sp|B6SHG7|TRMB_MAIZE ----> tRNA (guanine-N(7)-)-methyltransferase
Intron 1 GTTCATGAGC ... TTTGTTATAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 73.53 | 9 | 27 | 23 |
| A2 | 64 | 9 | 19 | 13 |
| A3 | 66.67 | 9 | 19 | 17 |
| A4 | 72.73 | 3 | 8 | 8 |
| A5 | 80 | 3 | 11 | 13 |
| A6 | 65.88 | 29 | 61 | 51 |
| A7 | 70.71 | 29 | 78 | 62 |
| A8 | 64 | 27 | 50 | 46 |
| A9 | 72.48 | 30 | 79 | 79 |
| A10 | 61.19 | 39 | 71 | 52 |
>TRINITY_DN99420_c0_g1_i6 from sample A3 / Example spliced isoformCTTGGAACGAGGTCAAGGAATGTGGACTTCATTTCCACCTCCAATTTTCACCAACTTTCTCGATTCTTAACATATTTTGCCCAATAATCTCTGATGACATGCTGAGCTTTGTTGTAAAAGTGTGCGCGGAGAGGATCCGTGCGCCCCAAGAGTTCATGGACGAAAATTTCATACACACAAGCTTTTCAGCGTCAAATACA
GTGTAAAGGATTCCTCCCACTGCTATCCCATTCGCATGCTGTGCAAGCAATGGCAGAGTGATCGAGGAACAGGCAAACATCTTCCGCAGTTGCTCTCTTTTCTCAAAATAAATTCGAATGAAATTCCTGGAAATGGTTCTGATCGCAAACATCTTCCGCAGTTGCTCTCTTTTCTCAAAATAAATTCGAATGAAATTCCT
GGAAATGGTTCTGATCGCAGACATGTTTTGATATTGGGCGTGCCAATATCCTTTCTATAACCTATTGAGTTTATACCTTGTCATGGGGCTCCATCCCGAAACAGCGTAGCTTACCTACCAATTTTCGACCAAATTGAGCCGTGGAACCTTTAGGAGTTCCACCCTATTTTTATGCAATGACGGACACTATTCAACATTCC
GGCCAAGCTAGTGATAGTGCTTCAAAGATGGTGGCATTGGATTCGGAGAAAATGGGAGAGGTTGAAGGTTTCGAAGCTAGGTCTATTTCTTACAAAACTTCCGAGGAACCATTGGAAAAACGTCTCAAACCAAACACAGAAAACCCAACTACAGAAGAAGCAATTCAGGTGTCTCAGGAAGTCACAAGCTTTAAGGATGC
TTGTACAAGCACTGGGGCTCAGGCGGCTGTATCGCTTTCCTTGTGTCCAGAGATTTTCTCAAACCCGGGCATGACCAATATATTTACCGACATGCAAATGGGTTGTGCGTGATCGGTCTGGCGTCCACGCATGTCGCTCTTGGAGATAAACCGCAAATTAAAGCTGTGGACTTCAACGTTGGAAAGTCAAGTCGCAGCGA
TATGAAGGTTTCTGGAAAGCGGAAAAAGAATGCTCATGTTTTGGAGGCTAATTCAGCTCTTTGTAAAGTAGTTTCAAATGACACATTTTACATTGTCAGATGCTGTGTTAAAGGTTCTCTTCTTGAAGTTAATGAGAGACTTATTAAGGAACCTGAGCTACTGAATACATCTGGTTCTAGTGAAGGGTATATTGCTATCA
TGATGCCAAGACCTGATGATTGGCTCAAAGCCAAAAGTTCTTTCCTTAGTCGAGAAGAATACAAGAAACACAGAGGCTTGTGCTAGATTTTATTATTAATTACTGTTTTAGTGTGCCAGTTACTCAATACATCAGTAACTAGCATGTATCGAGTACATCACATGAATTTGCAGATATGAGAATGAATTTTGCCATATAAA
TGTTGCTTTGGAAAAAGGCCAAAGTTCATAAAAAATTACTCCTAAAATGTATGGAGGACTTGAACCCCTGACATGGTATGGTGAGCGACTTGCCACAATTTTCGCTTCTTTGAATTCATCTTACCACAATTTTCATTTCTTTGCATTTACTTCCTAGTTATTATCAAATTTCTCTCCTGAAGATGCTTAAAGCAACAATT
CATACTCTGAAGTACTCGTG
>TRINITY_DN99420_c0_g1_i2 from sample A3 / Example unspliced isoform:CTTGGAACGAGGTCAAGGAATGTGGACTTCATTTCCACCTCCAATTTTCACCAACTTTCTCGATTCTTAACATATTTTGCCCAATAATCTCTGATGACATGCTGAGCTTTGTTGTAAAAGTGTGCGCGGAGAGGATCCGTGCGCCCCAAGAGTTCATGGACGAAAATTTCATACACACAAGCTTTTCAGCGTCAAATACA
GTGTAAAGGATTCCTCCCACTGCTATCCCATTCGCATGCTGTGCAAGCAATGGCAGAGTGATCGAGGAACAGGCAAACATCTTCCGCAGTTGCTCTCTTTTCTCAAAATAAATTCGAATGAAATTCCTGGAAATGGTTCTGATCGCAAACATCTTCCGCAGTTGCTCTCTTTTCTCAAAATAAATTCGAATGAAATTCCT
GGAAATGGTTCTGATCGCAGACATGTTTTGATATTGGGCGTGCCAATATCCTTTCTATAACCTATTGAGTTTATACCTTGTCATGGGGCTCCATCCCGAAACAGCGTGAGCTTCCGCTCTGTAGCTTACCTACCAATTTTCGACCAAATTGAGCCGTGGAACCTTTAGGAGTTCCACCCTATTTTTATGCAATGACGGAC
ACTATTCAACATTCCGGCCAAGCTAGTGATAGTGCTTCAAAGATGGTGGCATTGGATTCGGAGAAAATGGGAGAGGTTGAAGGTTTCGAAGCTAGGTCTATTTCTTACAAAACTTCCGAGGAACCATTGGAAAAACGTCTCAAACCAAACACAGAAAACCCAACTACAGAAGAAGCAATTCAGGTGTCTCAGGAAGTCAC
AAGCTTTAAGGATGCTTGTACAAGCACTGGGGCTCAGGCGGCTGTATCGCTTTCCTTGTGTCCAGAGgttcatgagcttcctctacgtcctcctcctgcaatagaatcaaactatgttcaatattttgttatagATTTTCTCAAACCCGGGCATGACCAATATATTTACCGACATGCAAATGGGTTGTGCGTGATCGGTC
TGGCGTCCACGCATGTCGCTCTTGGAGATAAACCGCAAATTAAAGCTGTGGACTTCAACGTTGGAAAGTCAAGTCGCAGCGATATGAAGGTTTCTGGAAAGCGGAAAAAGAATGCTCATGTTTTGGAGGCTAATTCAGCTCTTTGTAAAGTAGTTTCAAATGACACATTTTACATTGTCAGATGCTGTGTTAAAGGTTCT
CTTCTTGAAGTTAATGAGAGACTTATTAAGGAACCTGAGCTACTGAATACATCTGGTTCTAGTGAAGGGTATATTGCTATCATGATGCCAAGACCTGATGATTGGCTCAAAGCCAAAAGTTCTTTCCTTAGTCGAGAAGAATACAAGAAACACAGAGGCTTGTGCTAGATTTTATTATTAATTACTGTTTTAGTGTGCCA
GTTACTCAATACATCAGTAACTAGCATGTATCGAGTACATCACATGAATTTGCAGATATGAGAATGAATTTTGCCATATAAATGTTGCTTTGGAAAAAGGCCAAAGTTCATAAAAAATTACTCCTAAAATGTATGGAGGACTTGAACCCCTGACATGGTATGGTGAGCGACTTGCCACAATTTTCGCTTCTTTGAATTCA
TCTTACCACAATTTTCATTTCTTTGCATTTACTTCCTAGTTATTATCAAATTTCTCTCCTGAAGATGCTTAAAGCAACAATTCATACTCTGAAGTACTCGTG
Intron 2 GCAAACATCT ... TCTTCCGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 50.78 | 29.2 | 36 | 17 |
| A2 | 51.45 | 32.4 | 42 | 18 |
| A3 | 53.83 | 31 | 44 | 17 |
| A4 | 59.83 | 16.4 | 22 | 26 |
| A5 | 53.45 | 9.8 | 14 | 5 |
| A6 | 48.7 | 40 | 42 | 27 |
| A7 | 50.69 | 65 | 69 | 54 |
| A8 | 62.68 | 19.6 | 31 | 31 |
| A9 | 54.85 | 53.8 | 75 | 40 |
| A10 | 56.6 | 53.6 | 66 | 66 |
>TRINITY_DN37639_c0_g1_i2 from sample A7 / Example spliced isoformTGCAAAGTTCGTAGGGTTTTTTTTCCTTGGAACGAGGTCAAGGAATGTGGACTTCATTTCCACCTCCAATTTTCACCAACTTTCTCGATTCTTAACATATTTTGCCCAATAATCTCTGATGACATGCTGAGCTTTGTTGTAAAAGTGTGCGCGGAGAGGATCCGTGCGCCCCAAGAGTTCATGGACGAAAATTTCATACA
CACAAGCTTTTCAGCGTCAAATACAGTGTAAAGGATTCCTCCCACTGCTATCCCATTCGCATGCTGTGCAAGCAATGGCAGAGTGATCGAGGAACAGTTGCTCTCTTTTTTCAAAATAAATTCGAATGAAATTCCTGGAAATGGTTCTGATCGCAGACATGTTTTGATATTGGGCGTGCCAATATCCTTTCTATAACCTA
TTGAGTTTATACCTTGTCATGGGGCTCCATCCCGAAACAGCGTAGCTTACCTACCAATTTTCGACCAAATTGAGCCGTGGAACCTTTAGGAGTTCCACCCTATTTTTATGCAATGACGGACACTATTCAACATTCCGGCCAAGCTAGTGATAGTGCTTCAAAGATGGTGGCATTGGATTCGGAGAAAATGGGAGAGGTTG
AAGGTTTCGAAGCTAGGTCTATTTCTTACAAAACTTCCGAGGAACCATTGGAAAAACGTCTCAAACCAAACACAGAAAACCCAACTACAGAAGAAGCAATTCAGGTGTCTCAGGAAGTCACAAGCTTTAAGGATGCTTGTACAAGCACTGGGGCTCAGGCGGCTGTATCGCTTTCCTTGTGTCCAGAGGTTCATGAGCTT
CCTCTACGTCCTCCTCCTGCAATAGAATCAAACTATGTTCAATATTTTGTTATAGATTTTCTCAAACCCGGGCATGACCAATATATTTACCGACATGCAAATGGGTTGTGCGTGATCGGTCTGGCGTCCACGCATGTCGCTCTTGGAGATAAACCGCAAATTAAAGCTGTGGACTTCAACGTTGGAAAGTCAAGTCGCAG
CGATATGAAGGTTTCTGGAAAGCGGAAAAAGAATGCTCATGTTTTGGAGGCTAATTCAGCTCTTTGTAAAGTAGTTTCAAATGACACATTTTACATTGTCAGATGCTGTGTTAAAGGTTCTCTTCTTGAAGTTAATGAGAGACTTATTAAGGAACCTGAGCTACTGAATACATCTGGTTCTAGTGAAGGGTATATTGCTA
TCATGATGCCAAGACCTGATGATTGGCTCAAAGCCAAAAGTTCTTTCCTTAGTCGAGAAGAATACAAGAAACACAGAGGCTTGTGCTAGATTTTATTATTAATTACTGTTTTAGTGTGCCAGTTACTCAATACATCAGTAACTAGCATGTATCGAGTACATCACATGAATTTGCAGATATGAGAATGAATTTTGCCATAT
AAATGTTGCTTTGGAAAAAGGCCAAAGTTCATAAAAAATTACTCCTAAAATGTATGGAGGACTTGAACCCCTGACATGGTATGGTGAGCGACTTGCCACAATTTTCGCTTCTTTGAATTCATCTTACCACAATTTTCATTTCTTTGCATTTACTTCCTAGTTATTATCAAATTTCTCTCCTGAAGATGCTTAAAGCAACA
ATTCATACTCTGAAGTACTCGTGAATCCATTAGATAAATAGTATGTAGAACAATTTTTTTGGATAATCTTATTTTCTTCCTACTTTGGGAGACCCTTTGCGTGTGCTGTGACAAGTTCATTATTTTAATTGAGTCC
>TRINITY_DN37639_c0_g1_i1 from sample A7 / Example unspliced isoform:GAAATGTTGCAAAGTTCGTAGGGTTTTTTTCCTTGGAACGAGGTCAAGGAATGTGGACTTCATTTCCACCTCCAATTTTCACCAACTTTCTCGATTCTTAACATATTTTGCCCAATAATCTCTGATGACATGCTGAGCTTTGTTGTAAAAGTGTGCGCGGAGAGGATCCGTGCGCCCCAAGAGTTCATGGACGAAAATTT
CATACACACAAGCTTTTCAGCGTCAAATACAGTGTAAAGGATTCCTCCCACTGCTATCCCATTCGCATGCTGTGCAAGCAATGGCAGAGTGATCGAGGAACAGgcaaacatcttccgcagttgctctcttttctcaaaataaattcgaatgaaattcctggaaatggttctgatcgcaaacatcttccgcagTTGCTCTC
TTTTTTCAAAATAAATTCGAATGAAATTCCTGGAAATGGTTCTGATCGCAGACATGTTTTGATATTGGGCGTGCCAATATCCTTTCTATAACCTATTGAGTTTATACCTTGTCATGGGGCTCCATCCCGAAACAGCGTGAGCTTCCGCTCTGTAGCTTACCTACCAATTTTCGACCAAATTGAGCCGTGGAACCTTTAGG
AGTTCCACCCTATTTTTATGCAATGACGGACACTATTCAACATTCCGGCCAAGCTAGTGATAGTGCTTCAAAGATGGTGGCATTGGATTCGGAGAAAATGGGAGAGGTTGAAGGTTTCGAAGCTAGGTCTATTTCTTACAAAACTTCCGAGGAACCATTGGAAAAACGTCTCAAACCAAACACAGAAAACCCAACTACAG
AAGAAGCAATTCAGGTGTCTCAGGAAGTCACAAGCTTTAAGGATGCTTGTACAAGCACTGGGGCTCAGGCGGCTGTATCGCTTTCCTTGTGTCCAGAGGTTCATGAGCTTCCTCTACGTCCTCCTCCTGCAATAGAATCAAACTATGTTCAATATTTTGTTATAGATTTTCTCAAACCCGGGCATGACCAATATATTTAC
CGACATGCAAATGGGTTGTGCGTGATCGGTCTGGCGTCCACGCATGTCGCTCTTGGAGATAAACCGCAAATTAAAGCTGTGGACTTCAACGTTGGAAAGTCAAGTCGCAGCGATATGAAGGTTTCTGGAAAGCGGAAAAAGAATGCTCATGTTTTGGAGGCTAATTCAGCTCTTTGTAAAGTAGTTTCAAATGACACATT
TTACATTGTCAGATGCTGTGTTAAAGGTTCTCTTCTTGAAGTTAATGAGAGACTTATTAAGGAACCTGAGCTACTGAATACATCTGGTTCTAGTGAAGGGTATATTGCTATCATGATGCCAAGACCTGATGATTGGCTCAAAGCCAAAAGTTCTTTCCTTAGTCGAGAAGAATACAAGAAACACAGAGGCTTGTGCTAGA
TTTTATTATTAATTACTGTTTTAGTGTGCCAGTTACTCAATACATCAGTAACTAGCATGTATCGAGTACATCACATGAATTTGCAGATATGAGAATGAATTTTGCCATATAAATGTTGCTTTGGAAAAAGGCCAAAGTTCATAAAAAATTACTCCTAAAATGTATGGAGGACTTGAACCCCTGACATGGTATGGTGAGCG
ACTTGCCACAATTTTCGCTTCTTTGAATTCATCTTACCACAATTTTCATTTCTTTGCATTTACTTCCTAGTTATTATCAAATTTCTCTCCTGAAGATGCTTAAAGCAACAATTCATACTCTGAAGTACTCGTGAATCCATTAGATAAATAGTATGTAGAACAATTTTTTTGGATAATCTTATTTTCTTCCTACTTTGGGA
GACCCTTTGCGTGTGCTGTGACAAGTTCATTATTTTAATTGAGTCC