGACCTGGGTAATAAACCCAAGCTTGCATCTTCATAATATATCCGCTCAGCGAGGATACTTTTGAGTGTTGAGATAAACACCAAAGCAATTGTAGGGGA
TTACTGCTTTAGTTTGCAACTTCTAAATATTTTAGGCTAAAAGTTATGGAATGGGTCAAAGTAACCCTCGTCGTATGTCTTAGGAAAATATATAGGATCACGTACGCGGATTGAGTAGAAACAACTGG

>TRINITY_DN42889_c0_g1_i3 from sample A8 / Example unspliced isoform:

GGATGAAGCAGCCAGCTGATTATCCTGTTGATATTGATAAGAGAAAACCAATTTACAATTTCGCTTTGGAAGGAAATGCTCTGAGGGCCATAGAACTTACGAACCAGCTTGCCCCTGAACTCCTACAGGAAAATAAGGACTTGCATTTTGATCTTTTGAGCATTCATTTTGTTGAGCTTGTCCGCAAGAGGCAGTGCACA
GAGGCTTTAGTGTTTGCTCAGAATGAGCTAACATCATTTGGAAAGCAGAACAGATATGTCGAAAAATTAGAAgtaagtatttgtttcatctgacttagtcatgtatttttgagtaagatgaagacatttgctgcatacctgtagatagccatattctgcattatatttcatatacaatcatacaaaaacaaaaattaaac
tcacatcccccagttatatctgtacagtcctccaaaatctatggtacctaaagctggaaatcatgaaggtttacggaatgggtttagtttctgaaatggtcattttcaaaatgtcaatgaggaaaagttgaagtcaggatttcccatttagatataaacaattctacaagagaattggacataaaatattgtagactcta
gcataagctttgtcttatttttttttgaagtgttctttagtcctcataagtcagccccctagaggctggaaaggttgccaatggcggattctatggaaatgccccaattgtggattcattatggtccagaaggtgtttctggtagcattgttcaaacattttataagattcacaaagctacattcagaggtgtactatgg
ttgtggtcaaacaatttttgtacttaagtgaaatatcatgttgctcacttgttagagtgattttcctagttttgcagGATTGCATGGCACTTCTAGCTTATGAGGAGCCTGAAAAGTCACCCATGTTTTATCTTTTGAGTATGGACTATCGGCAAAGTGTAGCTGATTCGCTGAATCGAGCCATCTTGGCGCATGCTAAC
CTGCCTAGCTACACATCCATGGAAAGGCTTATACAGCAAACAACAGTTGTGAGACAATGGCTGCATCAAGAAATTGGGAAGGATGGGCCTCCTCTCTTTTCATTGCCCGCATTTCTGAAGAATTAGACGCATGAAGGGTACACAACAGAATATATGTTCATCATTCAGAGCCTACTTATCTAATCAAGTACCTGGCCTCT
GTATGTATTACGAATGGTCATTGTTAAAGTCTATTGAAACTCTTGTATTAGGTTGGGAGTATAAAGGCTCGCCTGTTGTCGAGCAATTCTATTTTTAAAGTATCAATTCATTCATTTTTCCGTTCCACAGCATTTTTTTTAGCTTCTTGTTAAAAAGGTTAAAAATAGGTAGCTGAGTGGCCTTTGTACATGGATATAAT
TCATTATGGTAGTTTCTCTTTGGATTGACTATGAAGAATGCATTACGTTGTTTGACATCTTTCAGCAGGGAATGCATATTTTCTGCACTTTTGTAAACAAGGTTTCCCGTTTCTTAAATGTTTCGCTTGTCAATTTTGTTGCTGACATTTCCTTGAGGGTTGGCCTTGTATATAAATTCAAGAAGTTGGGACCTGGGTAA
TAAACCCAAGCTTGCATCTTCATAATATATCCGCTCAGCGAGGATACTTTTGAGTGTTGAGATAAACACCAAAGCAATTGTAGGGGATTACTGCTTTAGTTTGCAACTTCTAAATATTTTAGGCTAAAAGTTATGGAATGGGTCAAAGTAACCCTCGTCGTATGTCTTAGGAAAATATATAGGATCACGTACGCGGATTG
AGTAGAAACAACTGG

Intron 3 GTGAGTGCTA ... GTTTATTCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	12.9	27	3	5
A2	6.67	21	2	1
A3	20	22	8	3
A4	10	18	1	3
A5	29.41	6	3	2
A6	12.57	73	16	5
A7	9.64	75	9	7
A8	14.06	55	9	9
A9	12.43	81	12	11
A10	13.55	67	13	8

>TRINITY_DN119157_c0_g1_i6 from sample A1 / Example spliced isoform

CAAAACTTTCAACAACCGGCTTTAGCCGGGTTACGCAGGATCCTATCAAATGTATGACAAATATGTGCGATAAAAAAAAAGTCAATGTATTATTTTTGTTAAGATCGAAACTGCTTGTGTGATCTGCGTAGAGATGAGAAAGTGAAGTCGTTTTTTAACGAAAAAATAGCAGGCGTTGAAGAGGTCGAATCCCGTGATCG
TTCTTATCAACACCAGTCATGCAGAGCAATAAGACTATTAATGACAATGATGTCCGTAATATTGTGCTCTCGTACTTGATGCACAATTGTTTCAAAGAAACTGCAGAAACCTTTATCTCTTGCACAGGGATGAAGCAGCCAGCTGATTATCCTGTTGATATTGATAAGAGAAAACCAATTTACAATTTCGCTTTGGAAGG
AAATGCTCTGAGGGCCATAGAACTTACGAACCAGCTTGCCCCTGAACTCCTACAGGAAAATAAGGACTTGCATTTTGATCTTTTGAGTATTCATTTTGTTGAGCTTGTCCGCAAGAGGCAGTGGTATGATTTTACACAACTTTTAGTTTGTTATCTATGCATTATTTTTGAACAGATAAAACTTTAAGATAGATGTCAGG
TGAACTGTAGGGAGAGTAGGACATTTTACGTACATATCCCATTTTGAAAGAAATTAAGTATTCTGTTTGTTCCGATAACAGCACAGAGGCTTTAGTGTTTGACGTACATATCCCATTTTGAAAGAAATTAAGTATTCTGTTTGTTCCGATAACAGCACAGAGGCTTTAGTGTTTGACGTACATATCCCATTTTGAAAG

>TRINITY_DN119157_c0_g1_i7 from sample A1 / Example unspliced isoform:

CAAAACTTTCAACAACCGGCTTTAGCCGGGTTACGCAGGATCCTATCAAATGTATGACAAATATGTGCGATAAAAAAAAAGTCAATGTATTATTTTTGTTAAGATCGAAACTGCTTGTGTGATCTGCGTAGAGATGAGAAAGTGAAGTCGTTTTTTAACGAAAAAATAGCAGGCGTTGAAGAGGTCGAATCCCGTGATCG
TTCTTATCAACACCAGTCATGCAGAGCAATAAGGTCAATTTGGTAATTCGTTAATGCCGAGAGAATTTTGGGCTTATAGTGGCTAATTGTGGTTTACTGGACCGGCAAATTAGTGTCTGGGATGGACGTAGATCCTCGCCAATCTGACCATTTGACTATTAATGACAATGATGTCCGTAATATTGTGCTCTCGTACTTGA
TGCACAATTGTTTCAAAGAAACTGCAGAAACCTTTATCTCTTGCACAGGGATGAAGCAGCCAGCTGATTATCCTGTTGATATTGATAAGAGAAAACgtgagtgctacggatttgtttcaaaatttctagttgttgccatgttattgaagtttaaagtctttcctagttaatttctgatgtttttagtccttggcagccaa
acataaagaattacttttgactattttattaacatgtttggatttcagttctagtcaatggatttcttctgccaggtgattgattcatgctactatttctttgcatgtttattcagCAATTTACAATTTCGCTTTGGAAGGAAATGCTCTGAGGGCCATAGAACTTACGAACCAGCTTGCCCCTGAACTCCTACAGGAAA
ATAAGGACTTGCATTTTGATCTTTTGAGTATTCATTTTGTTGAGCTTGTCCGCAAGAGGCAGTGCACAGAGGCTTTAGTGTTTGCTCAGAATGAGCTAACATCATTTGGAAAGCAGAACCGATATGTCGAAAAATTAGAAGATTGCATGGCACTTCTAGCTTATGAGGAGCCTGAAAAGTCACCCATGTTTAATCTTTTG
AGTATGGACTATCGGCAAAGTGTAGCTGATTCGCTGAATCGAGCCATCTTGGCGCATGCTAACCTGCCTAGCTACACATCCATGGAAAGGCTTATACAGCAAACAACAGTTGTGAGACAATGGCTGCATCAAGAAATTGGGAAGGATGGGCCTCCTCTCTTTTCATTGCCCGCATTTCTGAAGAATTAGACACATGAAGG
GTACACAACAGAATATATGTTCATCATTCAGAGCCTACTTATCTAATCAAGTACCTGGCCTCTGTATGTATTACGAATGGTCATTGTTAAAGTCTATTGAAACTCTTGTATTAGGTTGGGAGTATAAAGGCTCGCCTGTTGTCGAGCAATTCTATTTTTAAAGTATCAATTCATTCATTTTTCCGTTCCACAGCATTTTT
TTTAGCTTCTTGTTAAAAAGGTTAAAAATAGGTAGCTGAGCGGCCTTTGTACATGGATATAATTCATTATGGTAGTTTCTCTTTGGATTGACTATGAAGAATGCATTACGTTGTTTGACATCTTTGAGCAGGGAATGCATATTTTCTGCACTTTTGTAAACAAGGTTTCCCGTTTCTTAAATGTTTCGCCT

Intron 4 GTATTAAACA ... TTTGTTTCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	29.73	26	11	4.3
A2	25.54	23.3	8	3.7
A3	19.23	21	5	3.7
A4	37.25	32	19	12
A5	40	18	12	7.3
A6	23.08	80	24	12.7
A7	31.19	75	34	3
A8	24.36	59	19	6
A9	26.27	87	31	5.3
A10	20	60	15	8.3

>TRINITY_DN100572_c0_g1_i7 from sample A4 / Example spliced isoform

CTTTCAACAACCGGCTTTAGCCGGGTTACGCAGGATCCTATCAAATGTATGACAAATATGTGCGATAAAAAAAAAGTCAATGTATTATTTTTGTTAAGATCGAAACTGCTTGTGTGATCTGCGTAGAGATGAGAAAGTGAAGTCGTTTTTTAACGAAAAAATAGCAGGCGTTGAAGAGGTCGAATCCCGTGATCGTTCTT
ATCAACACCAGTCATGCAGAGCAATAAGGTCAATTTGGTAATCCGTTAATGCCGAAAGAATTTTGGGCTTATAGTGGCTAATTGTGTTTTACTGGACCGGCAAATTAGTGTCTGGGATGGACGTAGATCCTCGCCAATCTGACCATTTGGTATGTTAAATATAAACATCTTACACTGTCTTCTGTCCAGTTAGGTTTTGG
CCAATACGGGTTTAACGGCATGGTTTAGTTGGATGAGGGCTTAGATTGGGCACTGGCATATTTATTGGTCAAGATTTGAGGGTACTTTGATACGGATATAATCCAGTTTGTATGTGCATTTATGCTATTTGGTAATACCCACATCCATCCTTATTTAAAAGCAACAGTGTTAAAATTCTCCCAGTTCAATGTGAAAGAGG
ATGAATAGTTATGTTGATGAATAGTTATGTTGGTGCTTGTAATTTGGTCTATAGAATGTAGTGAACTGGCTCCACTGGCTCAATCCAAGGTTGTAGTTGAAGCGACTAGGGGATTAAAACTGAAATCTATAGAATGCCCAACAACTCACGCATCTGTGAATGTTTGAAATCCAAGCGGTTTATCGCTGGATATGCGTATC
GAACGCCGATCTCGGACTTCGTGGGAACCGCT

>TRINITY_DN100572_c0_g1_i6 from sample A4 / Example unspliced isoform:

CTTTCAACAACCGGCTTTAGCCGGGTTACGCAGGATCCTATCAAATGTATGACAAATATGTGCGATAAAAAAAAAGTCAATGTATTATTTTTGTTAAGATCGAAACTGCTTGTGTGATCTGCGTAGAGATGAGAAAGTGAAGTCGTTTTTTAACGAAAAAATAGCAGGCGTTGAAGAGGTCGAATCCCGTGATCGTTCTT
ATCAACACCAGTCATGCAGAGCAATAAGgtattaaacacacttgtagacctcagaaattctgttactgtacaaattcatgccattcattcatggaaaacgagtaaacttgtttctttttcgtattttttccacttttgtttcagGTCAATTTGGTAATCCGTTAATGCCGAAAGAATTTTGGGCTTATAGTGGCTAATTG
TGTTTTACTGGACCGGCAAATTAGTGTCTGGGATGGACGTAGATCCTCGCCAATCTGACCATTTGGTATGTTAAATATAAACATCTTACACTGTCTTCTGTCCAGTTAGGTTTTGGCCAATACGGGTTTAACGGCATGGTTTAGTTGGATGAGGGCTTAGATTGGGCACTGGCATATTTATTGGTCAAGATTTGAGGGTA
CTTTGATACGGATATAATCCAGTTTGTATGTGCATTTATGCTATTTGGTAATACCCACATCCATCCTTATTTAAAAGCAACAGTGTTAAAATTCTCCCAGTTCAATGTGAAAGAGGATGAATAGTTATGTTGATGAATAGTTATGTTGGTGCTTGTAATTTGGTCTATAGAATGTAGTGAACTGGCTCCACTGGCTCAAT
CCAAGGTTGTAGTTGAAGCGACTAGGGGATTAAAACTGAAATCTATAGAATGCCCAACAACTCACGCATCTGTGAATGTTTGAAATCCAAGCGGTTTATCGCTGGATATGCGTATCGAACGCCGATCTCGGACTTCGTGGGAACCGCT

Intron 5 GTAAGTATTT ... AGTTTTGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	40	12	3	8
A2	30.77	27	0	12
A3	40	9	2	6
A4	32	17	1	8
A5	27.27	8	0	3
A6	26.29	129	0	46
A7	22.13	95	2	27
A8	24.35	87	0	28
A9	32.65	66	0	32
A10	22.06	53	1	15

>TRINITY_DN44440_c0_g1_i2 from sample A7 / Example spliced isoform

AAACTTTCAACAACCGGCTTTAGCCGGGTTACGCAGGATCCTATCAAATGTATGACAAATATGTGCGATAAAAAAAAAGTCAATGTATTATTTTTGTTAAGATCGAAACTGCTTGTGTGATCTGCGTAGAGATGAGAAAGTGAAGTCGTTTTTTAACGAAAAAATAGCAGGCGTTGAAGAGGTCGAATCCCGTGATCGTT
CTTATCAACACCAGTCATGCAGAGCAATAAGACTATTAATGACAATGATGTCCGTAATATTGTGCTCTCGTACTTGATGCACAATTGTTTCAAAGAAACTGCAGAAACCTTTATCTCTTGCACAGGGATGAAGCAGCCAGCTGATTATCCTGTTGATATTGATAAGAGAAAACCAATTTACAATTTCGCTTTGGAAGGAA
ATGCTCTGAGGGCCATAGAACTTACGAACCAGCTTGCCCCTGAACTCCTACAGGAAAATAAGGACTTGCATTTTGATCTTTTGAGCATTCATTTTGTTGAGCTTGTCCGCAAGAGGCAGTGCACAGAGGCTTTAGTGTTTGCTCAGAATGAGCTAACATCATTTGGAAAGCAGAACAGATATGTCGAAAAATTAGAAGAT
TGCATGGCACTTCTAGCTTATGAGGAGCCTGAAAAGTCACCCATGTTTAATCTTTTGAGTATGGACTATCGGCAAAGTGTAGCTGATTCGCTGAATCGAGCCATCTTGGCGCATGCTAACCTGCCTAGCTACACATCCATGGAAAGGCTTATACAGCAAACAACAGTTGTGAGACAATGGCTGCATCAAGAAATTGGGAA
GGATGGGCCTCCTCTCTTTTCATTGCCCGCATTTCTGAAGAATTAGACGCATGAAGGGTACACAACAGAATATATGTTCATCATTCAGAGCCTACTTATCTAATCAAGTACCTGGCCTCTGTATGTATTACGAATGGTCATTGTTAAAGTCTATTGAAACTCTTGTATTAGGTTGGGAGTATAAAGGCTCGCCTGTTGTC
GAGCAATTCTATTTTTAAAGTATCAATTCATTCATTTTTCCGTTCCACAGCATTTTTTTTAGCTTCTTGTTAAAAAGGTTAAAAATAGGTAGCTGAGCGGCCTTTGTACATGGATATAATTCATTATGGTAGTTTCTCTTTGGATTGACTATGAAGAATGCATTACGTTGTTTGACATCTTTCAGCAGGGAATGCATATT
TTCTGCACTTTTGTAAACAAGGTTTCCCGTTTCTTAAATGTTTCGCTTGTCAATTTTGTTTCTGACATTTCCTTGCGGGTTGGCCTTGTATATAAATTCAAGAAGTTGGGACCTGGGTAATAAACCCAAGCTTGCATCTTCATAATATATCCGCTCAGCGAGGATACTTTTGAGTGTTGAGATAAACACCAAAGCAATTG
TAGGGGATTACTGCTTTAGTTTGCAACTTCTAAATATTTTAGGCTAAAAGTTAAGGAATGGGTCAAAGTAACCCTCGTCCTATGTCTTAGGAAAATATATAGGATCACGTACGCGGATTGAGTAGAAACAACTGGAATCTATTATTGTCTTTCGTTTTTTCTCTTCTTGTGGCCACATTCCTAGATGATATTGGGTAGCA
GCTAATGATATGAACGTGGAAAGAGTGTCAAGGTTGATCCATTGACACTTCTAAACACAAAGCAAACCTTACCATAATTGGTTTCCAAGGCATC

>TRINITY_DN44440_c0_g1_i1 from sample A7 / Example unspliced isoform:

CAGATATGTCGAAAAATTAGAAgtaagtatttgtttcatctgacttagtcatgtatttttgagtaagatgaagacatttgctgcatacctgtagatagccatattctgcattatatttcatatacaatcatacaaaaacaaaaattaaactcacatcccccagttatatctgtacagtcctccaaaatctatggtaccta
aagctggaaatcatgaaggtttacggaatgggtttagtttctgaaatggtcattttcaaaatgtcaatgaggaaaagttgaagtcaggatttcccattttgatataaacaattctacaagagaattggacataaaatattgtagactctagcataagctttgtcttatttttttttgaagtgttctttagtcctcataag
tcagcccctagaggctggaaaggttgccaatggcggattctatggaaatgccccaattgtggattcattatggtccagaaggtgtttctggtagcattgttcaaacattttataagattcacaaagctacattcagaggtgtactatggttgtggtcaaacaatttttgtacttgaagtgaaaaatcatgttgctcactt
gttagagtgattttcctagttttgcagGATTGCATGGCACTTCTAGCTTATGAGGAGCCTGAAAAGTCACCCATGTTTAATCTTTTGAGTATGGACTATCGGCAAAGTGTAGCTGATTCGCTGAATCGAGCCATCTTGGCGCATGCTAACCTGCCTAGCTACACATCCATGGAAAGGCTTATACAGCAAACAACAGTTGT
GAGACAATGGCTGCATCAAGAAATTGGGAAGGATGGGCCTCCTCTCTTTTCATTGCCCGCATTTCTGAAGAATTAGACGCATGAAGGGTACACAACAGAATATATGTTCATCATTCAGAGCCTACTTATCTAATCAAGTACCTGGCCTCTGTATGTATTACGAATGGTCATTGTTAAAGTCTATTGAAACTCTTGTATTA
GGTTGGGAGTATAAAGGCTCGCCTGTTGTCGAGCAATTCTATTTTTAAAGTATCAATTCATTCATTTTTCCGTTCCACAGCATTTTTTTTAGCTTCTTGTTAAAAAGGTTAAAAATAGGTAGCTGAGCGGCCTTTGTACATGGATATAATTCATTATGGTAGTTTCTCTTTGGATTGACTATGAAGAATGCATTACGTTG
TTTGACATCTTTCAGCAGGGAATGCATATTTTCTGCACTTTTGTAAACAAGGTTTCCCGTTTCTTAAATGTTTCGCTTGTCAATTTTGTTTCTGACATTTCCTTGCGGGTTGGCCTTGTATATAAATTCAAGAAGTTGGGACCTGGGTAATAAACCCAAGCTTGCATCTTCATAATATATCCGCTCAGCGAGGATACTTT
TGAGTGTTGAGATAAACACCAAAGCAATTGTAGGGGATTACTGCTTTAGTTTGCAACTTCTAAATATTTTAGGCTAAAAGTTAAGGAATGGGTCAAAGTAACCCTCGTCCTATGTCTTAGGAAAATATATAGGATCACGTACGCGGATTGAGTAGAAACAACTGGAATCTATTATTGTCTTTCGTTTTTTCTCTTCTTGT
GGCCACATTCCTAGATGATATTGGGTAGCAGCTAATGATATGAACGTGGAAAGAGTGTCAAGGTTGATCCATTGACACTTCTAAACACAAAGCAAACCTTACCATAATTGGTTTCCAAGGCATC